BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q96LD8 (212 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 2BKQ-A nrPDB 438 e-124 1EUV-A nrPDB 49 2e-06 6DG4-A nrPDB 46 1e-05 2CKH-A nrPDB 35 0.031 5LNB-B nrPDB 34 0.043 6GZU-A nrPDB 32 0.22 5BQN-A nrPDB 30 0.53 5BQM-B nrPDB 30 0.63 3EAY-A nrPDB 28 2.3 4BLB-A nrPDB 28 2.4 4BL8-A nrPDB 28 2.5 4KMH-A nrPDB 28 3.0 4KM8-A nrPDB 28 3.3 1M1L-A nrPDB 28 3.6 4IA5-A nrPDB 27 4.8 4OGP-A nrPDB 27 5.3 >2BKQ-A nrPDB Length = 212 Score = 438 bits (1127), Expect = e-124, Method: Compositional matrix adjust. Identities = 209/212 (98%), Positives = 210/212 (99%) Query: 1 MDPVVLSYMDSLLRQSDVSLLDPPSWLNDHIIGFAFEYFANSQFHDCSDHVSFISPEVTQ 60 MDPVVLSYMDSLLRQSDVSLLDPPSWLNDHIIGFAFEYFANSQFHD SDHVSFISPEVTQ Sbjct: 1 MDPVVLSYMDSLLRQSDVSLLDPPSWLNDHIIGFAFEYFANSQFHDSSDHVSFISPEVTQ 60 Query: 61 FIKCTSNPAEIAMFLEPLDLPNKRVVFLAINDNSNQAAGGTHWSLLVYLQDKNSFFHYDS 120 FIKCTSNPAEIAMFLEPLDLPNKRVVFLAINDNSNQAAGG+HWSLLVYLQDKNSFFHYDS Sbjct: 61 FIKCTSNPAEIAMFLEPLDLPNKRVVFLAINDNSNQAAGGSHWSLLVYLQDKNSFFHYDS 120 Query: 121 HSRSNSVHAKQVAEKLEAFLGRKGDKLAFVEEKAPAQQNSYDCGMYVICNTEALCQNFFR 180 HSRSNSVHAKQVAEKLEAFLGRKGDKLAFVEEKAPAQQNSYDCGMYVICNTEALCQNFFR Sbjct: 121 HSRSNSVHAKQVAEKLEAFLGRKGDKLAFVEEKAPAQQNSYDCGMYVICNTEALCQNFFR 180 Query: 181 QQTESLLQLLTPAYITKKRGEWKDLITTLAKK 212 QQTESLLQLLTPAYITKKRGEWKDLI TLAKK Sbjct: 181 QQTESLLQLLTPAYITKKRGEWKDLIATLAKK 212 >1EUV-A nrPDB Length = 221 Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 63/160 (39%), Gaps = 15/160 (9%) Query: 17 DVSLLDPPSWLNDHIIGFAFEYFANSQFHDCSDHVSFISPEVTQFIKCTSNPAEIAMFLE 76 D L P WLND II F +Y S + V+F S T + M + Sbjct: 39 DFKTLAPRRWLNDTIIEFFMKYIEKS----TPNTVAFNSFFYTNLSERGYQGVRRWMKRK 94 Query: 77 PLDLPNKRVVFLAINDNSNQAAGGTHWSLLVYLQDKNSFFHYDSHSRSNSVHAKQVAEKL 136 + +F IN N +HW+L + K + + DS S + + + L Sbjct: 95 KTQIDKLDKIFTPINLNQ------SHWALGIIDLKKKTIGYVDSLSNGPNAMSFAILTDL 148 Query: 137 EAFLGRK-----GDKLAFVEEKAPAQQNSYDCGMYVICNT 171 + ++ + G+ + P Q N YDCG+YV NT Sbjct: 149 QKYVMEESKHTIGEDFDLIHLDCPQQPNGYDCGIYVCMNT 188 >6DG4-A nrPDB Length = 263 Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 44/180 (24%), Positives = 75/180 (41%), Gaps = 32/180 (17%) Query: 14 RQSDVSLLDPPSWLNDHIIGFAFEYFAN---------SQFHDCSDHVSFISPEVTQFIKC 64 R + LL +WLND++I A Y A+ +Q C+ SF P + Sbjct: 47 RDFEEKLLPATAWLNDNVIIGAIFYIADYVNTKKGAPNQEPKCTAFTSFFWPRL-----L 101 Query: 65 TSNPAEIAMFLEPLDLPNKRVVFLAINDNSNQAAGGTHWSLLVYLQDKNSFFHYDSHSRS 124 + P L ++ ++ FL I+ +HW+L V + + H DS + Sbjct: 102 SHGPGGCGRLLRRANV--RKANFLDIDTILIPICESSHWTLAVIRPGRRTVSHLDSMAAG 159 Query: 125 NSVHAKQVAEKL---------EAFLGRKGDKLAFVEEKAPAQQNSYDCGMYVICNTEALC 175 +++V KL + F+ + + F +AP Q N +DCG++ I N A+C Sbjct: 160 RG--SERVKAKLLELVKFVLEDQFVEAEWQAVDF---QAPRQTNGWDCGVFTITN--AIC 212 >2CKH-A nrPDB Length = 225 Score = 34.7 bits (78), Expect = 0.031, Method: Compositional matrix adjust. Identities = 43/193 (22%), Positives = 75/193 (38%), Gaps = 22/193 (11%) Query: 2 DPVVLSYMDSLLRQSDVSLLDPPSWLNDHIIGFAFEYFANSQFHDCSDHVSFISPEVTQF 61 D V+ + + D+ L+ +WLND II F V + Sbjct: 23 DEVLSEAFRLTITRKDIQTLNHLNWLNDEIINFYMNMLMERSKEKGLPSVHAFNTFFFTK 82 Query: 62 IKCTSNPAEIAMFLEPLDLPNKRVVFLAINDNSNQAAGGTHWSLLVYLQDKNSFFHYDSH 121 +K T+ + + + +D+ + ++ + I+ G HW L V K + +YDS Sbjct: 83 LK-TAGYQAVKRWTKKVDVFSVDILLVPIH-------LGVHWCLAVVDFRKKNITYYDSM 134 Query: 122 SRSNS---------VHAKQVAEKLEAFLGRKGDKLAFVEEKAPAQQNSYDCGM----YVI 168 N+ + + + +K + F G +L + + P Q N DCGM Y Sbjct: 135 GGINNEACRILLQYLKQESIDKKRKEF-DTNGWQLFSKKSQIPQQMNGSDCGMFACKYAD 193 Query: 169 CNTEALCQNFFRQ 181 C T+ NF +Q Sbjct: 194 CITKDRPINFTQQ 206 >5LNB-B nrPDB Length = 310 Score = 34.3 bits (77), Expect = 0.043, Method: Compositional matrix adjust. Identities = 47/207 (22%), Positives = 77/207 (37%), Gaps = 54/207 (26%) Query: 13 LRQSDVSLLDPPSWLNDHIIGFAFEYFANSQFHDCSDHVSFISPEVTQ------FIKCTS 66 + D L W+ND I+ F +++ S S I E + K S Sbjct: 35 ITNQDFKCLFNKDWVNDSILDFFTKFYIESSIEK-----SIIKREQVHLMSSFFYTKLIS 89 Query: 67 NPAE----IAMFLEPLDLPNKRVVFLAINDNSNQAAGGTHW---------SLLVYLQ--D 111 NPA+ + ++ DL +K+ V + IN HW ++L + Q D Sbjct: 90 NPADYYSNVKKWVNNTDLFSKKYVVIPIN-------ISYHWFSCIITNLDAILDFHQNKD 142 Query: 112 KNSFFHYDSHSRSNSV------------HAKQVAEKLEAFLGRKGDKLAFVEEKA----- 154 KN + D S +N + H++++ E + DK + +K Sbjct: 143 KNDAINSDEISINNPLVNILTFDSLRQTHSREIDPIKEFLISYALDKYSIQLDKTQIKMK 202 Query: 155 ----PAQQNSYDCGMYVICNTEALCQN 177 P Q N DCG++VI N +N Sbjct: 203 TCPVPQQPNMSDCGVHVILNIRKFFEN 229 >6GZU-A nrPDB Length = 272 Score = 32.0 bits (71), Expect = 0.22, Method: Compositional matrix adjust. Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 13/81 (16%) Query: 98 AGGTHWSLLVYLQDKNSFFHYDSHSRSNSVHAKQVAEKLEAFLGRKGDKL--------AF 149 AG +HW+L++ D+ +D S +N ++ + + L + R G+ F Sbjct: 130 AGISHWTLVIVNLDRREVVFFD--SLANFINNRLIDPALNSIATRLGNVYPDANGALSPF 187 Query: 150 VEEKA---PAQQNSYDCGMYV 167 + +K P QQ+S CG+++ Sbjct: 188 IVKKVIKTPIQQDSTSCGIWL 208 >5BQN-A nrPDB Length = 885 Score = 30.4 bits (67), Expect = 0.53, Method: Compositional matrix adjust. Identities = 24/114 (21%), Positives = 46/114 (40%), Gaps = 21/114 (18%) Query: 54 ISPEVTQFIKCTSNPAEIAMFLEPLDLPNKRVVFLAINDNSNQAAGGTHWSLLVYLQDKN 113 I+PE+ +P + +EPL+LP + +VF + + Y+ N Sbjct: 513 INPEIV-------DPLLPNVNMEPLNLPGEEIVF--------------YDDITKYVDYLN 551 Query: 114 SFFHYDSHSRSNSVHAKQVAEKLEAFLGRKGDKLAFVEEKAPAQQNSYDCGMYV 167 S+++ +S SN+V + +E LG F+ A G+++ Sbjct: 552 SYYYLESQKLSNNVENITLTTSVEEALGYSNKIYTFLPSLAEKVNKGVQAGLFL 605 >5BQM-B nrPDB Length = 474 Score = 30.4 bits (67), Expect = 0.63, Method: Compositional matrix adjust. Identities = 20/93 (21%), Positives = 38/93 (40%), Gaps = 14/93 (15%) Query: 75 LEPLDLPNKRVVFLAINDNSNQAAGGTHWSLLVYLQDKNSFFHYDSHSRSNSVHAKQVAE 134 +EPL+LP + +VF + + Y+ NS+++ +S SN+V + Sbjct: 130 MEPLNLPGEEIVF--------------YDDITKYVDYLNSYYYLESQKLSNNVENITLTT 175 Query: 135 KLEAFLGRKGDKLAFVEEKAPAQQNSYDCGMYV 167 +E LG F+ A G+++ Sbjct: 176 SVEEALGYSNKIYTFLPSLAEKVNKGVQAGLFL 208 >3EAY-A nrPDB Length = 323 Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust. Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 10/63 (15%) Query: 153 KAPAQQNSYDCGMYVICNTEALCQNFFRQQTESL-----LQLLTPAYITK-KRGEWKDLI 206 K P Q NS DCG+Y++ E+ FF+ + L+ P ++ K KR + ++LI Sbjct: 255 KVPKQDNSSDCGVYLLQYVES----FFKDPIVNFELPIHLEKWFPRHVIKTKREDIRELI 310 Query: 207 TTL 209 L Sbjct: 311 LKL 313 >4BLB-A nrPDB Length = 753 Score = 28.5 bits (62), Expect = 2.4, Method: Compositional matrix adjust. Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 10/73 (13%) Query: 23 PPSWLNDHIIGFAFEYFANSQFHDCSDHVSFISP-----EVTQFIKCTSNPAEIAMFLEP 77 PP+W + + G A F + DHVS+ SP Q + T +P ++P Sbjct: 473 PPTWPAELMQGLARYVFQSENTFCSGDHVSWHSPLDNSESRIQHMLLTEDPQ-----MQP 527 Query: 78 LDLPNKRVVFLAI 90 + P V FL I Sbjct: 528 VQTPFGVVTFLQI 540 >4BL8-A nrPDB Length = 831 Score = 28.1 bits (61), Expect = 2.5, Method: Compositional matrix adjust. Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 10/73 (13%) Query: 23 PPSWLNDHIIGFAFEYFANSQFHDCSDHVSFISP-----EVTQFIKCTSNPAEIAMFLEP 77 PP+W + + G A F + DHVS+ SP Q + T +P ++P Sbjct: 473 PPTWPAELMQGLARYVFQSENTFCSGDHVSWHSPLDNSESRIQHMLLTEDPQ-----MQP 527 Query: 78 LDLPNKRVVFLAI 90 + P V FL I Sbjct: 528 VQTPFGVVTFLQI 540 >4KMH-A nrPDB Length = 484 Score = 28.1 bits (61), Expect = 3.0, Method: Compositional matrix adjust. Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 10/73 (13%) Query: 23 PPSWLNDHIIGFAFEYFANSQFHDCSDHVSFISP-----EVTQFIKCTSNPAEIAMFLEP 77 PP+W + + G A F + DHVS+ SP Q + T +P ++P Sbjct: 153 PPTWPAELMQGLARYVFQSENTFCSGDHVSWHSPLDNSESRIQHMLLTEDPQ-----MQP 207 Query: 78 LDLPNKRVVFLAI 90 + P V FL I Sbjct: 208 VQTPFGVVTFLQI 220 >4KM8-A nrPDB Length = 444 Score = 27.7 bits (60), Expect = 3.3, Method: Compositional matrix adjust. Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 10/73 (13%) Query: 23 PPSWLNDHIIGFAFEYFANSQFHDCSDHVSFISP-----EVTQFIKCTSNPAEIAMFLEP 77 PP+W + + G A F + DHVS+ SP Q + T +P ++P Sbjct: 153 PPTWPAELMQGLARYVFQSENTFCSGDHVSWHSPLDNSESRIQHMLLTEDPQ-----MQP 207 Query: 78 LDLPNKRVVFLAI 90 + P V FL I Sbjct: 208 VQTPFGVVTFLQI 220 >1M1L-A nrPDB Length = 236 Score = 27.7 bits (60), Expect = 3.6, Method: Compositional matrix adjust. Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 10/73 (13%) Query: 23 PPSWLNDHIIGFAFEYFANSQFHDCSDHVSFISP-----EVTQFIKCTSNPAEIAMFLEP 77 PP+W + + G A F + DHVS+ SP Q + T +P ++P Sbjct: 107 PPTWPAELMQGLARYVFQSENTFCSGDHVSWHSPLDNSESRIQHMLLTEDPQ-----MQP 161 Query: 78 LDLPNKRVVFLAI 90 + P V FL I Sbjct: 162 VQTPFGVVTFLQI 174 >4IA5-A nrPDB Length = 591 Score = 27.3 bits (59), Expect = 4.8, Method: Compositional matrix adjust. Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 15/108 (13%) Query: 105 LLVYLQDKNSFFHYDSHSRSNSVHAKQVAEKLEAFLGRKGDKLAFVEEKAPAQQNSYDCG 164 LL YL+D F YD H ++ V +GD + + +K QN D Sbjct: 232 LLAYLKDHGVQFEYDCHVKNVEVD-------------HEGD--SKIAKKIVMTQNGKDKE 276 Query: 165 MYVICNTEALCQNFFRQQTESLLQLLTPAYITKKRGEWKDLITTLAKK 212 + + N N ++ + TPA IT +G+ L LAK+ Sbjct: 277 IDLTHNDIVFVTNGSITESSTYGDQNTPAPITNAKGDSWKLWENLAKQ 324 >4OGP-A nrPDB Length = 330 Score = 27.3 bits (59), Expect = 5.3, Method: Compositional matrix adjust. Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 10/66 (15%) Query: 15 QSDVSLLDPPSWLNDHII----------GFAFEYFANSQFHDCSDHVSFISPEVTQFIKC 64 +S + L+ PP NDHI+ + +++ A+ +H I EV I Sbjct: 202 ESKIQLIFPPREYNDHIMRLQNDKFMDEAYIWQFLASLALSGKLNHQRIIIDEVRDEIFA 261 Query: 65 TSNPAE 70 T N AE Sbjct: 262 TINEAE 267 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 2BKQ-A nrPDB 357 2e-99 1EUV-A nrPDB 201 1e-52 6DG4-A nrPDB 193 7e-50 Sequences not found previously or not previously below threshold: 2CKH-A nrPDB 85 2e-17 2IO3-A nrPDB 72 2e-13 5JP1-A nrPDB 43 9e-05 5LNB-B nrPDB 43 1e-04 3EAY-A nrPDB 38 0.002 6GZU-A nrPDB 36 0.013 3KQY-A nrPDB 29 1.6 6FDU-A nrPDB 29 2.4 4MND-A nrPDB 28 2.9 >2BKQ-A nrPDB Length = 212 Score = 357 bits (917), Expect = 2e-99, Method: Composition-based stats. Identities = 209/212 (98%), Positives = 210/212 (99%) Query: 1 MDPVVLSYMDSLLRQSDVSLLDPPSWLNDHIIGFAFEYFANSQFHDCSDHVSFISPEVTQ 60 MDPVVLSYMDSLLRQSDVSLLDPPSWLNDHIIGFAFEYFANSQFHD SDHVSFISPEVTQ Sbjct: 1 MDPVVLSYMDSLLRQSDVSLLDPPSWLNDHIIGFAFEYFANSQFHDSSDHVSFISPEVTQ 60 Query: 61 FIKCTSNPAEIAMFLEPLDLPNKRVVFLAINDNSNQAAGGTHWSLLVYLQDKNSFFHYDS 120 FIKCTSNPAEIAMFLEPLDLPNKRVVFLAINDNSNQAAGG+HWSLLVYLQDKNSFFHYDS Sbjct: 61 FIKCTSNPAEIAMFLEPLDLPNKRVVFLAINDNSNQAAGGSHWSLLVYLQDKNSFFHYDS 120 Query: 121 HSRSNSVHAKQVAEKLEAFLGRKGDKLAFVEEKAPAQQNSYDCGMYVICNTEALCQNFFR 180 HSRSNSVHAKQVAEKLEAFLGRKGDKLAFVEEKAPAQQNSYDCGMYVICNTEALCQNFFR Sbjct: 121 HSRSNSVHAKQVAEKLEAFLGRKGDKLAFVEEKAPAQQNSYDCGMYVICNTEALCQNFFR 180 Query: 181 QQTESLLQLLTPAYITKKRGEWKDLITTLAKK 212 QQTESLLQLLTPAYITKKRGEWKDLI TLAKK Sbjct: 181 QQTESLLQLLTPAYITKKRGEWKDLIATLAKK 212 >1EUV-A nrPDB Length = 221 Score = 201 bits (512), Expect = 1e-52, Method: Composition-based stats. Identities = 41/160 (25%), Positives = 63/160 (39%), Gaps = 15/160 (9%) Query: 17 DVSLLDPPSWLNDHIIGFAFEYFANSQFHDCSDHVSFISPEVTQFIKCTSNPAEIAMFLE 76 D L P WLND II F +Y S + V+F S T + M + Sbjct: 39 DFKTLAPRRWLNDTIIEFFMKYIEKS----TPNTVAFNSFFYTNLSERGYQGVRRWMKRK 94 Query: 77 PLDLPNKRVVFLAINDNSNQAAGGTHWSLLVYLQDKNSFFHYDSHSRSNSVHAKQVAEKL 136 + +F IN N +HW+L + K + + DS S + + + L Sbjct: 95 KTQIDKLDKIFTPINLNQ------SHWALGIIDLKKKTIGYVDSLSNGPNAMSFAILTDL 148 Query: 137 EAFLGRK-----GDKLAFVEEKAPAQQNSYDCGMYVICNT 171 + ++ + G+ + P Q N YDCG+YV NT Sbjct: 149 QKYVMEESKHTIGEDFDLIHLDCPQQPNGYDCGIYVCMNT 188 >6DG4-A nrPDB Length = 263 Score = 193 bits (489), Expect = 7e-50, Method: Composition-based stats. Identities = 44/180 (24%), Positives = 75/180 (41%), Gaps = 32/180 (17%) Query: 14 RQSDVSLLDPPSWLNDHIIGFAFEYFAN---------SQFHDCSDHVSFISPEVTQFIKC 64 R + LL +WLND++I A Y A+ +Q C+ SF P + Sbjct: 47 RDFEEKLLPATAWLNDNVIIGAIFYIADYVNTKKGAPNQEPKCTAFTSFFWPRL-----L 101 Query: 65 TSNPAEIAMFLEPLDLPNKRVVFLAINDNSNQAAGGTHWSLLVYLQDKNSFFHYDSHSRS 124 + P L ++ ++ FL I+ +HW+L V + + H DS + Sbjct: 102 SHGPGGCGRLLRRANV--RKANFLDIDTILIPICESSHWTLAVIRPGRRTVSHLDSMAAG 159 Query: 125 NSVHAKQVAEKL---------EAFLGRKGDKLAFVEEKAPAQQNSYDCGMYVICNTEALC 175 +++V KL + F+ + + F +AP Q N +DCG++ I N A+C Sbjct: 160 RG--SERVKAKLLELVKFVLEDQFVEAEWQAVDF---QAPRQTNGWDCGVFTITN--AIC 212 >2CKH-A nrPDB Length = 225 Score = 85.2 bits (209), Expect = 2e-17, Method: Composition-based stats. Identities = 36/180 (20%), Positives = 64/180 (35%), Gaps = 24/180 (13%) Query: 17 DVSLLDPPSWLNDHIIGFAFEYF-ANSQFHDCSDHVSFISPEVTQFIKCTSNPAEIAMFL 75 D+ L+ +WLND II F S+ +F + T+ + Sbjct: 38 DIQTLNHLNWLNDEIINFYMNMLMERSKEKGLPSVHAFNTFFFTKLKTAGYQAVKRW--- 94 Query: 76 EPLDLPNKRVVFLAINDNSNQAAGGTHWSLLVYLQDKNSFFHYDSHSRSNS--------- 126 K+V +++ G HW L V K + +YDS N+ Sbjct: 95 ------TKKVDVFSVDILLVPIHLGVHWCLAVVDFRKKNITYYDSMGGINNEACRILLQY 148 Query: 127 VHAKQVAEKLEAFLGRKGDKLAFVEEKAPAQQNSYDCGMYVICNTEALCQ----NFFRQQ 182 + + + +K + F + + + P Q N DCGM+ + + + NF +Q Sbjct: 149 LKQESIDKKRKEFDTNGWQLFS-KKSQIPQQMNGSDCGMFACKYADCITKDRPINFTQQH 207 >2IO3-A nrPDB Length = 232 Score = 71.7 bits (174), Expect = 2e-13, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 50/181 (27%), Gaps = 27/181 (14%) Query: 2 DPVVLSYMDSLLRQSDVSLLDPPSWLNDHIIGFAFEY-FANSQFHDCSDHVSFISPEVTQ 60 D ++ S + + D+ L WLND +I F ++ F + + Sbjct: 29 DEILSSAFKLRITRGDIQTLKNYHWLNDEVINFYMNLLVERNKKQGYPALHVFSTFFYPK 88 Query: 61 FIKCTSNPAEIAMFLEPLDLPNKRVVFLAINDNSNQAAGGTHWSLLVYLQDKNSFFHYDS 120 + K V HWSL+V K + DS Sbjct: 89 LKSGGYQAVKRW---------TKGVNLFEQEIILVPIHRKVHWSLVVIDLRKKCLKYLDS 139 Query: 121 HSRSNSVHAKQVAEKLEAFLGR-------------KGDKLAFVEEKAPAQQNSYDCGMYV 167 ++ E L +L + + + P Q N D GM+ Sbjct: 140 M----GQKGHRICEILLQYLQDESKTKRNSDLNLLEWTHHSMKPHEIPQQLNGSDSGMFT 195 Query: 168 I 168 Sbjct: 196 C 196 >5JP1-A nrPDB Length = 220 Score = 43.2 bits (100), Expect = 9e-05, Method: Composition-based stats. Identities = 37/167 (22%), Positives = 65/167 (38%), Gaps = 19/167 (11%) Query: 15 QSDVSLLDPPSWLNDHIIGFAFEYFANSQFHDCSDHVSFISPEVTQFIKCTSNP---AEI 71 ++ + SWL D + + A + + H+ + + +++P A Sbjct: 32 DPELPPVRATSWLLDGHLRAYTDDLARRLRGEPNAHLLHFADSQVVTMLSSADPDQQARA 91 Query: 72 AMFLEPLDLPNKRVVFLAINDNSNQAAGGTHWSLLVYLQDKN---SFFHYDSHSRSNSVH 128 L D+P +VFL IN HWSLLV + + +HYDS ++ + Sbjct: 92 QRLLAGDDIPP--IVFLPIN------QPNAHWSLLVVDRRNKDAVAAYHYDSMAQKD--P 141 Query: 129 AKQVAEKLEAFLGRKGDKLAFVEEKAPA-QQNSYDCGMYVICNTEAL 174 ++ + A+ G E A Q + Y CG +V+ E L Sbjct: 142 QQRYLADMAAY--HLGLDYQQTHEMPIAIQSDGYSCGDHVLTGIEVL 186 >5LNB-B nrPDB Length = 310 Score = 42.8 bits (99), Expect = 1e-04, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 74/210 (35%), Gaps = 54/210 (25%) Query: 17 DVSLLDPPSWLNDHIIGFAFEYFANSQFHDC----SDHVSFISPEVTQFIKCTSNPAEIA 72 D L W+ND I+ F +++ S S T+ I SNPA+ Sbjct: 39 DFKCLFNKDWVNDSILDFFTKFYIESSIEKSIIKREQVHLMSSFFYTKLI---SNPADYY 95 Query: 73 MFLEP----LDLPNKRVVFLAINDNSNQAAGGTHWSLLVY-----------LQDKN---- 113 ++ DL +K+ V + IN HW + +DKN Sbjct: 96 SNVKKWVNNTDLFSKKYVVIPINI-------SYHWFSCIITNLDAILDFHQNKDKNDAIN 148 Query: 114 -----------SFFHYDSHSRSNSVHAKQVAEKLEAFLGRKG----DKLAFVEEKAP--A 156 + +DS +++S + E L ++ K DK + P Sbjct: 149 SDEISINNPLVNILTFDSLRQTHSREIDPIKEFLISYALDKYSIQLDKTQIKMKTCPVPQ 208 Query: 157 QQNSYDCGMYVICNTEALCQNFFRQQTESL 186 Q N DCG++VI N + FF E++ Sbjct: 209 QPNMSDCGVHVILNI----RKFFENPVETI 234 >3EAY-A nrPDB Length = 323 Score = 38.2 bits (87), Expect = 0.002, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 36/110 (32%), Gaps = 27/110 (24%) Query: 17 DVSLLDPPSWLNDHIIGFAFEYF-----ANSQFHDCSDHVSFISPEVTQ----------- 60 D+ L+ +LND II F +Y ++ SF +T+ Sbjct: 39 DLECLEEGEFLNDVIIDFYLKYLILEKASDELVERSHIFSSFFYKCLTRKENNLTEDNPN 98 Query: 61 --FIKCTSNPAEIAMFLEPLDLPNKRVVFLAINDNSNQAAGGTHWSLLVY 108 + +++ NK +F+ +N +HW L V Sbjct: 99 LSMAQRRHKRVRTWT--RHINIFNKDYIFVPVN-------ESSHWYLAVI 139 Score = 30.5 bits (67), Expect = 0.61, Method: Composition-based stats. Identities = 26/117 (22%), Positives = 45/117 (38%), Gaps = 25/117 (21%) Query: 111 DKNSFFHYDSHSRSNSVHAKQVAEKLEAFLGRKGD----------KLAFVEE--KAPAQQ 158 + DS + + L +L + + K V+ K P Q Sbjct: 204 KRPCILILDSLKA---ASVQNTVQNLREYLEVEWEVKLKTHRQFSKTNMVDLCPKVPKQD 260 Query: 159 NSYDCGMYVICNTEALCQNFFRQQTESL-----LQLLTPAYITK-KRGEWKDLITTL 209 NS DCG+Y++ E+ FF+ + L+ P ++ K KR + ++LI L Sbjct: 261 NSSDCGVYLLQYVES----FFKDPIVNFELPIHLEKWFPRHVIKTKREDIRELILKL 313 >6GZU-A nrPDB Length = 272 Score = 35.9 bits (81), Expect = 0.013, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 9/79 (11%) Query: 98 AGGTHWSLLVYLQDKNSFFHYDSHSRSNS-----VHAKQVAEKL-EAFLGRKGDKLAFVE 151 AG +HW+L++ D+ +DS + + +A +L + G F+ Sbjct: 130 AGISHWTLVIVNLDRREVVFFDSLANFINNRLIDPALNSIATRLGNVYPDANGALSPFIV 189 Query: 152 E---KAPAQQNSYDCGMYV 167 + K P QQ+S CG+++ Sbjct: 190 KKVIKTPIQQDSTSCGIWL 208 >3KQY-A nrPDB Length = 289 Score = 29.0 bits (63), Expect = 1.6, Method: Composition-based stats. Identities = 9/49 (18%), Positives = 14/49 (28%), Gaps = 1/49 (2%) Query: 52 SFISPEVTQFIKCTSNPAEIAMFLEPLDLPNKRVVFLAINDNSNQAAGG 100 +F +Q E E L + L I+ + Q G Sbjct: 120 AFNWSMYSQHACLIEGKGECWQDKER-QLRARVKRVLPIDVHQPQPLGA 167 >6FDU-A nrPDB Length = 266 Score = 28.6 bits (62), Expect = 2.4, Method: Composition-based stats. Identities = 10/80 (12%), Positives = 29/80 (36%), Gaps = 11/80 (13%) Query: 99 GGTHWSLLVYLQDKNSFFHYDSHSRSNSVHAKQVAEKLEAFLGRKGD----------KLA 148 G +HW L++ ++DS + + + ++L++F + + Sbjct: 137 GASHWLLVIVDIQARRLVYFDSLYN-YVMPPENMKKELQSFAQQLDQVYPAYDSKKFSVK 195 Query: 149 FVEEKAPAQQNSYDCGMYVI 168 ++ + + CG + Sbjct: 196 IAAKEVIQRGSGSSCGAWCC 215 >4MND-A nrPDB Length = 479 Score = 28.2 bits (61), Expect = 2.9, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 19/49 (38%) Query: 113 NSFFHYDSHSRSNSVHAKQVAEKLEAFLGRKGDKLAFVEEKAPAQQNSY 161 + H + A + A+ ++AFL KG V P + N Y Sbjct: 72 RTMKLLSPHVSEFIIVASRYADDIDAFLKDKGFNYKIVRHDRPEKGNGY 120 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.313 0.127 0.347 Lambda K H 0.267 0.0389 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 7,683,060 Number of Sequences: 36641 Number of extensions: 262274 Number of successful extensions: 634 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 17 Number of HSP's that attempted gapping in prelim test: 597 Number of HSP's gapped (non-prelim): 33 length of query: 212 length of database: 10,336,785 effective HSP length: 93 effective length of query: 119 effective length of database: 6,929,172 effective search space: 824571468 effective search space used: 824571468 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 57 (26.6 bits)