BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q96KN2 (507 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 3DLJ-A nrPDB 993 0.0 2ZOF-A nrPDB 553 e-158 4RUH-A nrPDB 543 e-155 4G1P-A nrPDB 414 e-116 4O23-A nrPDB 60 2e-09 4ONW-A nrPDB 54 2e-07 4H2K-A nrPDB 50 2e-06 3ISZ-A nrPDB 50 3e-06 1LFW-A nrPDB 49 5e-06 3KHX-A nrPDB 48 9e-06 3PFO-A nrPDB 46 3e-05 1Q7L-A nrPDB 44 1e-04 3CT9-A nrPDB 38 0.010 4Q7A-A nrPDB 37 0.015 1LXY-A nrPDB 37 0.025 5XOY-A nrPDB 35 0.061 5MMM-I nrPDB 33 0.20 1YS7-A nrPDB 32 0.44 3LXV-A nrPDB 30 2.4 5EY5-B nrPDB 30 2.7 6IGZ-3 nrPDB 29 4.9 6BP7-A nrPDB 29 5.2 5KIN-B nrPDB 29 6.0 3R3J-A nrPDB 28 8.2 2RB7-A nrPDB 28 9.6 >3DLJ-A nrPDB Length = 485 Score = 993 bits (2568), Expect = 0.0, Method: Compositional matrix adjust. Identities = 481/485 (99%), Positives = 482/485 (99%) Query: 23 GMFSSPSPPPALLEKVFQYIDLHQDEFVQTLKEWVAIESDSVQPVPRFRQELFRMMAVAA 82 G SPSPPPALLEKVFQYIDLHQDEFVQTLKEWVAIESDSVQPVPRFRQELFRMMAVAA Sbjct: 1 GAMDSPSPPPALLEKVFQYIDLHQDEFVQTLKEWVAIESDSVQPVPRFRQELFRMMAVAA 60 Query: 83 DTLQRLGARVASVDMGPQQLPDGQSLPIPPIILAELGSDPTKGTVCFYGHLDVQPADRGD 142 DTLQRLGARVASVDMGPQQLPDGQSLPIPP+ILAELGSDPTKGTVCFYGHLDVQPADRGD Sbjct: 61 DTLQRLGARVASVDMGPQQLPDGQSLPIPPVILAELGSDPTKGTVCFYGHLDVQPADRGD 120 Query: 143 GWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVSAFRALEQDLPVNIKFIIEGMEEAG 202 GWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVSAFRALEQDLPVNIKFIIEGMEEAG Sbjct: 121 GWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVSAFRALEQDLPVNIKFIIEGMEEAG 180 Query: 203 SVALEELVEKEKDRFFSGVDYIVISDNLWISQRKPAITYGTRGNSYFMVEVKCRDQDFHS 262 SVALEELVEKEKDRFFSGVDYIVISDNLWISQRKPAITYGTRGNSYFMVEVKCRDQDFHS Sbjct: 181 SVALEELVEKEKDRFFSGVDYIVISDNLWISQRKPAITYGTRGNSYFMVEVKCRDQDFHS 240 Query: 263 GTFGGILHEPMADLVALLGSLVDSSGHILVPGIYDEVVPLTEEEINTYKAIHLDLEEYRN 322 GTFGGILHEPMADLVALLGSLVDSSGHILVPGIYDEVVPLTEEEINTYKAIHLDLEEYRN Sbjct: 241 GTFGGILHEPMADLVALLGSLVDSSGHILVPGIYDEVVPLTEEEINTYKAIHLDLEEYRN 300 Query: 323 SSRVEKFLFDTKEEILMHLWRYPSLSIHGIEGAFDEPGTKTVIPGRVIGKFSIRLVPHMN 382 SSRVEKFLFDTKEEILMHLWRYPSLSIHGIEGAFDEPGTKTVIPGRVIGKFSIRLVPHMN Sbjct: 301 SSRVEKFLFDTKEEILMHLWRYPSLSIHGIEGAFDEPGTKTVIPGRVIGKFSIRLVPHMN 360 Query: 383 VSAVEKQVTRHLEDVFSKRNSSNKMVVSMTLGLHPWIANIDDTQYLAAKRAIRTVFGTEP 442 VSAVEKQVTRHLEDVFSKRNSSNKMVVSMTLGLHPWIANIDDTQYLAAKRAIRTVFGTEP Sbjct: 361 VSAVEKQVTRHLEDVFSKRNSSNKMVVSMTLGLHPWIANIDDTQYLAAKRAIRTVFGTEP 420 Query: 443 DMIRDGSTIPIAKMFQEIVHKSVVLIPLGAVDDGEHSQNEKINRWNYIEGTKLFAAFFLE 502 DMIRDGSTIPIAKMFQEIVHKSVVLIPLGAVDDGEHSQNEKINRWNYIEGTKLFAAFFLE Sbjct: 421 DMIRDGSTIPIAKMFQEIVHKSVVLIPLGAVDDGEHSQNEKINRWNYIEGTKLFAAFFLE 480 Query: 503 MAQLH 507 MAQLH Sbjct: 481 MAQLH 485 >2ZOF-A nrPDB Length = 479 Score = 553 bits (1425), Expect = e-158, Method: Compositional matrix adjust. Identities = 257/474 (54%), Positives = 338/474 (71%), Gaps = 2/474 (0%) Query: 33 ALLEKVFQYIDLHQDEFVQTLKEWVAIESDSVQPVPRFRQELFRMMAVAADTLQRLGARV 92 + L+ VFQYID +QD +V+ L EWVAI+S V P R E+ RMM VAA +QRLG V Sbjct: 6 SALKAVFQYIDENQDRYVKKLAEWVAIQS--VSAWPEKRGEIRRMMEVAAADVQRLGGSV 63 Query: 93 ASVDMGPQQLPDGQSLPIPPIILAELGSDPTKGTVCFYGHLDVQPADRGDGWLTDPYVLT 152 VD+G Q+LPDG +P+PPI+L +LGSDP K TVC YGHLDVQPA DGW ++P+ L Sbjct: 64 ELVDIGKQKLPDGSEIPLPPILLGKLGSDPQKKTVCIYGHLDVQPAALEDGWDSEPFTLV 123 Query: 153 EVDGKLYGRGATDNKGPVLAWINAVSAFRALEQDLPVNIKFIIEGMEEAGSVALEELVEK 212 E +GKLYGRG+TD+KGPV W+NA+ A++ Q++PVN++F +EGMEE+GS L+EL+ Sbjct: 124 EREGKLYGRGSTDDKGPVAGWMNALEAYQKTGQEIPVNLRFCLEGMEESGSEGLDELIFA 183 Query: 213 EKDRFFSGVDYIVISDNLWISQRKPAITYGTRGNSYFMVEVKCRDQDFHSGTFGGILHEP 272 +KD+FF VDY+ ISDN W+ + KP ITYG RG YF +EV+C D+D HSG +GG +HE Sbjct: 184 QKDKFFKDVDYVCISDNYWLGKNKPCITYGLRGICYFFIEVECSDKDLHSGVYGGSVHEA 243 Query: 273 MADLVALLGSLVDSSGHILVPGIYDEVVPLTEEEINTYKAIHLDLEEYRNSSRVEKFLFD 332 M DL++L+G LVD G IL+PGI D V P+T+EE Y I D+EE+ E L Sbjct: 244 MTDLISLMGCLVDKKGKILIPGINDAVAPVTDEEHALYDHIDFDMEEFAKDVGAETLLHS 303 Query: 333 TKEEILMHLWRYPSLSIHGIEGAFDEPGTKTVIPGRVIGKFSIRLVPHMNVSAVEKQVTR 392 K++ILMH WRYPSLS+HGIEGAF G KTVIP +V+GKFSIRLVP M V +QV+ Sbjct: 304 CKKDILMHRWRYPSLSLHGIEGAFSGSGAKTVIPRKVVGKFSIRLVPDMIPEVVSEQVSS 363 Query: 393 HLEDVFSKRNSSNKMVVSMTLGLHPWIANIDDTQYLAAKRAIRTVFGTEPDMIRDGSTIP 452 +L F++ S NK V M G PW+++ + Y A +RA++TVFG EPD+ R+G +IP Sbjct: 364 YLSKKFAELQSPNKFKVYMGHGGKPWVSDFNHPHYQAGRRALKTVFGVEPDLTREGGSIP 423 Query: 453 IAKMFQEIVHKSVVLIPLGAVDDGEHSQNEKINRWNYIEGTKLFAAFFLEMAQL 506 + FQE K+V+L+P+G+ DDG HSQNEK+NR NYIEGTK+ AA+ E++QL Sbjct: 424 VTLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRLNYIEGTKMLAAYLYEVSQL 477 >4RUH-A nrPDB Length = 475 Score = 543 bits (1400), Expect = e-155, Method: Compositional matrix adjust. Identities = 253/474 (53%), Positives = 337/474 (71%), Gaps = 2/474 (0%) Query: 33 ALLEKVFQYIDLHQDEFVQTLKEWVAIESDSVQPVPRFRQELFRMMAVAADTLQRLGARV 92 A L +F+YID +QD +++ L +WVAI+S V P R E+ RMM VAA +++LG V Sbjct: 2 AALTTLFKYIDENQDRYIKKLAKWVAIQS--VSAWPEKRGEIRRMMEVAAADVKQLGGSV 59 Query: 93 ASVDMGPQQLPDGQSLPIPPIILAELGSDPTKGTVCFYGHLDVQPADRGDGWLTDPYVLT 152 VD+G Q+LPDG +P+PPI+L LGSDP K TVC YGHLDVQPA DGW ++P+ L Sbjct: 60 ELVDIGKQKLPDGSEIPLPPILLGRLGSDPQKKTVCIYGHLDVQPAALEDGWDSEPFTLV 119 Query: 153 EVDGKLYGRGATDNKGPVLAWINAVSAFRALEQDLPVNIKFIIEGMEEAGSVALEELVEK 212 E DGKLYGRG+TD+KGPV WINA+ A++ Q++PVN++F +EGMEE+GS L+EL+ Sbjct: 120 ERDGKLYGRGSTDDKGPVAGWINALEAYQKTGQEIPVNVRFCLEGMEESGSEGLDELIFA 179 Query: 213 EKDRFFSGVDYIVISDNLWISQRKPAITYGTRGNSYFMVEVKCRDQDFHSGTFGGILHEP 272 KD FF VDY+ ISDN W+ ++KP ITYG RG YF +EV+C ++D HSG +GG +HE Sbjct: 180 RKDTFFKDVDYVCISDNYWLGKKKPCITYGLRGICYFFIEVECSNKDLHSGVYGGSVHEA 239 Query: 273 MADLVALLGSLVDSSGHILVPGIYDEVVPLTEEEINTYKAIHLDLEEYRNSSRVEKFLFD 332 M DL+ L+GSLVD G+IL+PGI + V +TEEE Y I D+EE+ + L Sbjct: 240 MTDLILLMGSLVDKRGNILIPGINEAVAAVTEEEHKLYDDIDFDIEEFAKDVGAQILLHS 299 Query: 333 TKEEILMHLWRYPSLSIHGIEGAFDEPGTKTVIPGRVIGKFSIRLVPHMNVSAVEKQVTR 392 K++ILMH WRYPSLS+HGIEGAF G KTVIP +V+GKFSIRLVP+M V +QVT Sbjct: 300 HKKDILMHRWRYPSLSLHGIEGAFSGSGAKTVIPRKVVGKFSIRLVPNMTPEVVGEQVTS 359 Query: 393 HLEDVFSKRNSSNKMVVSMTLGLHPWIANIDDTQYLAAKRAIRTVFGTEPDMIRDGSTIP 452 +L F++ S N+ V M G PW+++ YLA +RA++TVFG EPD+ R+G +IP Sbjct: 360 YLTKKFAELRSPNEFKVYMGHGGKPWVSDFSHPHYLAGRRAMKTVFGVEPDLTREGGSIP 419 Query: 453 IAKMFQEIVHKSVVLIPLGAVDDGEHSQNEKINRWNYIEGTKLFAAFFLEMAQL 506 + FQE K+V+L+P+G+ DDG HSQNEK+NR+NYIEGTK+ AA+ E++QL Sbjct: 420 VTLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRYNYIEGTKMLAAYLYEVSQL 473 >4G1P-A nrPDB Length = 487 Score = 414 bits (1064), Expect = e-116, Method: Compositional matrix adjust. Identities = 211/470 (44%), Positives = 295/470 (62%), Gaps = 6/470 (1%) Query: 35 LEKVFQYIDLHQDEFVQTLKEWVAIESDSVQPVPRFRQELFRMMAVAADTLQRLGAR-VA 93 L VFQ ID + +F L + AI+ +V R ++F ++ L + G + Sbjct: 5 LTSVFQKIDSLKPQFFSRLTK--AIQIPAVSSDESLRSKVFDKAKFISEQLSQSGFHDIK 62 Query: 94 SVDMGPQQLP-DGQSLPIPPIILAELGSDPTKGTVCFYGHLDVQPADRGDGWLTDPY--V 150 VD+G Q P +L +PP+IL+ GSDP+K TV YGH DVQPA DGW T+P+ V Sbjct: 63 MVDLGIQPPPISTPNLSLPPVILSRFGSDPSKKTVLVYGHYDVQPAQLEDGWDTEPFKLV 122 Query: 151 LTEVDGKLYGRGATDNKGPVLAWINAVSAFRALEQDLPVNIKFIIEGMEEAGSVALEELV 210 + E G + GRG TD+ GP+L+WIN V AF+A Q+ PVN+ EGMEE+GS+ L+EL+ Sbjct: 123 IDEAKGIMKGRGVTDDTGPLLSWINVVDAFKASGQEFPVNLVTCFEGMEESGSLKLDELI 182 Query: 211 EKEKDRFFSGVDYIVISDNLWISQRKPAITYGTRGNSYFMVEVKCRDQDFHSGTFGGILH 270 +KE + +F GVD + ISDN W+ +KP +TYG RG +Y+ ++ D HSG FGG++ Sbjct: 183 KKEANGYFKGVDAVCISDNYWLGTKKPVLTYGLRGCNYYQTIIEGPSADLHSGIFGGVVA 242 Query: 271 EPMADLVALLGSLVDSSGHILVPGIYDEVVPLTEEEINTYKAIHLDLEEYRNSSRVEKFL 330 EPM DL+ +LGSLVDS G IL+ GI + V PLTE+E YK I +EE ++ + L Sbjct: 243 EPMIDLMQVLGSLVDSKGKILIDGIDEMVAPLTEKEKALYKDIEFSVEELNAATGSKTSL 302 Query: 331 FDTKEEILMHLWRYPSLSIHGIEGAFDEPGTKTVIPGRVIGKFSIRLVPHMNVSAVEKQV 390 +D KE+ILMH WRYPSLSIHG+EGAF G KTVIP +V GKFSIR VP M+ + V Sbjct: 303 YDKKEDILMHRWRYPSLSIHGVEGAFSAQGAKTVIPAKVFGKFSIRTVPDMDSEKLTSLV 362 Query: 391 TRHLEDVFSKRNSSNKMVVSMTLGLHPWIANIDDTQYLAAKRAIRTVFGTEPDMIRDGST 450 +H + F NS NK + W+++ + Q+ AAK+A + V+G +PD R+G + Sbjct: 363 QKHCDAKFKSLNSPNKCRTELIHDGAYWVSDPFNAQFTAAKKATKLVYGVDPDFTREGGS 422 Query: 451 IPIAKMFQEIVHKSVVLIPLGAVDDGEHSQNEKINRWNYIEGTKLFAAFF 500 IPI FQ+ ++ SV+L+P+G DDG HS NEK++ N++ G K AA+ Sbjct: 423 IPITLTFQDALNTSVLLLPMGRGDDGAHSINEKLDISNFVGGMKTMAAYL 472 >4O23-A nrPDB Length = 384 Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 8/132 (6%) Query: 127 VCFYGHLDVQPADRGDGWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVSAFRALEQD 186 VCF GH DV P + W + P+ E DG+LYGRGA D K + ++ A F A + Sbjct: 66 VCFAGHTDVVPTGPVEKWDSPPFEPAERDGRLYGRGAADMKTSIACFVTACERFVAKHPN 125 Query: 187 LPVNIKFIIEGMEEA----GSVALEELVEKEKDRFFSGVDYIVISDNLWISQRKPAITYG 242 +I +I EE G+ + +++ K +D +DY ++ + + + I G Sbjct: 126 HQGSIALLITSDEEGDALDGTTKVVDVL-KARDEL---IDYCIVGEPTAVDKLGDMIKNG 181 Query: 243 TRGNSYFMVEVK 254 RG+ + VK Sbjct: 182 RRGSLSGNLTVK 193 >4ONW-A nrPDB Length = 268 Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/73 (43%), Positives = 38/73 (52%) Query: 129 FYGHLDVQPADRGDGWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVSAFRALEQDLP 188 F GH DV PA W T P+ T +DG L+GRGA D KG + I AV F A D Sbjct: 67 FAGHTDVVPAGPLSQWHTPPFEPTVIDGFLHGRGAADMKGSLACMIVAVERFIAEHPDHQ 126 Query: 189 VNIKFIIEGMEEA 201 +I F+I EE Sbjct: 127 GSIGFLITSDEEG 139 >4H2K-A nrPDB Length = 269 Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 8/127 (6%) Query: 127 VCFYGHLDVQPADRGDGWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVSAFRALEQD 186 + F GH DV P + W + P+ +DG LYGRGA D KG + A I A + + Sbjct: 65 IAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPN 124 Query: 187 LPVNIKFIIEGMEEA----GSVALEELVEKEKDRFFSGVDYIVISDNLWISQRKPAITYG 242 I +I EEA G++ + E + ++ + Y ++ + + G Sbjct: 125 HKGTIALLITSDEEATAKDGTIHVVETLMARDEK----ITYCMVGEPSSAKNLGDVVKNG 180 Query: 243 TRGNSYF 249 RG + Sbjct: 181 RRGGGFL 187 >3ISZ-A nrPDB Length = 377 Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 27/75 (36%), Positives = 36/75 (48%) Query: 127 VCFYGHLDVQPADRGDGWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVSAFRALEQD 186 + F GH DV P + W + P+ +DG LYGRGA D KG + A I A + + Sbjct: 62 IAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPN 121 Query: 187 LPVNIKFIIEGMEEA 201 I +I EEA Sbjct: 122 HKGTIALLITSDEEA 136 >1LFW-A nrPDB Length = 470 Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%) Query: 131 GHLDVQPADRGDGWLTDPYVLTEVD--GKLYGRGATDNKGPVLAWINAVSAFRALEQDLP 188 GH+DV PA G+GW DP+ + E+D G++YGRG+ D+KGP L + + Sbjct: 86 GHMDVVPA--GEGWTRDPFKM-EIDEEGRIYGRGSADDKGPSLTAYYGMLLLKEAGFKPK 142 Query: 189 VNIKFIIEGMEEAGSVALEELVEKE 213 I F++ EE V ++ ++ E Sbjct: 143 KKIDFVLGTNEETNWVGIDYYLKHE 167 >3KHX-A nrPDB Length = 492 Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 55/174 (31%), Positives = 75/174 (43%), Gaps = 34/174 (19%) Query: 36 EKVFQYIDLHQDEFVQTLKEWVAIES--DSVQ-----PV-PRFRQELFRMMAVAADTLQR 87 EKV QY +D+ + LK +AIES D + PV P R+ L M +A R Sbjct: 27 EKVQQY----EDQIINDLKGLLAIESVRDDAKASEDAPVGPGPRKALDYMYEIA----HR 78 Query: 88 LGARVASVDMGPQQLPDGQSLPIPPIILAELGSDPTKGTVCFYGHLDVQPADRGDGWLTD 147 G VD I I A G+D G +C H+DV PA GDGW ++ Sbjct: 79 DGFTTHDVDH------------IAGRIEAGKGND-VLGILC---HVDVVPA--GDGWDSN 120 Query: 148 PYVLTEVDGKLYGRGATDNKGPVLAWINAVSAFRALEQDLPVNIKFIIEGMEEA 201 P+ + + RG D+KGP +A A+ + D I II EE+ Sbjct: 121 PFEPVVTEDAIIARGTLDDKGPTIAAYYAIKILEDMNVDWKKRIHMIIGTDEES 174 >3PFO-A nrPDB Length = 433 Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 3/99 (3%) Query: 114 ILAELGSDPTKGTVCFYGHLDVQPADRGDGWLTDPYVLTEVDGKLYGRGATDNKGPVLAW 173 ++A SD ++ GH+DV P D W PY DG + GRGA D KG V A Sbjct: 93 VVATADSDGKGRSLILQGHIDVVPEGPVDLWSDPPYEAKVRDGWMIGRGAQDMKGGVSAM 152 Query: 174 INAVSAFR--ALEQDLPVNIKFIIEGMEEAGSVALEELV 210 I A+ A R D V+++ + E E G+ AL L+ Sbjct: 153 IFALDAIRTAGYAPDARVHVQTVTE-EESTGNGALSTLM 190 >1Q7L-A nrPDB Length = 198 Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/141 (24%), Positives = 59/141 (41%), Gaps = 15/141 (10%) Query: 63 SVQPVPRFRQELFRMMAVAADTLQRLGARVASVDMGPQQLPDGQSLPIPPIILAELGSDP 122 +VQP P + +A +T ++LG V++ P + +L G++P Sbjct: 24 TVQPKPDYGA----AVAFFEETARQLGLGCQKVEVAPGYVV---------TVLTWPGTNP 70 Query: 123 TKGTVCFYGHLDVQPADRGDGWLTDPY-VLTEVDGKLYGRGATDNKGPVLAWINAVSAFR 181 T ++ H DV P + + W DP+ + +G +Y RGA D K + ++ AV + Sbjct: 71 TLSSILLNSHTDVVPVFK-EHWSHDPFEAFKDSEGYIYARGAQDMKCVSIQYLEAVRRLK 129 Query: 182 ALEQDLPVNIKFIIEGMEEAG 202 P I EE G Sbjct: 130 VEGHRFPRTIHMTFVPDEEVG 150 >3CT9-A nrPDB Length = 356 Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 4/55 (7%) Query: 121 DPTKGTVCFYGHLD-VQPADRGDGWLTDPYVLTEVDGKLYGRGATDNKGPVLAWI 174 D K T+ H+D V+P + GW DP+ E +GKLYG G+ D V++ + Sbjct: 63 DLKKPTILLNSHIDTVKPVN---GWRKDPFTPREENGKLYGLGSNDAGASVVSLL 114 >4Q7A-A nrPDB Length = 370 Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 21/104 (20%) Query: 97 MGPQQLPDGQSLPIPPIILAELGSDPTKGTVCFYGHLDVQPADRGDGWLTDPYVLTEVDG 156 +G Q PDG + G P + + GH+D P + + VDG Sbjct: 46 LGYQAEPDGAGNAV-----GTRGEGPRE--IMLLGHIDTVPGE---------VPVQVVDG 89 Query: 157 KLYGRGATDNKGPVLAWINAVSAFRALEQDLPVNIKFIIEGMEE 200 LYGRGA D KGP+ ++ V+ RA LP ++ + G E Sbjct: 90 VLYGRGAVDAKGPLATFV--VAGARA---KLPPGVRLTVVGAVE 128 >1LXY-A nrPDB Length = 409 Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust. Identities = 44/188 (23%), Positives = 80/188 (42%), Gaps = 38/188 (20%) Query: 328 KFLFDTKEEILMHLWRY-PSLSIHGIEGAFDEPGTKTVIPGRVIGKFSIRLVPHMNVSAV 386 +F+F +++ W Y PSL + IEG G V + LV ++ Sbjct: 187 RFVFSNHPKLINTPWYYDPSLKL-SIEG------------GDVFIYNNDTLVVGVSERTD 233 Query: 387 EKQVTRHLEDVFSKRNSSNKMVVSMT-------LGLHPWIANIDDTQYLAAKRAIRTVF- 438 + VT +++ + + K +V++ + L W+ +D ++L + A VF Sbjct: 234 LQTVTLLAKNIVANKECEFKRIVAINVPKWTNLMHLDTWLTMLDKDKFLYSPIA-NDVFK 292 Query: 439 ---------GTEPDMIRDGSTIPIAKMFQEIVHKSVVLIPLGAVDDGEHSQNEKINRWNY 489 G EP + +G +P+ + Q I++K VLIP+ GE + +I R + Sbjct: 293 FWDYDLVNGGAEPQPVENG--LPLEGLLQSIINKKPVLIPIA----GEGASQMEIERETH 346 Query: 490 IEGTKLFA 497 +GT A Sbjct: 347 FDGTNYLA 354 >5XOY-A nrPDB Length = 373 Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust. Identities = 45/163 (27%), Positives = 65/163 (39%), Gaps = 36/163 (22%) Query: 116 AELGSDPTKGTVCFYGHLDVQPADRGDGWLTDPYVLTEVDGKLYGRGATDNKGPVLAWIN 175 ++G P + V GH+D P P L G+L+GRGA D KGP +A I Sbjct: 65 GQVGEGPVQ--VVLLGHIDTVPGQ-------IPVRLE--GGRLFGRGAVDAKGPFVAMIF 113 Query: 176 AVSAFRALEQDLPVNIKFIIEGMEEAGSVALEELVEKEKDRFFS---GVDYIVISD-NLW 231 A + L ++ + + G E EE + RF + Y VI + + W Sbjct: 114 AAA---GLSEEARKRLTVHLVGATE------EEAPSSKGARFVAPRLKPHYAVIGEPSGW 164 Query: 232 ISQRKPAITYGTRGNSYFMVEVKCRDQDFHSGTFGGILHEPMA 274 IT G +G +V+ + FHS HEP A Sbjct: 165 -----EGITLGYKGR--LLVKARREKDHFHSAH-----HEPNA 195 >5MMM-I nrPDB Length = 232 Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust. Identities = 41/140 (29%), Positives = 54/140 (38%), Gaps = 27/140 (19%) Query: 170 VLAWIN----AVSAFRALEQDLPVNIKFIIEGMEEAGSVALEELVEKE-KDRFFSGVDYI 224 +LA IN V F+ L + LP N I VA LVEK +D ++ + Sbjct: 75 LLAAINYKGFTVKQFQDLRKALPENTTLI---------VAKNTLVEKAVQDTQWAAIKPC 125 Query: 225 VISDNLWISQRKPAITYGTRGNSYFMVEVKCRDQDFHSGTFGGILHEP-----------M 273 + N W+ I + F E K D DF F G + P Sbjct: 126 MKGMNAWLFVHSEEIPIAIKPYRTFQKERKLEDNDFTGACFEGKFYGPGEVKRLETMPSK 185 Query: 274 ADLVA-LLGSLVDSSGHILV 292 A++ A LLGSL S G LV Sbjct: 186 AEIFAKLLGSL-KSPGSALV 204 >1YS7-A nrPDB Length = 233 Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust. Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 9/51 (17%) Query: 150 VLTEVDGKLYGRGATDNK---------GPVLAWINAVSAFRALEQDLPVNI 191 V T VDG R AT+N+ PVL ++ V+A RA++ D+PV + Sbjct: 34 VATAVDGAEALRSATENRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCV 84 >3LXV-A nrPDB Length = 200 Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust. Identities = 27/118 (22%), Positives = 43/118 (36%), Gaps = 27/118 (22%) Query: 277 VALLGSLVDSSGHILVPGIYDEVVPLTEEEINTYKAIHLDLEEYRNSSRVEKFLFDTKEE 336 + LLG + D +GH+ + D + + + + N +LE NS FD E Sbjct: 49 ILLLGQVYDGNGHL----VRDSFLEVWQADANGEYQDAYNLENAFNSFGRTATTFDAGEW 104 Query: 337 ILMHLWRYPSLSIHGIEGAFDEPGTKTVIPGRVIGKFSIRLVPHMNVSAVEKQVTRHL 394 L TV PG V + + PH+N+S + + HL Sbjct: 105 TL-----------------------HTVKPGVVNNAAGVPMAPHINISLFARGINIHL 139 >5EY5-B nrPDB Length = 399 Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust. Identities = 26/116 (22%), Positives = 48/116 (41%), Gaps = 21/116 (18%) Query: 360 GTKTVIPGRVIGKFSIRLVPHMNVSAVEKQVTRHLEDVFSKR----------NSSNKMVV 409 G V V F + V +M +E+Q +VF + + S + Sbjct: 108 GQHGVATATVAAMFGLECVVYMGAEDIERQAL----NVFRMKLLGAKVRPVTSGSRTLKD 163 Query: 410 SMTLGLHPWIANIDDTQYLAAKRAIRTVFGTEPD--MIRDGSTIPIAKMFQEIVHK 463 ++ + W+ N++DT Y+ I +V G P M+RD ++ + Q+I+ K Sbjct: 164 AINEAMRDWVTNVEDTFYI-----IGSVVGPHPYPMMVRDFQSVIGEEARQQILEK 214 >6IGZ-3 nrPDB Length = 281 Score = 28.9 bits (63), Expect = 4.9, Method: Compositional matrix adjust. Identities = 17/51 (33%), Positives = 25/51 (49%) Query: 105 GQSLPIPPIILAELGSDPTKGTVCFYGHLDVQPADRGDGWLTDPYVLTEVD 155 G + I P IL+ LG P + +Y + + PA D + DPY L V+ Sbjct: 113 GAAGCITPEILSSLGVIPESTGIVWYRNGVIPPAGSSDVYWVDPYTLFFVE 163 >6BP7-A nrPDB Length = 934 Score = 28.9 bits (63), Expect = 5.2, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 20/109 (18%) Query: 51 QTLKEWVAIESDSVQPVPRFRQELFRMMAVAADTLQRLGARVASVDMGPQQLPDGQSLPI 110 +T +EW+ D+ VP +E+ ++ + LG R V + P PDG++ Sbjct: 317 RTGEEWLVTVQDTEAHVPDVYEEVLGVVPITT-----LGPRHYCVILDPMG-PDGKN--- 367 Query: 111 PPIILAELGSDPT-KGTVCFYGHLDVQPADRGDGWLTDPYVLTEVDGKL 158 +LG KG F+ +QP +R + + D YVL+E G L Sbjct: 368 ------QLGQKRVVKGEKSFF----LQPGERLERGIQDVYVLSEQQGLL 406 >5KIN-B nrPDB Length = 407 Score = 28.9 bits (63), Expect = 6.0, Method: Compositional matrix adjust. Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 7/44 (15%) Query: 410 SMTLGLHPWIANIDDTQYLAAKRAIRTVFGTE--PDMIRDGSTI 451 ++ L W+ANIDDT Y+ + + G P+++RD ++ Sbjct: 173 AVNAALRSWVANIDDTHYI-----LGSALGPHPFPEIVRDFQSV 211 >3R3J-A nrPDB Length = 456 Score = 28.1 bits (61), Expect = 8.2, Method: Compositional matrix adjust. Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 10/77 (12%) Query: 262 SGTFGGILHEPMADLVALLGSLVDSSGHILVPGIYDEVVPLTEEEINTYKAI----HLDL 317 SG L E + + A++ ++ DS+G+IL P + T+E++N I L L Sbjct: 247 SGNVAQYLVEKLIEKGAIVLTMSDSNGYILEPNGF------TKEQLNYIMDIKNNQRLRL 300 Query: 318 EEYRNSSRVEKFLFDTK 334 +EY S+ K+ + K Sbjct: 301 KEYLKYSKTAKYFENQK 317 >2RB7-A nrPDB Length = 364 Score = 28.1 bits (61), Expect = 9.6, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 17/92 (18%) Query: 122 PTKGT--VCFYGHLDVQPADRGDGWLTDPYVLTEVDGKLYGRGATDNKGPVLAW------ 173 P KG + H+DV A+ D +V + +LYGRGA D+K V Sbjct: 61 PEKGRAGLLLMAHIDVVDAE------DDLFVPRVENDRLYGRGANDDKYAVALGLVMFRD 114 Query: 174 -INAVSAFRALEQDLPVNIKFIIEGMEEAGSV 204 +NA+ A ++D+ + + +I G EE G + Sbjct: 115 RLNALKAAGRSQKDMALGL--LITGDEEIGGM 144 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 3DLJ-A nrPDB 802 0.0 2ZOF-A nrPDB 776 0.0 4RUH-A nrPDB 772 0.0 4G1P-A nrPDB 670 0.0 4O23-A nrPDB 178 6e-45 3ISZ-A nrPDB 171 8e-43 4H2K-A nrPDB 158 6e-39 3KHX-A nrPDB 148 5e-36 1Q7L-A nrPDB 146 2e-35 4ONW-A nrPDB 146 3e-35 3PFO-A nrPDB 130 1e-30 1LFW-A nrPDB 110 1e-24 Sequences not found previously or not previously below threshold: 1CG2-A nrPDB 72 5e-13 3CT9-A nrPDB 59 6e-09 5XOY-A nrPDB 54 1e-07 4Q7A-A nrPDB 52 8e-07 2RB7-A nrPDB 51 1e-06 3GB0-A nrPDB 48 9e-06 3RZA-A nrPDB 47 2e-05 2F7V-A nrPDB 44 1e-04 3MRU-A nrPDB 40 0.002 3TX8-A nrPDB 39 0.004 2GRE-A nrPDB 37 0.017 5GNE-A nrPDB 33 0.26 1FNO-A nrPDB 31 1.1 4QI7-A nrPDB 31 1.4 4C00-A nrPDB 30 1.9 4BZA-A nrPDB 30 1.9 1VIX-A nrPDB 30 2.5 5DS0-A nrPDB 29 4.3 4EMY-A nrPDB 29 5.5 2QRY-A nrPDB 28 9.3 >3DLJ-A nrPDB Length = 485 Score = 802 bits (2071), Expect = 0.0, Method: Composition-based stats. Identities = 481/485 (99%), Positives = 482/485 (99%) Query: 23 GMFSSPSPPPALLEKVFQYIDLHQDEFVQTLKEWVAIESDSVQPVPRFRQELFRMMAVAA 82 G SPSPPPALLEKVFQYIDLHQDEFVQTLKEWVAIESDSVQPVPRFRQELFRMMAVAA Sbjct: 1 GAMDSPSPPPALLEKVFQYIDLHQDEFVQTLKEWVAIESDSVQPVPRFRQELFRMMAVAA 60 Query: 83 DTLQRLGARVASVDMGPQQLPDGQSLPIPPIILAELGSDPTKGTVCFYGHLDVQPADRGD 142 DTLQRLGARVASVDMGPQQLPDGQSLPIPP+ILAELGSDPTKGTVCFYGHLDVQPADRGD Sbjct: 61 DTLQRLGARVASVDMGPQQLPDGQSLPIPPVILAELGSDPTKGTVCFYGHLDVQPADRGD 120 Query: 143 GWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVSAFRALEQDLPVNIKFIIEGMEEAG 202 GWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVSAFRALEQDLPVNIKFIIEGMEEAG Sbjct: 121 GWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVSAFRALEQDLPVNIKFIIEGMEEAG 180 Query: 203 SVALEELVEKEKDRFFSGVDYIVISDNLWISQRKPAITYGTRGNSYFMVEVKCRDQDFHS 262 SVALEELVEKEKDRFFSGVDYIVISDNLWISQRKPAITYGTRGNSYFMVEVKCRDQDFHS Sbjct: 181 SVALEELVEKEKDRFFSGVDYIVISDNLWISQRKPAITYGTRGNSYFMVEVKCRDQDFHS 240 Query: 263 GTFGGILHEPMADLVALLGSLVDSSGHILVPGIYDEVVPLTEEEINTYKAIHLDLEEYRN 322 GTFGGILHEPMADLVALLGSLVDSSGHILVPGIYDEVVPLTEEEINTYKAIHLDLEEYRN Sbjct: 241 GTFGGILHEPMADLVALLGSLVDSSGHILVPGIYDEVVPLTEEEINTYKAIHLDLEEYRN 300 Query: 323 SSRVEKFLFDTKEEILMHLWRYPSLSIHGIEGAFDEPGTKTVIPGRVIGKFSIRLVPHMN 382 SSRVEKFLFDTKEEILMHLWRYPSLSIHGIEGAFDEPGTKTVIPGRVIGKFSIRLVPHMN Sbjct: 301 SSRVEKFLFDTKEEILMHLWRYPSLSIHGIEGAFDEPGTKTVIPGRVIGKFSIRLVPHMN 360 Query: 383 VSAVEKQVTRHLEDVFSKRNSSNKMVVSMTLGLHPWIANIDDTQYLAAKRAIRTVFGTEP 442 VSAVEKQVTRHLEDVFSKRNSSNKMVVSMTLGLHPWIANIDDTQYLAAKRAIRTVFGTEP Sbjct: 361 VSAVEKQVTRHLEDVFSKRNSSNKMVVSMTLGLHPWIANIDDTQYLAAKRAIRTVFGTEP 420 Query: 443 DMIRDGSTIPIAKMFQEIVHKSVVLIPLGAVDDGEHSQNEKINRWNYIEGTKLFAAFFLE 502 DMIRDGSTIPIAKMFQEIVHKSVVLIPLGAVDDGEHSQNEKINRWNYIEGTKLFAAFFLE Sbjct: 421 DMIRDGSTIPIAKMFQEIVHKSVVLIPLGAVDDGEHSQNEKINRWNYIEGTKLFAAFFLE 480 Query: 503 MAQLH 507 MAQLH Sbjct: 481 MAQLH 485 >2ZOF-A nrPDB Length = 479 Score = 776 bits (2003), Expect = 0.0, Method: Composition-based stats. Identities = 257/474 (54%), Positives = 338/474 (71%), Gaps = 2/474 (0%) Query: 33 ALLEKVFQYIDLHQDEFVQTLKEWVAIESDSVQPVPRFRQELFRMMAVAADTLQRLGARV 92 + L+ VFQYID +QD +V+ L EWVAI+S V P R E+ RMM VAA +QRLG V Sbjct: 6 SALKAVFQYIDENQDRYVKKLAEWVAIQS--VSAWPEKRGEIRRMMEVAAADVQRLGGSV 63 Query: 93 ASVDMGPQQLPDGQSLPIPPIILAELGSDPTKGTVCFYGHLDVQPADRGDGWLTDPYVLT 152 VD+G Q+LPDG +P+PPI+L +LGSDP K TVC YGHLDVQPA DGW ++P+ L Sbjct: 64 ELVDIGKQKLPDGSEIPLPPILLGKLGSDPQKKTVCIYGHLDVQPAALEDGWDSEPFTLV 123 Query: 153 EVDGKLYGRGATDNKGPVLAWINAVSAFRALEQDLPVNIKFIIEGMEEAGSVALEELVEK 212 E +GKLYGRG+TD+KGPV W+NA+ A++ Q++PVN++F +EGMEE+GS L+EL+ Sbjct: 124 EREGKLYGRGSTDDKGPVAGWMNALEAYQKTGQEIPVNLRFCLEGMEESGSEGLDELIFA 183 Query: 213 EKDRFFSGVDYIVISDNLWISQRKPAITYGTRGNSYFMVEVKCRDQDFHSGTFGGILHEP 272 +KD+FF VDY+ ISDN W+ + KP ITYG RG YF +EV+C D+D HSG +GG +HE Sbjct: 184 QKDKFFKDVDYVCISDNYWLGKNKPCITYGLRGICYFFIEVECSDKDLHSGVYGGSVHEA 243 Query: 273 MADLVALLGSLVDSSGHILVPGIYDEVVPLTEEEINTYKAIHLDLEEYRNSSRVEKFLFD 332 M DL++L+G LVD G IL+PGI D V P+T+EE Y I D+EE+ E L Sbjct: 244 MTDLISLMGCLVDKKGKILIPGINDAVAPVTDEEHALYDHIDFDMEEFAKDVGAETLLHS 303 Query: 333 TKEEILMHLWRYPSLSIHGIEGAFDEPGTKTVIPGRVIGKFSIRLVPHMNVSAVEKQVTR 392 K++ILMH WRYPSLS+HGIEGAF G KTVIP +V+GKFSIRLVP M V +QV+ Sbjct: 304 CKKDILMHRWRYPSLSLHGIEGAFSGSGAKTVIPRKVVGKFSIRLVPDMIPEVVSEQVSS 363 Query: 393 HLEDVFSKRNSSNKMVVSMTLGLHPWIANIDDTQYLAAKRAIRTVFGTEPDMIRDGSTIP 452 +L F++ S NK V M G PW+++ + Y A +RA++TVFG EPD+ R+G +IP Sbjct: 364 YLSKKFAELQSPNKFKVYMGHGGKPWVSDFNHPHYQAGRRALKTVFGVEPDLTREGGSIP 423 Query: 453 IAKMFQEIVHKSVVLIPLGAVDDGEHSQNEKINRWNYIEGTKLFAAFFLEMAQL 506 + FQE K+V+L+P+G+ DDG HSQNEK+NR NYIEGTK+ AA+ E++QL Sbjct: 424 VTLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRLNYIEGTKMLAAYLYEVSQL 477 >4RUH-A nrPDB Length = 475 Score = 772 bits (1993), Expect = 0.0, Method: Composition-based stats. Identities = 253/474 (53%), Positives = 337/474 (71%), Gaps = 2/474 (0%) Query: 33 ALLEKVFQYIDLHQDEFVQTLKEWVAIESDSVQPVPRFRQELFRMMAVAADTLQRLGARV 92 A L +F+YID +QD +++ L +WVAI+S V P R E+ RMM VAA +++LG V Sbjct: 2 AALTTLFKYIDENQDRYIKKLAKWVAIQS--VSAWPEKRGEIRRMMEVAAADVKQLGGSV 59 Query: 93 ASVDMGPQQLPDGQSLPIPPIILAELGSDPTKGTVCFYGHLDVQPADRGDGWLTDPYVLT 152 VD+G Q+LPDG +P+PPI+L LGSDP K TVC YGHLDVQPA DGW ++P+ L Sbjct: 60 ELVDIGKQKLPDGSEIPLPPILLGRLGSDPQKKTVCIYGHLDVQPAALEDGWDSEPFTLV 119 Query: 153 EVDGKLYGRGATDNKGPVLAWINAVSAFRALEQDLPVNIKFIIEGMEEAGSVALEELVEK 212 E DGKLYGRG+TD+KGPV WINA+ A++ Q++PVN++F +EGMEE+GS L+EL+ Sbjct: 120 ERDGKLYGRGSTDDKGPVAGWINALEAYQKTGQEIPVNVRFCLEGMEESGSEGLDELIFA 179 Query: 213 EKDRFFSGVDYIVISDNLWISQRKPAITYGTRGNSYFMVEVKCRDQDFHSGTFGGILHEP 272 KD FF VDY+ ISDN W+ ++KP ITYG RG YF +EV+C ++D HSG +GG +HE Sbjct: 180 RKDTFFKDVDYVCISDNYWLGKKKPCITYGLRGICYFFIEVECSNKDLHSGVYGGSVHEA 239 Query: 273 MADLVALLGSLVDSSGHILVPGIYDEVVPLTEEEINTYKAIHLDLEEYRNSSRVEKFLFD 332 M DL+ L+GSLVD G+IL+PGI + V +TEEE Y I D+EE+ + L Sbjct: 240 MTDLILLMGSLVDKRGNILIPGINEAVAAVTEEEHKLYDDIDFDIEEFAKDVGAQILLHS 299 Query: 333 TKEEILMHLWRYPSLSIHGIEGAFDEPGTKTVIPGRVIGKFSIRLVPHMNVSAVEKQVTR 392 K++ILMH WRYPSLS+HGIEGAF G KTVIP +V+GKFSIRLVP+M V +QVT Sbjct: 300 HKKDILMHRWRYPSLSLHGIEGAFSGSGAKTVIPRKVVGKFSIRLVPNMTPEVVGEQVTS 359 Query: 393 HLEDVFSKRNSSNKMVVSMTLGLHPWIANIDDTQYLAAKRAIRTVFGTEPDMIRDGSTIP 452 +L F++ S N+ V M G PW+++ YLA +RA++TVFG EPD+ R+G +IP Sbjct: 360 YLTKKFAELRSPNEFKVYMGHGGKPWVSDFSHPHYLAGRRAMKTVFGVEPDLTREGGSIP 419 Query: 453 IAKMFQEIVHKSVVLIPLGAVDDGEHSQNEKINRWNYIEGTKLFAAFFLEMAQL 506 + FQE K+V+L+P+G+ DDG HSQNEK+NR+NYIEGTK+ AA+ E++QL Sbjct: 420 VTLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRYNYIEGTKMLAAYLYEVSQL 473 >4G1P-A nrPDB Length = 487 Score = 670 bits (1729), Expect = 0.0, Method: Composition-based stats. Identities = 211/470 (44%), Positives = 294/470 (62%), Gaps = 6/470 (1%) Query: 35 LEKVFQYIDLHQDEFVQTLKEWVAIESDSVQPVPRFRQELFRMMAVAADTLQRLGAR-VA 93 L VFQ ID + +F L + AI+ +V R ++F ++ L + G + Sbjct: 5 LTSVFQKIDSLKPQFFSRLTK--AIQIPAVSSDESLRSKVFDKAKFISEQLSQSGFHDIK 62 Query: 94 SVDMGPQQLP-DGQSLPIPPIILAELGSDPTKGTVCFYGHLDVQPADRGDGWLTDPYVLT 152 VD+G Q P +L +PP+IL+ GSDP+K TV YGH DVQPA DGW T+P+ L Sbjct: 63 MVDLGIQPPPISTPNLSLPPVILSRFGSDPSKKTVLVYGHYDVQPAQLEDGWDTEPFKLV 122 Query: 153 --EVDGKLYGRGATDNKGPVLAWINAVSAFRALEQDLPVNIKFIIEGMEEAGSVALEELV 210 E G + GRG TD+ GP+L+WIN V AF+A Q+ PVN+ EGMEE+GS+ L+EL+ Sbjct: 123 IDEAKGIMKGRGVTDDTGPLLSWINVVDAFKASGQEFPVNLVTCFEGMEESGSLKLDELI 182 Query: 211 EKEKDRFFSGVDYIVISDNLWISQRKPAITYGTRGNSYFMVEVKCRDQDFHSGTFGGILH 270 +KE + +F GVD + ISDN W+ +KP +TYG RG +Y+ ++ D HSG FGG++ Sbjct: 183 KKEANGYFKGVDAVCISDNYWLGTKKPVLTYGLRGCNYYQTIIEGPSADLHSGIFGGVVA 242 Query: 271 EPMADLVALLGSLVDSSGHILVPGIYDEVVPLTEEEINTYKAIHLDLEEYRNSSRVEKFL 330 EPM DL+ +LGSLVDS G IL+ GI + V PLTE+E YK I +EE ++ + L Sbjct: 243 EPMIDLMQVLGSLVDSKGKILIDGIDEMVAPLTEKEKALYKDIEFSVEELNAATGSKTSL 302 Query: 331 FDTKEEILMHLWRYPSLSIHGIEGAFDEPGTKTVIPGRVIGKFSIRLVPHMNVSAVEKQV 390 +D KE+ILMH WRYPSLSIHG+EGAF G KTVIP +V GKFSIR VP M+ + V Sbjct: 303 YDKKEDILMHRWRYPSLSIHGVEGAFSAQGAKTVIPAKVFGKFSIRTVPDMDSEKLTSLV 362 Query: 391 TRHLEDVFSKRNSSNKMVVSMTLGLHPWIANIDDTQYLAAKRAIRTVFGTEPDMIRDGST 450 +H + F NS NK + W+++ + Q+ AAK+A + V+G +PD R+G + Sbjct: 363 QKHCDAKFKSLNSPNKCRTELIHDGAYWVSDPFNAQFTAAKKATKLVYGVDPDFTREGGS 422 Query: 451 IPIAKMFQEIVHKSVVLIPLGAVDDGEHSQNEKINRWNYIEGTKLFAAFF 500 IPI FQ+ ++ SV+L+P+G DDG HS NEK++ N++ G K AA+ Sbjct: 423 IPITLTFQDALNTSVLLLPMGRGDDGAHSINEKLDISNFVGGMKTMAAYL 472 >4O23-A nrPDB Length = 384 Score = 178 bits (451), Expect = 6e-45, Method: Composition-based stats. Identities = 94/447 (21%), Positives = 155/447 (34%), Gaps = 98/447 (21%) Query: 59 IESDSVQPVPRFRQELFRMMAVAADTLQRLGARVASVDMGPQQLPDGQSLPIPPIILAEL 118 I SV P + A+ L ++G + G + + P+ Sbjct: 17 ISRPSVTPDD------RDCQKLLAERLHKIGFAAEELHFGDTKNIWLRRGTKAPV----- 65 Query: 119 GSDPTKGTVCFYGHLDVQPADRGDGWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVS 178 VCF GH DV P + W + P+ E DG+LYGRGA D K + ++ A Sbjct: 66 --------VCFAGHTDVVPTGPVEKWDSPPFEPAERDGRLYGRGAADMKTSIACFVTACE 117 Query: 179 AFRALEQDLPVNIKFIIEGMEEA----GSVALEELVEKEKDRFFSGVDYIVISDNLWISQ 234 F A + +I +I EE G+ + ++++ + +DY ++ + + + Sbjct: 118 RFVAKHPNHQGSIALLITSDEEGDALDGTTKVVDVLKARDE----LIDYCIVGEPTAVDK 173 Query: 235 RKPAITYGTRGNSYFMVEVKCRDQDFHSGTFGGILHEPMADLVALLGSLVDSSGHILVPG 294 I G RG+ + VK GHI P Sbjct: 174 LGDMIKNGRRGSLSGNLTVKG------------------------------KQGHIAYPH 203 Query: 295 IYDEVVPLTEEEINTYKAIHLDLEEYRNSSRVEKFLFDTKEEILMHLWRYPSLSIHGIEG 354 + + P+ +T+ L+L + E F S I I G Sbjct: 204 L--AINPV-----HTFAPALLELTQEVWDEGNEYFPPT-------------SFQISNING 243 Query: 355 AFDEPGTKTVIPGRVIGKFSIRLVPHMNVSAVEKQVTRHLED--VFSKRNSSNKMVVSMT 412 G VIPG + KF+ R + ++++V L+ V S +T Sbjct: 244 ---GTGATNVIPGELNVKFNFRFSTESTEAGLKQRVHAILDKHGVQYDLQWSCSGQPFLT 300 Query: 413 LGLHPWIANIDDTQYLAAKRAIRTVFGTEPDMIRDGSTIPIAKMFQEIVHKSVVLIPLGA 472 + ++ A+ AI G E ++ G T F + + + LI LG Sbjct: 301 QAGK--LTDV-------ARAAIAETCGIEAELSTTGGT--SDGRFIKAIAQE--LIELGP 347 Query: 473 VDDGEHSQNEKINRWNYIEGTKLFAAF 499 + H NE + R N I KL A + Sbjct: 348 SNATIHQINENV-RLNDIP--KLSAVY 371 >3ISZ-A nrPDB Length = 377 Score = 171 bits (432), Expect = 8e-43, Method: Composition-based stats. Identities = 78/411 (18%), Positives = 138/411 (33%), Gaps = 91/411 (22%) Query: 79 AVAADTLQRLGARVASVDMGPQQLPDGQSLPIPPIILAELGSDPTKGTVCFYGHLDVQPA 138 + A+ L++LG ++ +P + ++ + F GH DV P Sbjct: 27 QIIAERLEKLGFQIE-------------WMPFNDTLNLWAKHGTSEPVIAFAGHTDVVPT 73 Query: 139 DRGDGWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVSAFRALEQDLPVNIKFIIEGM 198 + W + P+ +DG LYGRGA D KG + A I A + + I +I Sbjct: 74 GDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIALLITSD 133 Query: 199 EEA----GSVALEELVEKEKDRFFSGVDYIVISDNLWISQRKPAITYGTRGNSYFMVEVK 254 EEA G++ + E + ++ + Y ++ + + G RG+ + ++ Sbjct: 134 EEATAKDGTIHVVETLMARDEK----ITYCMVGEPSSAKNLGDVVKNGRRGSITGNLYIQ 189 Query: 255 CRDQDFHSGTFGGILHEPMADLVALLGSLVDSSGHILVPGIYDEVVPLTEEEINTYKAIH 314 GH+ P + E +KA Sbjct: 190 G------------------------------IQGHVAYPHL---------AENPIHKAAL 210 Query: 315 LDLEEYRNSSRVEKFLFDTKEEILMHLWRYPSLSIHGIEGAFDEPGTKTVIPGRVIGKFS 374 L+E + +D E +P S+ I G+ VIP + +F+ Sbjct: 211 F-LQELT------TYQWDKGNEF------FPPTSLQ-IANIHAGTGSNNVIPAELYIQFN 256 Query: 375 IRLVPHMNVSAVEKQVTRHLEDVFSKRNSSNKMVVSMTLGLHPWIANIDDTQYLAAKRAI 434 +R + ++++V LE + K + L P++ + AI Sbjct: 257 LRYCTEVTDEIIKQKVAEMLEK------HNLKYRIEWNLSGKPFLTKPGKL-LDSITSAI 309 Query: 435 RTVFGTEPDMIRDGSTIP---IAKMFQEIVHKSVVLIPLGAVDDGEHSQNE 482 G P G T IA M E+V G ++ H NE Sbjct: 310 EETIGITPKAETGGGTSDGRFIALMGAEVVE-------FGPLNSTIHKVNE 353 >4H2K-A nrPDB Length = 269 Score = 158 bits (399), Expect = 6e-39, Method: Composition-based stats. Identities = 42/203 (20%), Positives = 76/203 (37%), Gaps = 21/203 (10%) Query: 51 QTLKEWVAIESDSVQPVPRFRQELFRMMAVAADTLQRLGARVASVDMGPQQLPDGQSLPI 110 +KE V + + P + A+ L++LG ++ +P Sbjct: 2 NAMKEKVVSLAQDLIRRPSISPNDEGCQQIIAERLEKLGFQIE-------------WMPF 48 Query: 111 PPIILAELGSDPTKGTVCFYGHLDVQPADRGDGWLTDPYVLTEVDGKLYGRGATDNKGPV 170 + ++ + F GH DV P + W + P+ +DG LYGRGA D KG + Sbjct: 49 NDTLNLWAKHGTSEPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSL 108 Query: 171 LAWINAVSAFRALEQDLPVNIKFIIEGMEEA----GSVALEELVEKEKDRFFSGVDYIVI 226 A I A + + I +I EEA G++ + E + ++ + Y ++ Sbjct: 109 AAMIVAAEEYVKANPNHKGTIALLITSDEEATAKDGTIHVVETLMARDEK----ITYCMV 164 Query: 227 SDNLWISQRKPAITYGTRGNSYF 249 + + G RG + Sbjct: 165 GEPSSAKNLGDVVKNGRRGGGFL 187 >3KHX-A nrPDB Length = 492 Score = 148 bits (374), Expect = 5e-36, Method: Composition-based stats. Identities = 55/202 (27%), Positives = 80/202 (39%), Gaps = 37/202 (18%) Query: 36 EKVFQYIDLHQDEFVQTLKEWVAIES--DSVQPV------PRFRQELFRMMAVAADTLQR 87 EKV QY +D+ + LK +AIES D + P R+ L M +A R Sbjct: 27 EKVQQY----EDQIINDLKGLLAIESVRDDAKASEDAPVGPGPRKALDYMYEIA----HR 78 Query: 88 LGARVASVDMGPQQLPDGQSLPIPPIILAELGSDPTKGTVCFYGHLDVQPADRGDGWLTD 147 G VD I I A G+D G +C H+DV PA DGW ++ Sbjct: 79 DGFTTHDVDH------------IAGRIEAGKGND-VLGILC---HVDVVPAG--DGWDSN 120 Query: 148 PYVLTEVDGKLYGRGATDNKGPVLAWINAVSAFRALEQDLPVNIKFIIEGMEEAGSVALE 207 P+ + + RG D+KGP +A A+ + D I II EE+ + Sbjct: 121 PFEPVVTEDAIIARGTLDDKGPTIAAYYAIKILEDMNVDWKKRIHMIIGTDEESDWKCTD 180 Query: 208 ELVEKEKD---RFFSGVDYIVI 226 + E+ F ++ I Sbjct: 181 RYFKTEEMPTLGFAPDAEFPCI 202 >1Q7L-A nrPDB Length = 198 Score = 146 bits (368), Expect = 2e-35, Method: Composition-based stats. Identities = 37/158 (23%), Positives = 64/158 (40%), Gaps = 15/158 (9%) Query: 59 IESDSVQPVPRFRQELFRMMAVAADTLQRLGARVASVDMGPQQLPDGQSLPIPPIILAEL 118 + +VQP P + + A +T ++LG V++ P + +L Sbjct: 20 LRIRTVQPKPDYGAAV----AFFEETARQLGLGCQKVEVAPGYVV---------TVLTWP 66 Query: 119 GSDPTKGTVCFYGHLDVQPADRGDGWLTDPYV-LTEVDGKLYGRGATDNKGPVLAWINAV 177 G++PT ++ H DV P + + W DP+ + +G +Y RGA D K + ++ AV Sbjct: 67 GTNPTLSSILLNSHTDVVPVFK-EHWSHDPFEAFKDSEGYIYARGAQDMKCVSIQYLEAV 125 Query: 178 SAFRALEQDLPVNIKFIIEGMEEAGSVALEELVEKEKD 215 + P I EE G EL + + Sbjct: 126 RRLKVEGHRFPRTIHMTFVPDEEVGGHQGMELFVQRPE 163 >4ONW-A nrPDB Length = 268 Score = 146 bits (367), Expect = 3e-35, Method: Composition-based stats. Identities = 39/126 (30%), Positives = 55/126 (43%), Gaps = 8/126 (6%) Query: 128 CFYGHLDVQPADRGDGWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVSAFRALEQDL 187 F GH DV PA W T P+ T +DG L+GRGA D KG + I AV F A D Sbjct: 66 VFAGHTDVVPAGPLSQWHTPPFEPTVIDGFLHGRGAADMKGSLACMIVAVERFIAEHPDH 125 Query: 188 PVNIKFIIEGMEEA----GSVALEELVEKEKDRFFSGVDYIVISDNLWISQRKPAITYGT 243 +I F+I EE G+V + E + + +D ++ + + G Sbjct: 126 QGSIGFLITSDEEGPFINGTVRVVETLMARNE----LIDMCIVGEPSSTLAVGDVVKNGR 181 Query: 244 RGNSYF 249 RG + Sbjct: 182 RGGGFL 187 >3PFO-A nrPDB Length = 433 Score = 130 bits (327), Expect = 1e-30, Method: Composition-based stats. Identities = 52/228 (22%), Positives = 85/228 (37%), Gaps = 20/228 (8%) Query: 36 EKVFQYIDLHQDEFVQTLKEWVA--IESDSVQPVPRFRQELFRMMAVAADTLQRLGARVA 93 + + Q + D ++ ++ SV+ +QE + A + +A Sbjct: 11 DAITQSLRAAVDRNFNDQVAFLQRMVQFRSVRGEEAPQQE-WLAQQFADRGYKVDTFSLA 69 Query: 94 SVDMGPQQ---LPDGQSLPIPPIILAELGSDPTKGTVCFYGHLDVQPADRGDGWLTDPYV 150 VD+ D ++A SD ++ GH+DV P D W PY Sbjct: 70 DVDIASHPKAAPMDTIDPAGSMQVVATADSDGKGRSLILQGHIDVVPEGPVDLWSDPPYE 129 Query: 151 LTEVDGKLYGRGATDNKGPVLAWINAVSAFRALE--QDLPVNIKFIIEGMEEAGSVALEE 208 DG + GRGA D KG V A I A+ A R D V+++ + E E G+ AL Sbjct: 130 AKVRDGWMIGRGAQDMKGGVSAMIFALDAIRTAGYAPDARVHVQTVTE-EESTGNGALST 188 Query: 209 LVEKEKDRFFSGVDYIVISDNLWISQRKPAITYGTRGNSYFMVEVKCR 256 L+ + D +I + +T G +F + V+ Sbjct: 189 LMRGYR------ADACLIPEPT-----GHTLTRAQVGAVWFRLRVRGT 225 >1LFW-A nrPDB Length = 470 Score = 110 bits (275), Expect = 1e-24, Method: Composition-based stats. Identities = 39/177 (22%), Positives = 74/177 (41%), Gaps = 25/177 (14%) Query: 43 DLHQDEFVQTLKEWVAIES-----DSVQPVPRFRQELFRMMAVAADTLQRLGARVASVDM 97 + +D ++ L+E +AI+S ++ + P + + M + +R G + Sbjct: 10 EAKKDAILKDLEELIAIDSSEDLENATEEYPVGKGPVDAMTKFLS-FAKRDGFDTENF-- 66 Query: 98 GPQQLPDGQSLPIPPIILAELGSDPTKGTVCFYGHLDVQPADRGDGWLTDPYVLT-EVDG 156 + G D G + GH+DV PA +GW DP+ + + +G Sbjct: 67 ----------ANYAGRVNFGAG-DKRLGII---GHMDVVPAG--EGWTRDPFKMEIDEEG 110 Query: 157 KLYGRGATDNKGPVLAWINAVSAFRALEQDLPVNIKFIIEGMEEAGSVALEELVEKE 213 ++YGRG+ D+KGP L + + I F++ EE V ++ ++ E Sbjct: 111 RIYGRGSADDKGPSLTAYYGMLLLKEAGFKPKKKIDFVLGTNEETNWVGIDYYLKHE 167 >1CG2-A nrPDB Length = 393 Score = 72.0 bits (175), Expect = 5e-13, Method: Composition-based stats. Identities = 43/226 (19%), Positives = 78/226 (34%), Gaps = 26/226 (11%) Query: 38 VFQYIDLHQDEFVQTLKEWVAIESDSVQPVPRFRQELFRMMAVAADTLQRLGARVASVDM 97 +FQ Q ++TL++ V IE+ + + + L+ LG V Sbjct: 10 LFQAATDEQPAVIKTLEKLVNIETGTGDA-----EGIAAAGNFLEAELKNLGFTVTRSKS 64 Query: 98 GPQQLPDGQSLPIPPIILAELGSDPTKGTVCFYGHLDVQPADRGDGWLTDPYVLTEVDGK 157 + D I I G + + H+D P+ + K Sbjct: 65 AGLVVGDN----IVGKIKGRGGKN-----LLLMSHMDTV--YLKGILAKAPFRVE--GDK 111 Query: 158 LYGRGATDNKGPVLAWINAVSAFRALEQDLPVNIKFIIEGMEEAGSVALEELVEKEKDRF 217 YG G D+KG ++ + + I + EE GS +L+++E Sbjct: 112 AYGPGIADDKGGNAVILHTLKLLKEYGVRDYGTITVLFNTDEEKGSFGSRDLIQEEA--- 168 Query: 218 FSGVDYIVISDNLWISQRKPAITYGTRGNSYFMVEVKCRDQDFHSG 263 DY++ + K ++ GT G +Y V + + H+G Sbjct: 169 -KLADYVLSFEPTSAGDEK--LSLGTSGIAYVQVNITGKAS--HAG 209 >3CT9-A nrPDB Length = 356 Score = 58.6 bits (140), Expect = 6e-09, Method: Composition-based stats. Identities = 25/111 (22%), Positives = 46/111 (41%), Gaps = 10/111 (9%) Query: 121 DPTKGTVCFYGHLDVQPADRGDGWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVSAF 180 D K T+ H+D +GW DP+ E +GKLYG G+ D V++ + Sbjct: 63 DLKKPTILLNSHIDTV--KPVNGWRKDPFTPREENGKLYGLGSNDAGASVVSLLQVFLQL 120 Query: 181 RALEQDLPVNIKFIIEGMEE-AGSVALEELVEKEKDRFFSGVDYIVISDNL 230 Q+ N+ ++ EE +G +E ++ V + ++ + Sbjct: 121 CRTSQNY--NLIYLASCEEEVSGKEGIESVLPG-----LPPVSFAIVGEPT 164 >5XOY-A nrPDB Length = 373 Score = 54.3 bits (129), Expect = 1e-07, Method: Composition-based stats. Identities = 50/209 (23%), Positives = 72/209 (34%), Gaps = 48/209 (22%) Query: 67 VPRFRQELFRMMAVAADTLQRLGAR--VASVDMGPQQLPDGQSLPIPPIILAELGSDPTK 124 +P + + A+ +Q+LG + V D Q+ +G Sbjct: 30 IPSPSGKERLVAEYLAEGMQKLGLKGFVDEADNARGQVGEGPV----------------- 72 Query: 125 GTVCFYGHLDVQPADRGDGWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVSAFRALE 184 V GH+D P P L G+L+GRGA D KGP +A I A + Sbjct: 73 -QVVLLGHIDTVPGQI-------PVRLE--GGRLFGRGAVDAKGPFVAMIFAAAGLSEEA 122 Query: 185 QDLPVNIKFIIEGMEEAGSVALEELVEKEKDRFFSGVDYIVISDNL-WISQRKPAITYGT 243 + + + + EEA S V Y VI + W IT G Sbjct: 123 RK-RLTVHLVGATEEEAPSSKGARFVAPRLKPH-----YAVIGEPSGWEG-----ITLGY 171 Query: 244 RGNSYFMVEVKCRDQDFHSGTFGGILHEP 272 +G + VK R + H F HEP Sbjct: 172 KG----RLLVKARREKDH---FHSAHHEP 193 >4Q7A-A nrPDB Length = 370 Score = 51.6 bits (122), Expect = 8e-07, Method: Composition-based stats. Identities = 44/187 (23%), Positives = 63/187 (33%), Gaps = 35/187 (18%) Query: 93 ASVDMGPQQLPDGQSLPIPPIILAELGSDPTKGTVCFYGHLDVQPADRGDGWLTDPYVLT 152 +G Q PDG + G P + GH+D P + + Sbjct: 42 QMAALGYQAEPDG-----AGNAVGTRGEGP--REIMLLGHIDTVPGEV---------PVQ 85 Query: 153 EVDGKLYGRGATDNKGPVLAWINAVSAFRALEQDLPVNIKFIIEG--MEEAGSVALEELV 210 VDG LYGRGA D KGP+ ++ A LP ++ + G EE S + Sbjct: 86 VVDGVLYGRGAVDAKGPLATFVVA-----GARAKLPPGVRLTVVGAVEEEVMSSRGARHL 140 Query: 211 EKEKDRFFSGVDYIVISDNL-WISQRKPAITYGTRGNSYFMVEVKCRDQDFHSGTFGGIL 269 ++ D +VI + W + G RG+ V HS Sbjct: 141 IATREAP----DAVVIGEPSGW-----DGVVLGYRGSVALEYRVTVPMS--HSAGPEATA 189 Query: 270 HEPMADL 276 E AD Sbjct: 190 AELAADF 196 >2RB7-A nrPDB Length = 364 Score = 50.9 bits (120), Expect = 1e-06, Method: Composition-based stats. Identities = 32/149 (21%), Positives = 52/149 (34%), Gaps = 27/149 (18%) Query: 59 IESDSVQPVPRFRQELFRMMAVAADTLQRLGARVASVDMGPQQLPDGQSLPIPPIILAEL 118 I S+ P ++ R D + G +D +P LP Sbjct: 16 IRFPSMHSRPE---QISRCAGFIMDWCAQNGIHAERMDH--DGIPSVMVLPEKGR----- 65 Query: 119 GSDPTKGTVCFYGHLDVQPADRGDGWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINA-- 176 + H+DV A D +V + +LYGRGA D+K V + Sbjct: 66 ------AGLLLMAHIDVVDA------EDDLFVPRVENDRLYGRGANDDKYAVALGLVMFR 113 Query: 177 --VSAFRALEQDLP-VNIKFIIEGMEEAG 202 ++A +A + + + +I G EE G Sbjct: 114 DRLNALKAAGRSQKDMALGLLITGDEEIG 142 >3GB0-A nrPDB Length = 373 Score = 48.2 bits (113), Expect = 9e-06, Method: Composition-based stats. Identities = 38/188 (20%), Positives = 68/188 (36%), Gaps = 28/188 (14%) Query: 45 HQDEFVQTLKEWVAIESDSVQPVPRFRQELFRMMAVAADTLQRLGARVASVDMGPQQLPD 104 +Q+ V E V ++S++ +F E+ V LG V++ Sbjct: 4 NQERLVNEFMELVQVDSET-----KFEAEI---CKVLTKKFTDLG-----VEVFEDDTMA 50 Query: 105 GQSLPIPPIILAELGSDPTKGTVCFYGHLDVQPADRGDGWLTDPYVLTEVDGKLYGRGAT 164 +I + T+ F H+D G+G + DG + G T Sbjct: 51 VTGHGAGNLICTLPATKDGVDTIYFTSHMDTV--VPGNG-----IKPSIKDGYIVSDGTT 103 Query: 165 ----DNKGPVLAWINAVSAFRALEQDLPVNIKFIIEGMEEAGSVALEELVEKEKDRFFSG 220 D+K + + A+ + I+FII EE+G V + L +++R + Sbjct: 104 ILGADDKAGLASMFEAIRVLKEKNIPH-GTIEFIITVGEESGLVGAKAL---DRERITAK 159 Query: 221 VDYIVISD 228 Y + SD Sbjct: 160 YGYALDSD 167 >3RZA-A nrPDB Length = 396 Score = 47.0 bits (110), Expect = 2e-05, Method: Composition-based stats. Identities = 33/170 (19%), Positives = 60/170 (35%), Gaps = 24/170 (14%) Query: 45 HQDEFVQTLKEWVAIESDSVQPVPRFRQELFRMMAVAADTLQRLGARVASVDMGPQQLPD 104 ++ + T E V I+S++ + + + LG V + Sbjct: 22 NEQRLLNTFLELVQIDSET--------GNESTIQPILKEKFIALGLDVKEDEAAKHPKLG 73 Query: 105 GQSLPIPPIILAELGSDPTKGTVCFYGHLD-VQPADRGDGWLTDPYVLTEVDGKLYGRGA 163 +L E G P + H+D V PA + + DG +Y G Sbjct: 74 ANNLVCTMNSTIEEGEVPK---LYLTSHMDTVVPAINVK-------PIVKDDGYIYSDGT 123 Query: 164 T----DNKGPVLAWINAVSAFRALEQDLPVNIKFIIEGMEEAGSVALEEL 209 T D+K + A + + + + I+F+I EE+G + +EL Sbjct: 124 TILGADDKAGLAAMLEVLQVIKEQQIPH-GQIQFVITVGEESGLIGAKEL 172 >2F7V-A nrPDB Length = 369 Score = 44.3 bits (103), Expect = 1e-04, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 56/184 (30%), Gaps = 29/184 (15%) Query: 47 DEFVQTLKEWVAIESDSVQPVPRFRQELFRMMAVAADTLQRLGARVASVDMGPQQLPDGQ 106 D TL+ + S + PR + L G +V +D G + Sbjct: 6 DLLASTLEHLETLVSFDTRNPPRAIAAEGGIFDYLRAQLP--GFQVEVIDHGDGAVSLYA 63 Query: 107 SLPIPPIILAELGSDPTKGTVCFYGHLDVQPADRGDGWLTDPYVLTEVDGKLYGRGATDN 166 P + F HLD P W DP+V+ + ++ G G D Sbjct: 64 VRGTPKYL--------------FNVHLDTVPDSP--HWSADPHVMRRTEDRVIGLGVCDI 107 Query: 167 KGPVLAWINAVSAFRALEQDLPVNIKFIIEGMEEAGSVALEELVEKEKDRFFSGVDYIVI 226 KG A + A +A F+ EEA + D +++ Sbjct: 108 KGAAAALVAAANAGDGDA-------AFLFSSDEEANDPRCIAAFLARGLPY----DAVLV 156 Query: 227 SDNL 230 ++ Sbjct: 157 AEPT 160 >3MRU-A nrPDB Length = 490 Score = 40.1 bits (92), Expect = 0.002, Method: Composition-based stats. Identities = 28/153 (18%), Positives = 54/153 (35%), Gaps = 11/153 (7%) Query: 60 ESDSVQPVPRFRQELFRMMAVAADTLQRLGARVASVDMGPQQLPDGQSLPIPPIILAELG 119 E ++ P P Q ++ ++ + V +Q D + P + + + Sbjct: 7 EISTLSPAP-LWQFFDKICSIPHPSKHEEALAQYIVTWATEQGFDVRRDPTGNVFIKKPA 65 Query: 120 SDP--TKGTVCFYGHLDVQPADRGD---GWLTDPYVLTEVDGKLYGRGAT--DNKGPVLA 172 + K V H+D+ P D + DP + +G T + G +A Sbjct: 66 TPGMENKKGVVLQAHIDMVPQKNEDTDHDFTQDPIQPYIDGEWVTAKGTTLGADNGIGMA 125 Query: 173 WINAVSAFRALEQDLPVNIKFIIEGMEEAGSVA 205 AV A + ++ I+ ++ EEAG Sbjct: 126 SCLAVLASKEIKH---GPIEVLLTIDEEAGMTG 155 >3TX8-A nrPDB Length = 369 Score = 39.3 bits (90), Expect = 0.004, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 51/157 (32%), Gaps = 22/157 (14%) Query: 107 SLPIPPIILAELGSDPTKGT-------VCFYGHLDVQPADRGDGWLTDPYVLTEVDGKLY 159 +L +P + + ++ T V GH+D P D DG +Y Sbjct: 45 NLNLPGVEVFRFNNNVLARTNRGLASRVMLAGHIDTVPIA-------DNLPSRVEDGIMY 97 Query: 160 GRGATDNKGPVLAWINAVSAFRALEQDLPVNIKFIIEGMEEAGSVALEELVEKEKDR-FF 218 G G D K + +++ + A +L ++ I EE L L + + Sbjct: 98 GCGTVDMKSGLAVYLHTFATL-ATSTELKHDLTLIAYECEEVAD-HLNGLGHIRDEHPEW 155 Query: 219 SGVDYIVISDNLWISQRKPAITYGTRGNSYFMVEVKC 255 D ++ + I G +GN V Sbjct: 156 LAADLALLGEPT-----GGWIEAGCQGNLRIKVTAHG 187 >2GRE-A nrPDB Length = 349 Score = 37.4 bits (85), Expect = 0.017, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 23/65 (35%), Gaps = 1/65 (1%) Query: 141 GDGWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVSAFRALEQDLPVNIKFIIEGMEE 200 GD DP V G + R D+K V + + + LP F+I EE Sbjct: 163 GDFVSFDPRVQITESGYIKSR-HLDDKVSVAILLKLIKRLQDENVTLPYTTHFLISNNEE 221 Query: 201 AGSVA 205 G Sbjct: 222 IGYGG 226 >5GNE-A nrPDB Length = 375 Score = 33.1 bits (74), Expect = 0.26, Method: Composition-based stats. Identities = 33/192 (17%), Positives = 61/192 (31%), Gaps = 32/192 (16%) Query: 24 MFSSPSPPP----ALLEKVFQYIDLHQDEFVQTLKEWVAIESDSVQPVPRFRQELFRMMA 79 S+ +P P A + +F+ ID + QT + + + S + + Sbjct: 87 SISTANPYPINHEAQVHSLFEQIDPAK--IWQTNQHLTSYINRSAKSRTGVEAAQWFKQQ 144 Query: 80 VAADTLQRLGARVASVDMGPQQLPDGQSLPIPPIILAELGSDPTKGTVCFYGHLDVQPAD 139 DTL + V+ + I P ++ +G D + H+D Sbjct: 145 F--DTLAQD-YGRKDVE---SYFVKTGNKFIQPSVVTVIGKDKPGEAIVIGAHIDTL--- 195 Query: 140 RGDGWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVSAFRALEQDLPVNIKFIIEGME 199 DG + GA D+ + + + +L I FI E Sbjct: 196 ---------------DGNM--PGADDDSSGISVELEMARVVFSSNFELNRPIYFIAYAAE 238 Query: 200 EAGSVALEELVE 211 E G + +V+ Sbjct: 239 ERGLIGSGYVVQ 250 >1FNO-A nrPDB Length = 417 Score = 31.2 bits (69), Expect = 1.1, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 24/65 (36%), Gaps = 1/65 (1%) Query: 164 TDNKGPVLAWINAVSAFRALEQDLPVNIKFIIEGMEEAGSVALEELVEKEKDRFFSGVDY 223 D+K V + A++ + +IK EE G A VE ++ VD Sbjct: 139 ADDKAGVAEIMTALAVLKG-NPIPHGDIKVAFTPDEEVGKGAKHFDVEAFGAQWAYTVDG 197 Query: 224 IVISD 228 + + Sbjct: 198 GGVGE 202 >4QI7-A nrPDB Length = 806 Score = 30.8 bits (68), Expect = 1.4, Method: Composition-based stats. Identities = 24/89 (26%), Positives = 32/89 (35%), Gaps = 21/89 (23%) Query: 411 MTLGLHPWIANIDDTQYLA-AKRAIRTVFGT--EPDMIRDGST-IPIAKMFQ-------- 458 M + +NI + Y A A +A +TV GT P +T +P F Sbjct: 180 MGQWGAAFDSNIANPSYTAWAAKATKTVTGTCSGPVTTSIAATPVPTGVSFDYIVVGGGA 239 Query: 459 ---------EIVHKSVVLIPLGAVDDGEH 478 KSV+LI G GEH Sbjct: 240 GGIPVADKLSESGKSVLLIEKGFASTGEH 268 >4C00-A nrPDB Length = 559 Score = 30.4 bits (67), Expect = 1.9, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 29/83 (34%), Gaps = 11/83 (13%) Query: 54 KEWVAIESDSVQPVPRFRQELFRMMAVAADTLQRLGARVASVDMGPQQLPDGQSLPIPPI 113 + IESD V P RFR + + + L+ LG +++ + P + Sbjct: 23 AQLSTIESDEVTPDRRFRARVDDAIR---EGLKALGYYQPTIEFDLRPPPKKGRQVLIAK 79 Query: 114 ILAELGSDPTKGTVCFYGHLDVQ 136 + T G G DV Sbjct: 80 V--------TPGVPVLIGGTDVV 94 >4BZA-A nrPDB Length = 261 Score = 30.4 bits (67), Expect = 1.9, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 29/83 (34%), Gaps = 11/83 (13%) Query: 54 KEWVAIESDSVQPVPRFRQELFRMMAVAADTLQRLGARVASVDMGPQQLPDGQSLPIPPI 113 + IESD V P RFR + + + L+ LG +++ + P + Sbjct: 21 AQLSTIESDEVTPDRRFRARVDDAIR---EGLKALGYYQPTIEFDLRPPPKKGRQVLIAK 77 Query: 114 ILAELGSDPTKGTVCFYGHLDVQ 136 + T G G DV Sbjct: 78 V--------TPGVPVLIGGTDVV 92 >1VIX-A nrPDB Length = 420 Score = 30.1 bits (66), Expect = 2.5, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 25/65 (38%), Gaps = 1/65 (1%) Query: 164 TDNKGPVLAWINAVSAFRALEQDLPVNIKFIIEGMEEAGSVALEELVEKEKDRFFSGVDY 223 D+K + + A++ + + +I+ EE G A V+ R+ VD Sbjct: 141 ADDKAGIAEIMTALAVLQQKKIPH-GDIRVAFTPDEEVGKGAKHFDVDAFDARWAYTVDG 199 Query: 224 IVISD 228 + + Sbjct: 200 GGVGE 204 >5DS0-A nrPDB Length = 359 Score = 29.3 bits (64), Expect = 4.3, Method: Composition-based stats. Identities = 10/59 (16%), Positives = 21/59 (35%), Gaps = 3/59 (5%) Query: 144 WLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVSAFRALEQDLPVNIKFIIEGMEEAG 202 W P+ +G++ A D++ + A+ + + P + EE G Sbjct: 162 WS--PFS-VIQNGRVAMGKAFDDRIGAFVLMEAIRRMKDQGIEHPNTVYGSATVQEEVG 217 >4EMY-A nrPDB Length = 413 Score = 28.9 bits (63), Expect = 5.5, Method: Composition-based stats. Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%) Query: 278 ALLGSLVDSSGHIL-VPGIYDEVVPLTEEEINTYKAIH 314 A LG+L+D G I+ +P +YD + + I +Y I Sbjct: 42 AALGTLLDDKGKIIALPSVYDRLDEMDRSHIASYAPIE 79 >2QRY-A nrPDB Length = 330 Score = 28.1 bits (61), Expect = 9.3, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 23/54 (42%) Query: 420 ANIDDTQYLAAKRAIRTVFGTEPDMIRDGSTIPIAKMFQEIVHKSVVLIPLGAV 473 AN + YL + A RT +P++ + ++ FQ + + P+ V Sbjct: 237 ANFSEGHYLQVEVAARTAASKQPELAQKFLQFMVSPAFQNAIPTGNWMYPVANV 290 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.312 0.131 0.356 Lambda K H 0.267 0.0400 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 18,891,551 Number of Sequences: 36641 Number of extensions: 756933 Number of successful extensions: 2048 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 36 Number of HSP's successfully gapped in prelim test: 27 Number of HSP's that attempted gapping in prelim test: 1987 Number of HSP's gapped (non-prelim): 65 length of query: 507 length of database: 10,336,785 effective HSP length: 101 effective length of query: 406 effective length of database: 6,636,044 effective search space: 2694233864 effective search space used: 2694233864 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 61 (28.1 bits)