BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q96GX9 (242 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 4M6R-A nrPDB 467 e-132 2IRP-A nrPDB 73 1e-13 1E4A-P nrPDB 41 4e-04 4C25-A nrPDB 40 8e-04 1K0W-A nrPDB 33 0.14 5FOZ-B nrPDB 32 0.32 4XMN-B nrPDB 30 0.64 2W40-A nrPDB 30 0.65 5MUL-A nrPDB 29 1.6 1F37-A nrPDB 29 1.7 4AXH-A nrPDB 27 5.5 >4M6R-A nrPDB Length = 224 Score = 467 bits (1202), Expect = e-132, Method: Compositional matrix adjust. Identities = 223/223 (100%), Positives = 223/223 (100%) Query: 20 DKEHPRYLIPELCKQFYHLGWVTGTGGGISLKHGDEIYIAPSGVQKERIQPEDMFVCDIN 79 DKEHPRYLIPELCKQFYHLGWVTGTGGGISLKHGDEIYIAPSGVQKERIQPEDMFVCDIN Sbjct: 2 DKEHPRYLIPELCKQFYHLGWVTGTGGGISLKHGDEIYIAPSGVQKERIQPEDMFVCDIN 61 Query: 80 EKDISGPSPSKKLKKSQCTPLFMNAYTMRGAGAVIHTHSKAAVMATLLFPGREFKITHQE 139 EKDISGPSPSKKLKKSQCTPLFMNAYTMRGAGAVIHTHSKAAVMATLLFPGREFKITHQE Sbjct: 62 EKDISGPSPSKKLKKSQCTPLFMNAYTMRGAGAVIHTHSKAAVMATLLFPGREFKITHQE 121 Query: 140 MIKGIKKCTSGGYYRYDDMLVVPIIENTPEEKDLKDRMAHAMNEYPDSCAVLVRRHGVYV 199 MIKGIKKCTSGGYYRYDDMLVVPIIENTPEEKDLKDRMAHAMNEYPDSCAVLVRRHGVYV Sbjct: 122 MIKGIKKCTSGGYYRYDDMLVVPIIENTPEEKDLKDRMAHAMNEYPDSCAVLVRRHGVYV 181 Query: 200 WGETWEKAKTMCECYDYLFDIAVSMKKVGLDPSQLPVGENGIV 242 WGETWEKAKTMCECYDYLFDIAVSMKKVGLDPSQLPVGENGIV Sbjct: 182 WGETWEKAKTMCECYDYLFDIAVSMKKVGLDPSQLPVGENGIV 224 >2IRP-A nrPDB Length = 208 Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 51/194 (26%), Positives = 86/194 (44%), Gaps = 13/194 (6%) Query: 28 IPELCKQFYHLGWVTGTGGGISLKHGDE-IYIAPSGVQKERIQPEDMFVCDINEKDISGP 86 I E + + GWV T G IS K +E I I SG K ++ PED+ + D + + G Sbjct: 16 IIEAGRILHSRGWVPATSGNISAKVSEEYIAITASGKHKGKLTPEDILLIDYEGRPVGGG 75 Query: 87 SPSKKLKKSQCTPLFMNAYTMR-GAGAVIHTHSKAAVMATLLFPGREFKITHQEMIKGIK 145 PS + T L Y + AV+HTHS A + +++ ++ E++K Sbjct: 76 KPSAE------TLLHTTVYKLFPEVNAVVHTHSPNATVISIVEKKDFVELEDYELLKAFP 129 Query: 146 KCTSGGYYRYDDMLVVPIIENTPEEKDLKDRMAHAMNEYPDSCAVLVRRHGVYVWGETWE 205 + ++ + +PI N L + + D L+R HG+Y WG + E Sbjct: 130 DI-----HTHEVKIKIPIFPNEQNIPLLAKEVENYFKTSEDKYGFLIRGHGLYTWGRSME 184 Query: 206 KAKTMCECYDYLFD 219 +A E +++F+ Sbjct: 185 EALIHTEALEFIFE 198 >1E4A-P nrPDB Length = 214 Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 8/92 (8%) Query: 28 IPELCKQFYHLGWVTGTGGGISLKHGDEIYIAPSGVQKERIQPEDMFVCDINEKDISGPS 87 I + C + LG GTG +S+++ D + I P+G+ E++ + D N K G Sbjct: 10 IIDTCLEMTRLGLNQGTGN-VSVRYQDGMLITPTGIPYEKLTESHIVFIDGNGKHEEGKL 68 Query: 88 PSKKLKKSQCTPLFMNAYTMR-GAGAVIHTHS 118 PS + + M AY R A AV+H H+ Sbjct: 69 PSSEWR------FHMAAYQSRPDANAVVHNHA 94 >4C25-A nrPDB Length = 212 Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 52/206 (25%), Positives = 77/206 (37%), Gaps = 27/206 (13%) Query: 33 KQFYHLGWVTGTGGGISL--KHGDEIYIAPSGVQKERIQPEDMFVCDINEKDISGPSPSK 90 K+ GTGG +S+ + + I PSG+ I+ D+ V DIN + G + Sbjct: 18 KKLVETDLTKGTGGNLSVFDREKQLMAITPSGIDFFEIKESDIVVMDINGNVVEG----E 73 Query: 91 KLKKSQCTPLFMNAYTMRGAGAVIHTHSK-AAVMATLLFPGREFKITHQEMIKGIKKCTS 149 +L S+ + T A+IH H+ A V+A L P +H + K Sbjct: 74 RLPSSEWYMHLIQYQTRDDIDAIIHAHTTYATVLACLREP---LPASHYMIAVAGKDVRV 130 Query: 150 GGYYRYDDMLVVPIIENTPEEKDLKDRMAHAMNEYPDSCAVLVRRHGVYVWGETWEKAKT 209 Y Y K+L A AM AVL+ HG+ + A Sbjct: 131 AEYATYGT-------------KELAVNAAKAME---GRRAVLLANHGILAGAQNLLNAFN 174 Query: 210 MCECYDYLFDIAVSMKKVGLDPSQLP 235 + E +Y I K G +P LP Sbjct: 175 IVEEVEYCAKIYCLAKNFG-EPVVLP 199 >1K0W-A nrPDB Length = 231 Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust. Identities = 48/180 (26%), Positives = 65/180 (36%), Gaps = 31/180 (17%) Query: 41 VTGTGGGISL--KHGDEIYIAPSGVQKERIQPEDMFVCDINEKDISGPSPSKKLKKSQCT 98 VT T G +S + I PSGV + +DM V I +G K S T Sbjct: 22 VTLTWGNVSAVDRERGVFVIKPSGVDYSIMTADDMVVVSIE----TGEVVEGAKKPSSDT 77 Query: 99 PLFMNAY-TMRGAGAVIHTHSKAAVM---ATLLFPGREFKITHQEMIKGIKKCTS----- 149 P Y G ++HTHS+ A + A P TH G CT Sbjct: 78 PTHRLLYQAFPSIGGIVHTHSRHATIWAQAGQSIPAT--GTTHANYFYGTIPCTRKMTDA 135 Query: 150 --GGYYRYDDMLVVPIIENTPEEKDLKDRMAHAMNEYPDSCAVLVRRHGVYVWGETWEKA 207 G Y ++ V I+E ++ +M VLV HG + WG+ E A Sbjct: 136 EINGEYEWETGNV--IVETFEKQGIDAAQMP----------GVLVHSHGPFAWGKNAEDA 183 >5FOZ-B nrPDB Length = 448 Score = 31.6 bits (70), Expect = 0.32, Method: Compositional matrix adjust. Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 9/55 (16%) Query: 4 CDAREGDCCSRRCGAQDKEHP--------RYLIPELCKQFYHL-GWVTGTGGGIS 49 CD+++ S +CG + +P Y +PE+ K+FY+L + G G+S Sbjct: 2 CDSKDNSGVSEKCGKKFTNYPLNTTPTSLNYNLPEISKKFYNLKNKYSRNGYGLS 56 >4XMN-B nrPDB Length = 652 Score = 30.4 bits (67), Expect = 0.64, Method: Compositional matrix adjust. Identities = 19/95 (20%), Positives = 40/95 (42%), Gaps = 7/95 (7%) Query: 100 LFMNAYTMRGAGAVIHTHSKAAVMATLLFPGREFKITHQ-EMIKGIKKCTSGGYYRYDDM 158 L M T+ A H ++ + + L+F + K ++ + ++ G Y +M Sbjct: 451 LVMREITLLRASTNDHILNRLKIPSQLIFNAQALKDRYEGNYLSEVQNLLLGSSYDLAEM 510 Query: 159 LVVP------IIENTPEEKDLKDRMAHAMNEYPDS 187 +V ++ N P + + + +NE+PDS Sbjct: 511 AIVTSLGPRLLLSNNPVQNNELKTLREILNEFPDS 545 >2W40-A nrPDB Length = 503 Score = 30.4 bits (67), Expect = 0.65, Method: Compositional matrix adjust. Identities = 21/94 (22%), Positives = 39/94 (41%), Gaps = 5/94 (5%) Query: 109 GAGAVIHTHSKAAVMATLLFPGREFKITHQEMIKGIKKCTSGGYYRYDDMLVVPIIENTP 168 G+ VI + ++ + F E I H + +KC G+Y +D + ++ + N Sbjct: 1 GSMNVILSIDQSTQSTKVFFYDEELNIVHSNNLNHEQKCLKPGWYEHDPIEIMTNLYNLM 60 Query: 169 EE--KDLKDRMAHAMNEYPDSCAVLVRRHGVYVW 200 E K LKD+ + + +R V +W Sbjct: 61 NEGIKVLKDKYTSVI---IKCIGITNQRETVIIW 91 >5MUL-A nrPDB Length = 431 Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust. Identities = 14/42 (33%), Positives = 20/42 (47%) Query: 195 HGVYVWGETWEKAKTMCECYDYLFDIAVSMKKVGLDPSQLPV 236 H +VW ETW+ CY FD V+ K + +LP+ Sbjct: 209 HLSWVWRETWQVETNHDLCYARSFDNGVTWYKSDGEQYKLPI 250 >1F37-A nrPDB Length = 110 Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust. Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 2/66 (3%) Query: 34 QFYHLGWVTGTGGGISLKHGDEIYIAPSGVQKERIQPEDMFVCDINEKDISGPSPSKKLK 93 Q + +T TG + G + + P GV +++PED V +I EK + G P ++L Sbjct: 43 QLFMTTVITPTGCMNACMMGPVVVVYPDGVWYGQVKPED--VDEIVEKHLKGGEPVERLV 100 Query: 94 KSQCTP 99 S+ P Sbjct: 101 ISKGKP 106 >4AXH-A nrPDB Length = 668 Score = 27.3 bits (59), Expect = 5.5, Method: Compositional matrix adjust. Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 14/80 (17%) Query: 162 PIIEN--TPEEKDLKDRMAHA------MNEYPDSCAVLVRRHGVYVWGETWEKAKTMC-- 211 P + N TP +++D A A + +Y D VL+++H VWG +K +T Sbjct: 314 PAMHNLLTPRGAEVRDAKAWAGYIDASLEKYGDRTDVLIQQHNWPVWGG--DKVRTYLAD 371 Query: 212 --ECYDYLFDIAVSMKKVGL 229 + Y +L + A+++ GL Sbjct: 372 QRDMYAFLNNRALNLMNKGL 391 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4M6R-A nrPDB 353 5e-98 2IRP-A nrPDB 236 4e-63 4C25-A nrPDB 224 3e-59 1E4A-P nrPDB 151 4e-37 Sequences not found previously or not previously below threshold: 1K0W-A nrPDB 66 2e-11 2OPI-A nrPDB 54 8e-08 4XXF-A nrPDB 52 3e-07 2Z7B-A nrPDB 42 2e-04 1F37-A nrPDB 34 0.063 3DM5-A nrPDB 33 0.11 4AOY-A nrPDB 31 0.72 5YJF-A nrPDB 29 1.8 4QGM-A nrPDB 29 2.3 3D1P-A nrPDB 28 2.9 5M2E-A nrPDB 28 3.3 2NV9-A nrPDB 28 3.4 3I4X-A nrPDB 28 3.5 2OLG-A nrPDB 27 5.9 >4M6R-A nrPDB Length = 224 Score = 353 bits (905), Expect = 5e-98, Method: Composition-based stats. Identities = 223/223 (100%), Positives = 223/223 (100%) Query: 20 DKEHPRYLIPELCKQFYHLGWVTGTGGGISLKHGDEIYIAPSGVQKERIQPEDMFVCDIN 79 DKEHPRYLIPELCKQFYHLGWVTGTGGGISLKHGDEIYIAPSGVQKERIQPEDMFVCDIN Sbjct: 2 DKEHPRYLIPELCKQFYHLGWVTGTGGGISLKHGDEIYIAPSGVQKERIQPEDMFVCDIN 61 Query: 80 EKDISGPSPSKKLKKSQCTPLFMNAYTMRGAGAVIHTHSKAAVMATLLFPGREFKITHQE 139 EKDISGPSPSKKLKKSQCTPLFMNAYTMRGAGAVIHTHSKAAVMATLLFPGREFKITHQE Sbjct: 62 EKDISGPSPSKKLKKSQCTPLFMNAYTMRGAGAVIHTHSKAAVMATLLFPGREFKITHQE 121 Query: 140 MIKGIKKCTSGGYYRYDDMLVVPIIENTPEEKDLKDRMAHAMNEYPDSCAVLVRRHGVYV 199 MIKGIKKCTSGGYYRYDDMLVVPIIENTPEEKDLKDRMAHAMNEYPDSCAVLVRRHGVYV Sbjct: 122 MIKGIKKCTSGGYYRYDDMLVVPIIENTPEEKDLKDRMAHAMNEYPDSCAVLVRRHGVYV 181 Query: 200 WGETWEKAKTMCECYDYLFDIAVSMKKVGLDPSQLPVGENGIV 242 WGETWEKAKTMCECYDYLFDIAVSMKKVGLDPSQLPVGENGIV Sbjct: 182 WGETWEKAKTMCECYDYLFDIAVSMKKVGLDPSQLPVGENGIV 224 >2IRP-A nrPDB Length = 208 Score = 236 bits (603), Expect = 4e-63, Method: Composition-based stats. Identities = 51/194 (26%), Positives = 86/194 (44%), Gaps = 13/194 (6%) Query: 28 IPELCKQFYHLGWVTGTGGGISLKHGDE-IYIAPSGVQKERIQPEDMFVCDINEKDISGP 86 I E + + GWV T G IS K +E I I SG K ++ PED+ + D + + G Sbjct: 16 IIEAGRILHSRGWVPATSGNISAKVSEEYIAITASGKHKGKLTPEDILLIDYEGRPVGGG 75 Query: 87 SPSKKLKKSQCTPLFMNAYTMR-GAGAVIHTHSKAAVMATLLFPGREFKITHQEMIKGIK 145 PS + T L Y + AV+HTHS A + +++ ++ E++K Sbjct: 76 KPSAE------TLLHTTVYKLFPEVNAVVHTHSPNATVISIVEKKDFVELEDYELLKAFP 129 Query: 146 KCTSGGYYRYDDMLVVPIIENTPEEKDLKDRMAHAMNEYPDSCAVLVRRHGVYVWGETWE 205 + ++ + +PI N L + + D L+R HG+Y WG + E Sbjct: 130 DI-----HTHEVKIKIPIFPNEQNIPLLAKEVENYFKTSEDKYGFLIRGHGLYTWGRSME 184 Query: 206 KAKTMCECYDYLFD 219 +A E +++F+ Sbjct: 185 EALIHTEALEFIFE 198 >4C25-A nrPDB Length = 212 Score = 224 bits (570), Expect = 3e-59, Method: Composition-based stats. Identities = 52/211 (24%), Positives = 79/211 (37%), Gaps = 27/211 (12%) Query: 28 IPELCKQFYHLGWVTGTGGGISL--KHGDEIYIAPSGVQKERIQPEDMFVCDINEKDISG 85 + + K+ GTGG +S+ + + I PSG+ I+ D+ V DIN + G Sbjct: 13 LIKYGKKLVETDLTKGTGGNLSVFDREKQLMAITPSGIDFFEIKESDIVVMDINGNVVEG 72 Query: 86 PSPSKKLKKSQCTPLFMNAYTMRGAGAVIHTHSK-AAVMATLLFPGREFKITHQEMIKGI 144 ++L S+ + T A+IH H+ A V+A L P +H + Sbjct: 73 ----ERLPSSEWYMHLIQYQTRDDIDAIIHAHTTYATVLACLREP---LPASHYMIAVAG 125 Query: 145 KKCTSGGYYRYDDMLVVPIIENTPEEKDLKDRMAHAMNEYPDSCAVLVRRHGVYVWGETW 204 K Y Y K+L A AM AVL+ HG+ + Sbjct: 126 KDVRVAEYATYGT-------------KELAVNAAKAME---GRRAVLLANHGILAGAQNL 169 Query: 205 EKAKTMCECYDYLFDIAVSMKKVGLDPSQLP 235 A + E +Y I K G +P LP Sbjct: 170 LNAFNIVEEVEYCAKIYCLAKNFG-EPVVLP 199 >1E4A-P nrPDB Length = 214 Score = 151 bits (380), Expect = 4e-37, Method: Composition-based stats. Identities = 45/207 (21%), Positives = 80/207 (38%), Gaps = 28/207 (13%) Query: 28 IPELCKQFYHLGWVTGTGGGISLKHGDEIYIAPSGVQKERIQPEDMFVCDINEKDISGPS 87 I + C + LG GT G +S+++ D + I P+G+ E++ + D N K G Sbjct: 10 IIDTCLEMTRLGLNQGT-GNVSVRYQDGMLITPTGIPYEKLTESHIVFIDGNGKHEEGKL 68 Query: 88 PSKKLKKSQCTPLFMNAYTMR-GAGAVIHTHSKAAVMATLLFPGREFKITHQEMIKGIKK 146 PS + + M AY R A AV+H H+ ++L R H + Sbjct: 69 PSSEWR------FHMAAYQSRPDANAVVHNHAVHCTAVSIL--NRSIPAIHYMIAAAGGN 120 Query: 147 -CTSGGYYRYDDMLVVPIIENTPEEKDLKDRMAHAMNEYPDSCAVLVRRHGVYVWGETWE 205 Y + ++L + +A A+ + A L++ HG+ E Sbjct: 121 SIPCAPYATFGT-------------RELSEHVALALK---NRKATLLQHHGLIACEVNLE 164 Query: 206 KAKTMCECYDYLFDIAVSMKKVGLDPS 232 KA + + L + ++ + DP Sbjct: 165 KALWLAHEVEVLAQLYLTTLAI-TDPV 190 >1K0W-A nrPDB Length = 231 Score = 65.6 bits (158), Expect = 2e-11, Method: Composition-based stats. Identities = 41/204 (20%), Positives = 67/204 (32%), Gaps = 30/204 (14%) Query: 28 IPELCKQFYHLGWVTGTGGGISL--KHGDEIYIAPSGVQKERIQPEDMFVCDIN-EKDIS 84 + E VT T G +S + I PSGV + +DM V I + + Sbjct: 9 VLEANLALPKHNLVTLTWGNVSAVDRERGVFVIKPSGVDYSIMTADDMVVVSIETGEVVE 68 Query: 85 GPSPSKKLKKSQCTPLFMNAYTMRGAGAVIHTHSKAAVMATLLFPGREFKITHQEMIKGI 144 G K S + G ++HTHS+ A + G+ T Sbjct: 69 G----AKKPSSDTPTHRLLYQAFPSIGGIVHTHSRHATIWA--QAGQSIPATG------- 115 Query: 145 KKCTSGGYYRYDDMLVVPIIENTPEEKDLKDRMAHAMNEYPDSC--------AVLVRRHG 196 T+ Y Y + + + + + + + E + VLV HG Sbjct: 116 ---TTHANYFYGTIPCTRKMTDAEINGEYEWETGNVIVETFEKQGIDAAQMPGVLVHSHG 172 Query: 197 VYVWGETWEKAK---TMCECYDYL 217 + WG+ E A + E Y+ Sbjct: 173 PFAWGKNAEDAVHNAIVLEEVAYM 196 >2OPI-A nrPDB Length = 212 Score = 53.6 bits (127), Expect = 8e-08, Method: Composition-based stats. Identities = 38/193 (19%), Positives = 71/193 (36%), Gaps = 26/193 (13%) Query: 44 TGGGISLKHGDEIYIAPSGVQKERIQPEDMFVCDI-NEKDISGPSPSKKLKKSQCTPLFM 102 + G +S + G+E I+ +G + E + +C+I + +G PS + T Sbjct: 26 SSGNLSWRIGEEALISGTGSWVPTLAKEKVSICNIASGTPTNGVKPSME-----STFHLG 80 Query: 103 NAYTMRGAGAVIHTHSK-AAVMATLLFPGREFKITHQEMIKGIKKCTSGGYYRYDDMLVV 161 V+H S+ A ++ + F +T + + YYR Sbjct: 81 VLRERPDVNVVLHFQSEYATAISCMKNKPTNFNVTAEIPCHVGSEIPVIPYYR------- 133 Query: 162 PIIENTPEEKDLKDRMAHAMNEYPDSCAVLVRRHGVYVWGETWEKAKTMCECYDYLFDIA 221 P +L + AM ++ +VL+ HG V G+ +++ ++ I Sbjct: 134 ------PGSPELAKAVVEAMLKHN---SVLLTNHGQVVCGKDFDQVYERATFFEMACRII 184 Query: 222 VSMKKVGLDPSQL 234 V G D S L Sbjct: 185 VQS---GGDYSVL 194 >4XXF-A nrPDB Length = 258 Score = 51.7 bits (122), Expect = 3e-07, Method: Composition-based stats. Identities = 32/215 (14%), Positives = 76/215 (35%), Gaps = 23/215 (10%) Query: 28 IPELCKQFYHLGWVTGTGGGISLKHGDE---IYIAPSGVQKERIQPEDMFVCDINEKDIS 84 + + F + G+ G ++++ + ++ P G+ + D+ + + I Sbjct: 26 LVAAIRIFANEGFDHTVAGHLTVRDPENKHHFWVNPFGLAFRLMTVSDLILVNQEGTVIG 85 Query: 85 GPSPSKKLKKSQCTPLFMNAYTMR-GAGAVIHTHSKAAVMATLLFPGREFKITHQEMIKG 143 G +++ + + R A+ H+HS + L G+ IT Q+ Sbjct: 86 GGKEGRRIVNLAGFMIHSAIHKARPEVQAICHSHSTYGKAFSSL--GKPLAITTQD---- 139 Query: 144 IKKCTSGGYYRYDDMLVVPIIENTPEEKDLKDRMAHAMNEYPDSCAVLVRRHGVYVWGET 203 Y D+ ++ E+ +A A+ + A++++ HG+ G T Sbjct: 140 -------SCAFYGDVALLGDFGGVVIEEKESGTIAVALQQ---KKAIILQNHGLLTVGTT 189 Query: 204 WEKAKTMCECYDYLFDIAVSMKKVGLDPSQLPVGE 238 + A + + + G +P+ E Sbjct: 190 IDSAVAWFIMLEKQCQVQLLADAAGQ---TIPIDE 221 >2Z7B-A nrPDB Length = 270 Score = 42.1 bits (97), Expect = 2e-04, Method: Composition-based stats. Identities = 31/180 (17%), Positives = 62/180 (34%), Gaps = 15/180 (8%) Query: 28 IPELCKQFYHLGWVTGTGGGISLKHGDEIYIAPSGVQKERIQPEDMFVCDINEKDISGPS 87 + K + G + T G IS + ++ S +++ P + V DI ++ G + Sbjct: 45 LVTATKILLNEGIMD-TFGHISARDPED---PASFFLAQKLAPSLITVDDIQRFNLDGET 100 Query: 88 PSKKLKKSQCTPLFMNAYTMRGAGAVIHTHSKAAVMATLLF-PGREFKITHQEMIKGIKK 146 + + T V+HTHS A + + P R + + + Sbjct: 101 SDNRPSYLERYIHSEIYKTRPDVQCVLHTHSPAVLPYCFVDTPLRPVTHMGAFIGESVPV 160 Query: 147 CTSGGYYRYDDMLVVPIIENTPEEKDLKDRMAHAMNEYPDSCAVLVRRHGVYVWGETWEK 206 + + L D+ +A ++ VL+ RHGV G++ + Sbjct: 161 YEIRDKHGDETDLF-------GGSPDVCADIAESLGS---QTVVLMARHGVVNVGKSVRE 210 >1F37-A nrPDB Length = 110 Score = 34.0 bits (76), Expect = 0.063, Method: Composition-based stats. Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 4/92 (4%) Query: 8 EGDCCSRRCGAQDKEHPRYLIPELCKQFYHLGWVTGTGGGISLKHGDEIYIAPSGVQKER 67 +G C R G+++ + Q + +T TG + G + + P GV + Sbjct: 19 QGSCAQR--GSREVFQAFMEKIQTDPQLFMTTVITPTGCMNACMMGPVVVVYPDGVWYGQ 76 Query: 68 IQPEDMFVCDINEKDISGPSPSKKLKKSQCTP 99 ++PED V +I EK + G P ++L S+ P Sbjct: 77 VKPED--VDEIVEKHLKGGEPVERLVISKGKP 106 >3DM5-A nrPDB Length = 443 Score = 33.2 bits (74), Expect = 0.11, Method: Composition-based stats. Identities = 8/50 (16%), Positives = 20/50 (40%) Query: 51 KHGDEIYIAPSGVQKERIQPEDMFVCDINEKDISGPSPSKKLKKSQCTPL 100 + D I +A GV + + D+ + D + + +++K+ Sbjct: 163 QEKDAIKLAKEGVDYFKSKGVDIIIVDTAGRHKEDKALIEEMKQISNVIH 212 >4AOY-A nrPDB Length = 402 Score = 30.5 bits (67), Expect = 0.72, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 47/131 (35%), Gaps = 3/131 (2%) Query: 103 NAYTMRGAGAVIHTHSKAAVMATLLFPGREFKIT-HQEMIKGIKKCTSGGY-YRYDDMLV 160 + G G ++ H+ + + + + +Q++ K S Y +R+ D + Sbjct: 167 TIHEFDGPGVIMGMHNTDKSIRSFARACFNYALDMNQDLWFSTKDTISKTYDHRFKD-IF 225 Query: 161 VPIIENTPEEKDLKDRMAHAMNEYPDSCAVLVRRHGVYVWGETWEKAKTMCECYDYLFDI 220 I EN +EK + + D+ A ++R G VW M + F Sbjct: 226 QEIYENEYKEKFEAKNLQYFYTLIDDAVARIIRSEGGMVWACKNYDGDVMSDMVASAFGS 285 Query: 221 AVSMKKVGLDP 231 M V + P Sbjct: 286 LAMMTSVLVSP 296 >5YJF-A nrPDB Length = 284 Score = 29.0 bits (63), Expect = 1.8, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 32/88 (36%), Gaps = 4/88 (4%) Query: 26 YLIPELCKQFYHLGWVTGTGGGISLKHGDEIYIAPSGVQKERIQPEDMFVCDINEKDISG 85 Y + C+ F + + + AP+ P +VCD+ + G Sbjct: 89 YQLLSACESFKEIVVTDYSDQNLQELEKWLKA-APAAFDW---SPVVTYVCDLEGNRVKG 144 Query: 86 PSPSKKLKKSQCTPLFMNAYTMRGAGAV 113 P +KL+++ L + + GAV Sbjct: 145 PEKEEKLRQAVKQVLKCDVTQSQPLGAV 172 >4QGM-A nrPDB Length = 174 Score = 28.6 bits (62), Expect = 2.3, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 36/111 (32%), Gaps = 25/111 (22%) Query: 90 KKLKKSQCTPLFMNAYTMRGAGAVIHTHSKAAVMATLLFPGREFKITHQEMIKGIKKCTS 149 +K S+ P Y++ KA ++A K I ++ Sbjct: 35 EKWNISKLPPHLNENYSLTDEN-------KAEILAVF--------------SKEIADVSA 73 Query: 150 G-GYYRYDDMLVVPIIENTPEEKDLKDRMAHAMNEYPDSCAVLVRRHGVYV 199 GY +D + + +TP +L + D +V HG++ Sbjct: 74 RRGYKAHDV---ISLSNSTPNLDELLINFQKEHHHTDDEVRFIVSGHGIFA 121 >3D1P-A nrPDB Length = 139 Score = 28.2 bits (61), Expect = 2.9, Method: Composition-based stats. Identities = 6/73 (8%), Positives = 22/73 (30%), Gaps = 4/73 (5%) Query: 102 MNAYTMRGAGAVIHTHSKAAVMATLLFPGRE----FKITHQEMIKGIKKCTSGGYYRYDD 157 + +Y+ ++ H V+ + P + + + ++ Sbjct: 22 IQSYSFEDMKRIVGKHDPNVVLVDVREPSEYSIVHIPASINVPYRSHPDAFALDPLEFEK 81 Query: 158 MLVVPIIENTPEE 170 + +P ++ E Sbjct: 82 QIGIPKPDSAKEL 94 >5M2E-A nrPDB Length = 418 Score = 28.2 bits (61), Expect = 3.3, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 7/42 (16%) Query: 17 GAQDKEHPRYLIPELCKQFYHLGWV-------TGTGGGISLK 51 QDK +P LI H+GW GT G I+ K Sbjct: 348 AGQDKVNPGSLILSAEMMLRHMGWTEAADLIIKGTNGAIAAK 389 >2NV9-A nrPDB Length = 372 Score = 28.2 bits (61), Expect = 3.4, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 26/83 (31%), Gaps = 10/83 (12%) Query: 102 MNAYTMRGAGAVIHTHSKAAVMATLLFPGREFKITHQEMI---KGIKKCTSGGY------ 152 ++ Y I + + PGR F H ++ K+ G Y Sbjct: 226 LSTYMSDYINDAIKDFFPEDTVTIVAEPGRFF-AEHYSVLATQVIGKRVRDGLYEYFFNE 284 Query: 153 YRYDDMLVVPIIENTPEEKDLKD 175 Y V ++ P + L+D Sbjct: 285 STYGGFSNVIFEKSVPTPQLLRD 307 >3I4X-A nrPDB Length = 465 Score = 28.2 bits (61), Expect = 3.5, Method: Composition-based stats. Identities = 10/74 (13%), Positives = 21/74 (28%) Query: 84 SGPSPSKKLKKSQCTPLFMNAYTMRGAGAVIHTHSKAAVMATLLFPGREFKITHQEMIKG 143 G + ++ + A+ + HS A + A +L + + Sbjct: 4 GGSMKAANASSAEAYRVLSRAFRFDNEDQKLWWHSTAPMFAKMLETANYTTPCQYQYLIT 63 Query: 144 IKKCTSGGYYRYDD 157 K+C Y Sbjct: 64 YKECVIPSLGCYPT 77 >2OLG-A nrPDB Length = 278 Score = 27.4 bits (59), Expect = 5.9, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 29/88 (32%), Gaps = 15/88 (17%) Query: 124 ATLLFPGREFKITHQEMIKGIKKCTSGGYYRYDDMLVVPIIENTPEEKDLKDRMAHAMNE 183 L P E ++ + + G + +G Y L VP++ K Sbjct: 152 VCLPQPNEEVQVGQRLTVVGWGRTETGQYSTIKQKLAVPVVHAEQCAKTF---------- 201 Query: 184 YPDSCAVLVRRHGVYVWGETWEKAKTMC 211 + V VR + G EKAK C Sbjct: 202 --GAAGVRVRSSQLCAGG---EKAKDSC 224 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.313 0.124 0.319 Lambda K H 0.267 0.0381 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9,116,812 Number of Sequences: 36641 Number of extensions: 345261 Number of successful extensions: 934 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 20 Number of HSP's successfully gapped in prelim test: 13 Number of HSP's that attempted gapping in prelim test: 895 Number of HSP's gapped (non-prelim): 33 length of query: 242 length of database: 10,336,785 effective HSP length: 94 effective length of query: 148 effective length of database: 6,892,531 effective search space: 1020094588 effective search space used: 1020094588 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 57 (26.7 bits)