BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q96GD0 (296 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 2P27-A nrPDB 584 e-167 4BX2-A nrPDB 537 e-153 4BKM-A nrPDB 427 e-120 3PDW-A nrPDB 117 4e-27 1PW5-A nrPDB 106 1e-23 2C4N-A nrPDB 97 7e-21 4I9G-A nrPDB 96 2e-20 2HO4-A nrPDB 76 1e-14 2X4D-A nrPDB 74 8e-14 3HLT-A nrPDB 72 3e-13 4KNV-A nrPDB 42 4e-04 2GFH-A nrPDB 40 0.001 4PNH-A nrPDB 39 0.003 2O2X-A nrPDB 33 0.14 3KC2-A nrPDB 33 0.14 2HSZ-A nrPDB 30 1.7 2E7Z-A nrPDB 30 1.8 3ZWF-A nrPDB 28 3.6 3L1U-A nrPDB 28 4.9 3L8F-A nrPDB 28 5.2 3L8H-A nrPDB 28 6.9 >2P27-A nrPDB Length = 306 Score = 584 bits (1506), Expect = e-167, Method: Compositional matrix adjust. Identities = 295/296 (99%), Positives = 296/296 (100%) Query: 1 MARCERLRGAALRDVLGRAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNN 60 +ARCERLRGAALRDVLGRAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNN Sbjct: 3 LARCERLRGAALRDVLGRAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNN 62 Query: 61 SRRARPELALRFARLGFGGLRAEQLFSSALCAARLLRQRLPGPPDAPGAVFVLGGEGLRA 120 SRRARPELALRFARLGFGGLRAEQLFSSALCAARLLRQRLPGPPDAPGAVFVLGGEGLRA Sbjct: 63 SRRARPELALRFARLGFGGLRAEQLFSSALCAARLLRQRLPGPPDAPGAVFVLGGEGLRA 122 Query: 121 ELRAAGLRLAGDPSAGDGAAPRVRAVLVGYDEHFSFAKLREACAHLRDPECLLVATDRDP 180 ELRAAGLRLAGDPSAGDGAAPRVRAVLVGYDEHFSFAKLREACAHLRDPECLLVATDRDP Sbjct: 123 ELRAAGLRLAGDPSAGDGAAPRVRAVLVGYDEHFSFAKLREACAHLRDPECLLVATDRDP 182 Query: 181 WHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFECITENFSIDPARTLMVGDRL 240 WHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFECITENFSIDPARTLMVGDRL Sbjct: 183 WHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFECITENFSIDPARTLMVGDRL 242 Query: 241 ETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADLTEGLED 296 ETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADLTEGLED Sbjct: 243 ETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADLTEGLED 298 >4BX2-A nrPDB Length = 293 Score = 537 bits (1383), Expect = e-153, Method: Compositional matrix adjust. Identities = 271/296 (91%), Positives = 279/296 (94%), Gaps = 4/296 (1%) Query: 1 MARCERLRGAALRDVLGRAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNN 60 MARCERLRGAALRDVLG+AQGVLFDCDGVLWNGER VPGAPELL+RLARAGK LFVSNN Sbjct: 2 MARCERLRGAALRDVLGQAQGVLFDCDGVLWNGERIVPGAPELLQRLARAGKNTLFVSNN 61 Query: 61 SRRARPELALRFARLGFGGLRAEQLFSSALCAARLLRQRLPGPPDAPGAVFVLGGEGLRA 120 SRRARPELALRFARLGF GLRAEQLFSSALCAARLLRQRLPGPPDA GAVFVLGGEGLRA Sbjct: 62 SRRARPELALRFARLGFAGLRAEQLFSSALCAARLLRQRLPGPPDASGAVFVLGGEGLRA 121 Query: 121 ELRAAGLRLAGDPSAGDGAAPRVRAVLVGYDEHFSFAKLREACAHLRDPECLLVATDRDP 180 ELRAAGLRLAGDP G PRVRAVLVGYDE FSF++L EACAHLRDP+CLLVATDRDP Sbjct: 122 ELRAAGLRLAGDP----GEDPRVRAVLVGYDEQFSFSRLTEACAHLRDPDCLLVATDRDP 177 Query: 181 WHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFECITENFSIDPARTLMVGDRL 240 WHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMF+CITE+FS+DPARTLMVGDRL Sbjct: 178 WHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFQCITEDFSVDPARTLMVGDRL 237 Query: 241 ETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADLTEGLED 296 ETDILFGHRCGMTTVLTLTGVS LEEAQAYL AGQ DLVPHYYVESIADL EGLED Sbjct: 238 ETDILFGHRCGMTTVLTLTGVSSLEEAQAYLTAGQRDLVPHYYVESIADLMEGLED 293 >4BKM-A nrPDB Length = 309 Score = 427 bits (1099), Expect = e-120, Method: Compositional matrix adjust. Identities = 227/307 (73%), Positives = 247/307 (80%), Gaps = 13/307 (4%) Query: 1 MARCERLRGAALRDVLGRAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNN 60 MARCERLRGAALRDVLG+AQGVLFDCDGVLWNGER VPGAPELL+RLARAGK LFVSNN Sbjct: 5 MARCERLRGAALRDVLGQAQGVLFDCDGVLWNGERIVPGAPELLQRLARAGKNTLFVSNN 64 Query: 61 SRRARPELALRFARLGFGGLRAEQLFSSALCAARLLRQRLPGPPDAPGAVFVLGGEGLRA 120 SRRARPELALRFARLGF GLRAEQLFSSALCAARLLRQRL G PD P A +VLG L A Sbjct: 65 SRRARPELALRFARLGFAGLRAEQLFSSALCAARLLRQRLAGVPD-PKA-YVLGSPALAA 122 Query: 121 ELRAAGLRLAG---DPSAGDGAA--------PRVRAVLVGYDEHFSFAKLREACAHLRDP 169 EL A G+ G D GDG + P VRAV+VG+D HFS+ KL +A +L+ P Sbjct: 123 ELEAVGVTSVGVGPDVLHGDGPSDWLAVPLEPDVRAVVVGFDPHFSYMKLTKAVRYLQQP 182 Query: 170 ECLLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFECITENFSID 229 +CLLV T+ D PL +G GTG L AVE A+ RQA ++GKPSPYMF+CITE+FS+D Sbjct: 183 DCLLVGTNMDNRLPLENGRFIAGTGCLVRAVEMAAQRQADIIGKPSPYMFQCITEDFSVD 242 Query: 230 PARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIAD 289 PARTLMVGDRLETDILFGHRCGMTTVLTLTGVS LEEAQAYL AGQ DLVPHYYVESIAD Sbjct: 243 PARTLMVGDRLETDILFGHRCGMTTVLTLTGVSSLEEAQAYLTAGQRDLVPHYYVESIAD 302 Query: 290 LTEGLED 296 L EGLED Sbjct: 303 LMEGLED 309 >3PDW-A nrPDB Length = 266 Score = 117 bits (294), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 77/250 (30%), Positives = 121/250 (48%), Gaps = 17/250 (6%) Query: 16 LGRAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARL 75 L +G L D DG ++NG + A E + L G LFV+NNS R ++A + Sbjct: 3 LKTYKGYLIDLDGTMYNGTEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSF 62 Query: 76 GFGGLRAEQLFSSALCAARLLRQRLPGPPDAPGAVFVLGGEGLRAELRAAGLRLAGDPSA 135 EQ+F++++ A+ + Q+ DA +V+V+G EG+R + GL G+ + Sbjct: 63 DIPATE-EQVFTTSMATAQHIAQQ---KKDA--SVYVIGEEGIRQAIEENGLTFGGENA- 115 Query: 136 GDGAAPRVRAVLVGYDEHFSFAKLREACAHLRDPECLLVATDRDPWHPLSDGSRTPGTGS 195 V+VG D ++ K C +R+ ++T+ D P G PG GS Sbjct: 116 --------DFVVVGIDRSITYEKFAVGCLAIRNG-ARFISTNGDIAIPTERG-LLPGNGS 165 Query: 196 LAAAVETASGRQALVVGKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTV 255 L + + ++G Q + +GKP + E D + TLMVGD TDI+ G GM T+ Sbjct: 166 LTSVLTVSTGVQPVFIGKPESIIMEQAMRVLGTDVSETLMVGDNYATDIMAGINAGMDTL 225 Query: 256 LTLTGVSRLE 265 L TGV++ E Sbjct: 226 LVHTGVTKRE 235 >1PW5-A nrPDB Length = 253 Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 72/255 (28%), Positives = 123/255 (48%), Gaps = 18/255 (7%) Query: 15 VLGRAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFAR 74 +L + + + D DG + + +PG+ E LE L K +F +NNS + + Sbjct: 1 MLDKIELFILDMDGTFYLDDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRN 60 Query: 75 LGFGGLRAEQLFSSALCAARLLRQRLPGPPDAPGAVFVLGGEGLRAELRAAGLRLAGDPS 134 +G + S + A +L++ +F+LG L+ A G Sbjct: 61 MGVDVPDDAVVTSGEITAEHMLKRF------GRCRIFLLGTPQLKKVFEAYG-------H 107 Query: 135 AGDGAAPRVRAVLVGYDEHFSFAKLREACAHLRDPECLLVATDRDPWHPLSDGSRTPGTG 194 D P V++G+D+ ++ +L++AC LR + +AT D P +G P G Sbjct: 108 VIDEENPDF--VVLGFDKTLTYERLKKACILLRKGK-FYIATHPDINCPSKEGP-VPDAG 163 Query: 195 SLAAAVETASGRQA-LVVGKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMT 253 S+ AA+E ++GR+ L+ GKP+P + + I+E F + R MVGDRL TD+ G G+ Sbjct: 164 SIMAAIEASTGRKPDLIAGKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIV 223 Query: 254 TVLTLTGVSRLEEAQ 268 ++L LTG + E+ + Sbjct: 224 SILVLTGETTPEDLE 238 >2C4N-A nrPDB Length = 250 Score = 97.4 bits (241), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 75/252 (29%), Positives = 118/252 (46%), Gaps = 25/252 (9%) Query: 20 QGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFGG 79 + V+ D DGVL + AVPGA E L + G + ++N + +LA RFA G Sbjct: 4 KNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVD- 62 Query: 80 LRAEQLFSSALCAARLLRQRLPGPPDAPGAVFVLGGEGLRAELRAAGLRLAG-DPSAGDG 138 + ++SA+ A LR++ +V+G L EL AG + +P Sbjct: 63 VPDSVFYTSAMATADFLRRQ------EGKKAYVVGEGALIHELYKAGFTITDVNPDF--- 113 Query: 139 AAPRVRAVLVGYDEHFSFAKLREACAHLRDPECLLVATDRDPWHPLSDG-SRTPGTGSLA 197 V+VG +++ + +A A+ +AT+ D + G P G+L Sbjct: 114 -------VIVGETRSYNWDMMHKA-AYFVANGARFIATNPD-----THGRGFYPACGALC 160 Query: 198 AAVETASGRQALVVGKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLT 257 A +E SGR+ VGKPSP++ T++VGD L TDIL G + G+ T+L Sbjct: 161 AGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILV 220 Query: 258 LTGVSRLEEAQA 269 L+GVS L++ + Sbjct: 221 LSGVSSLDDIDS 232 >4I9G-A nrPDB Length = 361 Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 87/248 (35%), Positives = 124/248 (50%), Gaps = 22/248 (8%) Query: 22 VLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFGGLR 81 +L D DG ++ G + GA ++ L++ LFV+NN+ R+ E+A LGF Sbjct: 19 LLIDLDGTVFCGRQPTGGA---VQSLSQVRSRKLFVTNNASRSADEVAAHLCELGFTAT- 74 Query: 82 AEQLFSSALCAARLLRQRLPGPPDAPGA-VFVLGGEGLRAELRAAGLRLAGDPSAGDGAA 140 E + +SA AA LL +L APGA V ++G E L E+ A GLR Sbjct: 75 GEDVVTSAQSAAHLLAGQL-----APGARVLIVGTEALANEVAAVGLRPVRRFE------ 123 Query: 141 PRVRAVLVGYDEHFSFAKLREACAHLRDPECLLVATDRDPWHPLSDGSRTPGTGSLAAAV 200 R AV+ G ++ L EA +R L VA + DP P G PG GS+ AA+ Sbjct: 124 DRPDAVVQGLSMTTGWSDLAEAALAIR-AGALWVAANVDPTLPTERG-LLPGNGSMVAAL 181 Query: 201 ETASGRQALVVGKPSP-YMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLTLT 259 TA+G V GKP+P M E + D L+VGDRL+TDI + G+ +++ LT Sbjct: 182 RTATGMDPRVAGKPAPALMTEAVARG---DFRAALVVGDRLDTDIEGANAAGLPSLMVLT 238 Query: 260 GVSRLEEA 267 GV+ +A Sbjct: 239 GVNSAWDA 246 >2HO4-A nrPDB Length = 259 Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 74/266 (27%), Positives = 116/266 (43%), Gaps = 32/266 (12%) Query: 20 QGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFGG 79 + VL D +G L + AVPGA E L+RL FV+N ++ + +L R +L F Sbjct: 8 KAVLVDLNGTLHIEDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFE- 66 Query: 80 LRAEQLFSSALCAARLLRQRLPGPPDAPGAVFVLGGEGLRAELRAAGLRLAGDPSAGDGA 139 + +++F+S A L+ Q+ P + +L RA G++ DP+A Sbjct: 67 ISEDEIFTSLTAARNLIEQKQVRP------MLLLDD---RALPEFTGVQ-TQDPNA---- 112 Query: 140 APRVRAVLVGY-DEHFSFAKLREACAHLRDPECLLVATDRDPWHPLSDGSRTPGTGSLAA 198 V++G EHF + L +A L D L+A + ++ DG G G Sbjct: 113 ------VVIGLAPEHFHYQLLNQAFRLLLDG-APLIAIHKARYYKRKDGLAL-GPGPFVT 164 Query: 199 AVETASGRQALVVGKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLTL 258 A+E A+ +A+VVGKP F + P +M+GD D+ GM +L Sbjct: 165 ALEYATDTKAMVVGKPEKTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILVK 224 Query: 259 TGVSRLEEAQAYLAAGQHDLVPHYYV 284 TG Y AA + + P Y+ Sbjct: 225 TG--------KYKAADEEKINPPPYL 242 >2X4D-A nrPDB Length = 271 Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 67/253 (26%), Positives = 114/253 (45%), Gaps = 26/253 (10%) Query: 16 LGRAQGVLFDCDGVLWNGERAVPG----APELLERLARAGKAALFVSNNSRRARPELALR 71 L +GVL D GVL++ + E + RL R+ F +N S +R EL + Sbjct: 9 LAGVRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQ 68 Query: 72 FARLGFGGLRAEQLFSSALCAARLLRQRLPGPPDAPGAVFVLGGEGLRAELRAAGLRLAG 131 RLGF + +++ + A A ++L++R P ++L +G+R+E Sbjct: 69 LQRLGFD-ISEQEVTAPAPAACQILKERGLRP-------YLLIHDGVRSEFDQI------ 114 Query: 132 DPSAGDGAAPRVRAVLVGYDEHFSFAKLREACAHLRDPEC-LLVATDRDPWHPLSDGSRT 190 D + P V+ E FS+ + A L + E +L++ + ++ + G Sbjct: 115 -----DTSNPNC-VVIADAGESFSYQNMNNAFQVLMELEKPVLISLGKGRYYAATSGLML 168 Query: 191 PGTGSLAAAVETASGRQALVVGKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRC 250 G A+E A G +A VVGKPSP F+ + ++ + +M+GD + D+ RC Sbjct: 169 D-VGPYMKALEYACGIKAEVVGKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRC 227 Query: 251 GMTTVLTLTGVSR 263 GM + TG R Sbjct: 228 GMRALQVRTGKFR 240 >3HLT-A nrPDB Length = 266 Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 72/244 (29%), Positives = 108/244 (44%), Gaps = 22/244 (9%) Query: 20 QGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFGG 79 + VL D G L + AVPGA E L+RL A FV+N ++ ++ +L R +L F Sbjct: 8 KAVLVDLSGTLHIEDAAVPGAQEALKRLRGASVIIRFVTNTTKESKQDLLERLRKLEFD- 66 Query: 80 LRAEQLFSSALCAARLLRQRLPGPPDAPGAVFVLGGEGLRAELRAAGLRLAGDPSAGDGA 139 + +++F+S L AAR L +R P +L + RA G++ + + G Sbjct: 67 ISEDEIFTS-LTAARSLLERKQVRP------MLLVDD--RALPDFKGIQTSDPNAVVMGL 117 Query: 140 APRVRAVLVGYDEHFSFAKLREACAHLRDPECLLVATDRDPWHPLSDGSRTPGTGSLAAA 199 AP EHF + L +A L D L+A + ++ DG G G A Sbjct: 118 AP----------EHFHYQILNQAFRLLLDG-APLIAIHKARYYKRKDGLAL-GPGPFVTA 165 Query: 200 VETASGRQALVVGKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLTLT 259 +E A+ +A VVGKP F +P +M+GD D+ GM +L T Sbjct: 166 LEYATDTKATVVGKPEKTFFLEALRGTGCEPEEAVMIGDDCRDDVGGAQDVGMLGILVKT 225 Query: 260 GVSR 263 G R Sbjct: 226 GKYR 229 >4KNV-A nrPDB Length = 241 Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 35/115 (30%), Positives = 50/115 (43%), Gaps = 19/115 (16%) Query: 184 LSDGSRTPGTGSLAAAVETASGRQALVVG------KPSPYMFECITENFSIDPARTLMVG 237 L++G R + A S A+VVG KP+P +F + P +MVG Sbjct: 125 LTNGDRQTQREKIEACA-CQSYFDAVVVGGEQREEKPAPSIFYYCCNLLGVQPGDCVMVG 183 Query: 238 DRLETDILFGHRCGM--TTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADL 290 D LETDI G G+ T + G+ L+ + VPHY V S+ +L Sbjct: 184 DTLETDIQGGLNAGLKATVWINKNGIVPLKSSP----------VPHYMVSSVLEL 228 >2GFH-A nrPDB Length = 260 Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 15/113 (13%) Query: 184 LSDGSRTPGTGSLAAAVETASGRQALVVG------KPSPYMFECITENFSIDPARTLMVG 237 L++G R + A S A+V+G KP+P +F + + P +MVG Sbjct: 142 LTNGDRQTQREKIEACA-CQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCVMVG 200 Query: 238 DRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADL 290 D LETDI G G+ + + R+ + + PHY V S+ +L Sbjct: 201 DTLETDIQGGLNAGLKATVWINKSGRVPLTSSPM--------PHYMVSSVLEL 245 >4PNH-A nrPDB Length = 199 Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust. Identities = 27/62 (43%), Positives = 32/62 (51%), Gaps = 6/62 (9%) Query: 213 KPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLA 272 KP P M + I E F IDPA T +VGD L D+ G G L LTG + + LA Sbjct: 119 KPMPGMMKLIAERFEIDPADTPVVGDSLR-DLQAGAALGFRPHLVLTG-----KGKKTLA 172 Query: 273 AG 274 AG Sbjct: 173 AG 174 >2O2X-A nrPDB Length = 218 Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust. Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 15/80 (18%) Query: 213 KPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLA 272 KP+P M + ++D R+L+VGD+L D+ G R G+ AQ +L Sbjct: 137 KPNPGMLVEAGKRLALDLQRSLIVGDKL-ADMQAGKRAGL--------------AQGWLV 181 Query: 273 AGQHDLVPHYYVESIADLTE 292 G+ + P + + + D +E Sbjct: 182 DGEAAVQPGFAIRPLRDSSE 201 >3KC2-A nrPDB Length = 352 Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 3/48 (6%) Query: 24 FDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNN---SRRARPEL 68 FD DGVL+ G++ + GA + L+ L R + ++N S RAR E Sbjct: 18 FDIDGVLFRGKKPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEF 65 >2HSZ-A nrPDB Length = 243 Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust. Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 1/51 (1%) Query: 205 GRQALVVGKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTV 255 G Q+L KP P F + F + P + L VGD + DI H G V Sbjct: 162 GGQSLPEIKPHPAPFYYLCGKFGLYPKQILFVGDS-QNDIFAAHSAGCAVV 211 >2E7Z-A nrPDB Length = 727 Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 8/82 (9%) Query: 66 PELALRFARLGFGGLRAEQLFSSALCAARLLRQRLPGP-----PDAPGAVFVLGGEGLRA 120 PELA + + F GLR + F S +LR P P P ++ + GE + Sbjct: 588 PELAKEYPLILFAGLREDSNFQSCYHQPGILRDAEPDPVALLHPKTAQSLGLPSGEWIWV 647 Query: 121 ELRAAGLRLAGDPSAGDGAAPR 142 E L+L DGA P Sbjct: 648 ETTHGRLKLL---LKHDGAQPE 666 >3ZWF-A nrPDB Length = 368 Score = 28.5 bits (62), Expect = 3.6, Method: Compositional matrix adjust. Identities = 17/63 (26%), Positives = 31/63 (49%) Query: 13 RDVLGRAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRF 72 + ++GR +L DC GV+ +G + +LL A A + + + P++A F Sbjct: 239 KPIVGRKICILGDCSGVVGDGGVKLCFEADLLIHEATLDDAQMDKAKEHGHSTPQMAATF 298 Query: 73 ARL 75 A+L Sbjct: 299 AKL 301 >3L1U-A nrPDB Length = 211 Score = 28.1 bits (61), Expect = 4.9, Method: Compositional matrix adjust. Identities = 15/36 (41%), Positives = 18/36 (50%) Query: 206 RQALVVGKPSPYMFECITENFSIDPARTLMVGDRLE 241 RQ KP P M + ID A + MVGD+LE Sbjct: 124 RQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLE 159 >3L8F-A nrPDB Length = 187 Score = 28.1 bits (61), Expect = 5.2, Method: Compositional matrix adjust. Identities = 15/36 (41%), Positives = 18/36 (50%) Query: 206 RQALVVGKPSPYMFECITENFSIDPARTLMVGDRLE 241 RQ KP P M + ID A + MVGD+LE Sbjct: 104 RQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLE 139 >3L8H-A nrPDB Length = 179 Score = 27.7 bits (60), Expect = 6.9, Method: Compositional matrix adjust. Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 1/62 (1%) Query: 213 KPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLA 272 KP P M+ I + +D A VGD L D+ + G L TG R AQ L Sbjct: 101 KPLPGMYRDIARRYDVDLAGVPAVGDSLR-DLQAAAQAGCAPWLVQTGNGRKTLAQGGLP 159 Query: 273 AG 274 G Sbjct: 160 EG 161 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 2P27-A nrPDB 414 e-116 4BX2-A nrPDB 400 e-112 4BKM-A nrPDB 371 e-103 3PDW-A nrPDB 250 7e-67 1PW5-A nrPDB 248 2e-66 3HLT-A nrPDB 242 1e-64 2C4N-A nrPDB 241 3e-64 2HO4-A nrPDB 240 7e-64 2X4D-A nrPDB 216 9e-57 4I9G-A nrPDB 199 1e-51 2GFH-A nrPDB 115 2e-26 4KNV-A nrPDB 111 3e-25 Sequences not found previously or not previously below threshold: 3KC2-A nrPDB 46 1e-05 2YY6-A nrPDB 46 2e-05 4PNH-A nrPDB 44 5e-05 2HI0-A nrPDB 42 3e-04 3QUB-A nrPDB 41 5e-04 1CR6-A nrPDB 40 0.002 3L8H-A nrPDB 39 0.002 3L8F-A nrPDB 38 0.004 3L1U-A nrPDB 38 0.005 1RQL-A nrPDB 37 0.009 2HSZ-A nrPDB 37 0.014 5OLW-A nrPDB 36 0.017 4Y2Y-A nrPDB 36 0.024 2O2X-A nrPDB 36 0.026 4G9B-A nrPDB 35 0.041 3KBB-A nrPDB 35 0.049 3ZWK-A nrPDB 34 0.063 2P9J-A nrPDB 34 0.075 4DW8-A nrPDB 33 0.14 6HOZ-A nrPDB 33 0.15 3OCV-A nrPDB 32 0.21 4RN3-A nrPDB 32 0.22 6BWI-A nrPDB 32 0.23 3IRU-A nrPDB 31 0.74 2HDO-A nrPDB 30 1.5 1GPJ-A nrPDB 30 1.7 3PCT-A nrPDB 29 1.9 1TE2-A nrPDB 28 3.8 3D8N-A nrPDB 28 4.0 5HHZ-A nrPDB 28 5.2 6DQX-A nrPDB 27 6.7 3ASJ-A nrPDB 27 6.8 3IVR-A nrPDB 27 7.6 >2P27-A nrPDB Length = 306 Score = 414 bits (1063), Expect = e-116, Method: Composition-based stats. Identities = 295/296 (99%), Positives = 296/296 (100%) Query: 1 MARCERLRGAALRDVLGRAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNN 60 +ARCERLRGAALRDVLGRAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNN Sbjct: 3 LARCERLRGAALRDVLGRAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNN 62 Query: 61 SRRARPELALRFARLGFGGLRAEQLFSSALCAARLLRQRLPGPPDAPGAVFVLGGEGLRA 120 SRRARPELALRFARLGFGGLRAEQLFSSALCAARLLRQRLPGPPDAPGAVFVLGGEGLRA Sbjct: 63 SRRARPELALRFARLGFGGLRAEQLFSSALCAARLLRQRLPGPPDAPGAVFVLGGEGLRA 122 Query: 121 ELRAAGLRLAGDPSAGDGAAPRVRAVLVGYDEHFSFAKLREACAHLRDPECLLVATDRDP 180 ELRAAGLRLAGDPSAGDGAAPRVRAVLVGYDEHFSFAKLREACAHLRDPECLLVATDRDP Sbjct: 123 ELRAAGLRLAGDPSAGDGAAPRVRAVLVGYDEHFSFAKLREACAHLRDPECLLVATDRDP 182 Query: 181 WHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFECITENFSIDPARTLMVGDRL 240 WHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFECITENFSIDPARTLMVGDRL Sbjct: 183 WHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFECITENFSIDPARTLMVGDRL 242 Query: 241 ETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADLTEGLED 296 ETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADLTEGLED Sbjct: 243 ETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADLTEGLED 298 >4BX2-A nrPDB Length = 293 Score = 400 bits (1028), Expect = e-112, Method: Composition-based stats. Identities = 271/296 (91%), Positives = 279/296 (94%), Gaps = 4/296 (1%) Query: 1 MARCERLRGAALRDVLGRAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNN 60 MARCERLRGAALRDVLG+AQGVLFDCDGVLWNGER VPGAPELL+RLARAGK LFVSNN Sbjct: 2 MARCERLRGAALRDVLGQAQGVLFDCDGVLWNGERIVPGAPELLQRLARAGKNTLFVSNN 61 Query: 61 SRRARPELALRFARLGFGGLRAEQLFSSALCAARLLRQRLPGPPDAPGAVFVLGGEGLRA 120 SRRARPELALRFARLGF GLRAEQLFSSALCAARLLRQRLPGPPDA GAVFVLGGEGLRA Sbjct: 62 SRRARPELALRFARLGFAGLRAEQLFSSALCAARLLRQRLPGPPDASGAVFVLGGEGLRA 121 Query: 121 ELRAAGLRLAGDPSAGDGAAPRVRAVLVGYDEHFSFAKLREACAHLRDPECLLVATDRDP 180 ELRAAGLRLAGDP G PRVRAVLVGYDE FSF++L EACAHLRDP+CLLVATDRDP Sbjct: 122 ELRAAGLRLAGDP----GEDPRVRAVLVGYDEQFSFSRLTEACAHLRDPDCLLVATDRDP 177 Query: 181 WHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFECITENFSIDPARTLMVGDRL 240 WHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMF+CITE+FS+DPARTLMVGDRL Sbjct: 178 WHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFQCITEDFSVDPARTLMVGDRL 237 Query: 241 ETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADLTEGLED 296 ETDILFGHRCGMTTVLTLTGVS LEEAQAYL AGQ DLVPHYYVESIADL EGLED Sbjct: 238 ETDILFGHRCGMTTVLTLTGVSSLEEAQAYLTAGQRDLVPHYYVESIADLMEGLED 293 >4BKM-A nrPDB Length = 309 Score = 371 bits (953), Expect = e-103, Method: Composition-based stats. Identities = 225/307 (73%), Positives = 245/307 (79%), Gaps = 13/307 (4%) Query: 1 MARCERLRGAALRDVLGRAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNN 60 MARCERLRGAALRDVLG+AQGVLFDCDGVLWNGER VPGAPELL+RLARAGK LFVSNN Sbjct: 5 MARCERLRGAALRDVLGQAQGVLFDCDGVLWNGERIVPGAPELLQRLARAGKNTLFVSNN 64 Query: 61 SRRARPELALRFARLGFGGLRAEQLFSSALCAARLLRQRLPGPPDAPGAVFVLGGEGLRA 120 SRRARPELALRFARLGF GLRAEQLFSSALCAARLLRQRL G PD +VLG L A Sbjct: 65 SRRARPELALRFARLGFAGLRAEQLFSSALCAARLLRQRLAGVPDP--KAYVLGSPALAA 122 Query: 121 ELRAAGLRLAG---DPSAGDGAA--------PRVRAVLVGYDEHFSFAKLREACAHLRDP 169 EL A G+ G D GDG + P VRAV+VG+D HFS+ KL +A +L+ P Sbjct: 123 ELEAVGVTSVGVGPDVLHGDGPSDWLAVPLEPDVRAVVVGFDPHFSYMKLTKAVRYLQQP 182 Query: 170 ECLLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFECITENFSID 229 +CLLV T+ D PL +G GTG L AVE A+ RQA ++GKPSPYMF+CITE+FS+D Sbjct: 183 DCLLVGTNMDNRLPLENGRFIAGTGCLVRAVEMAAQRQADIIGKPSPYMFQCITEDFSVD 242 Query: 230 PARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIAD 289 PARTLMVGDRLETDILFGHRCGMTTVLTLTGVS LEEAQAYL AGQ DLVPHYYVESIAD Sbjct: 243 PARTLMVGDRLETDILFGHRCGMTTVLTLTGVSSLEEAQAYLTAGQRDLVPHYYVESIAD 302 Query: 290 LTEGLED 296 L EGLED Sbjct: 303 LMEGLED 309 >3PDW-A nrPDB Length = 266 Score = 250 bits (637), Expect = 7e-67, Method: Composition-based stats. Identities = 78/280 (27%), Positives = 130/280 (46%), Gaps = 23/280 (8%) Query: 16 LGRAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARL 75 L +G L D DG ++NG + A E + L G LFV+NNS R ++A + Sbjct: 3 LKTYKGYLIDLDGTMYNGTEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSF 62 Query: 76 GFGGLRAEQLFSSALCAARLLRQRLPGPPDAPGAVFVLGGEGLRAELRAAGLRLAGDPSA 135 EQ+F++++ A+ + Q+ +V+V+G EG+R + GL G+ + Sbjct: 63 DIPAT-EEQVFTTSMATAQHIAQQK-----KDASVYVIGEEGIRQAIEENGLTFGGENA- 115 Query: 136 GDGAAPRVRAVLVGYDEHFSFAKLREACAHLRDPECLLVATDRDPWHPLSDGSRTPGTGS 195 V+VG D ++ K C +R+ ++T+ D P G PG GS Sbjct: 116 --------DFVVVGIDRSITYEKFAVGCLAIRNG-ARFISTNGDIAIPTERG-LLPGNGS 165 Query: 196 LAAAVETASGRQALVVGKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTV 255 L + + ++G Q + +GKP + E D + TLMVGD TDI+ G GM T+ Sbjct: 166 LTSVLTVSTGVQPVFIGKPESIIMEQAMRVLGTDVSETLMVGDNYATDIMAGINAGMDTL 225 Query: 256 LTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADLTEGLE 295 L TGV++ E ++ P + ++S+ + +E Sbjct: 226 LVHTGVTKRE----HMTDDMEK--PTHAIDSLTEWIPYIE 259 >1PW5-A nrPDB Length = 253 Score = 248 bits (634), Expect = 2e-66, Method: Composition-based stats. Identities = 72/255 (28%), Positives = 123/255 (48%), Gaps = 18/255 (7%) Query: 15 VLGRAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFAR 74 +L + + + D DG + + +PG+ E LE L K +F +NNS + + Sbjct: 1 MLDKIELFILDMDGTFYLDDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRN 60 Query: 75 LGFGGLRAEQLFSSALCAARLLRQRLPGPPDAPGAVFVLGGEGLRAELRAAGLRLAGDPS 134 +G + S + A +L++ +F+LG L+ A G Sbjct: 61 MGVDVPDDAVVTSGEITAEHMLKRF------GRCRIFLLGTPQLKKVFEAYG-------H 107 Query: 135 AGDGAAPRVRAVLVGYDEHFSFAKLREACAHLRDPECLLVATDRDPWHPLSDGSRTPGTG 194 D P V++G+D+ ++ +L++AC LR + +AT D P +G P G Sbjct: 108 VIDEENP--DFVVLGFDKTLTYERLKKACILLRKGK-FYIATHPDINCPSKEGP-VPDAG 163 Query: 195 SLAAAVETASGRQA-LVVGKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMT 253 S+ AA+E ++GR+ L+ GKP+P + + I+E F + R MVGDRL TD+ G G+ Sbjct: 164 SIMAAIEASTGRKPDLIAGKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIV 223 Query: 254 TVLTLTGVSRLEEAQ 268 ++L LTG + E+ + Sbjct: 224 SILVLTGETTPEDLE 238 >3HLT-A nrPDB Length = 266 Score = 242 bits (617), Expect = 1e-64, Method: Composition-based stats. Identities = 72/266 (27%), Positives = 113/266 (42%), Gaps = 30/266 (11%) Query: 20 QGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFGG 79 + VL D G L + AVPGA E L+RL A FV+N ++ ++ +L R +L F Sbjct: 8 KAVLVDLSGTLHIEDAAVPGAQEALKRLRGASVIIRFVTNTTKESKQDLLERLRKLEFD- 66 Query: 80 LRAEQLFSSALCAARLLRQRLPGPPDAPGAVFVLGGEGLRAELRAAGLRLAGDPSAGDGA 139 + +++F+S A LL ++ P +L + RA G++ + + G Sbjct: 67 ISEDEIFTSLTAARSLLERKQVRP-------MLLVDD--RALPDFKGIQTSDPNAVVMGL 117 Query: 140 APRVRAVLVGYDEHFSFAKLREACAHLRDPECLLVATDRDPWHPLSDGSRTPGTGSLAAA 199 AP EHF + L +A L D L+A + ++ DG G G A Sbjct: 118 AP----------EHFHYQILNQAFRLLLDG-APLIAIHKARYYKRKDGLAL-GPGPFVTA 165 Query: 200 VETASGRQALVVGKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLTLT 259 +E A+ +A VVGKP F +P +M+GD D+ GM +L T Sbjct: 166 LEYATDTKATVVGKPEKTFFLEALRGTGCEPEEAVMIGDDCRDDVGGAQDVGMLGILVKT 225 Query: 260 GVSRLEEAQAYLAAGQHDLVPHYYVE 285 G Y A+ + + P Y+ Sbjct: 226 G--------KYRASDEEKINPPPYLT 243 >2C4N-A nrPDB Length = 250 Score = 241 bits (615), Expect = 3e-64, Method: Composition-based stats. Identities = 77/274 (28%), Positives = 123/274 (44%), Gaps = 29/274 (10%) Query: 18 RAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGF 77 + V+ D DGVL + AVPGA E L + G + ++N + +LA RFA G Sbjct: 2 TIKNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGV 61 Query: 78 GGLRAEQLFSSALCAARLLRQRLPGPPDAPGAVFVLGGEGLRAELRAAGLRLAGDPSAGD 137 + ++SA+ A LR++ +V+G L EL AG + Sbjct: 62 D-VPDSVFYTSAMATADFLRRQ------EGKKAYVVGEGALIHELYKAGFTITDVN---- 110 Query: 138 GAAPRVRAVLVGYDEHFSFAKLREACAHLRDPECLLVATDRDPWHPLSDG-SRTPGTGSL 196 V+VG +++ + +A A+ +AT+ D + G P G+L Sbjct: 111 -----PDFVIVGETRSYNWDMMHKA-AYFVANGARFIATNPD-----THGRGFYPACGAL 159 Query: 197 AAAVETASGRQALVVGKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVL 256 A +E SGR+ VGKPSP++ T++VGD L TDIL G + G+ T+L Sbjct: 160 CAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETIL 219 Query: 257 TLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADL 290 L+GVS L++ + P + S+A++ Sbjct: 220 VLSGVSSLDDIDS------MPFRPSWIYPSVAEI 247 >2HO4-A nrPDB Length = 259 Score = 240 bits (611), Expect = 7e-64, Method: Composition-based stats. Identities = 72/266 (27%), Positives = 112/266 (42%), Gaps = 30/266 (11%) Query: 20 QGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFGG 79 + VL D +G L + AVPGA E L+RL FV+N ++ + +L R +L F Sbjct: 8 KAVLVDLNGTLHIEDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFE- 66 Query: 80 LRAEQLFSSALCAARLLRQRLPGPPDAPGAVFVLGGEGLRAELRAAGLRLAGDPSAGDGA 139 + +++F+S A L+ Q+ P + +L RA G++ + G Sbjct: 67 ISEDEIFTSLTAARNLIEQKQVRP------MLLLDD---RALPEFTGVQTQDPNAVVIGL 117 Query: 140 APRVRAVLVGYDEHFSFAKLREACAHLRDPECLLVATDRDPWHPLSDGSRTPGTGSLAAA 199 AP EHF + L +A L D L+A + ++ DG G G A Sbjct: 118 AP----------EHFHYQLLNQAFRLLLDG-APLIAIHKARYYKRKDGLAL-GPGPFVTA 165 Query: 200 VETASGRQALVVGKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLTLT 259 +E A+ +A+VVGKP F + P +M+GD D+ GM +L T Sbjct: 166 LEYATDTKAMVVGKPEKTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILVKT 225 Query: 260 GVSRLEEAQAYLAAGQHDLVPHYYVE 285 G Y AA + + P Y+ Sbjct: 226 G--------KYKAADEEKINPPPYLT 243 >2X4D-A nrPDB Length = 271 Score = 216 bits (550), Expect = 9e-57, Method: Composition-based stats. Identities = 67/260 (25%), Positives = 114/260 (43%), Gaps = 26/260 (10%) Query: 16 LGRAQGVLFDCDGVLWNGERAVPG----APELLERLARAGKAALFVSNNSRRARPELALR 71 L +GVL D GVL++ + E + RL R+ F +N S +R EL + Sbjct: 9 LAGVRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQ 68 Query: 72 FARLGFGGLRAEQLFSSALCAARLLRQRLPGPPDAPGAVFVLGGEGLRAELRAAGLRLAG 131 RLGF + +++ + A A ++L++R P ++L +G+R+E Sbjct: 69 LQRLGFD-ISEQEVTAPAPAACQILKERGLRP-------YLLIHDGVRSEFDQI------ 114 Query: 132 DPSAGDGAAPRVRAVLVGYDEHFSFAKLREACAHLRDPECL-LVATDRDPWHPLSDGSRT 190 D + P V+ E FS+ + A L + E L++ + ++ + G Sbjct: 115 -----DTSNPNC-VVIADAGESFSYQNMNNAFQVLMELEKPVLISLGKGRYYAATSGLML 168 Query: 191 PGTGSLAAAVETASGRQALVVGKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRC 250 G A+E A G +A VVGKPSP F+ + ++ + +M+GD + D+ RC Sbjct: 169 -DVGPYMKALEYACGIKAEVVGKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRC 227 Query: 251 GMTTVLTLTGVSRLEEAQAY 270 GM + TG R + Sbjct: 228 GMRALQVRTGKFRPSDEHHP 247 >4I9G-A nrPDB Length = 361 Score = 199 bits (506), Expect = 1e-51, Method: Composition-based stats. Identities = 83/257 (32%), Positives = 123/257 (47%), Gaps = 20/257 (7%) Query: 12 LRDVLGRAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALR 71 ++ + +L D DG ++ G + GA ++ L++ LFV+NN+ R+ E+A Sbjct: 9 MKSIAQEHDCLLIDLDGTVFCGRQPTGGA---VQSLSQVRSRKLFVTNNASRSADEVAAH 65 Query: 72 FARLGFGGLRAEQLFSSALCAARLLRQRLPGPPDAPGAVFVLGGEGLRAELRAAGLRLAG 131 LGF E + +SA AA LL +L V ++G E L E+ A GLR Sbjct: 66 LCELGFTAT-GEDVVTSAQSAAHLLAGQLA----PGARVLIVGTEALANEVAAVGLRPVR 120 Query: 132 DPSAGDGAAPRVRAVLVGYDEHFSFAKLREACAHLRDPECLLVATDRDPWHPLSDGSRTP 191 R AV+ G ++ L EA +R L VA + DP P G P Sbjct: 121 RFE------DRPDAVVQGLSMTTGWSDLAEAALAIRAG-ALWVAANVDPTLPTERG-LLP 172 Query: 192 GTGSLAAAVETASGRQALVVGKPSP-YMFECITENFSIDPARTLMVGDRLETDILFGHRC 250 G GS+ AA+ TA+G V GKP+P M E + D L+VGDRL+TDI + Sbjct: 173 GNGSMVAALRTATGMDPRVAGKPAPALMTEAVARG---DFRAALVVGDRLDTDIEGANAA 229 Query: 251 GMTTVLTLTGVSRLEEA 267 G+ +++ LTGV+ +A Sbjct: 230 GLPSLMVLTGVNSAWDA 246 >2GFH-A nrPDB Length = 260 Score = 115 bits (288), Expect = 2e-26, Method: Composition-based stats. Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 15/113 (13%) Query: 184 LSDGSRTPGTGSLAAAVETASGRQALVVG------KPSPYMFECITENFSIDPARTLMVG 237 L++G R + A S A+V+G KP+P +F + + P +MVG Sbjct: 142 LTNGDRQTQREKIEACA-CQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCVMVG 200 Query: 238 DRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADL 290 D LETDI G G+ + + R+ + + PHY V S+ +L Sbjct: 201 DTLETDIQGGLNAGLKATVWINKSGRVPLTSSPM--------PHYMVSSVLEL 245 >4KNV-A nrPDB Length = 241 Score = 111 bits (278), Expect = 3e-25, Method: Composition-based stats. Identities = 32/113 (28%), Positives = 47/113 (41%), Gaps = 15/113 (13%) Query: 184 LSDGSRTPGTGSLAAAVETASGRQALVVG------KPSPYMFECITENFSIDPARTLMVG 237 L++G R + A S A+VVG KP+P +F + P +MVG Sbjct: 125 LTNGDRQTQREKIEACA-CQSYFDAVVVGGEQREEKPAPSIFYYCCNLLGVQPGDCVMVG 183 Query: 238 DRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADL 290 D LETDI G G+ + + + + VPHY V S+ +L Sbjct: 184 DTLETDIQGGLNAGLKATVWINKNGIVPLKSSP--------VPHYMVSSVLEL 228 >3KC2-A nrPDB Length = 352 Score = 46.3 bits (108), Expect = 1e-05, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 41/111 (36%), Gaps = 14/111 (12%) Query: 21 GVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNN---SRRARPELALRFARLGF 77 FD DGVL+ G++ + GA + L+ L R + ++N S RAR E ++L Sbjct: 15 AFAFDIDGVLFRGKKPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFIS--SKLDV 72 Query: 78 GGLRAEQLFSSALCAARLLRQRLPGPPDAPGAVFVLGGEGLRAELRAAGLR 128 + + S + + +G +R G + Sbjct: 73 DVSPLQIIQSHTP---------YKSLVNKYSRILAVGTPSVRGVAEGYGFQ 114 Score = 37.5 bits (85), Expect = 0.008, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 15/38 (39%) Query: 229 DPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEE 266 MVGD +DI+ G + L TGV + Sbjct: 289 PFHAVFMVGDNPASDIIGAQNYGWNSCLVKTGVYNEGD 326 >2YY6-A nrPDB Length = 213 Score = 46.3 bits (108), Expect = 2e-05, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 31/78 (39%), Gaps = 7/78 (8%) Query: 195 SLAAAVETASGRQALVVG------KPSPYMFECITENFSIDPARTLMVGDRLETDILFGH 248 + + + +V G KPSP E +P + L+VGD + DI G Sbjct: 113 KILDILNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEPEKALIVGDT-DADIEAGK 171 Query: 249 RCGMTTVLTLTGVSRLEE 266 R G T L L G +L Sbjct: 172 RAGTKTALALWGYVKLNS 189 >4PNH-A nrPDB Length = 199 Score = 44.4 bits (103), Expect = 5e-05, Method: Composition-based stats. Identities = 26/64 (40%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Query: 213 KPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLA 272 KP P M + I E F IDPA T +VGD L D+ G G L LTG + A L Sbjct: 119 KPMPGMMKLIAERFEIDPADTPVVGDSLR-DLQAGAALGFRPHLVLTGKGKKTLAAGGLP 177 Query: 273 AGQH 276 G Sbjct: 178 EGTR 181 Score = 31.7 bits (70), Expect = 0.44, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 10/56 (17%) Query: 20 QGVLFDCDGVLWNGE----------RAVPGAPELLERLARAGKAALFVSNNSRRAR 65 + V+ D DGV+ A+PG+ E + RL AG + +N S R Sbjct: 20 KLVVLDRDGVINVDSDAFVKSPDEWVALPGSLEAIARLNHAGYRVVVATNQSGIGR 75 >2HI0-A nrPDB Length = 240 Score = 42.1 bits (97), Expect = 3e-04, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 29/80 (36%), Gaps = 5/80 (6%) Query: 193 TGSLAAAVETASGRQALVVGKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGM 252 GS A+ SG + KP+P M + + + + +GD E DI M Sbjct: 149 PGSFDFALGEKSGIRR----KPAPDMTSECVKVLGVPRDKCVYIGDS-EIDIQTARNSEM 203 Query: 253 TTVLTLTGVSRLEEAQAYLA 272 + G + Q + A Sbjct: 204 DEIAVNWGFRSVPFLQKHGA 223 Score = 30.1 bits (66), Expect = 1.2, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 17/49 (34%) Query: 36 AVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFGGLRAEQ 84 PG +L++ L + G VSN A L F E+ Sbjct: 111 PFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPGSFDFALGEK 159 >3QUB-A nrPDB Length = 243 Score = 41.3 bits (95), Expect = 5e-04, Method: Composition-based stats. Identities = 47/273 (17%), Positives = 88/273 (32%), Gaps = 59/273 (21%) Query: 8 RGAALRDVLGRAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPE 67 RG+ +R + + VLFD DGVL+N +P E ++ + ++ +R E Sbjct: 16 RGSHMR---KKLKAVLFDMDGVLFNS---MPYHSEAWHQVMK--------THGLDLSREE 61 Query: 68 LALRFARLGFGGLRAEQLFSSALCAARLLRQRLPGPPDAPGAVFVLGGEGLRAELRAAGL 127 + R G ++ QR LG E + E+ + Sbjct: 62 AYMHAGRTG-------------ASTINIVFQRE------------LGKEATQEEIESIYH 96 Query: 128 RLAGDPSAGDGAAPRVRAVLVGYDEHFSFAKLREACAHLRDPECLLVATDRDPWHPLSDG 187 + ++ A A + L++ + +V T L Sbjct: 97 EKSILFNSYPEAERMPGA----------WELLQK---VKSEGLTPMVVTGSGQLSLLER- 142 Query: 188 SRTPGTGSLAAAVETASGRQALVVGKPSPYMFECITENFSIDPARTLMVGDRLETDILFG 247 G + + GKP+P + + + +++ + + G Sbjct: 143 LEHNFPGMFHKEL-MVTAFDVKY-GKPNPEPYLMALKKGGLKADEAVVI-ENAPLGVEAG 199 Query: 248 HRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVP 280 H+ G+ T+ TG + Q L AG L P Sbjct: 200 HKAGIFTIAVNTG---PLDGQVLLDAGADLLFP 229 >1CR6-A nrPDB Length = 554 Score = 39.8 bits (91), Expect = 0.002, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 79/252 (31%), Gaps = 50/252 (19%) Query: 24 FDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFGGLRAE 83 FD DGVL A+P R S + + L + F E Sbjct: 8 FDLDGVL-----ALPSIAGAFRR-----------SEEALALPRDFLLGAYQTEFPEGPTE 51 Query: 84 QLFSSALCAARLLRQRLPGPPDAPGAVFVLGGEGLRAELRAAGLRLAGDPSAGDGAAPRV 143 QL + ++ + L E R +A G L + S + + Sbjct: 52 QLMKGKITFSQWVP---------------LMDESYRKSSKACGANLPENFSISQIFSQAM 96 Query: 144 RAVLVGYDEHFSFAKLREACAHLRDPECLLVATDRDPWHPLSDGSRTPGTGSLAAAVETA 203 A + L+ A A + + T+ W L DG + + E + Sbjct: 97 AA------RSINRPMLQAAIALKKKGFTTCIVTN--NW--LDDGDKRDSLAQMMC--ELS 144 Query: 204 SGRQALV----VG--KPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLT 257 L+ VG KP P ++ + + P + + D +++ GM T+L Sbjct: 145 QHFDFLIESCQVGMIKPEPQIYNFLLDTLKAKPNEVVFL-DDFGSNLKPARDMGMVTILV 203 Query: 258 LTGVSRLEEAQA 269 S L E + Sbjct: 204 HNTASALRELEK 215 >3L8H-A nrPDB Length = 179 Score = 39.4 bits (90), Expect = 0.002, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 1/64 (1%) Query: 213 KPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLA 272 KP P M+ I + +D A VGD L D+ + G L TG R AQ L Sbjct: 101 KPLPGMYRDIARRYDVDLAGVPAVGDSLR-DLQAAAQAGCAPWLVQTGNGRKTLAQGGLP 159 Query: 273 AGQH 276 G Sbjct: 160 EGTR 163 Score = 27.8 bits (60), Expect = 5.1, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 10/56 (17%) Query: 20 QGVLFDCDGVLWNGERA----------VPGAPELLERLARAGKAALFVSNNSRRAR 65 + ++ D DGV+ A +PG+ + + RL +A + +N S AR Sbjct: 2 KLIILDRDGVVNQDSDAFVKSPDEWIALPGSLQAIARLTQADWTVVLATNQSGLAR 57 >3L8F-A nrPDB Length = 187 Score = 38.2 bits (87), Expect = 0.004, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 11/84 (13%) Query: 213 KPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGM-TTVLTLTGVSRLEEAQAYL 271 KP P M + ID A + MVGD+LE D+ + T VL TG EA+ Sbjct: 111 KPHPGMLLSARDYLHIDMAASYMVGDKLE-DMQAAVAANVGTKVLVRTGKPITPEAEN-- 167 Query: 272 AAGQHDLVPHYYVESIADLTEGLE 295 AA + + S+ADL + ++ Sbjct: 168 AAD-------WVLNSLADLPQAIK 184 >3L1U-A nrPDB Length = 211 Score = 37.9 bits (86), Expect = 0.005, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 11/84 (13%) Query: 213 KPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGM-TTVLTLTGVSRLEEAQAYL 271 KP P M + ID A + MVGD+LE D+ + T VL TG EA+ Sbjct: 131 KPHPGMLLSARDYLHIDMAASYMVGDKLE-DMQAAVAANVGTKVLVRTGKPITPEAEN-- 187 Query: 272 AAGQHDLVPHYYVESIADLTEGLE 295 AA + + S+ADL + ++ Sbjct: 188 AAD-------WVLNSLADLPQAIK 204 >1RQL-A nrPDB Length = 267 Score = 37.1 bits (84), Expect = 0.009, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 2/59 (3%) Query: 211 VGKPSPYMFECITENFSIDP-ARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQ 268 G+P P+M + P + VGD + +D+ G GM TV + G S L + Sbjct: 158 AGRPYPWMCYKNAMELGVYPMNHMIKVGDTV-SDMKEGRNAGMWTVGVILGSSELGLTE 215 >2HSZ-A nrPDB Length = 243 Score = 36.7 bits (83), Expect = 0.014, Method: Composition-based stats. Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 1/39 (2%) Query: 213 KPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCG 251 KP P F + F + P + L VGD + DI H G Sbjct: 170 KPHPAPFYYLCGKFGLYPKQILFVGDS-QNDIFAAHSAG 207 >5OLW-A nrPDB Length = 227 Score = 36.3 bits (82), Expect = 0.017, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 38/111 (34%), Gaps = 13/111 (11%) Query: 183 PLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFECITENFSIDPARTLMVGDRLET 242 +G +L + + + KP+P +F + P+ ++ + D Sbjct: 115 ASKNGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAG 174 Query: 243 DILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVP---HYYVESIADL 290 I G + GV R E+ +VP HY +E + ++ Sbjct: 175 -IQAIKDSGALPI----GVGRPEDL-----GDDIVIVPDTSHYTLEFLKEV 215 >4Y2Y-A nrPDB Length = 561 Score = 35.5 bits (80), Expect = 0.024, Method: Composition-based stats. Identities = 11/57 (19%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 213 KPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQA 269 KP P +++ + + P+ + + D + ++ GM T+L + L+E + Sbjct: 160 KPEPQIYKFLLDTLKASPSEVVFL-DDIGANLKPARDLGMVTILVQDTDTALKELEK 215 >2O2X-A nrPDB Length = 218 Score = 35.5 bits (80), Expect = 0.026, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 20/102 (19%) Query: 196 LAAAVETASGRQALVVG-----KPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRC 250 + A +G L + KP+P M + ++D R+L+VGD+L D+ G R Sbjct: 115 VLACAYHEAGVGPLAIPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLA-DMQAGKRA 173 Query: 251 GMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADLTE 292 G+ AQ +L G+ + P + + + D +E Sbjct: 174 GL--------------AQGWLVDGEAAVQPGFAIRPLRDSSE 201 >4G9B-A nrPDB Length = 243 Score = 34.8 bits (78), Expect = 0.041, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 19/50 (38%), Gaps = 1/50 (2%) Query: 213 KPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVS 262 KP P +F + P + + D I + GM +V G++ Sbjct: 149 KPDPEIFLAACAGLGVPPQACIGIEDAQAG-IDAINASGMRSVGIGAGLT 197 >3KBB-A nrPDB Length = 216 Score = 34.8 bits (78), Expect = 0.049, Method: Composition-based stats. Identities = 47/274 (17%), Positives = 81/274 (29%), Gaps = 66/274 (24%) Query: 20 QGVLFDCDGVLWNGERAVPGAPELLERLARA-GKAALFVSNNSRRARPELALRFARLGFG 78 + V+FD DGVL + E P E R+A + GK +L R +G Sbjct: 2 EAVIFDMDGVLMDTE---PLYFEAYRRVAESYGKPY----------TEDLHRRI--MGVP 46 Query: 79 GLRAEQLFSSALCAARLLRQRLPGPPDAPGAVF---VLGGEGLRAELRAAGLRLAGDPSA 135 + AL L + VF + G+R L + Sbjct: 47 EREGLPILMEALEIKDSLENFKKRVHEEKKRVFSELLKENPGVREALEFVKSKRI----- 101 Query: 136 GDGAAPRVRAVLVGYDEHFSFAKLREACAHLRDPECLLVATDRDPWHPLSDGSRTPGTGS 195 L +AT L R Sbjct: 102 -----------------------------------KLALATSTPQREALERLRRLD---- 122 Query: 196 LAAAVETASGRQALVVGKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTV 255 L + + GKP P ++ + E ++ P + ++ D ++ + G+ + Sbjct: 123 LEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPEKVVVFEDS-KSGVEAAKSAGIERI 181 Query: 256 LTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIAD 289 + V L + +A L AG LV + ++ Sbjct: 182 YGV--VHSLNDGKALLEAGAVALVKPEEILNVLK 213 >3ZWK-A nrPDB Length = 259 Score = 34.4 bits (77), Expect = 0.063, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 20/42 (47%) Query: 22 VLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRR 63 V D DG L + + A E LERL G + V+ +R+ Sbjct: 3 VFTDLDGTLLDERGELGPAREALERLRALGVPVVPVTAKTRK 44 >2P9J-A nrPDB Length = 162 Score = 34.0 bits (76), Expect = 0.075, Method: Composition-based stats. Identities = 22/134 (16%), Positives = 50/134 (37%), Gaps = 14/134 (10%) Query: 11 ALRDVLGRAQGVLFDCDGVLWNGERAVPGAPELLE--------RLARAGKAALFVSNNSR 62 ALRD + + + ++ D DGVL +G+ E ++ + K + ++ S Sbjct: 1 ALRDRVKKLKLLIMDIDGVLTDGKLYYTEHGETIKVFNVLDGIGIKLLQKMGITLAVISG 60 Query: 63 RARPELALRFARLGFGGLRAEQLFSSALCAARLLRQRLPGPPDAPGAVFVLGGEGL-RAE 121 R L R LG E++++ + + + + +G + + Sbjct: 61 RDSAPLITRLKELGV-----EEIYTGSYKKLEIYEKIKEKYSLKDEEIGFIGDDVVDIEV 115 Query: 122 LRAAGLRLAGDPSA 135 ++ G +A + Sbjct: 116 MKKVGFPVAVRNAV 129 >4DW8-A nrPDB Length = 279 Score = 33.2 bits (74), Expect = 0.14, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 24/63 (38%), Gaps = 1/63 (1%) Query: 18 RAQGVLFDCDGVLWNGERAVPG-APELLERLARAGKAALFVSNNSRRARPELALRFARLG 76 + + ++ D DG L N ++ + E L R+ G + S LA Sbjct: 4 KYKLIVLDLDGTLTNSKKEISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRMNE 63 Query: 77 FGG 79 FGG Sbjct: 64 FGG 66 >6HOZ-A nrPDB Length = 350 Score = 33.2 bits (74), Expect = 0.15, Method: Composition-based stats. Identities = 33/149 (22%), Positives = 51/149 (34%), Gaps = 22/149 (14%) Query: 16 LGRAQGVLF-----DCDGVLWNGERAV--PGAPELLERL-ARAGKAALFVSNNSRRARPE 67 L + +G L DC G + G AV P E + L LF ++++ R Sbjct: 6 LAQVRGALCGALLGDCMGAEFEGSDAVELPDVLEFVRLLEKEKKAGTLFYTDDTAMTRAV 65 Query: 68 LALRFARLGFGGLRAEQLFSSALCAARLLRQRLPGPPDAPGAVFV-----LGGEGLRAEL 122 + A+ F + A R + P GA V L Sbjct: 66 IQSLIAKPDFDEVD---------MAKRFAEEYKKEPTRGYGAGVVQVFKKLLSPKYSDVF 116 Query: 123 RAAGLRLAGDPSAGDGAAPRVRAVLVGYD 151 + A + G S G+G A RV ++ + Y Sbjct: 117 QPAREQFDGKGSYGNGGAMRVASIALAYP 145 >3OCV-A nrPDB Length = 262 Score = 32.5 bits (72), Expect = 0.21, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 28/93 (30%), Gaps = 5/93 (5%) Query: 27 DGVLWNG---ERAVPGAPELLERLARAGKAALFVSNNSRRARPE-LALRFARLGFGGLRA 82 D W RAVPGA E + +V+N RLGF G+ Sbjct: 90 DWTRWVDARQSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEE 149 Query: 83 EQLFSSALCAARLLRQRLPGPPDAPGAVFVLGG 115 + +A+ + V +G Sbjct: 150 SAFYLKKDKSAKA-ARFAEIEKQGYEIVLYVGD 181 >4RN3-A nrPDB Length = 213 Score = 32.5 bits (72), Expect = 0.22, Method: Composition-based stats. Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 1/41 (2%) Query: 213 KPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMT 253 KP P + E+F I P L VGD E D L G+ Sbjct: 149 KPHPEPLLKVLEHFGIGPREALFVGDS-EVDRLSAEAAGVP 188 >6BWI-A nrPDB Length = 977 Score = 32.5 bits (72), Expect = 0.23, Method: Composition-based stats. Identities = 28/91 (30%), Positives = 38/91 (41%), Gaps = 7/91 (7%) Query: 39 GAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFGGLRAEQLFSSALCAARLLRQ 98 GA LL +AR A R +LA +F +G L E SS + AARLL + Sbjct: 392 GACLLLRVMARLEPDA-----EEAARRKDLAFKFEGMGVD-LFGECYRSSEVRAARLLLR 445 Query: 99 RLPGPPDAPGAVFVLGGEGLRAELRAAGLRL 129 R P DA + + RA G++ Sbjct: 446 RCPLWGDATCLQLAMQADA-RAFFAQDGVQS 475 >3IRU-A nrPDB Length = 277 Score = 30.9 bits (68), Expect = 0.74, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 39/104 (37%), Gaps = 17/104 (16%) Query: 209 LVVGKPSPYM-FECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVS----- 262 +V G+P P M + E + V D L I G R GM TV + Sbjct: 164 VVRGRPFPDMALKVALELEVGHVNGCIKVDDTLPG-IEEGLRAGMWTVGVSCSGNEVGLD 222 Query: 263 -------RLEEAQAYLAAGQHDLV---PHYYVESIADLTEGLED 296 +E Q+Y + L HY ++S+ADL + D Sbjct: 223 REDWQALSSDEQQSYRQHAEQRLFNAGAHYVIDSVADLETVITD 266 >2HDO-A nrPDB Length = 209 Score = 29.8 bits (65), Expect = 1.5, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 23/66 (34%), Gaps = 1/66 (1%) Query: 213 KPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLA 272 KP P E ++ P L +GD + +D + L + G+ + Q Sbjct: 138 KPDPLPLLTALEKVNVAPQNALFIGDSV-SDEQTAQAANVDFGLAVWGMDPNADHQKVAH 196 Query: 273 AGQHDL 278 Q L Sbjct: 197 RFQKPL 202 >1GPJ-A nrPDB Length = 404 Score = 29.8 bits (65), Expect = 1.7, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 28/78 (35%), Gaps = 12/78 (15%) Query: 28 GVLWNGERAVPGAPEL----LERLARAGKAALFVSNNSRRARPELAL-------RFARLG 76 G L + V GA E+ + L G A+ V+N + ELA RF L Sbjct: 163 GSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDEL- 221 Query: 77 FGGLRAEQLFSSALCAAR 94 L + SA A Sbjct: 222 VDHLARSDVVVSATAAPH 239 >3PCT-A nrPDB Length = 260 Score = 29.4 bits (64), Expect = 1.9, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 1/52 (1%) Query: 35 RAVPGAPELLERLARAGKAALFVSNNSRR-ARPELALRFARLGFGGLRAEQL 85 A+PGA E + G FVSN + RLGF G+ + L Sbjct: 101 AAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDKTL 152 >1TE2-A nrPDB Length = 226 Score = 28.2 bits (61), Expect = 3.8, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 10/79 (12%) Query: 213 KPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLA 272 KP P ++ +DP + + D + I M +++ EAQ Sbjct: 150 KPHPQVYLDCAAKLGVDPLTCVALEDSVNGMI-ASKAARMRSIVV-----PAPEAQN--- 200 Query: 273 AGQHDLVPHYYVESIADLT 291 ++ + + S+ +LT Sbjct: 201 -DPRFVLANVKLSSLTELT 218 >3D8N-A nrPDB Length = 286 Score = 28.2 bits (61), Expect = 4.0, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 48/147 (32%), Gaps = 15/147 (10%) Query: 9 GAALRDVLGRAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPEL 68 G +RD+L + + D +G L R GA + L AG V + + ++ L Sbjct: 93 GVGVRDLLEAGKALGLDLEGPLAKAFRLARGA-KAARALKEAGLPPHAVGDGTSKSLLPL 151 Query: 69 ALRFARLGFGGLRAEQLF-SSALCAARLLRQRLPGP--------PDAPGAVFVLGGEGLR 119 + G+ A QL+ L +R P + L LR Sbjct: 152 LPQGR-----GVAALQLYGKPLPLLENALAERGYRVLPLMPYRHLPDPEGILRLEEAVLR 206 Query: 120 AELRAAGLRLAGDPSAGDGAAPRVRAV 146 E+ A A A +A+ Sbjct: 207 GEVDALAFVAAIQVEFLFEGAKDPKAL 233 >5HHZ-A nrPDB Length = 524 Score = 27.8 bits (60), Expect = 5.2, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 1/42 (2%) Query: 34 ERAVPGAPELLERLARAGKAAL-FVSNNSRRARPELALRFAR 74 A+PGAPE LE LAR + L F + A+ L AR Sbjct: 436 RSALPGAPESLEALARQNQRILDFCAGTGIGAKQYLPGHKAR 477 >6DQX-A nrPDB Length = 574 Score = 27.4 bits (59), Expect = 6.7, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 15/28 (53%) Query: 41 PELLERLARAGKAALFVSNNSRRARPEL 68 +LL+R G LF +N+ RP++ Sbjct: 234 AKLLQRKTETGIPYLFFKDNANAGRPDV 261 >3ASJ-A nrPDB Length = 334 Score = 27.4 bits (59), Expect = 6.8, Method: Composition-based stats. Identities = 50/302 (16%), Positives = 86/302 (28%), Gaps = 42/302 (13%) Query: 19 AQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFV-------------SNNSRRAR 65 + L + DG+ G +P A +LE G FV ++ Sbjct: 3 YRICLIEGDGI---GHEVIPAARRVLE---ATGLPLEFVEAEAGWETFERRGTSVPEETV 56 Query: 66 PELALRFARLGFGGLRAEQLFSSALCAARLLRQRLPGPPDAPGAVFVLGGEGLRAELRAA 125 ++ A L + A R LR+RL + A G R + Sbjct: 57 EKILSCHATLFGAATSPTRKVPGFFGAIRYLRRRLDLYANVRPAKSRPV-PGSRPGVDLV 115 Query: 126 GLRLAGDPSAGDGAAPRVRAVLVGYDEHF-SFAKLREACAHLRDPECL--LVATDRDPWH 182 +R + + + + + ++ A + + L + Sbjct: 116 IVRENTEGLYVEQERRYLDVAIADAVISKKASERIGRAALRIAEGRPRKTLHIAHKANVL 175 Query: 183 PLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFECITENFSIDPAR-TLMVGDRLE 241 PL+ G E A + V + + + P R ++V L Sbjct: 176 PLTQGLFLD------TVKEVAKDFPLVNV---QDIIVDNCAMQLVMRPERFDVIVTTNLL 226 Query: 242 TDILFGHRCGMTTVLTL---------TGVSRLEEAQAYLAAGQHDLVPHYYVESIADLTE 292 DIL G+ L L T V A AG+ P + S A + + Sbjct: 227 GDILSDLAAGLVGGLGLAPSGNIGDTTAVFEPVHGSAPDIAGKGIANPTAAILSAAMMLD 286 Query: 293 GL 294 L Sbjct: 287 YL 288 >3IVR-A nrPDB Length = 509 Score = 27.4 bits (59), Expect = 7.6, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 24/68 (35%), Gaps = 9/68 (13%) Query: 167 RDPECLLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFECITENF 226 R PE L+ T + +P ++A A+V+G P P E I Sbjct: 396 RAPEKELIKTGGENVYPAEVEGALKQHPAIA---------DAVVIGVPDPQWSEAIKAVC 446 Query: 227 SIDPARTL 234 P ++ Sbjct: 447 VCKPGESI 454 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.310 0.124 0.296 Lambda K H 0.267 0.0375 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9,171,322 Number of Sequences: 36641 Number of extensions: 328895 Number of successful extensions: 1082 Number of sequences better than 10.0: 50 Number of HSP's better than 10.0 without gapping: 50 Number of HSP's successfully gapped in prelim test: 24 Number of HSP's that attempted gapping in prelim test: 966 Number of HSP's gapped (non-prelim): 89 length of query: 296 length of database: 10,336,785 effective HSP length: 96 effective length of query: 200 effective length of database: 6,819,249 effective search space: 1363849800 effective search space used: 1363849800 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 58 (27.1 bits)