BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= Q96FX7
(289 letters)
Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
36,641 sequences; 10,336,785 total letters
Searching..................................................done
Results from round 1
Score E
Sequences producing significant alignments: (bits) Value
5CCX-A nrPDB 591 e-169
5EQJ-B nrPDB 186 7e-48
1O54-A nrPDB 119 2e-27
3LGA-A nrPDB 96 2e-20
1YB2-A nrPDB 82 3e-16
1I9G-A nrPDB 79 2e-15
2YVL-A nrPDB 67 7e-12
2PWY-A nrPDB 53 1e-07
2B25-A nrPDB 49 2e-06
5X7F-A nrPDB 39 0.003
4O29-A nrPDB 38 0.006
3TFW-A nrPDB 35 0.042
5N5D-A nrPDB 32 0.23
5OQL-R nrPDB 32 0.32
3TMA-A nrPDB 31 0.68
2YXE-A nrPDB 30 1.0
1JG3-A nrPDB 30 1.7
4F4F-A nrPDB 28 3.2
3LBF-A nrPDB 28 3.3
3CJR-A nrPDB 28 3.9
1DL5-A nrPDB 28 5.1
1E6V-A nrPDB 27 7.8
>5CCX-A nrPDB
Length = 289
Score = 591 bits (1524), Expect = e-169, Method: Compositional matrix adjust.
Identities = 289/289 (100%), Positives = 289/289 (100%)
Query: 1 MSFVAYEELIKEGDTAILSLGHGAMVAVRVQRGAQTQTRHGVLRHSVDLIGRPFGSKVTC 60
MSFVAYEELIKEGDTAILSLGHGAMVAVRVQRGAQTQTRHGVLRHSVDLIGRPFGSKVTC
Sbjct: 1 MSFVAYEELIKEGDTAILSLGHGAMVAVRVQRGAQTQTRHGVLRHSVDLIGRPFGSKVTC 60
Query: 61 GRGGWVYVLHPTPELWTLNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHA 120
GRGGWVYVLHPTPELWTLNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHA
Sbjct: 61 GRGGWVYVLHPTPELWTLNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHA 120
Query: 121 IIRTIAPTGHLHTVEFHQQRAEKAREEFQEHRVGRWVTVRTQDVCRSGFGVSHVADAVFL 180
IIRTIAPTGHLHTVEFHQQRAEKAREEFQEHRVGRWVTVRTQDVCRSGFGVSHVADAVFL
Sbjct: 121 IIRTIAPTGHLHTVEFHQQRAEKAREEFQEHRVGRWVTVRTQDVCRSGFGVSHVADAVFL 180
Query: 181 DIPSPWEAVGHAWDALKVEGGRFCSFSPCIEQVQRTCQALAARGFSELSTLEVLPQVYNV 240
DIPSPWEAVGHAWDALKVEGGRFCSFSPCIEQVQRTCQALAARGFSELSTLEVLPQVYNV
Sbjct: 181 DIPSPWEAVGHAWDALKVEGGRFCSFSPCIEQVQRTCQALAARGFSELSTLEVLPQVYNV 240
Query: 241 RTVSLPPPDLGTGTDGPAGSDTSPFRSGTPMKEAVGHTGYLTFATKTPG 289
RTVSLPPPDLGTGTDGPAGSDTSPFRSGTPMKEAVGHTGYLTFATKTPG
Sbjct: 241 RTVSLPPPDLGTGTDGPAGSDTSPFRSGTPMKEAVGHTGYLTFATKTPG 289
>5EQJ-B nrPDB
Length = 383
Score = 186 bits (473), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 105/263 (39%), Positives = 149/263 (56%), Gaps = 28/263 (10%)
Query: 3 FVAYEELIKEGDTAILSLGHGAMVAVRVQRGAQTQTRHGVLRHSVDLIGRPFGSKVT--- 59
F Y++LIKEGD ++ + + VR+ TR+G H D+IG+P+GS++
Sbjct: 6 FSGYKDLIKEGDLTLIWVSRDNIKPVRMHSEEVFNTRYGSFPHK-DIIGKPYGSQIAIRT 64
Query: 60 --CGRGGWVYVLHPTPELWTLNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSV 117
+ +V+VL PTPELWTL+LPHRTQI+Y+ D + I L P S V E+GTGSGS
Sbjct: 65 KGSNKFAFVHVLQPTPELWTLSLPHRTQIVYTPDSSYIMQRLNCSPHSRVIEAGTGSGSF 124
Query: 118 SHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEH-RVGRWVTVRTQDVCRSGF------- 169
SHA R++ GHL + EFH R E+A EEF+EH + VT+ +DVC+ GF
Sbjct: 125 SHAFARSV---GHLFSFEFHHIRYEQALEEFKEHGLIDDNVTITHRDVCQGGFLIKKGDT 181
Query: 170 ----------GVSHVADAVFLDIPSPWEAVGHAWDALKV-EGGRFCSFSPCIEQVQRTCQ 218
S A+ VFLD+P+PW+A+ H + V E C FSPCIEQV +T
Sbjct: 182 TSYEFGNNETAASLNANVVFLDLPAPWDAIPHLDSVISVDEKVGLCCFSPCIEQVDKTLD 241
Query: 219 ALAARGFSELSTLEVLPQVYNVR 241
L G++++ +E+ + Y R
Sbjct: 242 VLEKYGWTDVEMVEIQGRQYESR 264
>1O54-A nrPDB
Length = 277
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 129/278 (46%), Gaps = 27/278 (9%)
Query: 10 IKEGDTAILSLGHGAMVAVRVQRGAQTQTRHGVLRHSVDLIGRPFGSKVTCGRGGWVYVL 69
+K GD +LS + V +++ + T G++ + ++ + G + G Y+L
Sbjct: 20 LKPGDRVLLSFEDESEFLVDLEKDKKLHTHLGIIDLN-EVFEKGPGEIIRTSAGKKGYIL 78
Query: 70 HPTPELWTLNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTG 129
P+ +N+ RTQI+Y D + I MML+++ G + ++G GSG++ + R + +G
Sbjct: 79 IPSLIDEIMNMKRRTQIVYPKDSSFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSG 138
Query: 130 HLHTVEFHQQRAEKAREEFQEHRVGRWVTVRTQDVCRSGFGVSHVADAVFLDIPSPWEAV 189
+ E ++ A+ A + + VT++ +D+ GF V DA+FLD+P PW +
Sbjct: 139 KVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDIS-EGFDEKDV-DALFLDVPDPWNYI 196
Query: 190 GHAWDALKVEGGRFCSFSPCIEQVQRTCQALAARGFSELSTLEVLPQVYNVRTVSLPPPD 249
W+ALK GGRF + P QVQ T + L F + E L + Y P P+
Sbjct: 197 DKCWEALK-GGGRFATVCPTTNQVQETLKKLQELPFIRIEVWESLFRPYK------PVPE 249
Query: 250 LGTGTDGPAGSDTSPFRSGTPMKEAVGHTGYLTFATKT 287
P+ V HT Y+ FATK
Sbjct: 250 -----------------RLRPVDRMVAHTAYMIFATKV 270
>3LGA-A nrPDB
Length = 253
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 122/278 (43%), Gaps = 26/278 (9%)
Query: 9 LIKEGDTAILSLGHGAMVAVRVQRGAQTQTRHGVLRHSVDLIGRPFGSKVTCGRGGWVYV 68
+I+EGD +L G + V + T G+L+ ++IGR FG + +G +
Sbjct: 1 MIREGDKVVLVDPRGKRYLITVSK-RDFHTDLGILKLE-EIIGRNFGEAIKSHKGHEFKI 58
Query: 69 LHPTPELWTLNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPT 128
L P + + QI++ D ALI + PG + E+G GSG+++ + + P
Sbjct: 59 LRPRIVDYLDKMKRGPQIVHPKDAALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPE 118
Query: 129 GHLHTVEFHQQRAEKAREEFQEHRVGRWVTVRTQDVCRSGFGVSHVADAVFLDIPSPWEA 188
G + + E + A+ A E + VT++ +D+ G +V D V LD+P P
Sbjct: 119 GRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIY-EGIEEENV-DHVILDLPQPERV 176
Query: 189 VGHAWDALKVEGGRFCSFSPCIEQVQRTCQALAARGFSELSTLEVLPQVYNVRTVSLPPP 248
V HA ALK GG F +++PC QV R + L E + P+ NV
Sbjct: 177 VEHAAKALK-PGGFFVAYTPCSNQVMRLHEKL-----REFKDYFMKPRTINVLVF----- 225
Query: 249 DLGTGTDGPAGSDTSPFRSGTPMKEAVGHTGYLTFATK 286
D + P A+ HTGY+TFA +
Sbjct: 226 ------DQEVKKECM-----RPRTTALVHTGYITFARR 252
>1YB2-A nrPDB
Length = 275
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 94/219 (42%), Gaps = 28/219 (12%)
Query: 72 TPELWTLNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHL 131
+P + + TQI+ D + I M LRPG + E G GSG++S I+ + G L
Sbjct: 79 SPMYFGRVIRRNTQIISEIDASYIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTL 138
Query: 132 HTVEFHQQRAEKAREEFQE-HRVGRWVTVRTQDVCRSGFGVSHVADAVFLDIPSPWEAVG 190
VE + +KA + E + +G VRT + F + DAV DIP PW V
Sbjct: 139 TVVERDEDNLKKAMDNLSEFYDIG---NVRTSRSDIADFISDQMYDAVIADIPDPWNHVQ 195
Query: 191 HAWDALKVEGGRFCSFSPCIEQVQRTCQALAARGFSELSTLEVLPQVYNVRTVSLPPPDL 250
+K G + P +Q ++T +L+A G L T+E++ + VR
Sbjct: 196 KIASMMK-PGSVATFYLPNFDQSEKTVLSLSASGMHHLETVELMKRRILVR--------- 245
Query: 251 GTGTDGPAGSDTSPFRSGTPMKEAVGHTGYLTFATKTPG 289
G PA D + HT ++TFA K G
Sbjct: 246 -EGATRPASDDLT-------------HTAFITFAIKKSG 270
>1I9G-A nrPDB
Length = 280
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 108/239 (45%), Gaps = 8/239 (3%)
Query: 13 GDTAILSLGHGAMVAVRVQRGAQTQTRHGVLRHSVDLIGRPFGSKVTCGRGGWVYVLHPT 72
G+ L+ G + + GA+ T G + H +IG GS V G VL P
Sbjct: 10 GERVQLTDAKGRRYTMSLTPGAEFHTHRGSIAHDA-VIGLEQGSVVKSSNGALFLVLRPL 68
Query: 73 PELWTLNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLH 132
+ +++P Q++Y D A I ++ PG+ V E+G GSG+++ +++R + P G +
Sbjct: 69 LVDYVMSMPRGPQVIYPKDAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVI 128
Query: 133 TVEFHQQRAEKAREEFQ---EHRVGRWVTVRTQDVCRSGFGVSHVADAVFLDIPSPWEAV 189
+ E AE AR W V D+ S V D LD+ +PWE +
Sbjct: 129 SYEQRADHAEHARRNVSGCYGQPPDNWRLV-VSDLADSELPDGSV-DRAVLDMLAPWEVL 186
Query: 190 GHAWDALKVEGGRFCSFSPCIEQVQRTCQALAARG-FSELSTLEVLPQVYNVRTVSLPP 247
A L V GG + + Q+ R +AL A+ ++E E L + +NV +++ P
Sbjct: 187 -DAVSRLLVAGGVLMVYVATVTQLSRIVEALRAKQCWTEPRAWETLQRGWNVVGLAVRP 244
>2YVL-A nrPDB
Length = 248
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 122/280 (43%), Gaps = 41/280 (14%)
Query: 10 IKEGDTAILSLGHGAMVAVRVQRGAQTQTRHGVLRHSVDLIGRPFGSKVTCGRGGWVYVL 69
KEG+ ++ G + + + + + + VL+ ++IG+P G K+ G VY
Sbjct: 4 FKEGEYVLIRFGEKKFLRKLLPKQSLS-VKKSVLKFD-EVIGKPEGVKIN---GFEVY-- 56
Query: 70 HPT-PELWTLNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPT 128
PT E+ L +TQI+Y D I + L L V E GTGSG++ A++ +A
Sbjct: 57 RPTLEEIILLGFERKTQIIYPKDSFYIALKLNLNKEKRVLEFGTGSGALL-AVLSEVA-- 113
Query: 129 GHLHTVEFHQQRAEKAREEFQEHRVGRWVTVRTQDVCRSGF--GVSHVADAVFLDIPSPW 186
G + T E ++ + A++ ++ +G+ V D + G+ H A F+D+ PW
Sbjct: 114 GEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFH---AAFVDVREPW 170
Query: 187 EAVGHAWDALKVEGGRFCSFSPCIEQVQRTCQALAARGFSELSTLEVLPQVYNVRTVSLP 246
+ +L +EG P QV + +++ F L +E+L + Y +T+S
Sbjct: 171 HYLEKVHKSL-MEGAPVGFLLPTANQVIKLLESI-ENYFGNLEVVEILHRHY--KTIS-- 224
Query: 247 PPDLGTGTDGPAGSDTSPFRSGTPMKEAVGHTGYLTFATK 286
FR P + V HT YL F K
Sbjct: 225 ----------------ERFR---PEDQMVAHTAYLVFGRK 245
>2PWY-A nrPDB
Length = 258
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 10/175 (5%)
Query: 71 PTPELWTLNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGH 130
PT E + L++ Y D + + +L+L PG V E+GTGSG ++ + R + G
Sbjct: 64 PTLEEYLLHMKRSATPTYPKDASAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGL 123
Query: 131 LHTVE---FHQQRAEKAREEFQEHRVGRWVTVRTQDVCRSGFGVSHVADAVFLDIPSPWE 187
+ + E H +AE+ F + R+ + ++ D V LD+ PW+
Sbjct: 124 VESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELE----EAAYDGVALDLMEPWK 179
Query: 188 AVGHAWDALKVEGGRF-CSFSPCIEQVQRTCQALAARGFSELSTLEVLPQVYNVR 241
+ A AL ++ RF ++ P I QV +A A F LEV + + VR
Sbjct: 180 VLEKA--ALALKPDRFLVAYLPNITQVLELVRAAEAHPFRLERVLEVGWREWEVR 232
>2B25-A nrPDB
Length = 336
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 88/198 (44%), Gaps = 19/198 (9%)
Query: 49 LIGRPFGSKVTCGRGGWVYVLHPTPELWTLNLPHRTQILYSTDIALITMMLELRPGSVVC 108
++G+ G + G + P E + + + T I + DI +I M+++ PG V
Sbjct: 51 IVGKFPGQILRSSFGKQYMLRRPALEDYVVLMKRGTAITFPKDINMILSMMDINPGDTVL 110
Query: 109 ESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEHR-------VGRW---VT 158
E+G+GSG +S + + + G + + E + + A++ ++ R V W V
Sbjct: 111 EAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVD 170
Query: 159 VRTQDVCRSGFGVSHVA-DAVFLDIPSPWEAVGHAWDALKVEGGRFCSFSPCIEQV---- 213
+D+ + + + DAV LD+ +P + + LK GG + I QV
Sbjct: 171 FIHKDISGATEDIKSLTFDAVALDMLNPHVTLPVFYPHLK-HGGVCAVYVVNITQVIELL 229
Query: 214 --QRTCQ-ALAARGFSEL 228
RTC+ AL+ SE+
Sbjct: 230 DGIRTCELALSCEKISEV 247
>5X7F-A nrPDB
Length = 235
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 93 ALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEHR 152
AL+ ++ +L G V E GTG+G ++ + G L T++ + AR+ F E
Sbjct: 68 ALLCLLAKLSGGKAVAEVGTGAGVSGLWLLSGMRDDGVLTTIDIEPEHLRLARQAFAEAG 127
Query: 153 VG----RWVTVRTQDVCRSGFGVSHVADAVFLD 181
+G R ++ R Q+V S+ D VF+D
Sbjct: 128 IGPSRTRLISGRAQEVLTRLADASY--DLVFID 158
>4O29-A nrPDB
Length = 208
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 10/80 (12%)
Query: 77 TLNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEF 136
T++ PH +A++ ++E RPG + E GTGSG + I G ++T+E
Sbjct: 57 TISAPHM--------VAMMCELIEPRPGMKILEVGTGSGYHAAVCAEAIEKKGRIYTIEI 108
Query: 137 HQQRAEKAREEFQEHRVGRW 156
++ A A + + R+G W
Sbjct: 109 VKELAVFAAQNLE--RLGYW 126
>3TFW-A nrPDB
Length = 248
Score = 35.0 bits (79), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Query: 94 LITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEHRV 153
+ +++ L + E GT G + + R + G L T+E A+ ARE Q V
Sbjct: 54 FLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGV 113
Query: 154 GRWVTVRTQDVCRS--GFGVSHVADAVFLDIPSP 185
+ VT+R +S G D +F+D P
Sbjct: 114 DQRVTLREGPALQSLESLGECPAFDLIFIDADKP 147
>5N5D-A nrPDB
Length = 226
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 29/64 (45%)
Query: 94 LITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEHRV 153
L+ ++ LR + E GT G S + R + P G L T+E+ + AE A E V
Sbjct: 52 LLHLLARLRQARRILEIGTFGGYSSIWLARALPPDGRLVTIEWERSFAESAASRLAEAGV 111
Query: 154 GRWV 157
V
Sbjct: 112 AHLV 115
>5OQL-R nrPDB
Length = 313
Score = 32.0 bits (71), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 56/129 (43%), Gaps = 7/129 (5%)
Query: 99 LELRPGSVVCESGTGSG-SVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEHRVGRWV 157
+ ++PGS V G SG SVSH + + PTG ++ VEF R+ + R
Sbjct: 148 IYMKPGSKVLYLGAASGTSVSH-VADIVGPTGAVYAVEF-SHRSGRDLINMATRRTNVIP 205
Query: 158 TVRTQDVCRSGFGVSHVADAVFLDIPSPWEA--VG-HAWDALKVEGGRFCSF-SPCIEQV 213
V + + + D +F D+ P +A VG +A LK GG S + CI+
Sbjct: 206 IVEDARKPMAYRMLVPMVDVIFADVAQPDQARIVGINARLFLKQGGGLLISIKASCIDST 265
Query: 214 QRTCQALAA 222
Q A+
Sbjct: 266 APPEQVFAS 274
>3TMA-A nrPDB
Length = 354
Score = 30.8 bits (68), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%)
Query: 95 ITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKARE 146
+ + + RPG V + TGSG+++ T+ PT ++ + ++R ARE
Sbjct: 195 LLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLARE 246
>2YXE-A nrPDB
Length = 215
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 28/53 (52%)
Query: 92 IALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKA 144
+ ++ +L+L+PG V E GTG G + + G + ++E + AEKA
Sbjct: 66 VGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKA 118
>1JG3-A nrPDB
Length = 235
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 10/79 (12%)
Query: 71 PTPELWTLNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGH 130
P P T++ PH +A++ + L+PG + E GTGSG + A+I I T
Sbjct: 67 PIPAGQTVSAPHM--------VAIMLEIANLKPGMNILEVGTGSGW-NAALISEIVKT-D 116
Query: 131 LHTVEFHQQRAEKAREEFQ 149
++T+E + E A+ +
Sbjct: 117 VYTIERIPELVEFAKRNLE 135
>4F4F-A nrPDB
Length = 468
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 18/95 (18%)
Query: 195 ALKVEGGRFCSFSPCIEQVQ------RTCQALAARGFSELSTLEVLPQV--YNVRTVSLP 246
AL +EG +F C V+ C AL+ G + ++ ++PQV Y +SL
Sbjct: 192 ALSIEG----NFDDCQNLVKGMFNDLEFCDALSLSGVNSINWARIMPQVVYYFTAALSLG 247
Query: 247 PPDLGTGTDGPAGSDTSPF------RSGTPMKEAV 275
PD P G+ F R G P+++ +
Sbjct: 248 APDRAVSFTVPTGNFGDIFAGYVAKRMGLPIEQLI 282
>3LBF-A nrPDB
Length = 210
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 30/62 (48%)
Query: 92 IALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEH 151
+A +T +LEL P S V E GTGSG + + + + ++ Q +A + + H
Sbjct: 66 VARMTELLELTPQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLKNLDLH 125
Query: 152 RV 153
V
Sbjct: 126 NV 127
>3CJR-A nrPDB
Length = 254
Score = 28.5 bits (62), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 89 STDIALITMMLELRPGSVVCESGTGSGSVSHA 120
+T +AL + LRPG V + GTGSG ++ A
Sbjct: 106 TTRLALKALARHLRPGDKVLDLGTGSGVLAIA 137
>1DL5-A nrPDB
Length = 317
Score = 28.1 bits (61), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 52/120 (43%), Gaps = 13/120 (10%)
Query: 89 STDIALITMMLE---LRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAR 145
S+ +L+ + +E L G V E G G+G + + R + G + +VE+ ++ E A+
Sbjct: 58 SSQPSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAK 117
Query: 146 EEFQEHRVGRWVTVRTQDVCRSG-FGVSHVA--DAVFLDIPSPWEAVGHAWDALKVEGGR 202
V R VC G +GV + D +F+ + + V W EGGR
Sbjct: 118 -----RNVERLGIENVIFVCGDGYYGVPEFSPYDVIFVTVGV--DEVPETWFTQLKEGGR 170
>1E6V-A nrPDB
Length = 553
Score = 27.3 bits (59), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 39/94 (41%), Gaps = 10/94 (10%)
Query: 142 EKAREEFQEHRVGRWVTVRTQDVCRSGFGVSHVADAVFLDIPSPWEAVGHAWDALKVEGG 201
EK E Q ++ + + RT VCR V HV D A + W A+++
Sbjct: 188 EKLFPEEQAEQLIKAIGNRTYQVCRMPTIVGHVCDG----------ATMYRWAAMQIAMS 237
Query: 202 RFCSFSPCIEQVQRTCQALAARGFSELSTLEVLP 235
C++ + + A A++ ++ E+LP
Sbjct: 238 FICAYKIAAGEAAVSDFAFASKHAEVINMGEMLP 271
Searching..................................................done
Results from round 2
Score E
Sequences producing significant alignments: (bits) Value
Sequences used in model and found again:
5CCX-A nrPDB 396 e-111
1O54-A nrPDB 298 2e-81
3LGA-A nrPDB 284 2e-77
5EQJ-B nrPDB 278 2e-75
1I9G-A nrPDB 262 1e-70
2YVL-A nrPDB 232 1e-61
2B25-A nrPDB 213 9e-56
2PWY-A nrPDB 211 3e-55
1YB2-A nrPDB 206 6e-54
Sequences not found previously or not previously below threshold:
1DL5-A nrPDB 57 9e-09
2YXE-A nrPDB 54 9e-08
1JG3-A nrPDB 53 1e-07
3TFW-A nrPDB 53 2e-07
4O29-A nrPDB 53 2e-07
3DUW-A nrPDB 49 2e-06
1KR5-A nrPDB 48 4e-06
3MGG-A nrPDB 48 5e-06
5BP7-A nrPDB 48 6e-06
3LBF-A nrPDB 47 9e-06
5X7F-A nrPDB 45 4e-05
1VBF-A nrPDB 44 5e-05
4L7V-A nrPDB 44 6e-05
3BUS-A nrPDB 44 1e-04
3BKX-A nrPDB 44 1e-04
5N5D-A nrPDB 43 1e-04
1YUB-A nrPDB 43 1e-04
3CCF-A nrPDB 43 2e-04
1NKV-A nrPDB 43 2e-04
5EKU-A nrPDB 41 6e-04
4M36-A nrPDB 41 6e-04
3E05-A nrPDB 41 7e-04
3EEY-A nrPDB 41 8e-04
1UWV-A nrPDB 40 0.001
3M6U-A nrPDB 40 0.001
3TMA-A nrPDB 40 0.001
2IPX-A nrPDB 40 0.001
1R18-A nrPDB 40 0.001
2PBF-A nrPDB 39 0.002
3DLC-A nrPDB 39 0.003
5BXY-A nrPDB 39 0.003
3R3H-A nrPDB 39 0.003
6EC3-A nrPDB 38 0.004
5LOG-A nrPDB 38 0.004
6BQC-A nrPDB 38 0.004
3HM2-A nrPDB 38 0.006
2PXX-A nrPDB 38 0.006
2HNK-A nrPDB 37 0.009
2AS0-A nrPDB 37 0.011
4INE-A nrPDB 37 0.011
4OA5-A nrPDB 37 0.012
4DF3-A nrPDB 36 0.014
5WYK-3B nrPDB 36 0.015
3C3P-A nrPDB 36 0.016
5EVJ-A nrPDB 36 0.017
3M4X-A nrPDB 36 0.017
5OQL-R nrPDB 36 0.018
3CBG-A nrPDB 36 0.021
4KDR-A nrPDB 36 0.023
3VC2-A nrPDB 36 0.026
3R9X-B nrPDB 36 0.026
4PON-A nrPDB 35 0.032
1SQG-A nrPDB 35 0.034
1QAM-A nrPDB 35 0.037
3EVZ-A nrPDB 34 0.061
6IFX-A nrPDB 34 0.062
5YLN-A nrPDB 34 0.062
3NJR-A nrPDB 34 0.068
2VS1-A nrPDB 34 0.071
2B3T-A nrPDB 34 0.071
3D2L-A nrPDB 34 0.097
6IFV-A nrPDB 33 0.11
3R0Q-C nrPDB 33 0.12
1ZQ9-A nrPDB 33 0.14
1EIZ-A nrPDB 33 0.20
2NNW-B nrPDB 33 0.22
4FZV-A nrPDB 33 0.23
2YXD-A nrPDB 33 0.23
4KDC-A nrPDB 32 0.28
5WWT-A nrPDB 31 0.44
3DMF-A nrPDB 31 0.45
4F86-A nrPDB 31 0.49
4FS8-A nrPDB 31 0.55
5WP5-A nrPDB 31 0.56
5FUB-A nrPDB 31 0.61
3CJR-A nrPDB 31 0.88
4DZR-A nrPDB 30 0.96
3E23-A nrPDB 30 1.0
6H1E-A nrPDB 30 1.3
4JJI-A nrPDB 30 1.5
1TPY-A nrPDB 29 2.1
1VQ1-A nrPDB 29 2.6
3W53-A nrPDB 29 3.3
1F8F-A nrPDB 29 3.3
5TNX-A nrPDB 28 4.0
>5CCX-A nrPDB
Length = 289
Score = 396 bits (1017), Expect = e-111, Method: Composition-based stats.
Identities = 289/289 (100%), Positives = 289/289 (100%)
Query: 1 MSFVAYEELIKEGDTAILSLGHGAMVAVRVQRGAQTQTRHGVLRHSVDLIGRPFGSKVTC 60
MSFVAYEELIKEGDTAILSLGHGAMVAVRVQRGAQTQTRHGVLRHSVDLIGRPFGSKVTC
Sbjct: 1 MSFVAYEELIKEGDTAILSLGHGAMVAVRVQRGAQTQTRHGVLRHSVDLIGRPFGSKVTC 60
Query: 61 GRGGWVYVLHPTPELWTLNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHA 120
GRGGWVYVLHPTPELWTLNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHA
Sbjct: 61 GRGGWVYVLHPTPELWTLNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHA 120
Query: 121 IIRTIAPTGHLHTVEFHQQRAEKAREEFQEHRVGRWVTVRTQDVCRSGFGVSHVADAVFL 180
IIRTIAPTGHLHTVEFHQQRAEKAREEFQEHRVGRWVTVRTQDVCRSGFGVSHVADAVFL
Sbjct: 121 IIRTIAPTGHLHTVEFHQQRAEKAREEFQEHRVGRWVTVRTQDVCRSGFGVSHVADAVFL 180
Query: 181 DIPSPWEAVGHAWDALKVEGGRFCSFSPCIEQVQRTCQALAARGFSELSTLEVLPQVYNV 240
DIPSPWEAVGHAWDALKVEGGRFCSFSPCIEQVQRTCQALAARGFSELSTLEVLPQVYNV
Sbjct: 181 DIPSPWEAVGHAWDALKVEGGRFCSFSPCIEQVQRTCQALAARGFSELSTLEVLPQVYNV 240
Query: 241 RTVSLPPPDLGTGTDGPAGSDTSPFRSGTPMKEAVGHTGYLTFATKTPG 289
RTVSLPPPDLGTGTDGPAGSDTSPFRSGTPMKEAVGHTGYLTFATKTPG
Sbjct: 241 RTVSLPPPDLGTGTDGPAGSDTSPFRSGTPMKEAVGHTGYLTFATKTPG 289
>1O54-A nrPDB
Length = 277
Score = 298 bits (763), Expect = 2e-81, Method: Composition-based stats.
Identities = 77/280 (27%), Positives = 130/280 (46%), Gaps = 27/280 (9%)
Query: 8 ELIKEGDTAILSLGHGAMVAVRVQRGAQTQTRHGVLRHSVDLIGRPFGSKVTCGRGGWVY 67
+ +K GD +LS + V +++ + T G++ + ++ + G + G Y
Sbjct: 18 DTLKPGDRVLLSFEDESEFLVDLEKDKKLHTHLGIIDLN-EVFEKGPGEIIRTSAGKKGY 76
Query: 68 VLHPTPELWTLNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAP 127
+L P+ +N+ RTQI+Y D + I MML+++ G + ++G GSG++ + R +
Sbjct: 77 ILIPSLIDEIMNMKRRTQIVYPKDSSFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGS 136
Query: 128 TGHLHTVEFHQQRAEKAREEFQEHRVGRWVTVRTQDVCRSGFGVSHVADAVFLDIPSPWE 187
+G + E ++ A+ A + + VT++ +D+ GF V DA+FLD+P PW
Sbjct: 137 SGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDIS-EGFDEKDV-DALFLDVPDPWN 194
Query: 188 AVGHAWDALKVEGGRFCSFSPCIEQVQRTCQALAARGFSELSTLEVLPQVYNVRTVSLPP 247
+ W+ALK GGRF + P QVQ T + L F + E L + Y P
Sbjct: 195 YIDKCWEALK-GGGRFATVCPTTNQVQETLKKLQELPFIRIEVWESLFRPYK------PV 247
Query: 248 PDLGTGTDGPAGSDTSPFRSGTPMKEAVGHTGYLTFATKT 287
P+ P+ V HT Y+ FATK
Sbjct: 248 PE-----------------RLRPVDRMVAHTAYMIFATKV 270
>3LGA-A nrPDB
Length = 253
Score = 284 bits (727), Expect = 2e-77, Method: Composition-based stats.
Identities = 77/279 (27%), Positives = 122/279 (43%), Gaps = 26/279 (9%)
Query: 9 LIKEGDTAILSLGHGAMVAVRVQRGAQTQTRHGVLRHSVDLIGRPFGSKVTCGRGGWVYV 68
+I+EGD +L G + V + T G+L+ ++IGR FG + +G +
Sbjct: 1 MIREGDKVVLVDPRGKRYLITVSK-RDFHTDLGILKLE-EIIGRNFGEAIKSHKGHEFKI 58
Query: 69 LHPTPELWTLNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPT 128
L P + + QI++ D ALI + PG + E+G GSG+++ + + P
Sbjct: 59 LRPRIVDYLDKMKRGPQIVHPKDAALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPE 118
Query: 129 GHLHTVEFHQQRAEKAREEFQEHRVGRWVTVRTQDVCRSGFGVSHVADAVFLDIPSPWEA 188
G + + E + A+ A E + VT++ +D+ G +V D V LD+P P
Sbjct: 119 GRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIY-EGIEEENV-DHVILDLPQPERV 176
Query: 189 VGHAWDALKVEGGRFCSFSPCIEQVQRTCQALAARGFSELSTLEVLPQVYNVRTVSLPPP 248
V HA ALK GG F +++PC QV R + L E + P+ NV
Sbjct: 177 VEHAAKALK-PGGFFVAYTPCSNQVMRLHEKL-----REFKDYFMKPRTINVLVF----- 225
Query: 249 DLGTGTDGPAGSDTSPFRSGTPMKEAVGHTGYLTFATKT 287
D + P A+ HTGY+TFA +
Sbjct: 226 ------DQEVKKECM-----RPRTTALVHTGYITFARRI 253
>5EQJ-B nrPDB
Length = 383
Score = 278 bits (711), Expect = 2e-75, Method: Composition-based stats.
Identities = 105/263 (39%), Positives = 149/263 (56%), Gaps = 28/263 (10%)
Query: 3 FVAYEELIKEGDTAILSLGHGAMVAVRVQRGAQTQTRHGVLRHSVDLIGRPFGSKVT--- 59
F Y++LIKEGD ++ + + VR+ TR+G H D+IG+P+GS++
Sbjct: 6 FSGYKDLIKEGDLTLIWVSRDNIKPVRMHSEEVFNTRYGSFPHK-DIIGKPYGSQIAIRT 64
Query: 60 --CGRGGWVYVLHPTPELWTLNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSV 117
+ +V+VL PTPELWTL+LPHRTQI+Y+ D + I L P S V E+GTGSGS
Sbjct: 65 KGSNKFAFVHVLQPTPELWTLSLPHRTQIVYTPDSSYIMQRLNCSPHSRVIEAGTGSGSF 124
Query: 118 SHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEHR-VGRWVTVRTQDVCRSGF------- 169
SHA R++ GHL + EFH R E+A EEF+EH + VT+ +DVC+ GF
Sbjct: 125 SHAFARSV---GHLFSFEFHHIRYEQALEEFKEHGLIDDNVTITHRDVCQGGFLIKKGDT 181
Query: 170 ----------GVSHVADAVFLDIPSPWEAVGHAWDALKV-EGGRFCSFSPCIEQVQRTCQ 218
S A+ VFLD+P+PW+A+ H + V E C FSPCIEQV +T
Sbjct: 182 TSYEFGNNETAASLNANVVFLDLPAPWDAIPHLDSVISVDEKVGLCCFSPCIEQVDKTLD 241
Query: 219 ALAARGFSELSTLEVLPQVYNVR 241
L G++++ +E+ + Y R
Sbjct: 242 VLEKYGWTDVEMVEIQGRQYESR 264
>1I9G-A nrPDB
Length = 280
Score = 262 bits (668), Expect = 1e-70, Method: Composition-based stats.
Identities = 70/278 (25%), Positives = 114/278 (41%), Gaps = 31/278 (11%)
Query: 13 GDTAILSLGHGAMVAVRVQRGAQTQTRHGVLRHSVDLIGRPFGSKVTCGRGGWVYVLHPT 72
G+ L+ G + + GA+ T G + H +IG GS V G VL P
Sbjct: 10 GERVQLTDAKGRRYTMSLTPGAEFHTHRGSIAHDA-VIGLEQGSVVKSSNGALFLVLRPL 68
Query: 73 PELWTLNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLH 132
+ +++P Q++Y D A I ++ PG+ V E+G GSG+++ +++R + P G +
Sbjct: 69 LVDYVMSMPRGPQVIYPKDAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVI 128
Query: 133 TVEFHQQRAEKAREEFQ---EHRVGRWVTVRTQDVCRSGFGVSHVADAVFLDIPSPWEAV 189
+ E AE AR W V D+ S V D LD+ +PWE +
Sbjct: 129 SYEQRADHAEHARRNVSGCYGQPPDNWRLV-VSDLADSELPDGSV-DRAVLDMLAPWEVL 186
Query: 190 GHAWDALKVEGGRFCSFSPCIEQVQRTCQALAARG-FSELSTLEVLPQVYNVRTVSLPPP 248
A L V GG + + Q+ R +AL A+ ++E E L + +NV +++
Sbjct: 187 D-AVSRLLVAGGVLMVYVATVTQLSRIVEALRAKQCWTEPRAWETLQRGWNVVGLAV--- 242
Query: 249 DLGTGTDGPAGSDTSPFRSGTPMKEAVGHTGYLTFATK 286
P GHT +L +
Sbjct: 243 --------------------RPQHSMRGHTAFLVATRR 260
>2YVL-A nrPDB
Length = 248
Score = 232 bits (591), Expect = 1e-61, Method: Composition-based stats.
Identities = 66/278 (23%), Positives = 114/278 (41%), Gaps = 37/278 (13%)
Query: 10 IKEGDTAILSLGHGAMVAVRVQRGAQTQTRHGVLRHSVDLIGRPFGSKVTCGRGGWVYVL 69
KEG+ ++ G + + + + + + VL+ ++IG+P G K+ G VY
Sbjct: 4 FKEGEYVLIRFGEKKFLRKLLPKQSLS-VKKSVLKFD-EVIGKPEGVKIN---GFEVY-- 56
Query: 70 HPTPELW-TLNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPT 128
PT E L +TQI+Y D I + L L V E GTGSG++ A++ +A
Sbjct: 57 RPTLEEIILLGFERKTQIIYPKDSFYIALKLNLNKEKRVLEFGTGSGAL-LAVLSEVA-- 113
Query: 129 GHLHTVEFHQQRAEKAREEFQEHRVGRWVTVRTQDVCRSGFGVSHVADAVFLDIPSPWEA 188
G + T E ++ + A++ ++ +G+ V D + + A F+D+ PW
Sbjct: 114 GEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEG-IFHAAFVDVREPWHY 172
Query: 189 VGHAWDALKVEGGRFCSFSPCIEQVQRTCQALAARGFSELSTLEVLPQVYNVRTVSLPPP 248
+ +L +EG P QV + +++ F L +E+L + Y
Sbjct: 173 LEKVHKSL-MEGAPVGFLLPTANQVIKLLESIE-NYFGNLEVVEILHRHYK--------- 221
Query: 249 DLGTGTDGPAGSDTSPFRSGTPMKEAVGHTGYLTFATK 286
+ P + V HT YL F K
Sbjct: 222 --------------TISERFRPEDQMVAHTAYLVFGRK 245
>2B25-A nrPDB
Length = 336
Score = 213 bits (541), Expect = 9e-56, Method: Composition-based stats.
Identities = 52/255 (20%), Positives = 100/255 (39%), Gaps = 18/255 (7%)
Query: 2 SFVAYEELIKEGDTAILSLGHGA---MVAVRVQRGAQTQTRHGVLRHSVDLIGRPFGSKV 58
S + E + G+ + G G R+ + G + ++G+ G +
Sbjct: 2 SSTSRERPFQAGELILAETGEGETKFKKLFRLNNFGLLNSNWGAVPF-GKIVGKFPGQIL 60
Query: 59 TCGRGGWVYVLHPTPELWTLNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVS 118
G + P E + + + T I + DI +I M+++ PG V E+G+GSG +S
Sbjct: 61 RSSFGKQYMLRRPALEDYVVLMKRGTAITFPKDINMILSMMDINPGDTVLEAGSGSGGMS 120
Query: 119 HAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEHR-------VGRW---VTVRTQDVCRSG 168
+ + + G + + E + + A++ ++ R V W V +D+ +
Sbjct: 121 LFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGAT 180
Query: 169 FGVSHVA-DAVFLDIPSPWEAVGHAWDALKVEGGRFCSFSPCIEQVQRTCQALA--ARGF 225
+ + DAV LD+ +P + + LK GG + I QV +
Sbjct: 181 EDIKSLTFDAVALDMLNPHVTLPVFYPHLK-HGGVCAVYVVNITQVIELLDGIRTCELAL 239
Query: 226 SELSTLEVLPQVYNV 240
S EV+ + + V
Sbjct: 240 SCEKISEVIVRDWLV 254
>2PWY-A nrPDB
Length = 258
Score = 211 bits (537), Expect = 3e-55, Method: Composition-based stats.
Identities = 65/277 (23%), Positives = 100/277 (36%), Gaps = 32/277 (11%)
Query: 16 AILSLGHGAMVAVRVQRGAQTQTRHGVLRHSVDLIGRPFGSKVTCGRGGWVYVLHPTPEL 75
+L G V + G G + H L+ G V G + V PT E
Sbjct: 10 LLLKDRKGRAYLVFPKEGGVFHHHKGSVPHEA-LLEAGPGGVVRTHLGEELSVHRPTLEE 68
Query: 76 WTLNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVE 135
+ L++ Y D + + +L+L PG V E+GTGSG ++ + R + G + + E
Sbjct: 69 YLLHMKRSATPTYPKDASAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYE 128
Query: 136 ---FHQQRAEKAREEFQEHRVGRWVTVRTQDVCRSGFGVSHVADAVFLDIPSPWEAVGHA 192
H +AE+ F + R+ + D V LD+ PW+ + A
Sbjct: 129 ARPHHLAQAERNVRAFWQVENVRFHLGKL----EEAELEEAAYDGVALDLMEPWKVLEKA 184
Query: 193 WDALKVEGGRFCSFSPCIEQVQRTCQALAARGFSELSTLEVLPQVYNVRTVSLPPPDLGT 252
ALK ++ P I QV +A A F LEV + + VR
Sbjct: 185 ALALK-PDRFLVAYLPNITQVLELVRAAEAHPFRLERVLEVGWREWEVR----------- 232
Query: 253 GTDGPAGSDTSPFRSGTPMKEAVGHTGYLTFATKTPG 289
P + VGHT +L + G
Sbjct: 233 ------------LPVAHPRFQQVGHTAFLVALRRWKG 257
>1YB2-A nrPDB
Length = 275
Score = 206 bits (525), Expect = 6e-54, Method: Composition-based stats.
Identities = 66/238 (27%), Positives = 99/238 (41%), Gaps = 29/238 (12%)
Query: 53 PFGSKVTCGRGGWVYVLHPTPELWTLNLPHRTQILYSTDIALITMMLELRPGSVVCESGT 112
G ++ G V +P + + TQI+ D + I M LRPG + E G
Sbjct: 61 EPGDELIVS-GKSFIVSDFSPMYFGRVIRRNTQIISEIDASYIIMRCGLRPGMDILEVGV 119
Query: 113 GSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQE-HRVGRWVTVRTQDVCRSGFGV 171
GSG++S I+ + G L VE + +KA + E + +G VRT + F
Sbjct: 120 GSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIG---NVRTSRSDIADFIS 176
Query: 172 SHVADAVFLDIPSPWEAVGHAWDALKVEGGRFCSFSPCIEQVQRTCQALAARGFSELSTL 231
+ DAV DIP PW V +K G + P +Q ++T +L+A G L T+
Sbjct: 177 DQMYDAVIADIPDPWNHVQKIASMMK-PGSVATFYLPNFDQSEKTVLSLSASGMHHLETV 235
Query: 232 EVLPQVYNVRTVSLPPPDLGTGTDGPAGSDTSPFRSGTPMKEAVGHTGYLTFATKTPG 289
E++ + VR G PA D + HT ++TFA K G
Sbjct: 236 ELMKRRILVR----------EGATRPASDDLT-------------HTAFITFAIKKSG 270
>1DL5-A nrPDB
Length = 317
Score = 57.2 bits (136), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/171 (20%), Positives = 58/171 (33%), Gaps = 12/171 (7%)
Query: 39 RHGVLRHSVDLIGRPFGSKVTCGRGGWVYVLHPTPELWTLNL----PHRTQILYSTDIAL 94
++GV H I + F Y L E L + + +AL
Sbjct: 11 KYGVSDH----IAKAFLEIPREEFLTKSYPLSYVYEDIVLVSYDDGEEYSTSSQPSLMAL 66
Query: 95 ITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEHRVG 154
+ L G V E G G+G + + R + G + +VE+ ++ E A+ + +
Sbjct: 67 FMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGI- 125
Query: 155 RWVTVRTQDVCRSGFGVSHVADAVFLDIPSPWEAVGHAWDALKVEGGRFCS 205
V D G D +F+ + + V W EGGR
Sbjct: 126 ENVIFVCGDGYY-GVPEFSPYDVIFVTVGV--DEVPETWFTQLKEGGRVIV 173
>2YXE-A nrPDB
Length = 215
Score = 53.7 bits (127), Expect = 9e-08, Method: Composition-based stats.
Identities = 34/174 (19%), Positives = 56/174 (32%), Gaps = 18/174 (10%)
Query: 58 VTCGRGGWVYVLHPTPELWTLNLPHRTQILYSTDIAL------------ITMMLELRPGS 105
+ R + P E +L + +I + +L+L+PG
Sbjct: 20 IKSKRVIDALLKVPREEFLPEHLKEYAYVDTPLEIGYGQTISAIHMVGMMCELLDLKPGM 79
Query: 106 VVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEHRVGRWVTVRTQDVC 165
V E GTG G + + G + ++E + AEKA ++ V V D
Sbjct: 80 KVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYD-NVIVIVGDGT 138
Query: 166 RSGFGVSHVADAVFLDIPSPWEAVGHAWDALKVEGGRFCSFSPCIEQVQRTCQA 219
G+ D ++ P + LK G P +QR A
Sbjct: 139 L-GYEPLAPYDRIYTTAAGP-KIPEPLIRQLKDGGKLLM---PVGRYLQRLVLA 187
>1JG3-A nrPDB
Length = 235
Score = 53.3 bits (126), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 52/127 (40%), Gaps = 5/127 (3%)
Query: 74 ELWTLNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHT 133
L +P + +A++ + L+PG + E GTGSG + I + ++T
Sbjct: 62 IDEPLPIPAGQTVSAPHMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIV--KTDVYT 119
Query: 134 VEFHQQRAEKAREEFQEHRVGRWVTVRTQDVCRSGFGVSHVADAVFLDIPSPWEAVGHAW 193
+E + E A+ + V + V V D + GF D + + +P +
Sbjct: 120 IERIPELVEFAKRNLERAGV-KNVHVILGDGSK-GFPPKAPYDVIIVTAGAP-KIPEPLI 176
Query: 194 DALKVEG 200
+ LK+ G
Sbjct: 177 EQLKIGG 183
>3TFW-A nrPDB
Length = 248
Score = 52.9 bits (125), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 2/94 (2%)
Query: 94 LITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEHRV 153
+ +++ L + E GT G + + R + G L T+E A+ ARE Q V
Sbjct: 54 FLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGV 113
Query: 154 GRWVTVRTQDV--CRSGFGVSHVADAVFLDIPSP 185
+ VT+R G D +F+D P
Sbjct: 114 DQRVTLREGPALQSLESLGECPAFDLIFIDADKP 147
>4O29-A nrPDB
Length = 208
Score = 52.5 bits (124), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 59/151 (39%), Gaps = 5/151 (3%)
Query: 74 ELWTLNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHT 133
E L L I +A++ ++E RPG + E GTGSG + I G ++T
Sbjct: 46 EDRPLPLFAGATISAPHMVAMMCELIEPRPGMKILEVGTGSGYHAAVCAEAIEKKGRIYT 105
Query: 134 VEFHQQRAEKAREEFQEHRVGRWVTVRTQDVCRSGFGVSHVADAVFLDIPSPWEAVGHAW 193
+E ++ A A + + V V D + G DA+ + + + + A
Sbjct: 106 IEIVKELAVFAAQNLERLGYWGVVEVYHGDGKK-GLEKHAPFDAIIVTAAA--DVIPPAL 162
Query: 194 DALKVEGGRFCSFSPCIEQVQRTCQALAARG 224
+GG P E++ + + RG
Sbjct: 163 IRQLKDGGVMV--IPVEERLGQVLYKVVKRG 191
>3DUW-A nrPDB
Length = 223
Score = 49.1 bits (115), Expect = 2e-06, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 36/75 (48%)
Query: 87 LYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKARE 146
+ T + ++++++ + E GT G + + R ++ G + T+E ++ A+ AR
Sbjct: 42 VSPTQGKFLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARS 101
Query: 147 EFQEHRVGRWVTVRT 161
+ + V VRT
Sbjct: 102 NIERANLNDRVEVRT 116
>1KR5-A nrPDB
Length = 226
Score = 48.3 bits (113), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 44/126 (34%), Gaps = 7/126 (5%)
Query: 101 LRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEHRVGRWVTVR 160
L G+ + G+GSG ++ R + TG + ++ ++ + + ++ + R
Sbjct: 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGR 134
Query: 161 TQDVCRS---GFGVSHVADAVFLDIPSPWEAVGHAWDALKVEGGRFCSFS--PCIEQVQR 215
Q V G+ DA+ + +P V A GGR Q+
Sbjct: 135 VQLVVGDGRMGYAEEAPYDAIHVGAAAP--VVPQALIDQLKPGGRLILPVGPAGGNQMLE 192
Query: 216 TCQALA 221
L
Sbjct: 193 QYDKLQ 198
>3MGG-A nrPDB
Length = 276
Score = 47.9 bits (112), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 8/103 (7%)
Query: 103 PGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEHRVGRWVTVRTQ 162
PG+ V E+G G G+ + + + P + +++ + EKARE +++ + + V
Sbjct: 37 PGAKVLEAGCGIGAQTVILAKN-NPDAEITSIDISPESLEKARENTEKNGI-KNVKFLQA 94
Query: 163 DVCRSGFGVSHVADAVFL-----DIPSPWEAVGHAWDALKVEG 200
++ F S D +F+ + SP EA+ LK G
Sbjct: 95 NIFSLPFEDSS-FDHIFVCFVLEHLQSPEEALKSLKKVLKPGG 136
>5BP7-A nrPDB
Length = 271
Score = 47.5 bits (111), Expect = 6e-06, Method: Composition-based stats.
Identities = 38/224 (16%), Positives = 63/224 (28%), Gaps = 18/224 (8%)
Query: 64 GWVYVLHPTPELWTLNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIR 123
+ P T + + + + L L PG+ V + G+GSG + R
Sbjct: 20 FQSMLDIPRIFTITESAHRIHNPITPEKLTTLGAALRLEPGTRVLDLGSGSGEMLCTWAR 79
Query: 124 TIAPTGHLHTVEFHQQRAEKAREEFQEHRVGRWVTVRTQDVCRSGFGVSHVADAVFLDIP 183
G ++ Q +A+ +E V VT D V +
Sbjct: 80 DHGIIGT--GIDMSQLFTAQAKLRAEELGVADRVTFIHGDASGYVSDDKA---GVAACVG 134
Query: 184 SPW------EAVGHAWDALKVEGGRFCS-----FSPCIEQVQRTCQALAARGF-SELSTL 231
+ W + +L+ G P E V R C A + F L
Sbjct: 135 ATWIGGGVAGTIELLARSLRPGGIILIGEPYWRQVPPTEDVARGCLANSTSDFLMLPELL 194
Query: 232 EVLPQ-VYNVRTVSLPPPDLGTGTDGPAGSDTSPFRSGTPMKEA 274
+ Y+V + L D + + P E
Sbjct: 195 ASFGRLGYDVVEMVLADQDGWDRYEAAKWLTMRRWLEANPDDEL 238
>3LBF-A nrPDB
Length = 210
Score = 47.1 bits (110), Expect = 9e-06, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 54/141 (38%), Gaps = 7/141 (4%)
Query: 78 LNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFH 137
L + I +A +T +LEL P S V E GTGSG + + + H+ +VE
Sbjct: 52 LPIGQGQTISQPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHLVQ---HVCSVERI 108
Query: 138 QQRAEKAREEFQEHRVGRWVTVRTQDVCRSGFGVSHVADAVFLDIPSPWEAVGHAWDALK 197
+ +AR + + V+ R D + G+ DA+ + P + A
Sbjct: 109 KGLQWQARRRLKNLDL-HNVSTRHGDGWQ-GWQARAPFDAIIVTAAPPE--IPTALMTQL 164
Query: 198 VEGGRFCSFSPCIEQVQRTCQ 218
EGG Q + +
Sbjct: 165 DEGGILVLPVGEEHQYLKRVR 185
>5X7F-A nrPDB
Length = 235
Score = 44.8 bits (104), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 48/134 (35%), Gaps = 9/134 (6%)
Query: 81 PHRTQI----LYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEF 136
T I + AL+ ++ +L G V E GTG+G ++ + G L T++
Sbjct: 52 ERATDIGAGAVTPAVGALLCLLAKLSGGKAVAEVGTGAGVSGLWLLSGMRDDGVLTTIDI 111
Query: 137 HQQRAEKAREEFQEHRVGRWVTVRTQDVCRSGFG--VSHVADAVFLDIPSPWEAVGHAWD 194
+ AR+ F E +G T + D VF+D P + + +
Sbjct: 112 EPEHLRLARQAFAEAGIGPSRTRLISGRAQEVLTRLADASYDLVFIDA-DPIDQPDYVAE 170
Query: 195 --ALKVEGGRFCSF 206
L GG
Sbjct: 171 GVRLLRSGGVIVVH 184
>1VBF-A nrPDB
Length = 231
Score = 44.4 bits (103), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 52/146 (35%), Gaps = 11/146 (7%)
Query: 94 LITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEHRV 153
+ L+L G V E GTG G + I + + +VE +++ A + +
Sbjct: 61 FMLDELDLHKGQKVLEIGTGIGYYTALIAEIVD---KVVSVEINEKMYNYASKLLSYY-- 115
Query: 154 GRWVTVRTQDVCRSGFGVSHVADAVFLDIPSPWEAVGHAWDALKVEGGRFCSFSPCIEQV 213
+ + D G+ D V + +P + ++ LK G + +V
Sbjct: 116 -NNIKLILGDGTL-GYEEEKPYDRVVVWATAP-TLLCKPYEQLKEGG--IMILPIGVGRV 170
Query: 214 QRTCQALAARGFSELSTL-EVLPQVY 238
Q+ + + L L EV+
Sbjct: 171 QKLYKVIKKGNSPSLENLGEVMFGRI 196
>4L7V-A nrPDB
Length = 225
Score = 44.4 bits (103), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 45/103 (43%), Gaps = 5/103 (4%)
Query: 78 LNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFH 137
L + I +A +T +L L P + V E GTGSG + + + + H+ TVE
Sbjct: 67 LPIGQGQTISQPYIVAKMTELLALTPETKVLEIGTGSGYQTAVLAKLVN---HVFTVERI 123
Query: 138 QQRAEKAREEFQEHRVGRWVTVRTQDVCRSGFGVSHVADAVFL 180
+ A+ ++ + V+ + D + G+ DA+ +
Sbjct: 124 KTLQWDAKRRLKQLDI-YNVSTKHGDGWQ-GWPARGPFDAILV 164
>3BUS-A nrPDB
Length = 273
Score = 43.7 bits (101), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/225 (15%), Positives = 62/225 (27%), Gaps = 35/225 (15%)
Query: 95 ITMMLELRPGSVVCESGTGSG--SVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEHR 152
+ +L++R G V + G G G +V A R + + + + + +A
Sbjct: 53 MIALLDVRSGDRVLDVGCGIGKPAVRLATARDV----RVTGISISRPQVNQANARATAAG 108
Query: 153 VGRWVTVRTQDVCRSGFGVSHVADAVFLD----IPSPWEAVGHAWDALKVEGGR----FC 204
+ VT D F + L+ +P A+ L+ G F
Sbjct: 109 LANRVTFSYADAMDLPFEDASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADFV 168
Query: 205 SFSPCIEQVQRTCQALAARG----FSELSTLEVLPQVYNVRTVSL--------PPPDLGT 252
+P + A A G + E + + S P
Sbjct: 169 LLAPVEGAKKEAVDAFRAGGGVLSLGGIDEYESDVRQAELVVTSTVDISAQARPSLVKTA 228
Query: 253 GTDGPAGSDTSPFRSGTPMKEAVG---------HTGYLTFATKTP 288
A S PF + + GY+ + P
Sbjct: 229 EAFENARSQVEPFMGAEGLDRMIATFRGLAEVPEAGYVLIGARKP 273
>3BKX-A nrPDB
Length = 275
Score = 43.7 bits (101), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 32/95 (33%), Gaps = 8/95 (8%)
Query: 94 LITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRA------EKAREE 147
I +++PG + E G G G +S + + +GH+ ++ +A
Sbjct: 34 AIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNH 93
Query: 148 FQEHRVGRWVT--VRTQDVCRSGFGVSHVADAVFL 180
+G +T T G D V L
Sbjct: 94 LLAGPLGDRLTVHFNTNLSDDLGPIADQHFDRVVL 128
>5N5D-A nrPDB
Length = 226
Score = 43.3 bits (100), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 41/103 (39%), Gaps = 4/103 (3%)
Query: 87 LYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKARE 146
+ + L+ ++ LR + E GT G S + R + P G L T+E+ + AE A
Sbjct: 45 VSAPQGKLLHLLARLRQARRILEIGTFGGYSSIWLARALPPDGRLVTIEWERSFAESAAS 104
Query: 147 EFQEHRV---GRWVTVRTQDVCRS-GFGVSHVADAVFLDIPSP 185
E V R D+ + + D VF+D P
Sbjct: 105 RLAEAGVAHLVEQHVGRALDILPTLDRPGTAPFDMVFVDANKP 147
>1YUB-A nrPDB
Length = 245
Score = 43.3 bits (100), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 35/93 (37%), Gaps = 6/93 (6%)
Query: 86 ILYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAR 145
+ + I L L+ V E GTG G ++ + + + + ++E +
Sbjct: 12 LTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKI---SKQVTSIELDSHLFNLSS 68
Query: 146 EEFQEHRVGRWVTVRTQDVCRSGFGVSHVADAV 178
E+ + + VT+ QD+ + F V
Sbjct: 69 EKLK---LNTRVTLIHQDILQFQFPNKQRYKIV 98
>3CCF-A nrPDB
Length = 279
Score = 42.5 bits (98), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/142 (19%), Positives = 48/142 (33%), Gaps = 13/142 (9%)
Query: 95 ITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQ--EHR 152
+ +L +PG + + G G+G ++ I + + + EKAR+ +
Sbjct: 49 LLQLLNPQPGEFILDLGCGTGQLTEKIAQ---SGAEVLGTDNAATMIEKARQNYPHLHFD 105
Query: 153 VGRWVTVRTQDVCRSGFGVSHVADAVFLDIPSPWEAVGHAWDALKVEGGRFCSF--SPCI 210
V R + F ++A+ + P A+ ALK G F I
Sbjct: 106 VADARNFRVDKPLDAVF-----SNAMLHWVKEPEAAIASIHQALKSGGRFVAEFGGKGNI 160
Query: 211 EQVQRTC-QALAARGFSELSTL 231
+ + AL G L
Sbjct: 161 KYILEALYNALETLGIHNPQAL 182
>1NKV-A nrPDB
Length = 256
Score = 42.5 bits (98), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 52/143 (36%), Gaps = 12/143 (8%)
Query: 99 LELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEHRVGRWVT 158
L ++PG+ + + G+GSG + R TG ++ +A+ +E V V
Sbjct: 32 LRMKPGTRILDLGSGSGEMLCTWARDHGITGT--GIDMSSLFTAQAKRRAEELGVSERVH 89
Query: 159 VRTQDVCRSGFGVSHVADAVFLDIPSPW------EAVGHAWDALKVEGGRFCSFSPCIEQ 212
D +G+ + D + + W A +LK GG P Q
Sbjct: 90 FIHNDA--AGYVANEKCDVAAC-VGATWIAGGFAGAEELLAQSLK-PGGIMLIGEPYWRQ 145
Query: 213 VQRTCQALAARGFSELSTLEVLP 235
+ T + A G S S LP
Sbjct: 146 LPATEEIAQACGVSSTSDFLTLP 168
>5EKU-A nrPDB
Length = 390
Score = 41.0 bits (94), Expect = 6e-04, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
Query: 94 LITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEHRV 153
+ + P + V E G GSG +S + + VE ++ A+ ARE + + +
Sbjct: 86 YEVLKKHVTPETGVLEIGAGSGLLSLMAAKL--GAKWVVAVEGSEELAKLARENIRANNM 143
Query: 154 GRWVTVRT 161
V V
Sbjct: 144 EHQVKVLH 151
>4M36-A nrPDB
Length = 343
Score = 41.0 bits (94), Expect = 6e-04, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
Query: 94 LITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEHRV 153
+ + P + V E G GSG +S + + VE ++ A+ ARE + + +
Sbjct: 51 YEVLKKHVTPETGVLEIGAGSGLLSLMAAKL--GAKWVVAVEGSEELAKLARENIRANNM 108
Query: 154 GRWVTVRT 161
V V
Sbjct: 109 EHQVKVLH 116
>3E05-A nrPDB
Length = 204
Score = 40.6 bits (93), Expect = 7e-04, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 53/137 (38%), Gaps = 10/137 (7%)
Query: 93 ALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEHR 152
A+ L L+ V+ + G GS SVS + P G + +E + Q R+ ++
Sbjct: 30 AVTLSKLRLQDDLVMWDIGAGSASVSIE-ASNLMPNGRIFALERNPQYLGFIRDNLKKF- 87
Query: 153 VGRWVTVRTQDVCRSGFGVSHVADAVFL----DIPSPWEAVGHAWDALKVEGGRFCSFSP 208
V R VT+ + G D VF+ + E + LK EG +
Sbjct: 88 VARNVTL-VEAFAPEGLDDLPDPDRVFIGGSGGMLE--EIIDAVDRRLKSEG-VIVLNAV 143
Query: 209 CIEQVQRTCQALAARGF 225
++ + + + L G+
Sbjct: 144 TLDTLTKAVEFLEDHGY 160
>3EEY-A nrPDB
Length = 197
Score = 40.6 bits (93), Expect = 8e-04, Method: Composition-based stats.
Identities = 7/63 (11%), Positives = 25/63 (39%)
Query: 98 MLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEHRVGRWV 157
+ ++ G V ++ G+G+ + + + G + + + ++ + + V
Sbjct: 17 KMFVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRV 76
Query: 158 TVR 160
T+
Sbjct: 77 TLI 79
>1UWV-A nrPDB
Length = 433
Score = 40.2 bits (92), Expect = 0.001, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 52/131 (39%), Gaps = 8/131 (6%)
Query: 99 LELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEHRVGRWVT 158
L+++P V + G G+ + + A + VE EK ++ + + + + VT
Sbjct: 282 LDVQPEDRVLDLFCGMGNFTLPLATQAAS---VVGVEGVPALVEKGQQNARLNGL-QNVT 337
Query: 159 VRTQDVCRSGFG---VSHVADAVFLDIPSPWEAVGHAWDALKVEGGRFCSFSPCIEQVQR 215
+++ + D V LD P+ A G +K+E R S + R
Sbjct: 338 FYHENLEEDVTKQPWAKNGFDKVLLD-PARAGAAGVMQQIIKLEPIRIVYVSCNPATLAR 396
Query: 216 TCQALAARGFS 226
+AL G++
Sbjct: 397 DSEALLKAGYT 407
>3M6U-A nrPDB
Length = 464
Score = 39.8 bits (91), Expect = 0.001, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 30/97 (30%), Gaps = 2/97 (2%)
Query: 87 LYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKARE 146
+ + ++L+ +PG V + G + + + G L E +R E
Sbjct: 85 IQEPSAQAVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLE 144
Query: 147 EFQEHRVGRWVTVRTQDVCRSGFGVSHVADAVFLDIP 183
+ VT FG V LD P
Sbjct: 145 NVERWGAPLAVTQAPPRALAEAFGTY--FHRVLLDAP 179
>3TMA-A nrPDB
Length = 354
Score = 39.8 bits (91), Expect = 0.001, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 28/59 (47%)
Query: 89 STDIALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREE 147
+ + + RPG V + TGSG+++ T+ PT ++ + ++R ARE
Sbjct: 189 PVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREA 247
>2IPX-A nrPDB
Length = 233
Score = 39.8 bits (91), Expect = 0.001, Method: Composition-based stats.
Identities = 27/160 (16%), Positives = 53/160 (33%), Gaps = 4/160 (2%)
Query: 101 LRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEHRVGRWVTVR 160
++PG+ V G SG+ + + P G ++ VEF R+ + + R +
Sbjct: 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSH-RSGRDLINLAKKRTNIIPVIE 133
Query: 161 TQDVCRSGFGVSHVADAVFLDIPSPWE---AVGHAWDALKVEGGRFCSFSPCIEQVQRTC 217
+ + D +F D+ P + +A L+ G S +
Sbjct: 134 DARHPHKYRMLIAMVDVIFADVAQPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASA 193
Query: 218 QALAARGFSELSTLEVLPQVYNVRTVSLPPPDLGTGTDGP 257
+A+ A ++ + PQ + G P
Sbjct: 194 EAVFASEVKKMQQENMKPQEQLTLEPYERDHAVVVGVYRP 233
>1R18-A nrPDB
Length = 227
Score = 39.8 bits (91), Expect = 0.001, Method: Composition-based stats.
Identities = 15/93 (16%), Positives = 37/93 (39%), Gaps = 8/93 (8%)
Query: 101 LRPGSVVCESGTGSGSVSHAIIRTIAPTG-----HLHTVEFHQQRAEKAREEFQEHR--- 152
L+PG+ + + G+GSG ++ R I G + +E + +++
Sbjct: 82 LKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSM 141
Query: 153 VGRWVTVRTQDVCRSGFGVSHVADAVFLDIPSP 185
+ + + R G+ + +A+ + +P
Sbjct: 142 LDSGQLLIVEGDGRKGYPPNAPYNAIHVGAAAP 174
>2PBF-A nrPDB
Length = 227
Score = 39.1 bits (89), Expect = 0.002, Method: Composition-based stats.
Identities = 21/144 (14%), Positives = 49/144 (34%), Gaps = 17/144 (11%)
Query: 39 RHGVLRHSVDLIGRPFGSKVTCGRGGWVYVLHPTPELWTLNLPHRTQILYSTDIALITMM 98
R G++ D+ + + + RG Y+ + + H I AL
Sbjct: 21 RRGIID-DDDV----YNTMLQVDRGK--YIKEIPYIDTPVYISHGVTISAPHMHALSLKR 73
Query: 99 L--ELRPGSVVCESGTGSGSVSHAIIRTI----APTGHLHTVEFHQQRAEKAREEFQEHR 152
L L+PGS + G+GSG ++ + + ++ +E + + E + +
Sbjct: 74 LINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDK 133
Query: 153 VG----RWVTVRTQDVCRSGFGVS 172
+ +++ +
Sbjct: 134 PELLKIDNFKIIHKNIYQVNEEEK 157
>3DLC-A nrPDB
Length = 219
Score = 39.1 bits (89), Expect = 0.003, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 27/80 (33%), Gaps = 3/80 (3%)
Query: 85 QILYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKA 144
+Y I + G + G+G G++S A+ + + H E A
Sbjct: 26 APIYPIIAENIINRFGITAG-TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMN--EIA 82
Query: 145 REEFQEHRVGRWVTVRTQDV 164
+ + + + + DV
Sbjct: 83 LKNIADANLNDRIQIVQGDV 102
>5BXY-A nrPDB
Length = 158
Score = 38.7 bits (88), Expect = 0.003, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Query: 95 ITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEHRVG 154
+ + ++ V+ + G+G G + RT G +E +KAR+ +E V
Sbjct: 16 MLELADVDETDVLYDLGSGDGRIVIRAARTHGARG--VGIEIDPDLVKKARKNAKEAGVA 73
Query: 155 RWVTVRTQDVCRSGFGVSHV 174
V R D+ + + V
Sbjct: 74 DLVEFRQGDLFEADISEATV 93
>3R3H-A nrPDB
Length = 242
Score = 38.7 bits (88), Expect = 0.003, Method: Composition-based stats.
Identities = 21/117 (17%), Positives = 42/117 (35%), Gaps = 6/117 (5%)
Query: 87 LYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKA-- 144
+ + M++ L V E GT +G + A+ + G + T + ++ + A
Sbjct: 44 VAPEQAQFMQMLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHP 103
Query: 145 -REEFQEHRVGRWVTVRTQDV--CRSGFGVSHVADAVFLDIPSPWEAVGHAWDALKV 198
E ++ + D G H D +F+D + + ALK+
Sbjct: 104 YWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDFIFIDA-DKTNYLNYYELALKL 159
>6EC3-A nrPDB
Length = 471
Score = 38.3 bits (87), Expect = 0.004, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 36/100 (36%), Gaps = 9/100 (9%)
Query: 102 RPGS-VVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEHRVGRWVTVR 160
PG+ + E G G+ + A+ R + + +E ++ +A + H V +R
Sbjct: 73 FPGATRILELGALEGADTLALARQPGTS--ILGLEGREENLRRAEFVMEVHG-ATNVELR 129
Query: 161 TQDVCRSGFGVSHVADAVFL-----DIPSPWEAVGHAWDA 195
DV F DAV + PW + A
Sbjct: 130 IADVETLDFATLGRFDAVLCAGLLYHVREPWALLKDAARV 169
>5LOG-A nrPDB
Length = 233
Score = 38.3 bits (87), Expect = 0.004, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 39/114 (34%), Gaps = 5/114 (4%)
Query: 73 PELWTLNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLH 132
T LP RT + L+++++ L E G +G + + G +
Sbjct: 29 LREETSKLPLRTMQIPPEQGQLLSLLVRLIGARKTLEVGVFTGYSTLCTALALPADGRVI 88
Query: 133 TVEFHQQRAEKAREEFQEHRVGRWVTVRTQDVCRS-----GFGVSHVADAVFLD 181
+ ++ AR +Q V + VR D S G D F+D
Sbjct: 89 ACDLSEEWVSIARRYWQRAGVADRIEVRLGDAHHSLEALVGSEHRGTFDLAFID 142
>6BQC-A nrPDB
Length = 383
Score = 38.3 bits (87), Expect = 0.004, Method: Composition-based stats.
Identities = 23/115 (20%), Positives = 38/115 (33%), Gaps = 13/115 (11%)
Query: 94 LITMMLELRPGSVVCESGTGSGSVSHAII--RTIAPTGHLHTVEFHQQRAEKAREEFQEH 151
+I L+L+PG V + G G G ++H + ++ G + E + E+
Sbjct: 159 MICEKLQLKPGMRVLDIGCGWGGLAHYMASNYDVSVVGVTISAEQQKMAQERCE------ 212
Query: 152 RVGRWVTVRTQDVCRSGFGVSHVADAVFLDIPSPWE---AVGHAWDALKVEGGRF 203
G VT+ QD + + P LK EG
Sbjct: 213 --GLDVTILLQDYRDLNDQFDRIVSVGMFEHVGPKNYDTYFAVVDRNLKPEGIFL 265
>3HM2-A nrPDB
Length = 178
Score = 37.9 bits (86), Expect = 0.006, Method: Composition-based stats.
Identities = 34/157 (21%), Positives = 64/157 (40%), Gaps = 7/157 (4%)
Query: 93 ALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEHR 152
AL L +P + + G GSGS++ +R+ P E ++R E+
Sbjct: 15 ALAISALAPKPHETLWDIGGGSGSIAIEWLRST-PQTTAVCFEISEERRERILSNAINLG 73
Query: 153 VGRWVTVRTQDVCRSGFGVSHVADAVFL--DIPSPWEAVGHAWDALKVEGGRFCSFSPCI 210
V + V+ Q R+ V D +F+ + +P AW L V GGR + + +
Sbjct: 74 VSDRIAVQ-QGAPRAFDDVPDNPDVIFIGGGLTAP-GVFAAAWKRLPV-GGRLVANAVTV 130
Query: 211 EQVQRTCQALAARGFSELSTLEVLPQVYNVRTVSLPP 247
E ++ AL + +S+ + + +++ P
Sbjct: 131 E-SEQMLWALRKQFGGTISSFAISHEHTVGSFITMKP 166
>2PXX-A nrPDB
Length = 215
Score = 37.5 bits (85), Expect = 0.006, Method: Composition-based stats.
Identities = 28/150 (18%), Positives = 51/150 (34%), Gaps = 17/150 (11%)
Query: 92 IALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEH 151
+ ELRP + G G+ ++S+ + + ++ +V++ + +
Sbjct: 31 SFRALLEPELRPEDRILVLGCGNSALSYELF--LGGFPNVTSVDYSSVVVAAMQACYAHV 88
Query: 152 RVGRWVTVRTQ--DVCRSGFG---VSHVADAVFLDIPSPW-------EAVGHA---WDAL 196
RW T+ + D + F DA+ PW V +
Sbjct: 89 PQLRWETMDVRKLDFPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRV 148
Query: 197 KVEGGRFCSFSPCIEQVQRTCQALAARGFS 226
V GGRF S + + A A G+S
Sbjct: 149 LVPGGRFISMTSAAPHFRTRHYAQAYYGWS 178
>2HNK-A nrPDB
Length = 239
Score = 37.1 bits (84), Expect = 0.009, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 31/75 (41%)
Query: 87 LYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKARE 146
+ + + ++ ++ + E GT +G S + G + + ++ AR+
Sbjct: 44 ISPEEGQFLNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARK 103
Query: 147 EFQEHRVGRWVTVRT 161
++E+ + + ++
Sbjct: 104 YWKENGLENKIFLKL 118
>2AS0-A nrPDB
Length = 396
Score = 36.7 bits (83), Expect = 0.011, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 49/138 (35%), Gaps = 6/138 (4%)
Query: 51 GRPFGSKVTCGRGGWVYVLHPTPELWTLNLP-HRTQILYSTDIALITMMLELRPGSVVCE 109
G P +V G+ + ++ + +++ +T + + ++PG V +
Sbjct: 164 GLPEIERVLLGKEKYRTIIQEGRAKFIVDMRGQKTGFFLDQRENRLALEKWVQPGDRVLD 223
Query: 110 SGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEHRVGRWVTVRTQDVCRSGF 169
T +G AI IA + ++ + E A+E + + V +
Sbjct: 224 VFTYTGGF--AIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEME 281
Query: 170 GV---SHVADAVFLDIPS 184
+ D V LD P+
Sbjct: 282 KLQKKGEKFDIVVLDPPA 299
>4INE-A nrPDB
Length = 454
Score = 36.7 bits (83), Expect = 0.011, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 40/123 (32%), Gaps = 9/123 (7%)
Query: 88 YSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREE 147
Y ++ +I + +PG + + G G G + + H+H ++ A E
Sbjct: 226 YDENLKIIKRFGDFKPGQTMLDIGVGIGGGARQVADEFGV--HVHGIDLSSNMLAIALER 283
Query: 148 FQEHRVGRWVTVRTQDVCRSGFGVSHVADAVFL-----DIPSPWEAVGHAWDALKVEGGR 202
E V D F + D VF IP + + ALK G
Sbjct: 284 LHE-EKDSRVKYSITDALVYQF-EDNSFDYVFSRDCIQHIPDTEKLFSRIYKALKPGGKV 341
Query: 203 FCS 205
+
Sbjct: 342 LIT 344
>4OA5-A nrPDB
Length = 227
Score = 36.7 bits (83), Expect = 0.012, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 30/77 (38%), Gaps = 2/77 (2%)
Query: 107 VCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEHRVGRWVTVRTQD--V 164
+ E GT G + + + GH++T+E + A + ++ +TV +
Sbjct: 69 IVEVGTCVGFSAICMAHALPSKGHIYTIEKDYENVVTANQNIVNCKLEDKITVLHGEALA 128
Query: 165 CRSGFGVSHVADAVFLD 181
+ D +F+D
Sbjct: 129 QLNTLKEMAPFDMIFID 145
>4DF3-A nrPDB
Length = 233
Score = 36.4 bits (82), Expect = 0.014, Method: Composition-based stats.
Identities = 17/98 (17%), Positives = 34/98 (34%), Gaps = 11/98 (11%)
Query: 96 TMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEHRVGR 155
+ L ++ G + G SG+ + + I P G ++ VE A + + R
Sbjct: 70 LIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVE----FAPRVMRDLLTVVRDR 125
Query: 156 WVTVRTQDVCRSGFGVS-----HVADAVFLDIPSPWEA 188
+ + F D ++ D+ P +A
Sbjct: 126 RNIFPI--LGDARFPEKYRHLVEGVDGLYADVAQPEQA 161
>5WYK-3B nrPDB
Length = 327
Score = 36.4 bits (82), Expect = 0.015, Method: Composition-based stats.
Identities = 38/181 (20%), Positives = 62/181 (34%), Gaps = 24/181 (13%)
Query: 71 PTPELWTLNLPHRTQILYSTDIALITMMLE---LRPGSVVCESGTGSGSVSHAIIRTIAP 127
PT + + P R+++ A I L+ + PG V G SG+ + + P
Sbjct: 136 PTKVEYRVWNPFRSKL-----AAGIMGGLDELFIAPGKKVLYLGAASGTSVSHVSDVVGP 190
Query: 128 TGHLHTVEFHQQRAEKAREEFQEHRVGRWV--TVRTQDVCRSGFGVSHVADAVFLDIPSP 185
G ++ VEF + + ++ + R R G + D VF D+ P
Sbjct: 191 EGVVYAVEFSHRPGRELISMAKKRPNIIPIIEDARHPQKYRMLIG---MVDCVFADVAQP 247
Query: 186 WEA---VGHAWDALKVEGGRFCSFSPCI--------EQVQRTCQALAARGFSELSTLEVL 234
+A ++ LK +GG S R Q L L L +
Sbjct: 248 DQARIIALNSHMFLKDQGGVVISIKANCIDSTVDAETVFAREVQKLREERIKPLEQLTLE 307
Query: 235 P 235
P
Sbjct: 308 P 308
>3C3P-A nrPDB
Length = 210
Score = 36.4 bits (82), Expect = 0.016, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 47/130 (36%), Gaps = 6/130 (4%)
Query: 57 KVTCGRGGWVYVLHPTPELWTLNLP-----HRTQILYSTDIALITMMLELRPGSVVCESG 111
V G ++ L P + + I+ L+ ++ ++ +V G
Sbjct: 5 IVDSRIGAYLDGLLPEADPVVAAMEQIARERNIPIVDRQTGRLLYLLARIKQPQLVVVPG 64
Query: 112 TGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEHRVGRWVTVRTQDVCRSGFGV 171
G G S R I+ + + ++ + E AR ++ + V ++ D G
Sbjct: 65 DGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQ 124
Query: 172 SHVADAVFLD 181
+ D +F+D
Sbjct: 125 RDI-DILFMD 133
>5EVJ-A nrPDB
Length = 387
Score = 36.4 bits (82), Expect = 0.017, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 38/111 (34%), Gaps = 13/111 (11%)
Query: 103 PGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEHRVGR------- 155
G V + G GSG ++ + + G + V+ + E A + +
Sbjct: 83 EGLRVLDLGAGSGRDAYVAAKLVGEKGSVTGVDMTPAQLEVAISHADAYARDKLGYGKSN 142
Query: 156 --WVTVRTQDVCRSGFGVSH----VADAVFLDIPSPWEAVGHAWDALKVEG 200
++ + + R+G S +++ V P + A+ L G
Sbjct: 143 MTFIQGEIEYLDRAGLEDSSFDLVISNCVINLSPDKARVLSEAYRVLAPGG 193
>3M4X-A nrPDB
Length = 456
Score = 36.4 bits (82), Expect = 0.017, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 29/93 (31%), Gaps = 2/93 (2%)
Query: 92 IALIT-MMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQE 150
A+I +PG V + G S + + G L T E +RA+ E +
Sbjct: 93 SAMIVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIER 152
Query: 151 HRVGRWVTVRTQDVCRSGFGVSHVADAVFLDIP 183
V + D + +D P
Sbjct: 153 WGVSNAIVTNHAPAELVPHFSG-FFDRIVVDAP 184
>5OQL-R nrPDB
Length = 313
Score = 36.0 bits (81), Expect = 0.018, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 34/85 (40%), Gaps = 1/85 (1%)
Query: 101 LRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEHRVGRWVTVR 160
++PGS V G SG+ + + PTG ++ VEF R+ + R V
Sbjct: 150 MKPGSKVLYLGAASGTSVSHVADIVGPTGAVYAVEFSH-RSGRDLINMATRRTNVIPIVE 208
Query: 161 TQDVCRSGFGVSHVADAVFLDIPSP 185
+ + + D +F D+ P
Sbjct: 209 DARKPMAYRMLVPMVDVIFADVAQP 233
>3CBG-A nrPDB
Length = 232
Score = 36.0 bits (81), Expect = 0.021, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 33/86 (38%)
Query: 76 WTLNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVE 135
T +LP + + +++ L V E G G + A+ + P G + +
Sbjct: 45 ETAHLPGAPMQISPEQAQFLGLLISLTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACD 104
Query: 136 FHQQRAEKAREEFQEHRVGRWVTVRT 161
A++ +Q+ V +++R
Sbjct: 105 QDPNATAIAKKYWQKAGVAEKISLRL 130
>4KDR-A nrPDB
Length = 223
Score = 35.6 bits (80), Expect = 0.023, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 44/142 (30%), Gaps = 3/142 (2%)
Query: 87 LYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAP-TGHLHTVEFHQQRAEKAR 145
+ + I G V + G G G ++ ++ R A TG E Q A
Sbjct: 46 INPLRLGYIAERAGGLFGKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHAL 105
Query: 146 EEFQEHRVGRWVTVRTQDVCRSGFGVSHVADAVFLDIPSPWEAVGHAWDALKVEGGRFCS 205
E + + TV +G + +P P V +K G F
Sbjct: 106 ESGIQVDYVQE-TVEEHAAKHAGQYDVVTCMEMLEHVPDPQSVVRACAQLVKPGGDVF-F 163
Query: 206 FSPCIEQVQRTCQALAARGFSE 227
+ V++ + G+ +
Sbjct: 164 STLNRNGVKKFIKPAELLGWVD 185
>3VC2-A nrPDB
Length = 312
Score = 35.6 bits (80), Expect = 0.026, Method: Composition-based stats.
Identities = 25/201 (12%), Positives = 57/201 (28%), Gaps = 33/201 (16%)
Query: 33 GAQTQTRHGVLRHSVDLIGRPFGSKVTCGRGGWVYVLHPTPELWTLNLPHRTQILYSTDI 92
+G+ +G P S+ ++ L + ++
Sbjct: 64 DGLYHHHYGIGPVDRAALGDPEHSEYEKKVIAELHRLESAQAEFLMD------------- 110
Query: 93 ALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEHR 152
+ + P + ++G G G R + V +A+ +E R
Sbjct: 111 ----HLGQAGPDDTLVDAGCGRGGSMVMAHRRFGS--RVEGVTLSAAQADFGNRRARELR 164
Query: 153 VGRWVTVRTQDVCRSGFGVSHVA------DAVFLDIPSPWEAVGHAWDALKVEGGRFCSF 206
+ V R ++ + F V +++D+ + GGR+ +
Sbjct: 165 IDDHVRSRVCNMLDTPFDKGAVTASWNNESTMYVDLHD----LFSEHSRFLKVGGRYVTI 220
Query: 207 SPCIE----QVQRTCQALAAR 223
+ C Q + + A
Sbjct: 221 TGCWNPRYGQPSKWVSQINAH 241
>3R9X-B nrPDB
Length = 248
Score = 35.6 bits (80), Expect = 0.026, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 30/71 (42%), Gaps = 7/71 (9%)
Query: 95 ITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEHRVG 154
I L + G+ V E G G+G+++ +++ P L+ +E ++ E +
Sbjct: 22 IAEELNIEEGNTVVEVGGGTGNLTKVLLQ--HPLKKLYVIELDREM----VENLKSIG-D 74
Query: 155 RWVTVRTQDVC 165
+ V +D
Sbjct: 75 ERLEVINEDAS 85
>4PON-A nrPDB
Length = 200
Score = 35.2 bits (79), Expect = 0.032, Method: Composition-based stats.
Identities = 8/55 (14%), Positives = 22/55 (40%)
Query: 96 TMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQE 150
+ + G +V ++ G+G + + + GH++ + + +E E
Sbjct: 19 LLKMAAGEGDIVIDATMGNGHDTQFLAELVGENGHVYAFDIQESAVANTKERLGE 73
>1SQG-A nrPDB
Length = 429
Score = 35.2 bits (79), Expect = 0.034, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 43/121 (35%), Gaps = 8/121 (6%)
Query: 66 VYVLHPTPELWTLNLPHRTQILYSTDIALITMMLELRP--GSVVCESGTGSGSVSHAIIR 123
V + P P + D + M L P G + + G + I+
Sbjct: 209 VRLETPAPVHALPGFEDGWVTV--QDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHIL- 265
Query: 124 TIAPTGHLHTVEFHQQRAEKAREEFQEHRVGRWVTVRTQD-VCRSGFGVSHVADAVFLDI 182
+AP + V+ +QR + + + R+G TV+ D S + D + LD
Sbjct: 266 EVAPEAQVVAVDIDEQRLSRVYDNLK--RLGMKATVKQGDGRYPSQWCGEQQFDRILLDA 323
Query: 183 P 183
P
Sbjct: 324 P 324
>1QAM-A nrPDB
Length = 244
Score = 35.2 bits (79), Expect = 0.037, Method: Composition-based stats.
Identities = 18/106 (16%), Positives = 39/106 (36%), Gaps = 8/106 (7%)
Query: 79 NLPHRTQILYST-DIALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFH 137
N+ H + S +I I + L + E G+G G + + + + +E
Sbjct: 5 NIKHSQNFITSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLEL---VQRCNFVTAIEID 61
Query: 138 QQRAEKAREEFQEHRVGRWVTVRTQDVCRSGFGVSHVADAVFLDIP 183
+ + + +H V +D+ + F + +F +IP
Sbjct: 62 HKLCKTTENKLVDH---DNFQVLNKDILQFKFPKNQSY-KIFGNIP 103
>3EVZ-A nrPDB
Length = 230
Score = 34.4 bits (77), Expect = 0.061, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
Query: 75 LWTLNLPHRTQ-ILYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHT 133
L+ L++ + + ++ + I + LR G V E GTG ++ + +
Sbjct: 26 LFGLDIEYHPKGLVTTPISRYIFLKTFLRGGEVALEIGTGHTAMMALMAEKFFNC-KVTA 84
Query: 134 VEFHQQRAEKAREEFQE 150
E ++ E AR +
Sbjct: 85 TEVDEEFFEYARRNIER 101
>6IFX-A nrPDB
Length = 287
Score = 34.4 bits (77), Expect = 0.062, Method: Composition-based stats.
Identities = 31/204 (15%), Positives = 73/204 (35%), Gaps = 26/204 (12%)
Query: 73 PELWTLNLPHRTQILYSTDIAL---ITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTG 129
+ + + + D + I E+ + V E G G G+++ + +
Sbjct: 15 LKKYGFSFKKSLGQNFLIDTNILNRIVDHAEVTEKTGVIEIGPGIGALTEQLAK---RAK 71
Query: 130 HLHTVEFHQQRAEKAREEFQEHRVGRWVTVRTQDVCRSGF-----GVSHVADAVFLDIPS 184
+ E Q+ ++ + VTV QDV ++ D + +
Sbjct: 72 KVVAFEIDQRLLPILKDTLSPY---ENVTVIHQDVLKADVKSVIEEQFQDCDEIMVVANL 128
Query: 185 PWEA-----VGHAWDALKVEGGRFCSFSPCIEQVQRTCQALA--ARGFSELSTLEVLPQV 237
P+ + + L ++G E++ T ++L+ + ++E T+ ++P
Sbjct: 129 PYYVTTPIIMKLLEEHLPLKGIVVMLQKEVAERMANTKRSLSIAVQFYTEAKTVMIVP-- 186
Query: 238 YNVRTVSLPPPDLGTGTDGPAGSD 261
+TV +P P++ + D
Sbjct: 187 ---KTVFVPQPNVDSAVIRLILRD 207
>5YLN-A nrPDB
Length = 356
Score = 34.4 bits (77), Expect = 0.062, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 59/179 (32%), Gaps = 20/179 (11%)
Query: 10 IKEGDTAILSLGHGAMVAVRVQRGAQTQTRHGVLRHSVDLIGRPFGSKVTCGRGGWVYVL 69
K+GD ++S G + G+ H D G FG + + ++ V
Sbjct: 80 FKKGDKVLIS--------CVCACGKCYYCKKGIYAHCEDEGGWIFGHLIDGMQAEYLRVP 131
Query: 70 HP------TPELWTLNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIR 123
H TPE + + T + + ++ PG V G+G ++ +
Sbjct: 132 HADNTLYHTPEDLSDEALVMLSDILPTGYEIGVLKGKVEPGCSVAIIGSGPVGLAALLTA 191
Query: 124 TIAPTGHLHTVEFHQQRAEKAREEFQEHRVGRWVTVRTQDVCRSGFGVSHVADAVFLDI 182
L V+ R E A G V + D ++ + + D +D+
Sbjct: 192 QFYSPAKLIMVDLDDNRLETALS------FGATHKVNSSDPEKAIKEIYDLTDGRGVDV 244
>3NJR-A nrPDB
Length = 204
Score = 34.0 bits (76), Expect = 0.068, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 37/109 (33%), Gaps = 14/109 (12%)
Query: 80 LPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQ 139
H QI S AL L R G ++ + G GSGSVS G T+E
Sbjct: 32 FAHDGQITKSPMRALTLAALAPRRGELLWDIGGGSGSVSVEWCLA---GGRAITIEPRAD 88
Query: 140 RAEKAREEFQEHRVGRWVTVRTQDVCRSGFGVSHVADAVFLDIPSPWEA 188
R E ++ + + + V A A D+P P
Sbjct: 89 RIENIQKNIDTYGLSPRMR-----------AVQGTAPAALADLPLPEAV 126
>2VS1-A nrPDB
Length = 425
Score = 34.0 bits (76), Expect = 0.071, Method: Composition-based stats.
Identities = 24/149 (16%), Positives = 45/149 (30%), Gaps = 13/149 (8%)
Query: 63 GGWVYVLHPTPELWTLNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHAII 122
G + ++ Q + L+ + EL G + + +G G+ +
Sbjct: 250 GKEFIRERLDDVDYLIHPNSFFQTNSYQAVNLVRKVSELVEGEKILDMYSGVGTFGIYLA 309
Query: 123 -RTIAPTGHLHTVEFHQQRAEKAREEFQEHRVG-RWVTVRTQDVCRSGFGVSHVADAVFL 180
R G + ++ E AR + + V + ++V GF D V +
Sbjct: 310 KRGFNVKG----FDSNEFAIEMARRNVEINNVDAEFEVASDREVSVKGF------DTVIV 359
Query: 181 DIPSPWEAVGHAWDALKVEGGRFCSFSPC 209
D P L E + C
Sbjct: 360 DPPRAGLH-PRLVKRLNREKPGVIVYVSC 387
>2B3T-A nrPDB
Length = 276
Score = 34.0 bits (76), Expect = 0.071, Method: Composition-based stats.
Identities = 27/190 (14%), Positives = 56/190 (29%), Gaps = 16/190 (8%)
Query: 16 AILSLGHGAMVAVRVQRGAQTQTRHGVLRHSVDLIGRPFGSKVTCGRGGWVYVLHPTPEL 75
+L G + G T + L R G + G + P
Sbjct: 26 ILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLPLFVS 85
Query: 76 WTLNLPHRTQILYSTDIALITMMLELRPGS--VVCESGTGSGSVSHAIIRTIAPTGHLHT 133
+P L+ L P + + GTG+G+++ A+ P +
Sbjct: 86 PATLIPR------PDTECLVEQALARLPEQPCRILDLGTGTGAIALALASE-RPDCEIIA 138
Query: 134 VEFHQQRAEKAREEFQEHRVGRWVTVRTQDVCRSGFGVSHVADAVFLDIPSPWEAVGHAW 193
V+ A+ Q + ++ + +S + + + + +P +
Sbjct: 139 VDRMPDAVSLAQRNAQH------LAIKNIHILQSDWFSALAGQQFAMIVSNP-PYIDEQD 191
Query: 194 DALKVEGGRF 203
L+ RF
Sbjct: 192 PHLQQGDVRF 201
>3D2L-A nrPDB
Length = 243
Score = 33.7 bits (75), Expect = 0.097, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 55/156 (35%), Gaps = 29/156 (18%)
Query: 88 YSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREE 147
Y +A + +E PG + + G G+G+ + + TG + E + EKA E
Sbjct: 20 YPEWVAWVLEQVE--PGKRIADIGCGTGTATLLLADHYEVTGVDLSEEMLEIAQEKAMET 77
Query: 148 FQEHRVGRWVTVRTQDVCRSGFGVSHVADAVFLDIPSPWEAVGHAWDALKVEGGRFCSFS 207
R V QD+ L++P P +A+ D+L +
Sbjct: 78 ------NRHVDFWVQDMRE-------------LELPEPVDAITILCDSLN--------YL 110
Query: 208 PCIEQVQRTCQALAARGFSELSTLEVLPQVYNVRTV 243
V++T + A L + Y + T+
Sbjct: 111 QTEADVKQTFDSAARLLTDGGKLLFDVHSPYKMETL 146
>6IFV-A nrPDB
Length = 215
Score = 33.3 bits (74), Expect = 0.11, Method: Composition-based stats.
Identities = 24/152 (15%), Positives = 50/152 (32%), Gaps = 21/152 (13%)
Query: 73 PELWTLNLPHRTQILYSTDIAL---ITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTG 129
+ + + + D + I E+ + V E G G G+++ + +
Sbjct: 15 LKKYGFSFKKSLGQNFLIDTNILNRIVDHAEVTEKTGVIEIGPGIGALTEQLAK---RAK 71
Query: 130 HLHTVEFHQQRAEKAREEFQEHRVGRWVTVRTQDVCRSGFGVSHVADAVFLDIPSPWEAV 189
+ E Q+ ++ + VTV QDV ++ V V + F D
Sbjct: 72 KVVAFEIDQRLLPILKDTLSPY---ENVTVIHQDVLKA--DVKSVIEEQFQD-------- 118
Query: 190 GHAWDALKVEGGRFCSFSPCIEQVQRTCQALA 221
+ + V + +P I ++ L
Sbjct: 119 --CDEIMVVANLPYYVTTPIIMKLLEEHLPLK 148
>3R0Q-C nrPDB
Length = 376
Score = 33.3 bits (74), Expect = 0.12, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 26/71 (36%), Gaps = 3/71 (4%)
Query: 102 RPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEHRVGRWVTVRT 161
G V + GTGSG AI A ++ VE + A+ AR + + + V V
Sbjct: 62 FEGKTVLDVGTGSG--ILAIWSAQAGARKVYAVEATK-MADHARALVKANNLDHIVEVIE 118
Query: 162 QDVCRSGFGVS 172
V
Sbjct: 119 GSVEDISLPEK 129
>1ZQ9-A nrPDB
Length = 285
Score = 33.3 bits (74), Expect = 0.14, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 34/95 (35%), Gaps = 6/95 (6%)
Query: 89 STDIALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEF 148
I I LRP VV E G G+G+++ ++ + E + + +
Sbjct: 14 PLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLE---KAKKVVACELDPRLVAELHKRV 70
Query: 149 QEHRVGRWVTVRTQDVCRSGFGVSHVADAVFLDIP 183
Q V + V DV ++ D ++P
Sbjct: 71 QGTPVASKLQVLVGDVLKTDLP---FFDTCVANLP 102
>1EIZ-A nrPDB
Length = 180
Score = 32.5 bits (72), Expect = 0.20, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 35/120 (29%), Gaps = 22/120 (18%)
Query: 102 RPGSVVCESGTGSGSVSHAIIRTIAPTGHLHT-------------VEFHQQRAEKAREEF 148
+PG V + G G S ++ I G + R E +
Sbjct: 21 KPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDPIVGVDFLQGDFRDELVMKAL 80
Query: 149 QEHRVGRWVTVRTQDVCRSGFGVSHVADAVFLDIPSPWEAVGHAWDA---LKVEGGRFCS 205
E V V D+ +++ +DIP V A + + GG F
Sbjct: 81 LERVGDSKVQVVMSDMAP------NMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVV 134
>2NNW-B nrPDB
Length = 234
Score = 32.5 bits (72), Expect = 0.22, Method: Composition-based stats.
Identities = 30/160 (18%), Positives = 58/160 (36%), Gaps = 15/160 (9%)
Query: 101 LRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEHRVGRWVTVR 160
++PG V G SG+ + + + G ++ +EF + + +E R +
Sbjct: 78 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIYGIEFSPRVLRELVPIVEER---RNIIPI 134
Query: 161 TQDVCRSGFGVSHVA--DAVFLDIPSPWEA---VGHAWDALKVEG-------GRFCSFSP 208
D + + V D +F D+ P +A + +A LK G R +
Sbjct: 135 LGDATKPEEYRALVTKVDVIFEDVAQPTQAKILIDNAKAYLKRGGYGMIAVKSRSIDVTK 194
Query: 209 CIEQVQRTCQALAARGFSELSTLEVLPQVYNVRTVSLPPP 248
EQV + + + F + L + P + + P
Sbjct: 195 EPEQVFKEVERELSEYFEVIERLNLEPYEKDHALFVVRKP 234
>4FZV-A nrPDB
Length = 359
Score = 32.5 bits (72), Expect = 0.23, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 43/103 (41%), Gaps = 8/103 (7%)
Query: 88 YSTDIALI--TMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAR 145
Y D A + + L L+PG +V + G + A+++T +L + R + +
Sbjct: 131 YLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQT-GCCRNLAANDLSPSRIARLQ 189
Query: 146 EEF-----QEHRVGRWVTVRTQDVCRSGFGVSHVADAVFLDIP 183
+ +E R G V V + D + G D V +D+P
Sbjct: 190 KILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDRVLVDVP 232
>2YXD-A nrPDB
Length = 183
Score = 32.5 bits (72), Expect = 0.23, Method: Composition-based stats.
Identities = 13/100 (13%), Positives = 32/100 (32%), Gaps = 6/100 (6%)
Query: 81 PHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQR 140
I A+ L L VV + G GSG ++ I + ++ +++
Sbjct: 13 REGVPITKEEIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAKRCK---FVYAIDYLDGA 69
Query: 141 AEKAREEFQEHRVGRWVTVRTQDVCRSGFGVSHVADAVFL 180
E ++ + + ++ + + F+
Sbjct: 70 IEVTKQNLAKFNIKNCQIIKGR---AEDVLDKLEFNKAFI 106
>4KDC-A nrPDB
Length = 246
Score = 32.1 bits (71), Expect = 0.28, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 36/118 (30%), Gaps = 2/118 (1%)
Query: 87 LYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAP-TGHLHTVEFHQQRAEKAR 145
+ + I G V + G G G ++ ++ R A TG E Q A
Sbjct: 46 INPLRLGYIAERAGGLFGKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHAL 105
Query: 146 EEFQEHRVGRWVTVRTQDVCRSGFGVSHVADAVFLDIPSPWEAVGHAWDALKVEGGRF 203
E + + TV +G + +P P V +K G F
Sbjct: 106 ESGIQVDYVQE-TVEEHAAKHAGQYDVVTCMEMLEHVPDPQSVVRACAQLVKPGGDVF 162
>5WWT-A nrPDB
Length = 477
Score = 31.3 bits (69), Expect = 0.44, Method: Composition-based stats.
Identities = 16/103 (15%), Positives = 35/103 (33%), Gaps = 11/103 (10%)
Query: 92 IALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREE---- 147
AL++ +L +PG + + G + I + G + ++ + EK ++
Sbjct: 223 SALVSHVLNPQPGEKILDLCAAPGGKTTHIAALMHDQGEVIALDKIFNKVEKIKQNALLL 282
Query: 148 ----FQEHRVGRWVTVR---TQDVCRSGFGVSHVADAVFLDIP 183
+ V+ +D + D + LD P
Sbjct: 283 GLNSIRAFCFDGTKAVKLDMVEDTEGEPPFLPESFDRILLDAP 325
>3DMF-A nrPDB
Length = 381
Score = 31.3 bits (69), Expect = 0.45, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 48/136 (35%), Gaps = 13/136 (9%)
Query: 104 GSVVCESGTGSGSVSHAIIR----TIAPTGHLHTVEFHQQRAEKA--REEFQEHRVGRWV 157
G V + G G G+++ + R + L +V Q+ E + + V +
Sbjct: 234 GRQVLDLGAGYGALTLPLARMGAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEAL 293
Query: 158 TVRTQDVCRSGFGVSHVADAVFLDIPSPWEAVGHAWDALKVEGGRFCSFSPCIEQVQRTC 217
T + HV AV LD+ V A L+ G F +P ++
Sbjct: 294 TEEARFDIIVTNPPFHVGGAVILDVAQ--AFVNVAAARLRPGGVFFLVSNPFLK-----Y 346
Query: 218 QALAARGFSELSTLEV 233
+ L F TL+V
Sbjct: 347 EPLLEEKFGAFQTLKV 362
>4F86-A nrPDB
Length = 320
Score = 31.3 bits (69), Expect = 0.49, Method: Composition-based stats.
Identities = 26/200 (13%), Positives = 57/200 (28%), Gaps = 31/200 (15%)
Query: 33 GAQTQTRHGVLRHSVDLIGRPFGSKVTCGRGGWVYVLHPTPELWTLNLPHRTQILYSTDI 92
+G+ +G P ++ L + L+
Sbjct: 72 DGLYHHHYGIGAVDHAALGDPGDGGYEARLIAELHRLESAQAEFLLD------------- 118
Query: 93 ALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEHR 152
+ + PG + ++G G G + + V +AE +E
Sbjct: 119 ----HLGPVGPGDTLVDAGCGRGGSMVMAHQRFGCK--VEGVTLSAAQAEFGNRRARELG 172
Query: 153 VGRWVTVRTQDVCRSGFGVSHVA------DAVFLDIPSPWEAVGHAWDALKVEG---GRF 203
+ V R ++ + F VA ++++D+ + L+V G
Sbjct: 173 IDDHVRSRVCNMLDTPFEKGTVAASWNNESSMYVDL---HDVFAEHSRFLRVGGRYVTVT 229
Query: 204 CSFSPCIEQVQRTCQALAAR 223
++P Q + + A
Sbjct: 230 GCWNPRYGQPSKWVSQINAH 249
>4FS8-A nrPDB
Length = 383
Score = 31.0 bits (68), Expect = 0.55, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 22/49 (44%)
Query: 103 PGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEH 151
G+ V + G G+G + + + G + V+ + E AR+ + H
Sbjct: 83 EGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYH 131
>5WP5-A nrPDB
Length = 491
Score = 31.0 bits (68), Expect = 0.56, Method: Composition-based stats.
Identities = 24/153 (15%), Positives = 47/153 (30%), Gaps = 7/153 (4%)
Query: 103 PGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEHRVGRWV--TVR 160
G V E G G G + + + G + ++F + +K ++ +++ V
Sbjct: 53 EGKSVLELGAGIGRFTGELAQ---KAGEVIALDFIESAIQKNESVNGHYKNIKFMCADVT 109
Query: 161 TQDVCRSGFGVSHVADAVFLDIPSPWEAVGHAWDALK--VEGGRFCSFSPCIEQVQRTCQ 218
+ D+ + + L S E A + GG C Q + +
Sbjct: 110 SPDLKIKDGSIDLIFSNWLLMYLSDKEVELMAERMIGWVKPGGYIFFRESCFHQSGDSKR 169
Query: 219 ALAARGFSELSTLEVLPQVYNVRTVSLPPPDLG 251
+ E + Q R S +L
Sbjct: 170 KSNPTHYREPRFYTKVFQECQTRDASGNSFELS 202
>5FUB-A nrPDB
Length = 337
Score = 31.0 bits (68), Expect = 0.61, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 25/69 (36%), Gaps = 2/69 (2%)
Query: 104 GSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEHRVGRWVTVRTQD 163
VV + G G+G +S P G ++ VE AE E +++ VTV +
Sbjct: 45 EKVVLDLGCGTGVISLFCALLAKPAG-VYAVEA-SSMAEHTEELVKQNGCDGVVTVFQER 102
Query: 164 VCRSGFGVS 172
Sbjct: 103 AENLTLPTK 111
>3CJR-A nrPDB
Length = 254
Score = 30.6 bits (67), Expect = 0.88, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 46/129 (35%), Gaps = 6/129 (4%)
Query: 101 LRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEHRVGRWVTVR 160
LRPG V + GTGSG ++ A + G V+ +A + + V
Sbjct: 118 LRPGDKVLDLGTGSGVLAIA-AEKLG--GKALGVDIDPMVLPQAEANAKRNGVRPRFLEG 174
Query: 161 TQDVCRSGFGVSHVADAVFLDIPSPWEAVGHAWDALKVEGGRFCSFSPCIEQVQRTCQAL 220
+ + + ++ ++ A+ + V GGR ++ +A+
Sbjct: 175 SLEAALPFGPFDLLVANLYAEL---HAALAPRYREALVPGGRALLTGILKDRAPLVREAM 231
Query: 221 AARGFSELS 229
A GF L
Sbjct: 232 AGAGFRPLE 240
>4DZR-A nrPDB
Length = 215
Score = 30.2 bits (66), Expect = 0.96, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Query: 104 GSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEHR-VGRW 156
G+ V + GTGSG ++ +I P + V+ AR + V W
Sbjct: 31 GTRVIDVGTGSGCIAVSIALAC-PGVSVTAVDLSMDALAVARRNAERFGAVVDW 83
>3E23-A nrPDB
Length = 211
Score = 30.2 bits (66), Expect = 1.0, Method: Composition-based stats.
Identities = 28/143 (19%), Positives = 41/143 (28%), Gaps = 23/143 (16%)
Query: 75 LWTLNLPHRTQILY----STDIALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGH 130
TL Y L + EL G+ + E G G+G + G
Sbjct: 11 DDTLRFYRGNATAYAERQPRSATLTKFLGELPAGAKILELGCGAG----YQAEAMLAAG- 65
Query: 131 LHTVEFHQQRAEKAREEFQEHRVGRWVTVRTQDVCRSGFGVSHVADAV-----FLDIPSP 185
V+ E A E + + Q DAV L +P
Sbjct: 66 -FDVDATDGSPELAAEASRRLGRPVRTMLFHQ------LDAIDAYDAVWAHACLLHVPRD 118
Query: 186 W--EAVGHAWDALKVEGGRFCSF 206
+ + W ALK G + S+
Sbjct: 119 ELADVLKLIWRALKPGGLFYASY 141
>6H1E-A nrPDB
Length = 208
Score = 29.8 bits (65), Expect = 1.3, Method: Composition-based stats.
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 108 CESGTGSGSVSHAIIRTIAPT 128
E G+GSG VS + I P
Sbjct: 44 LEVGSGSGVVSAFLASMIGPQ 64
>4JJI-A nrPDB
Length = 378
Score = 29.8 bits (65), Expect = 1.5, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 28/78 (35%), Gaps = 4/78 (5%)
Query: 101 LRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEHRVGRWVTVR 160
+ PGS V G G+ ++ A A + ++ ++ E A ++ V +V +
Sbjct: 191 VEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETA----KKFGVNEFVNPK 246
Query: 161 TQDVCRSGFGVSHVADAV 178
D V V
Sbjct: 247 DHDKPIQEVIVDLTDGGV 264
>1TPY-A nrPDB
Length = 287
Score = 29.0 bits (63), Expect = 2.1, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 35/103 (33%), Gaps = 9/103 (8%)
Query: 64 GWVYVLHPTPELWTLNLPHRTQILYSTDIALI---TMMLELRPGSVVCESGTGSGS-VSH 119
+ L PT + L IA I L L+PG + + G G G+ +
Sbjct: 22 FFRLFLDPTQTYSCAHFEREDMTLEEAQIAKIDLALGKLGLQPGMTLLDIGCGWGATMRR 81
Query: 120 AII-RTIAPTGHLHTVEFHQQRAEKAREEFQEHRVGRWVTVRT 161
AI + G + + +A ++ F E R V
Sbjct: 82 AIAQYDVNVVGLTLS----KNQAAHVQKSFDEMDTPRDRRVLL 120
>1VQ1-A nrPDB
Length = 294
Score = 29.0 bits (63), Expect = 2.6, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Query: 105 SVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEHRVGRWVTVRTQDV 164
V + GTGSG++ ++ + + + + E AR+ + H V VR +
Sbjct: 135 KTVADIGTGSGAIGVSVAKF--SDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEF 192
>3W53-A nrPDB
Length = 506
Score = 28.7 bits (62), Expect = 3.3, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 36/98 (36%), Gaps = 3/98 (3%)
Query: 189 VGHAWDALKVEGGRFCSFSPCIEQVQRTCQALAARGFSELSTLEVLPQVYNVRTVSLPPP 248
V W+ + ++ S+ E + Q L E LE++ Q + V+
Sbjct: 280 VDALWNRMYLDPVLRGSYP---EDLLEDVQGLGLAEVIEAGDLEIISQPIDFLGVNHYHD 336
Query: 249 DLGTGTDGPAGSDTSPFRSGTPMKEAVGHTGYLTFATK 286
D +G PAG + +P + Y+TF +
Sbjct: 337 DNVSGHPLPAGQPQPVVPTDSPKSSPFVGSEYVTFPAR 374
>1F8F-A nrPDB
Length = 371
Score = 28.7 bits (62), Expect = 3.3, Method: Composition-based stats.
Identities = 10/55 (18%), Positives = 21/55 (38%)
Query: 92 IALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKARE 146
L++ P S G G+ +S + + + V+ + R E A++
Sbjct: 179 AGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQ 233
>5TNX-A nrPDB
Length = 383
Score = 28.3 bits (61), Expect = 4.0, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 28/86 (32%), Gaps = 11/86 (12%)
Query: 92 IALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKARE----- 146
+ L +R GS G G+ +S + IA + V+ R A E
Sbjct: 190 AGAVINSLAVRTGSSFASFGAGAVGMSAVMAARIAGATTIIAVDIVPSRLALALELGATH 249
Query: 147 --EFQEHRVGRWVTVRTQDVCRSGFG 170
+E V + +++ G
Sbjct: 250 AINSKEVDVVDAI----REITGGGVD 271
Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
Posted date: Jan 3, 2023 9:05 PM
Number of letters in database: 10,336,785
Number of sequences in database: 36,641
Lambda K H
0.309 0.120 0.293
Lambda K H
0.267 0.0367 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,786,733
Number of Sequences: 36641
Number of extensions: 363166
Number of successful extensions: 1179
Number of sequences better than 10.0: 96
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 1039
Number of HSP's gapped (non-prelim): 131
length of query: 289
length of database: 10,336,785
effective HSP length: 96
effective length of query: 193
effective length of database: 6,819,249
effective search space: 1316115057
effective search space used: 1316115057
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.4 bits)
S2: 58 (27.1 bits)