BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q96FI4 (390 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5ITU-A nrPDB 790 0.0 1TDH-A nrPDB 698 0.0 5ITQ-A nrPDB 593 e-170 3TWL-A nrPDB 53 2e-07 1EE8-A nrPDB 50 1e-06 4PD2-A nrPDB 46 3e-05 3A42-A nrPDB 43 2e-04 3W0F-A nrPDB 41 7e-04 4MB7-A nrPDB 40 0.002 1Q3B-A nrPDB 39 0.004 1K82-A nrPDB 38 0.008 1L1Z-A nrPDB 33 0.23 5Z16-A nrPDB 32 0.66 4ZDA-A nrPDB 30 1.2 2Y9J-Y nrPDB 30 1.4 3J6D-a nrPDB 30 2.0 3GPU-A nrPDB 28 5.5 1UAP-A nrPDB 28 5.9 6G4S-u nrPDB 28 6.3 >5ITU-A nrPDB Length = 400 Score = 790 bits (2040), Expect = 0.0, Method: Compositional matrix adjust. Identities = 390/390 (100%), Positives = 390/390 (100%) Query: 1 MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYRISASARGKELRLIL 60 MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYRISASARGKELRLIL Sbjct: 1 MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYRISASARGKELRLIL 60 Query: 61 SPLPGAQPQQEPLALVFRFGMSGSFQLVPREELPRHAHLRFYTAPPGPRLALCFVDIRRF 120 SPLPGAQPQQEPLALVFRFGMSGSFQLVPREELPRHAHLRFYTAPPGPRLALCFVDIRRF Sbjct: 61 SPLPGAQPQQEPLALVFRFGMSGSFQLVPREELPRHAHLRFYTAPPGPRLALCFVDIRRF 120 Query: 121 GRWDLGGKWQPGRGPCVLQEYQQFRENVLRNLADKAFDRPICEALLDQRFFNGIGNYLRA 180 GRWDLGGKWQPGRGPCVLQEYQQFRENVLRNLADKAFDRPICEALLDQRFFNGIGNYLRA Sbjct: 121 GRWDLGGKWQPGRGPCVLQEYQQFRENVLRNLADKAFDRPICEALLDQRFFNGIGNYLRA 180 Query: 181 EILYRLKIPPFEKARSVLEALQQHRPSPELTLSQKIRTKLQNPDLLELCHSVPKEVVQLG 240 EILYRLKIPPFEKARSVLEALQQHRPSPELTLSQKIRTKLQNPDLLELCHSVPKEVVQLG Sbjct: 181 EILYRLKIPPFEKARSVLEALQQHRPSPELTLSQKIRTKLQNPDLLELCHSVPKEVVQLG 240 Query: 241 GKGYGSESGEEDFAAFRAWLRCYGMPGMSSLQDRHGRTIWFQGDPGPLAPKGRKSRKKKS 300 GKGYGSESGEEDFAAFRAWLRCYGMPGMSSLQDRHGRTIWFQGDPGPLAPKGRKSRKKKS Sbjct: 241 GKGYGSESGEEDFAAFRAWLRCYGMPGMSSLQDRHGRTIWFQGDPGPLAPKGRKSRKKKS 300 Query: 301 KATQLSPEDRVEDALPPSKAPSRTRRAKRDLPKRTATQRPEGTSLQQDPEAPTVPKKGRR 360 KATQLSPEDRVEDALPPSKAPSRTRRAKRDLPKRTATQRPEGTSLQQDPEAPTVPKKGRR Sbjct: 301 KATQLSPEDRVEDALPPSKAPSRTRRAKRDLPKRTATQRPEGTSLQQDPEAPTVPKKGRR 360 Query: 361 KGRQAASGHCRPRKVKADIPSLEPEGTSAS 390 KGRQAASGHCRPRKVKADIPSLEPEGTSAS Sbjct: 361 KGRQAASGHCRPRKVKADIPSLEPEGTSAS 390 >1TDH-A nrPDB Length = 364 Score = 698 bits (1801), Expect = 0.0, Method: Compositional matrix adjust. Identities = 362/390 (92%), Positives = 364/390 (93%), Gaps = 26/390 (6%) Query: 1 MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYRISASARGKELRLIL 60 MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYRISASARGKELRLIL Sbjct: 1 MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYRISASARGKELRLIL 60 Query: 61 SPLPGAQPQQEPLALVFRFGMSGSFQLVPREELPRHAHLRFYTAPPGPRLALCFVDIRRF 120 SPLPGAQPQQEPLALVFRFGMSGSFQLVPREELPRHAHLRFYTAPPGPRLALCFVDIRRF Sbjct: 61 SPLPGAQPQQEPLALVFRFGMSGSFQLVPREELPRHAHLRFYTAPPGPRLALCFVDIRRF 120 Query: 121 GRWDLGGKWQPGRGPCVLQEYQQFRENVLRNLADKAFDRPICEALLDQRFFNGIGNYLRA 180 GRWDLGGKWQPGRGPCVLQEYQQFRE+VLRNLADKAFDRPICEALLDQRFFNGIGNYLRA Sbjct: 121 GRWDLGGKWQPGRGPCVLQEYQQFRESVLRNLADKAFDRPICEALLDQRFFNGIGNYLRA 180 Query: 181 EILYRLKIPPFEKARSVLEALQQHRPSPELTLSQKIRTKLQNPDLLELCHSVPKEVVQLG 240 EILYRLKIPPFEKARSVLEALQQHRPSPELTLSQKIRTKLQNPDLLELCHSVPKEVVQLG Sbjct: 181 EILYRLKIPPFEKARSVLEALQQHRPSPELTLSQKIRTKLQNPDLLELCHSVPKEVVQLG 240 Query: 241 GKGYGSESGEEDFAAFRAWLRCYGMPGMSSLQDRHGRTIWFQGDPGPLAPKGRKSRKKKS 300 G+GYGSESGEEDFAAFRAWLRCYGMPGMSSLQDRHGRTIWFQGDPGPLAPKGRKSRKKKS Sbjct: 241 GRGYGSESGEEDFAAFRAWLRCYGMPGMSSLQDRHGRTIWFQGDPGPLAPKGRKSRKKKS 300 Query: 301 KATQLSPEDRVEDALPPSKAPSRTRRAKRDLPKRTATQRPEGTSLQQDPEAPTVPKKGRR 360 KATQLSPEDRVEDALPPSKAPSRTRRAKRDLPK R Sbjct: 301 KATQLSPEDRVEDALPPSKAPSRTRRAKRDLPK--------------------------R 334 Query: 361 KGRQAASGHCRPRKVKADIPSLEPEGTSAS 390 KGRQAASGHCRPRKVKADIPSLEPEGTSAS Sbjct: 335 KGRQAASGHCRPRKVKADIPSLEPEGTSAS 364 >5ITQ-A nrPDB Length = 290 Score = 593 bits (1528), Expect = e-170, Method: Compositional matrix adjust. Identities = 288/290 (99%), Positives = 290/290 (100%) Query: 1 MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYRISASARGKELRLIL 60 MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYRISASARGKELRLIL Sbjct: 1 MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYRISASARGKELRLIL 60 Query: 61 SPLPGAQPQQEPLALVFRFGMSGSFQLVPREELPRHAHLRFYTAPPGPRLALCFVDIRRF 120 SPLPGAQPQQEPLALVFRFGMSGSFQLVPREELPRHAHLRFYTAPPGPRLALCFVDIRRF Sbjct: 61 SPLPGAQPQQEPLALVFRFGMSGSFQLVPREELPRHAHLRFYTAPPGPRLALCFVDIRRF 120 Query: 121 GRWDLGGKWQPGRGPCVLQEYQQFRENVLRNLADKAFDRPICEALLDQRFFNGIGNYLRA 180 GRWDLGGKWQPGRGPCVLQEYQQFRE+VLRNLADKAFDRPICEALLDQRFFNGIGNYLRA Sbjct: 121 GRWDLGGKWQPGRGPCVLQEYQQFRESVLRNLADKAFDRPICEALLDQRFFNGIGNYLRA 180 Query: 181 EILYRLKIPPFEKARSVLEALQQHRPSPELTLSQKIRTKLQNPDLLELCHSVPKEVVQLG 240 EILYRLKIPPFEKARSVLEALQQHRPSPELTLSQKIRTKLQNPDLLELCHSVPKEVVQLG Sbjct: 181 EILYRLKIPPFEKARSVLEALQQHRPSPELTLSQKIRTKLQNPDLLELCHSVPKEVVQLG 240 Query: 241 GKGYGSESGEEDFAAFRAWLRCYGMPGMSSLQDRHGRTIWFQGDPGPLAP 290 G+GYGSESGEEDFAAFRAWLRCYGMPGMSSLQDRHGRTIWFQGDPGPLAP Sbjct: 241 GRGYGSESGEEDFAAFRAWLRCYGMPGMSSLQDRHGRTIWFQGDPGPLAP 290 >3TWL-A nrPDB Length = 310 Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 64/232 (27%), Positives = 97/232 (41%), Gaps = 60/232 (25%) Query: 1 MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEV-------PFESSAY---RISAS 50 MPE PE+ A + + E C G +++ ++ + +V F++S ISA Sbjct: 1 MPELPEVEAARRAIEENC----LGKKIKRVIIADDNKVIHGISPSDFQTSILGKTIISAR 56 Query: 51 ARGKELRLILS--PLPGAQPQQEPLALVFRFGMSGSFQLV-------------PREELPR 95 +GK L L L P P F+FGM+G+ + EE P Sbjct: 57 RKGKNLWLELDSPPFPS-----------FQFGMAGAIYIKGVAVTKYKRSAVKDSEEWPS 105 Query: 96 HAHLRFYTAPPGPRLALCFVDIRRFGRWDLGGKWQPGR-------GPCVLQE---YQQFR 145 F G L L F D RRF + L P GP L E +F Sbjct: 106 KYSKFFVELDDG--LELSFTDKRRFAKVRLLA--NPTSVSPISELGPDALLEPMTVDEFA 161 Query: 146 ENVLRNLADKAFDRPICEALLDQRFFNGIGNYLRAEILYRLKIPPFEKARSV 197 E++ + K +P+ LLDQ + +GIGN++ E+LY+ +I P + A S+ Sbjct: 162 ESLAKK---KITIKPL---LLDQGYISGIGNWIADEVLYQARIHPLQTASSL 207 >1EE8-A nrPDB Length = 266 Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 67/213 (31%), Positives = 89/213 (41%), Gaps = 44/213 (20%) Query: 2 PEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYRISASARGKEL----- 56 PE PE+ + R LV G + + V R+P + YR +A A G+ + Sbjct: 1 PELPEV----ETTRRRLRPLVLGQTL-RQVVHRDP------ARYRNTALAEGRRILEVDR 49 Query: 57 --RLILSPLPGAQPQQEPLALVFRFGMSGSFQLVPREELPRHAHLRFYTAPPGPRLALCF 114 + +L L G + LV GM+G F+L P H R G L F Sbjct: 50 RGKFLLFALEGG------VELVAHLGMTGGFRLEP------TPHTRAALVLEGR--TLYF 95 Query: 115 VDIRRFGRWDLGGKWQPGR--------GPCVLQEYQQFRENVLRNLADKAFDRPICEALL 166 D RRFGR G + R GP L E F R L + A RP+ LL Sbjct: 96 HDPRRFGRL-FGVRRGDYREIPLLLRLGPEPLSEAFAF-PGFFRGLKESA--RPLKALLL 151 Query: 167 DQRFFNGIGNYLRAEILYRLKIPPFEKARSVLE 199 DQR G+GN E L+R ++ PF ARS+ E Sbjct: 152 DQRLAAGVGNIYADEALFRARLSPFRPARSLTE 184 >4PD2-A nrPDB Length = 272 Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 49/204 (24%), Positives = 83/204 (40%), Gaps = 41/204 (20%) Query: 75 LVFRFGMSGSFQLV----PREELPRHAHLRFYTAPPGPRLALCFVDIRRFGRWDLGGKWQ 130 L+ M G ++L PRE +H HL A L + D+R+FG W+L Q Sbjct: 69 LISHLRMEGKYRLATLDAPRE---KHDHLTMKFADG----QLIYADVRKFGTWELISTDQ 121 Query: 131 PGRGPCVLQE-------YQQFRENVLRNLADKAFDRPICEALLDQRFFNGIGNYLRAEIL 183 P L++ Y+ F E + R K+ + I LL+Q G+GN E+L Sbjct: 122 VL--PYFLKKKIGPEPTYEDFDEKLFREKLRKS-TKKIKPYLLEQTLVAGLGNIYVDEVL 178 Query: 184 YRLKIPPFEKARSVLEALQQHRPSPELTLSQKIRTKLQNPDLLELCHSVPKEVVQLGGKG 243 + KI P ++ ++E+ L + ++E+ ++ ++LGG Sbjct: 179 WLAKIHPEKETNQLIES----------------SIHLLHDSIIEIL----QKAIKLGGSS 218 Query: 244 YGSESGEEDFAAFRAWLRCYGMPG 267 + S + L+ YG G Sbjct: 219 IRTYSALGSTGKMQNELQVYGKTG 242 >3A42-A nrPDB Length = 295 Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 53/207 (25%), Positives = 82/207 (39%), Gaps = 37/207 (17%) Query: 1 MPEGPELHLASQFVNEACR--ALVFGGCVEKSSVSRNPE--------VPFESSAYRISAS 50 MPEGPE+ L + + + + L + + PE +P + S + Sbjct: 1 MPEGPEVALTADILEKYFKGKTLEYIDFISGRYSKSEPEGYDDFIANLPLKVS----NVD 56 Query: 51 ARGKELRLILSPLPGAQPQQEPLALVFRFGMSGSFQLVPREELPRHAHLRFYTAPPGPRL 110 +GK L L + + FG++G + L E A L F L Sbjct: 57 TKGKFLWF---ELFDPNDKSNKWYIWNTFGLTGMWSLF--EAKYTRAVLSF-----DNEL 106 Query: 111 ALCFVDIRRFGRWDLGGKWQPGR------GPCVLQEYQQFRENVLRNLADKAFDRPICEA 164 F D+R FG + + + GP L + + + K + +PI Sbjct: 107 MAYFSDMRNFGTFKFSNSEKELKRKLNELGPDFL------KNDDIDISKIKKYKQPIVAL 160 Query: 165 LLDQRFF-NGIGNYLRAEILYRLKIPP 190 L+DQ+ +G+GNYL AEILYR KI P Sbjct: 161 LMDQKKIGSGLGNYLVAEILYRAKIDP 187 >3W0F-A nrPDB Length = 287 Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 39/134 (29%), Positives = 56/134 (41%), Gaps = 23/134 (17%) Query: 72 PLALVFRFGMSGSFQLVPREELPRHAHLRFYTAPPGPRLA-------LCFVDIRRFGRWD 124 P AL FGM GS + PRE R A P LA +CF D + Sbjct: 89 PRALRIHFGMKGSILINPREGENR--------AGASPALAVQLTRDLICFYD----SSVE 136 Query: 125 LGGKWQPGRGPCVLQEYQ----QFRENVLRNLADKAFDRPICEALLDQRFFNGIGNYLRA 180 L + + V++E +F + + K DR +C+ LLDQR G+GN ++ Sbjct: 137 LRNSVESQQRVRVMEELDICSPKFSFSRAESEVKKQGDRMLCDVLLDQRVLPGVGNIIKN 196 Query: 181 EILYRLKIPPFEKA 194 E L+ + P K Sbjct: 197 EALFDSGLHPAVKV 210 >4MB7-A nrPDB Length = 273 Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 1/60 (1%) Query: 140 EYQQFRENVLRNLADKAFDRPICEALLDQRFFNGIGNYLRAEILYRLKIPPFEKARSVLE 199 +Y F+ + L+N + I + LLDQ +F G+GN L+ E LY KI P +K + + E Sbjct: 147 DYNLFQSH-LKNGINIHSSEIITDFLLDQEYFPGVGNILQQEALYDCKILPLKKVQDIDE 205 >1Q3B-A nrPDB Length = 262 Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust. Identities = 17/40 (42%), Positives = 25/40 (62%) Query: 158 DRPICEALLDQRFFNGIGNYLRAEILYRLKIPPFEKARSV 197 +R LLDQ F G+GNYLR EIL+++ + KA+ + Sbjct: 150 NRQFAGLLLDQAFLAGLGNYLRVEILWQVGLTGNHKAKDL 189 >1K82-A nrPDB Length = 268 Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust. Identities = 38/130 (29%), Positives = 54/130 (41%), Gaps = 14/130 (10%) Query: 75 LVFRFGMSGSFQLVPREELP--RHAHLRFYTAPPGPRLALCFVDIRRFGRWDL-----GG 127 ++ GMSGS +++P EELP +H H+ + L + D RRFG W G Sbjct: 67 IIIHLGMSGSLRILP-EELPPEKHDHVDLVMSNGK---VLRYTDPRRFGAWLWTKELEGH 122 Query: 128 KWQPGRGPCVLQEYQQFRENVLRNLADKAFDRPICEALLDQRFFNGIGNYLRAEILYRLK 187 GP L + F L K I L+D + G+GN +E L+ Sbjct: 123 NVLTHLGPEPLSD--DFNGEYLHQKCAKK-KTAIKPWLMDNKLVVGVGNIYASESLFAAG 179 Query: 188 IPPFEKARSV 197 I P A S+ Sbjct: 180 IHPDRLASSL 189 >1L1Z-A nrPDB Length = 274 Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust. Identities = 54/213 (25%), Positives = 82/213 (38%), Gaps = 34/213 (15%) Query: 1 MPEGPELHLASQFVNEACRALVFGGCVEKS-----SVSRNPEVPFESSAYRISASARGKE 55 MPE PE+ + + L+ G +E ++ R+P +A I + RG E Sbjct: 1 MPELPEV----ETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDSEAFAARMIGQTVRGLE 56 Query: 56 -----LRLILSPLPGAQPQQEPLALVFRFGMSGSFQLVPREE-LPRHAHLRFYTAPPGPR 109 L+ +L + AL+ M G + + E L H H+ F Sbjct: 57 RRGKFLKFLL----------DRDALISHLRMEGRYAVASALEPLEPHTHVVFCFTDGS-- 104 Query: 110 LALCFVDIRRFGRWDLGGKWQPGRGPCVLQEYQQ-----FRENVLRNLADKAFDRPICEA 164 L + D+R+FG + K + R P + + + F VL A K R + Sbjct: 105 -ELRYRDVRKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKT-KRSVKAL 162 Query: 165 LLDQRFFNGIGNYLRAEILYRLKIPPFEKARSV 197 LLDQ G GN E L+R I P A S+ Sbjct: 163 LLDQTVVAGFGNIYVDESLFRAGILPGRPAASL 195 >5Z16-A nrPDB Length = 751 Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust. Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 1/59 (1%) Query: 198 LEALQQHRPSPELTLSQKIRTKLQNPDLLELCHSVPKEVVQLGGKGYGSESGEEDFAAF 256 L A Q+HRP+ + S K T +P+ + + S+P +++ GGK +G++ + D A Sbjct: 327 LHACQEHRPALAMVDSAKGITNFHSPNDIIVDASMPA-MIRAGGKMWGADGKQYDAKAV 384 >4ZDA-A nrPDB Length = 767 Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust. Identities = 25/98 (25%), Positives = 49/98 (50%), Gaps = 6/98 (6%) Query: 163 EALLDQRFFNGIGNYLRAEILYRLKIPPFEKARSVLEALQ---QHRPSPELTLSQKIRTK 219 E L D+ N + N L +++ +++ P + ++E L +HRP + S K + Sbjct: 285 EKLFDELGVN-VNNGL-SDLYDKIEALPASQREEIIEDLHKCHEHRPELAMVDSAKGISN 342 Query: 220 LQNPDLLELCHSVPKEVVQLGGKGYGSESGEEDFAAFR 257 +P + + S+P +++LGGK YG++ +D A Sbjct: 343 FHSPSDVIVDASMPA-MIRLGGKMYGADGRTKDTKAVN 379 >2Y9J-Y nrPDB Length = 170 Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust. Identities = 11/38 (28%), Positives = 17/38 (44%) Query: 229 CHSVPKEVVQLGGKGYGSESGEEDFAAFRAWLRCYGMP 266 H++ + G GY E DF A W++ Y +P Sbjct: 21 MHNIEANKIDSGKLGYSITVAEPDFTAAVYWIKTYQLP 58 >3J6D-a nrPDB Length = 252 Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust. Identities = 11/38 (28%), Positives = 17/38 (44%) Query: 229 CHSVPKEVVQLGGKGYGSESGEEDFAAFRAWLRCYGMP 266 H++ + G GY E DF A W++ Y +P Sbjct: 41 MHNIEANKIDSGKLGYSITVAEPDFTAAVYWIKTYQLP 78 >3GPU-A nrPDB Length = 256 Score = 28.5 bits (62), Expect = 5.5, Method: Compositional matrix adjust. Identities = 36/130 (27%), Positives = 51/130 (39%), Gaps = 10/130 (7%) Query: 74 ALVFRFGMSGSFQLVPREE-LPRHAHLRFYTAPPGPRLALCFVDIRRFGRWDLGGKWQPG 132 AL+ M G + + E L H H+ F L + D+R+FG + K + Sbjct: 69 ALISHLRMEGRYAVASALEPLEPHTHVVFCFTDGS---ELRYRDVRKFGTMHVYAKEEAD 125 Query: 133 RGPCVLQEYQQ-----FRENVLRNLADKAFDRPICEALLDQRFFNGIGNYLRAEILYRLK 187 R P + + + F VL A K R + LLD G GN E L+R Sbjct: 126 RRPPLAELGPEPLSPAFSPAVLAERAVKT-KRSVKALLLDCTVVAGFGNIYVDESLFRAG 184 Query: 188 IPPFEKARSV 197 I P A S+ Sbjct: 185 ILPGRPAASL 194 >1UAP-A nrPDB Length = 154 Score = 28.5 bits (62), Expect = 5.9, Method: Compositional matrix adjust. Identities = 14/43 (32%), Positives = 23/43 (53%) Query: 340 PEGTSLQQDPEAPTVPKKGRRKGRQAASGHCRPRKVKADIPSL 382 P G+ + + P+APT PK+ RR G ++ V A + S+ Sbjct: 16 PRGSHMLESPDAPTCPKQCRRTGTLQSNFCASSLVVTATVKSM 58 >6G4S-u nrPDB Length = 804 Score = 28.1 bits (61), Expect = 6.3, Method: Compositional matrix adjust. Identities = 13/31 (41%), Positives = 18/31 (58%) Query: 283 GDPGPLAPKGRKSRKKKSKATQLSPEDRVED 313 GDP PL P+G K +K A ++ D V+D Sbjct: 306 GDPFPLNPRGIKPQKDPDMAMEICATDAVDD 336 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5ITU-A nrPDB 625 e-179 1TDH-A nrPDB 559 e-160 5ITQ-A nrPDB 467 e-132 4PD2-A nrPDB 190 9e-49 3A42-A nrPDB 185 3e-47 3TWL-A nrPDB 156 1e-38 1EE8-A nrPDB 155 4e-38 3W0F-A nrPDB 125 3e-29 Sequences not found previously or not previously below threshold: 1L1Z-A nrPDB 113 1e-25 1K82-A nrPDB 103 1e-22 3GPU-A nrPDB 95 4e-20 1Q3B-A nrPDB 61 7e-10 4MB7-A nrPDB 53 3e-07 5HFU-A nrPDB 36 0.028 1WIO-A nrPDB 32 0.35 5ZRD-A nrPDB 32 0.43 6G4S-u nrPDB 31 0.67 3NG6-B nrPDB 31 0.95 2EL7-A nrPDB 30 2.1 >5ITU-A nrPDB Length = 400 Score = 625 bits (1611), Expect = e-179, Method: Composition-based stats. Identities = 390/390 (100%), Positives = 390/390 (100%) Query: 1 MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYRISASARGKELRLIL 60 MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYRISASARGKELRLIL Sbjct: 1 MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYRISASARGKELRLIL 60 Query: 61 SPLPGAQPQQEPLALVFRFGMSGSFQLVPREELPRHAHLRFYTAPPGPRLALCFVDIRRF 120 SPLPGAQPQQEPLALVFRFGMSGSFQLVPREELPRHAHLRFYTAPPGPRLALCFVDIRRF Sbjct: 61 SPLPGAQPQQEPLALVFRFGMSGSFQLVPREELPRHAHLRFYTAPPGPRLALCFVDIRRF 120 Query: 121 GRWDLGGKWQPGRGPCVLQEYQQFRENVLRNLADKAFDRPICEALLDQRFFNGIGNYLRA 180 GRWDLGGKWQPGRGPCVLQEYQQFRENVLRNLADKAFDRPICEALLDQRFFNGIGNYLRA Sbjct: 121 GRWDLGGKWQPGRGPCVLQEYQQFRENVLRNLADKAFDRPICEALLDQRFFNGIGNYLRA 180 Query: 181 EILYRLKIPPFEKARSVLEALQQHRPSPELTLSQKIRTKLQNPDLLELCHSVPKEVVQLG 240 EILYRLKIPPFEKARSVLEALQQHRPSPELTLSQKIRTKLQNPDLLELCHSVPKEVVQLG Sbjct: 181 EILYRLKIPPFEKARSVLEALQQHRPSPELTLSQKIRTKLQNPDLLELCHSVPKEVVQLG 240 Query: 241 GKGYGSESGEEDFAAFRAWLRCYGMPGMSSLQDRHGRTIWFQGDPGPLAPKGRKSRKKKS 300 GKGYGSESGEEDFAAFRAWLRCYGMPGMSSLQDRHGRTIWFQGDPGPLAPKGRKSRKKKS Sbjct: 241 GKGYGSESGEEDFAAFRAWLRCYGMPGMSSLQDRHGRTIWFQGDPGPLAPKGRKSRKKKS 300 Query: 301 KATQLSPEDRVEDALPPSKAPSRTRRAKRDLPKRTATQRPEGTSLQQDPEAPTVPKKGRR 360 KATQLSPEDRVEDALPPSKAPSRTRRAKRDLPKRTATQRPEGTSLQQDPEAPTVPKKGRR Sbjct: 301 KATQLSPEDRVEDALPPSKAPSRTRRAKRDLPKRTATQRPEGTSLQQDPEAPTVPKKGRR 360 Query: 361 KGRQAASGHCRPRKVKADIPSLEPEGTSAS 390 KGRQAASGHCRPRKVKADIPSLEPEGTSAS Sbjct: 361 KGRQAASGHCRPRKVKADIPSLEPEGTSAS 390 >1TDH-A nrPDB Length = 364 Score = 559 bits (1441), Expect = e-160, Method: Composition-based stats. Identities = 362/390 (92%), Positives = 364/390 (93%), Gaps = 26/390 (6%) Query: 1 MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYRISASARGKELRLIL 60 MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYRISASARGKELRLIL Sbjct: 1 MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYRISASARGKELRLIL 60 Query: 61 SPLPGAQPQQEPLALVFRFGMSGSFQLVPREELPRHAHLRFYTAPPGPRLALCFVDIRRF 120 SPLPGAQPQQEPLALVFRFGMSGSFQLVPREELPRHAHLRFYTAPPGPRLALCFVDIRRF Sbjct: 61 SPLPGAQPQQEPLALVFRFGMSGSFQLVPREELPRHAHLRFYTAPPGPRLALCFVDIRRF 120 Query: 121 GRWDLGGKWQPGRGPCVLQEYQQFRENVLRNLADKAFDRPICEALLDQRFFNGIGNYLRA 180 GRWDLGGKWQPGRGPCVLQEYQQFRE+VLRNLADKAFDRPICEALLDQRFFNGIGNYLRA Sbjct: 121 GRWDLGGKWQPGRGPCVLQEYQQFRESVLRNLADKAFDRPICEALLDQRFFNGIGNYLRA 180 Query: 181 EILYRLKIPPFEKARSVLEALQQHRPSPELTLSQKIRTKLQNPDLLELCHSVPKEVVQLG 240 EILYRLKIPPFEKARSVLEALQQHRPSPELTLSQKIRTKLQNPDLLELCHSVPKEVVQLG Sbjct: 181 EILYRLKIPPFEKARSVLEALQQHRPSPELTLSQKIRTKLQNPDLLELCHSVPKEVVQLG 240 Query: 241 GKGYGSESGEEDFAAFRAWLRCYGMPGMSSLQDRHGRTIWFQGDPGPLAPKGRKSRKKKS 300 G+GYGSESGEEDFAAFRAWLRCYGMPGMSSLQDRHGRTIWFQGDPGPLAPKGRKSRKKKS Sbjct: 241 GRGYGSESGEEDFAAFRAWLRCYGMPGMSSLQDRHGRTIWFQGDPGPLAPKGRKSRKKKS 300 Query: 301 KATQLSPEDRVEDALPPSKAPSRTRRAKRDLPKRTATQRPEGTSLQQDPEAPTVPKKGRR 360 KATQLSPEDRVEDALPPSKAPSRTRRAKRDLPK R Sbjct: 301 KATQLSPEDRVEDALPPSKAPSRTRRAKRDLPK--------------------------R 334 Query: 361 KGRQAASGHCRPRKVKADIPSLEPEGTSAS 390 KGRQAASGHCRPRKVKADIPSLEPEGTSAS Sbjct: 335 KGRQAASGHCRPRKVKADIPSLEPEGTSAS 364 >5ITQ-A nrPDB Length = 290 Score = 467 bits (1202), Expect = e-132, Method: Composition-based stats. Identities = 288/290 (99%), Positives = 290/290 (100%) Query: 1 MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYRISASARGKELRLIL 60 MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYRISASARGKELRLIL Sbjct: 1 MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYRISASARGKELRLIL 60 Query: 61 SPLPGAQPQQEPLALVFRFGMSGSFQLVPREELPRHAHLRFYTAPPGPRLALCFVDIRRF 120 SPLPGAQPQQEPLALVFRFGMSGSFQLVPREELPRHAHLRFYTAPPGPRLALCFVDIRRF Sbjct: 61 SPLPGAQPQQEPLALVFRFGMSGSFQLVPREELPRHAHLRFYTAPPGPRLALCFVDIRRF 120 Query: 121 GRWDLGGKWQPGRGPCVLQEYQQFRENVLRNLADKAFDRPICEALLDQRFFNGIGNYLRA 180 GRWDLGGKWQPGRGPCVLQEYQQFRE+VLRNLADKAFDRPICEALLDQRFFNGIGNYLRA Sbjct: 121 GRWDLGGKWQPGRGPCVLQEYQQFRESVLRNLADKAFDRPICEALLDQRFFNGIGNYLRA 180 Query: 181 EILYRLKIPPFEKARSVLEALQQHRPSPELTLSQKIRTKLQNPDLLELCHSVPKEVVQLG 240 EILYRLKIPPFEKARSVLEALQQHRPSPELTLSQKIRTKLQNPDLLELCHSVPKEVVQLG Sbjct: 181 EILYRLKIPPFEKARSVLEALQQHRPSPELTLSQKIRTKLQNPDLLELCHSVPKEVVQLG 240 Query: 241 GKGYGSESGEEDFAAFRAWLRCYGMPGMSSLQDRHGRTIWFQGDPGPLAP 290 G+GYGSESGEEDFAAFRAWLRCYGMPGMSSLQDRHGRTIWFQGDPGPLAP Sbjct: 241 GRGYGSESGEEDFAAFRAWLRCYGMPGMSSLQDRHGRTIWFQGDPGPLAP 290 >4PD2-A nrPDB Length = 272 Score = 190 bits (482), Expect = 9e-49, Method: Composition-based stats. Identities = 59/281 (20%), Positives = 107/281 (38%), Gaps = 54/281 (19%) Query: 2 PEGPELHLASQFVNEAC---RALVFGGCVEKSSVSRNPEVPFE-SSAYRISASARGKELR 57 PE PE+ + + + + + + ++ ++ E + S RGK L Sbjct: 1 PELPEVETVRRELEKRIVGQKIISIEATYPRMVLTGFEQLKKELTGKTIQGISRRGKYLI 60 Query: 58 LILSPLPGAQPQQEPLALVFRFGMSGSFQLV----PREELPRHAHLRFYTAPPGPRLALC 113 + + L+ M G ++L PRE +H HL A L Sbjct: 61 FEI---------GDDFRLISHLRMEGKYRLATLDAPRE---KHDHLTMKFADG----QLI 104 Query: 114 FVDIRRFGRWDLGGKWQPGRGPCVLQE-------YQQFRENVLRNLADKAFDRPICEALL 166 + D+R+FG W+L Q P L++ Y+ F E + R K+ + I LL Sbjct: 105 YADVRKFGTWELISTDQVL--PYFLKKKIGPEPTYEDFDEKLFREKLRKS-TKKIKPYLL 161 Query: 167 DQRFFNGIGNYLRAEILYRLKIPPFEKARSVLEALQQHRPSPELTLSQKIRTKLQNPDLL 226 +Q G+GN E+L+ KI P ++ ++E+ L + ++ Sbjct: 162 EQTLVAGLGNIYVDEVLWLAKIHPEKETNQLIES----------------SIHLLHDSII 205 Query: 227 ELCHSVPKEVVQLGGKGYGSESGEEDFAAFRAWLRCYGMPG 267 E+ ++ ++LGG + S + L+ YG G Sbjct: 206 EIL----QKAIKLGGSSIRTYSALGSTGKMQNELQVYGKTG 242 >3A42-A nrPDB Length = 295 Score = 185 bits (469), Expect = 3e-47, Method: Composition-based stats. Identities = 62/262 (23%), Positives = 102/262 (38%), Gaps = 43/262 (16%) Query: 1 MPEGPELHLASQFVNEACR--ALVFGGCVEKSSVSRNPE--------VPFESSAYRISAS 50 MPEGPE+ L + + + + L + + PE +P + S + Sbjct: 1 MPEGPEVALTADILEKYFKGKTLEYIDFISGRYSKSEPEGYDDFIANLPLKVS----NVD 56 Query: 51 ARGKELRLILSPLPGAQPQQEPLALVFRFGMSGSFQLVPREELPRHAHLRFYTAPPGPRL 110 +GK L L + + FG++G + L E A L F L Sbjct: 57 TKGKFLWF---ELFDPNDKSNKWYIWNTFGLTGMWSLF--EAKYTRAVLSF-----DNEL 106 Query: 111 ALCFVDIRRFGRWDLGGKWQPGR------GPCVLQEYQQFRENVLRNLADKAFDRPICEA 164 F D+R FG + + + GP L + + + K + +PI Sbjct: 107 MAYFSDMRNFGTFKFSNSEKELKRKLNELGPDFL------KNDDIDISKIKKYKQPIVAL 160 Query: 165 LLDQRFF-NGIGNYLRAEILYRLKIPPFEKARSVLEALQQHRPSPELTLSQKIRTKLQNP 223 L+DQ+ +G+GNYL AEILYR KI P + ++ + ++ L K TKL Sbjct: 161 LMDQKKIGSGLGNYLVAEILYRAKIDPHKLGSNLTDQEIEN-----LWYWIKYETKLAYD 215 Query: 224 D-LLELCHSVPKEVVQLGGKGY 244 + ++ E ++G K Y Sbjct: 216 SNHIGYMVNLENESSKIGRKNY 237 >3TWL-A nrPDB Length = 310 Score = 156 bits (394), Expect = 1e-38, Method: Composition-based stats. Identities = 61/228 (26%), Positives = 92/228 (40%), Gaps = 52/228 (22%) Query: 1 MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEV-------PFESSAY---RISAS 50 MPE PE+ A + + E C G +++ ++ + +V F++S ISA Sbjct: 1 MPELPEVEAARRAIEENC----LGKKIKRVIIADDNKVIHGISPSDFQTSILGKTIISAR 56 Query: 51 ARGKELRLILSPLPGAQPQQEPLALVFRFGMSGSFQLV-------------PREELPRHA 97 +GK L L L P F+FGM+G+ + EE P Sbjct: 57 RKGKNLWLELDSPPFPS---------FQFGMAGAIYIKGVAVTKYKRSAVKDSEEWPSKY 107 Query: 98 HLRFYTAPPGPRLALCFVDIRRFGRWDLGGKWQPGR-----GPCVLQE---YQQFRENVL 149 F G L L F D RRF + L GP L E +F E++ Sbjct: 108 SKFFVELDDG--LELSFTDKRRFAKVRLLANPTSVSPISELGPDALLEPMTVDEFAESLA 165 Query: 150 RNLADKAFDRPICEALLDQRFFNGIGNYLRAEILYRLKIPPFEKARSV 197 + I LLDQ + +GIGN++ E+LY+ +I P + A S+ Sbjct: 166 KKKIT------IKPLLLDQGYISGIGNWIADEVLYQARIHPLQTASSL 207 >1EE8-A nrPDB Length = 266 Score = 155 bits (390), Expect = 4e-38, Method: Composition-based stats. Identities = 79/285 (27%), Positives = 107/285 (37%), Gaps = 67/285 (23%) Query: 2 PEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYRISASARGKEL----- 56 PE PE+ + R LV G + + V R+P + YR +A A G+ + Sbjct: 1 PELPEV----ETTRRRLRPLVLGQTL-RQVVHRDP------ARYRNTALAEGRRILEVDR 49 Query: 57 --RLILSPLPGAQPQQEPLALVFRFGMSGSFQLVPREELPRHAHLRFYTAPPGPRLALCF 114 + +L L G + LV GM+G F+L P H R G L F Sbjct: 50 RGKFLLFALEGG------VELVAHLGMTGGFRLEP------TPHTRAALVLEGR--TLYF 95 Query: 115 VDIRRFGRWDLGGKWQPGR--------GPCVLQEYQQFRENVLRNLADKAFDRPICEALL 166 D RRFGR G + R GP L E F R L + A RP+ LL Sbjct: 96 HDPRRFGRL-FGVRRGDYREIPLLLRLGPEPLSEAFAF-PGFFRGLKESA--RPLKALLL 151 Query: 167 DQRFFNGIGNYLRAEILYRLKIPPFEKARSVLEALQQHRPSPELTLSQKIRTKLQNPDLL 226 DQR G+GN E L+R ++ PF ARS+ E + L Sbjct: 152 DQRLAAGVGNIYADEALFRARLSPFRPARSLTEEEARR--------------------LY 191 Query: 227 ELCHSVPKEVVQLGGKGYGSES---GEEDFAAFRAWLRCYGMPGM 268 V E V+LGG +S + F+ YG G+ Sbjct: 192 RALREVLAEAVELGGSTLSDQSYRQPDGLPGGFQTRHAVYGREGL 236 >3W0F-A nrPDB Length = 287 Score = 125 bits (314), Expect = 3e-29, Method: Composition-based stats. Identities = 39/137 (28%), Positives = 58/137 (42%), Gaps = 9/137 (6%) Query: 72 PLALVFRFGMSGSFQLVPREELPRHAHLRFYTAPPGPRLALCFVDIRRFGRWDLGGKWQP 131 P AL FGM GS + PRE R A A R +CF D +L + Sbjct: 89 PRALRIHFGMKGSILINPREGENR-AGASPALAVQLTRDLICFYD----SSVELRNSVES 143 Query: 132 GRGPCVLQEYQ----QFRENVLRNLADKAFDRPICEALLDQRFFNGIGNYLRAEILYRLK 187 + V++E +F + + K DR +C+ LLDQR G+GN ++ E L+ Sbjct: 144 QQRVRVMEELDICSPKFSFSRAESEVKKQGDRMLCDVLLDQRVLPGVGNIIKNEALFDSG 203 Query: 188 IPPFEKARSVLEALQQH 204 + P K + + H Sbjct: 204 LHPAVKVCQLSDKQACH 220 >1L1Z-A nrPDB Length = 274 Score = 113 bits (283), Expect = 1e-25, Method: Composition-based stats. Identities = 65/285 (22%), Positives = 99/285 (34%), Gaps = 57/285 (20%) Query: 1 MPEGPELHLASQFVNEACRALVFGGCVEKS-----SVSRNPEVPFESSAYRIS-----AS 50 MPE PE+ + + L+ G +E ++ R+P +A I Sbjct: 1 MPELPEV----ETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDSEAFAARMIGQTVRGLE 56 Query: 51 ARGKELRLILSPLPGAQPQQEPLALVFRFGMSGSFQLVPR-EELPRHAHLRFYTAPPGPR 109 RGK L+ +L AL+ M G + + E L H H+ F Sbjct: 57 RRGKFLKFLLD----------RDALISHLRMEGRYAVASALEPLEPHTHVVFCFTDGS-- 104 Query: 110 LALCFVDIRRFGRWDLGGKWQPGRGPCVLQEY------QQFRENVLRNLADKAFDRPICE 163 L + D+R+FG + K + R P L E F VL A K R + Sbjct: 105 -ELRYRDVRKFGTMHVYAKEEADRRP-PLAELGPEPLSPAFSPAVLAERAVK-TKRSVKA 161 Query: 164 ALLDQRFFNGIGNYLRAEILYRLKIPPFEKARSVLEALQQHRPSPELTLSQKIRTKLQNP 223 LLDQ G GN E L+R I P A S+ + + Sbjct: 162 LLLDQTVVAGFGNIYVDESLFRAGILPGRPAASL----------------SSKEIERLHE 205 Query: 224 DLLELCHSVPKEVVQLGGKGYGSE-SGEEDFAAFRAWLRCYGMPG 267 +++ + E V GG + + + + F+ L YG G Sbjct: 206 EMV----ATIGEAVMKGGSTVRTYVNTQGEAGTFQHHLYVYGRQG 246 >1K82-A nrPDB Length = 268 Score = 103 bits (256), Expect = 1e-22, Method: Composition-based stats. Identities = 61/278 (21%), Positives = 95/278 (34%), Gaps = 50/278 (17%) Query: 2 PEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEV--PFESSAYRIS---ASARGKEL 56 PE PE+ + + + + G + + V RN + P YR+S + + Sbjct: 1 PELPEVETSRRGIE----PHLVGATILHAVV-RNGRLRWPVSEEIYRLSDQPVLSVQRRA 55 Query: 57 RLILSPLPGAQPQQEPLALVFRFGMSGSFQLVPREELP-RHAHLRFYTAPPGPRLALCFV 115 + +L LP ++ GMSGS +++P E P +H H+ L + Sbjct: 56 KYLLLELPEG-------WIIIHLGMSGSLRILPEELPPEKHDHVDLVM---SNGKVLRYT 105 Query: 116 DIRRFGRWDL-----GGKWQPGRGPCVLQEYQQFRENVLRNLADKAFDRPICEALLDQRF 170 D RRFG W G GP L F L K I L+D + Sbjct: 106 DPRRFGAWLWTKELEGHNVLTHLGPEPLS--DDFNGEYLHQKCAKK-KTAIKPWLMDNKL 162 Query: 171 FNGIGNYLRAEILYRLKIPPFEKARSVLEALQQHRPSPELTLSQKIRTKLQNPDLLELCH 230 G+GN +E L+ I P A S+ A + L + Sbjct: 163 VVGVGNIYASESLFAAGIHPDRLASSLSLAECEL--------------------LARVIK 202 Query: 231 SVPKEVVQLGGKGYGSE-SGEEDFAAFRAWLRCYGMPG 267 +V ++ GG + F L+ YG G Sbjct: 203 AVLLRSIEQGGTTLKDFLQSDGKPGYFAQELQVYGRKG 240 >3GPU-A nrPDB Length = 256 Score = 95.4 bits (235), Expect = 4e-20, Method: Composition-based stats. Identities = 54/213 (25%), Positives = 77/213 (36%), Gaps = 36/213 (16%) Query: 2 PEGPELHLASQFVNEACRALVFGGCVEKS-----SVSRNPEVPFESSAYRIS-----ASA 51 PE PE+ + + L+ G +E ++ R+P +A I Sbjct: 1 PELPEV----ETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDSEAFAARMIGQTVRGLER 56 Query: 52 RGKELRLILSPLPGAQPQQEPLALVFRFGMSGSFQLVPR-EELPRHAHLRFYTAPPGPRL 110 RGK L+ +L AL+ M G + + E L H H+ F Sbjct: 57 RGKFLKFLLD----------RDALISHLRMEGRYAVASALEPLEPHTHVVFCFTDGS--- 103 Query: 111 ALCFVDIRRFGRWDLGGKWQPGRGPCVLQEY------QQFRENVLRNLADKAFDRPICEA 164 L + D+R+FG + K + R P L E F VL A K R + Sbjct: 104 ELRYRDVRKFGTMHVYAKEEADRRP-PLAELGPEPLSPAFSPAVLAERAVK-TKRSVKAL 161 Query: 165 LLDQRFFNGIGNYLRAEILYRLKIPPFEKARSV 197 LLD G GN E L+R I P A S+ Sbjct: 162 LLDCTVVAGFGNIYVDESLFRAGILPGRPAASL 194 >1Q3B-A nrPDB Length = 262 Score = 61.1 bits (146), Expect = 7e-10, Method: Composition-based stats. Identities = 48/206 (23%), Positives = 73/206 (35%), Gaps = 21/206 (10%) Query: 2 PEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYR----ISASARGKELR 57 PEGPE+ A+ + A + G + + P++ S RGK L Sbjct: 1 PEGPEIRRAADNLEAAIK----GKPLTDVWFAF-PQLKTYQSQLIGQHVTHVETRGKAL- 54 Query: 58 LILSPLPGAQPQQEPLALVFRFGMSGSFQLVPREELP-RHAHLRFYTAPPGPRLALCFVD 116 L L + G +++V E P LR + L Sbjct: 55 --------LTHFSNDLTLYSHNQLYGVWRVVDTGEEPQTTRVLRVKLQTADKTILLYSAS 106 Query: 117 IRRFGRWDLGGKWQPGR--GPCVLQEYQQFRENVLRNLADKAFDRPICEALLDQRFFNGI 174 R + + GP VL R L+ + +R LLDQ F G+ Sbjct: 107 DIEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFLAGL 166 Query: 175 GNYLRAEILYRLKIPPFEKARSVLEA 200 GNYLR EIL+++ + KA+ + A Sbjct: 167 GNYLRVEILWQVGLTGNHKAKDLNAA 192 >4MB7-A nrPDB Length = 273 Score = 52.6 bits (124), Expect = 3e-07, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 56/166 (33%), Gaps = 23/166 (13%) Query: 53 GKELRLILSPLPGAQPQQEPLALVFRFGMSGSFQLVPREELPRHAHLRFYTAPPGPRL-- 110 GK + L+L + + M G LV ++ P L Sbjct: 48 GKYIYLMLI-----SSNKPTYVIRTHMMMHGRI-LVGNQDSPTKRAFMIIQLDNDIVLRW 101 Query: 111 ---ALCFVDIRRFGRWD----LGGKWQPGRGPCVLQEYQ----QFRENVLRNLADKA--- 156 + +D + Q L +Y +F N+ ++ Sbjct: 102 YRSQITLLDPNCLAEIKTNYTICTTRQAIMDSIKLMKYDLSNNRFDYNLFQSHLKNGINI 161 Query: 157 -FDRPICEALLDQRFFNGIGNYLRAEILYRLKIPPFEKARSVLEAL 201 I + LLDQ +F G+GN L+ E LY KI P +K + + E + Sbjct: 162 HSSEIITDFLLDQEYFPGVGNILQQEALYDCKILPLKKVQDIDEPM 207 >5HFU-A nrPDB Length = 923 Score = 36.0 bits (81), Expect = 0.028, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 47/121 (38%), Gaps = 10/121 (8%) Query: 136 CVLQEYQQFRENVLRNLADKAFDRPICEALLDQRFFNGIGNYLRAEILYRLKIPPFEKAR 195 E+ + + N + F++ I L + N + ++ + +L+R +I K R Sbjct: 726 DFRTEFDVAVDELSLNPGKQRFEKMISGMYLGEIVRNILIDFTKRGLLFRGRISERLKTR 785 Query: 196 SVLEALQQHRPSPELTLSQKIRTKLQN--------PDLL--ELCHSVPKEVVQLGGKGYG 245 + E + + ++R LQ+ ++ E+C V + QL G G Sbjct: 786 GIFETKFLSQIESDCLALLQVRAILQHLGLESTCDDSIIVKEVCTVVARRAAQLCGAGMA 845 Query: 246 S 246 + Sbjct: 846 A 846 >1WIO-A nrPDB Length = 363 Score = 32.2 bits (71), Expect = 0.35, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 47/118 (39%), Gaps = 16/118 (13%) Query: 200 ALQQHRPSPELTLSQKIRTKLQNPDLLELCHSVPKEVVQLGGKGYGSESGEEDFAAFRAW 259 ++++ P+L + +K+ L ++P+ + Q G G + + E Sbjct: 237 SVKRVTQDPKLQMGKKLPLHL----------TLPQALPQYAGSGNLTLALEAKTGKLHQE 286 Query: 260 LRCYGMPGMSSLQDRHGRTIWFQGDPGPLAPKGRKSRKKKSKATQLSPEDRVEDALPP 317 + M + LQ +W GP +PK S K ++K ++S ++ L P Sbjct: 287 VNLVVMRA-TQLQKNLTCEVW-----GPTSPKLMLSLKLENKEAKVSKREKAVWVLNP 338 >5ZRD-A nrPDB Length = 549 Score = 32.2 bits (71), Expect = 0.43, Method: Composition-based stats. Identities = 24/139 (17%), Positives = 42/139 (30%), Gaps = 12/139 (8%) Query: 155 KAFDRPICEALLDQRF---FNGIGNYLRAEILYRLKIPPFEKARSVLEALQQHRPSPELT 211 K D P+ +L G GN Y P EAL+Q + Sbjct: 143 KQIDNPLRSFVLPVALSDRLPGDGNIYEKPKGYVTVRYPLSGLVGTPEALEQTKIHNAKF 202 Query: 212 LSQKIRTKLQNPDLLELCHSVPKEVVQLGGKGYGSESGEEDFAAFRAWLRCYGMPGMSSL 271 + T+L N ++ G + + ++RC P + Sbjct: 203 PLPEKNTELLNSNVRAWLK---------GDSPTPGDPDPTRNGVYAKYVRCLSAPNYTVF 253 Query: 272 QDRHGRTIWFQGDPGPLAP 290 + ++W +PG + P Sbjct: 254 SNTTSASVWNSSNPGLVTP 272 >6G4S-u nrPDB Length = 804 Score = 31.4 bits (69), Expect = 0.67, Method: Composition-based stats. Identities = 13/31 (41%), Positives = 18/31 (58%) Query: 283 GDPGPLAPKGRKSRKKKSKATQLSPEDRVED 313 GDP PL P+G K +K A ++ D V+D Sbjct: 306 GDPFPLNPRGIKPQKDPDMAMEICATDAVDD 336 >3NG6-B nrPDB Length = 146 Score = 31.0 bits (68), Expect = 0.95, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 17/40 (42%) Query: 142 QQFRENVLRNLADKAFDRPICEALLDQRFFNGIGNYLRAE 181 F ++ KA R + QR+F+G GN AE Sbjct: 13 DIFSHMDYDDIGPKALSRCLVVYPWTQRYFSGFGNLYNAE 52 >2EL7-A nrPDB Length = 337 Score = 29.9 bits (65), Expect = 2.1, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 22/45 (48%) Query: 159 RPICEALLDQRFFNGIGNYLRAEILYRLKIPPFEKARSVLEALQQ 203 + + EAL ++ G+G Y+ IL+ + R EAL++ Sbjct: 250 KDLVEALKEEYRKAGVGTYVVKRILFDHLMEALRPIRERAEALKK 294 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.300 0.114 0.298 Lambda K H 0.267 0.0342 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 12,681,342 Number of Sequences: 36641 Number of extensions: 476577 Number of successful extensions: 1231 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 32 Number of HSP's successfully gapped in prelim test: 24 Number of HSP's that attempted gapping in prelim test: 1144 Number of HSP's gapped (non-prelim): 78 length of query: 390 length of database: 10,336,785 effective HSP length: 99 effective length of query: 291 effective length of database: 6,709,326 effective search space: 1952413866 effective search space used: 1952413866 T: 11 A: 40 X1: 16 ( 6.9 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.9 bits) S2: 59 (27.6 bits)