BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q96CB9 (384 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 4FZV-A nrPDB 750 0.0 1IXK-A nrPDB 85 5e-17 2FRX-A nrPDB 82 3e-16 6ELZ-q nrPDB 80 2e-15 3M6U-A nrPDB 70 2e-12 2YXL-A nrPDB 69 4e-12 1SQG-A nrPDB 68 8e-12 3AJD-A nrPDB 67 9e-12 5WWT-A nrPDB 67 1e-11 3M4X-A nrPDB 63 2e-10 5ZVG-B nrPDB 59 3e-09 2B9E-A nrPDB 47 2e-05 3P9C-A nrPDB 29 2.8 1U0L-A nrPDB 29 3.0 1ZQ9-A nrPDB 29 4.4 4QMD-A nrPDB 28 6.4 >4FZV-A nrPDB Length = 359 Score = 750 bits (1937), Expect = 0.0, Method: Compositional matrix adjust. Identities = 359/359 (100%), Positives = 359/359 (100%) Query: 26 RYKKKWAATEPKFPAVRLALQNFDMTYSVQFGDLWPSIRVSLLSEQKYGALVNNFAAWDH 85 RYKKKWAATEPKFPAVRLALQNFDMTYSVQFGDLWPSIRVSLLSEQKYGALVNNFAAWDH Sbjct: 1 RYKKKWAATEPKFPAVRLALQNFDMTYSVQFGDLWPSIRVSLLSEQKYGALVNNFAAWDH 60 Query: 86 VSAKLEQLSAKDFVNEAISHWELQSEGGQSAAPSPASWACSPNLRCFTFDRGDISRFPPA 145 VSAKLEQLSAKDFVNEAISHWELQSEGGQSAAPSPASWACSPNLRCFTFDRGDISRFPPA Sbjct: 61 VSAKLEQLSAKDFVNEAISHWELQSEGGQSAAPSPASWACSPNLRCFTFDRGDISRFPPA 120 Query: 146 RPGSLGVMEYYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDL 205 RPGSLGVMEYYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDL Sbjct: 121 RPGSLGVMEYYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDL 180 Query: 206 SPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDRVLVDVPCTTDRHSL 265 SPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDRVLVDVPCTTDRHSL Sbjct: 181 SPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDRVLVDVPCTTDRHSL 240 Query: 266 HEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQGAI 325 HEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQGAI Sbjct: 241 HEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQGAI 300 Query: 326 ELLANQYSIQVQVEDLTHFRRVFMDTFCFFSSCQVGELVIPNLMANFGPMYFCKMRRLT 384 ELLANQYSIQVQVEDLTHFRRVFMDTFCFFSSCQVGELVIPNLMANFGPMYFCKMRRLT Sbjct: 301 ELLANQYSIQVQVEDLTHFRRVFMDTFCFFSSCQVGELVIPNLMANFGPMYFCKMRRLT 359 >1IXK-A nrPDB Length = 315 Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 70/223 (31%), Positives = 108/223 (48%), Gaps = 49/223 (21%) Query: 156 YLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRN-------------LAA 202 Y+ +A+S+ P +AL +PG+IV D+ AAPGGKT L Q RN L Sbjct: 101 YIQEASSMYPPVALDPKPGEIVADMAAAPGGKTSYLAQ--LMRNDGVIYAFDVDENRLRE 158 Query: 203 NDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDRVLVDVPCTTDR 262 L+ SR+ L IL I GEL + +D++L+D PCT Sbjct: 159 TRLNLSRLGVLNVILFHSSSLHI----------------GELNVE-FDKILLDAPCTGS- 200 Query: 263 HSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQ 322 ++H+ + R+ + + LQ++LL GL KPGG +VYSTCSL +NE+V+Q Sbjct: 201 GTIHKNPERKWNRTMD-DIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEFVIQ 259 Query: 323 GAIE--------------LLANQYSIQVQVEDLTHFRRVFMDT 351 A++ L N + I++ E++ + RR++ D Sbjct: 260 WALDNFDVELLPLKYGEPALTNPFGIELS-EEIKNARRLYPDV 301 >2FRX-A nrPDB Length = 479 Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 63/210 (30%), Positives = 106/210 (50%), Gaps = 18/210 (8%) Query: 119 SPASWACSPNLRC---FTFDRGDISRFPPARPGSLGVMEYYLMDAASLLPVLAL---GLQ 172 +P W +P C F +R + P +Y+ +A+S+LPV AL G Sbjct: 58 APYGWTLTPIPWCEEGFWIERDNEDALPLGSTAEHLSGLFYIQEASSMLPVAALFADGNA 117 Query: 173 PGDIVLDLCAAPGGKTLAL-LQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDG-NQ 230 P V+D+ AAPG KT + + + AN+ S SR+ K+LH+ + R G + Sbjct: 118 P-QRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRV----KVLHANIS---RCGISN 169 Query: 231 VRVTSWDGRKWGELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQ 290 V +T +DGR +G + +D +L+D PC+ + + ++ + K + Q + Q + Sbjct: 170 VALTHFDGRVFGAAVPEMFDAILLDAPCSGE--GVVRKDPDALKNWSPESNQEIAATQRE 227 Query: 291 LLAAGLLATKPGGHVVYSTCSLSHLQNEYV 320 L+ + A +PGG +VYSTC+L+ +NE V Sbjct: 228 LIDSAFHALRPGGTLVYSTCTLNQEENEAV 257 >6ELZ-q nrPDB Length = 618 Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 63/180 (35%), Positives = 101/180 (56%), Gaps = 22/180 (12%) Query: 155 YYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTL---ALLQ-TGCCRNLAANDLSPSRI 210 Y L A+S LPV+AL + +LD+ AAPGGKT A+++ TGC + AND + SR Sbjct: 327 YILQAASSFLPVIALDPHENERILDMAAAPGGKTTYISAMMKNTGC---VFANDANKSRT 383 Query: 211 ARLQKILHSYVPEEIRDG-NQVRVTSWDGRKWGELEGDTYDRVLVDVPCTTDRHSLHEEE 269 L +H R G V ++D R++ ++ G +DR+L+D PC+ + +++ Sbjct: 384 KSLIANIH-------RLGCTNTIVCNYDAREFPKVIG-GFDRILLDAPCSG-TGVIGKDQ 434 Query: 270 NNIFKRSRKKERQILPVLQVQLLAAGLLA----TKPGGHVVYSTCSLSHLQNEYVVQGAI 325 + R+ K QI P LQ QLL + + + +K GG +VYSTCS++ ++E V+ A+ Sbjct: 435 SVKVSRTEKDFIQI-PHLQKQLLLSAIDSVDCNSKHGGVIVYSTCSVAVEEDEAVIDYAL 493 >3M6U-A nrPDB Length = 464 Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 55/175 (31%), Positives = 83/175 (47%), Gaps = 24/175 (13%) Query: 155 YYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLAL-LQTGCCRNLAANDLSPSRIARL 213 YY+ + ++ + L +PG+ VLDL AAPGGKT L + G L AN++ R+ L Sbjct: 83 YYIQEPSAQAVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGL 142 Query: 214 QKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDRVLVDVPCTTDRHSLHEEENNIF 273 + + + G + VT R E G + RVL+D PC+ + +F Sbjct: 143 LENVERW-------GAPLAVTQAPPRALAEAFGTYFHRVLLDAPCSGE---------GMF 186 Query: 274 KRSRKKERQILPV-------LQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVV 321 ++ R+ R P +Q LLA PGG +VYSTC+ + +NE VV Sbjct: 187 RKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAPEENEGVV 241 >2YXL-A nrPDB Length = 450 Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 55/167 (32%), Positives = 86/167 (51%), Gaps = 16/167 (9%) Query: 157 LMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCR-NLAANDLSPSRIARLQK 215 + + AS + + L +PG+ V+DL AAPGGKT L + + + A D+ R+ RL+ Sbjct: 243 VQEEASAVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKD 302 Query: 216 ILHSYVPEEIRDGNQ-VRVTSWDGRKWGELEGDTY-DRVLVDVPCTTDRHSLHEEENNIF 273 + R G + V+ D RK E+ G+ D+VL+D PCT+ E Sbjct: 303 FVK-------RMGIKIVKPLVKDARKAPEIIGEEVADKVLLDAPCTSSGTIGKNPE---- 351 Query: 274 KRSRKKERQI--LPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNE 318 R R +E +I + LQ +LL + KPGG ++Y+TCS+ +NE Sbjct: 352 LRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKEENE 398 >1SQG-A nrPDB Length = 429 Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 52/175 (29%), Positives = 85/175 (48%), Gaps = 10/175 (5%) Query: 157 LMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKI 216 + DA++ + L Q G+ +LDLCAAPGGKT +L+ + A D+ R++R+ Sbjct: 230 VQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDN 289 Query: 217 LHSYVPEEIRDGNQVRVTSWDGRKWGELEGD-TYDRVLVDVPCTTDRHSLHEEENNIFKR 275 L R G + V DGR + G+ +DR+L+D PC+ + +R Sbjct: 290 LK-------RLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRR 342 Query: 276 SRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQGAIELLAN 330 R L LQ ++L A K GG +VY+TCS+ +N ++ ++ A+ Sbjct: 343 DRDIPE--LAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTAD 395 >3AJD-A nrPDB Length = 274 Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 56/192 (29%), Positives = 96/192 (50%), Gaps = 34/192 (17%) Query: 147 PGSLGVMEYYLM------DAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCR-N 199 P S+G YL +S++P + L + D +LD+CAAPGGKT L Q + Sbjct: 51 PFSIGSTPEYLFGYYMPQSISSMIPPIVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGT 110 Query: 200 LAANDLSPSRIARLQKILHSYVPEEIRDG--NQVRVTSWDGRKWGE--LEGDT-YDRVLV 254 + A ++S +R L+ ++ R G N + + + D RK+ + L+ + +D++L+ Sbjct: 111 IVAVEISKTRTKALKSNIN-------RMGVLNTI-IINADMRKYKDYLLKNEIFFDKILL 162 Query: 255 DVPCT----TDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTC 310 D PC+ D++ EE+ + R+KE L+ G+ K G +VYSTC Sbjct: 163 DAPCSGNIIKDKNRNVSEEDIKYCSLRQKE----------LIDIGIDLLKKDGELVYSTC 212 Query: 311 SLSHLQNEYVVQ 322 S+ +NE V++ Sbjct: 213 SMEVEENEEVIK 224 >5WWT-A nrPDB Length = 477 Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 59/188 (31%), Positives = 89/188 (47%), Gaps = 34/188 (18%) Query: 156 YLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQK 215 +L + S L L QPG+ +LDLCAAPGGKT ++AA + L K Sbjct: 217 FLQNLPSALVSHVLNPQPGEKILDLCAAPGGKT---------THIAALMHDQGEVIALDK 267 Query: 216 ILHSYVPEEIRDG------NQVRVTSWDGRKWGEL------EG------DTYDRVLVDVP 257 I + E+I+ N +R +DG K +L EG +++DR+L+D P Sbjct: 268 IFNKV--EKIKQNALLLGLNSIRAFCFDGTKAVKLDMVEDTEGEPPFLPESFDRILLDAP 325 Query: 258 CTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQN 317 C+ + + N S K+ P LQ +L A + KP G +VYSTC+++ +N Sbjct: 326 CS----GMGQRPNMACTWSVKEVASYQP-LQRKLFTAAVQLLKPEGVLVYSTCTITLAEN 380 Query: 318 EYVVQGAI 325 E V A+ Sbjct: 381 EEQVAWAL 388 >3M4X-A nrPDB Length = 456 Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 49/199 (24%), Positives = 90/199 (45%), Gaps = 33/199 (16%) Query: 156 YLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRN-LAANDLSPSRIARLQ 214 Y + ++++ A +PG+ VLDLCAAPGGK+ L + L N++ P R L Sbjct: 88 YSQEPSAMIVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILS 147 Query: 215 K----------ILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDRVLVDVPCTTDRHS 264 + I+ ++ P E+ V + G +DR++VD PC+ + Sbjct: 148 ENIERWGVSNAIVTNHAPAEL-------VPHFSG---------FFDRIVVDAPCSGE--G 189 Query: 265 LHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQGA 324 + ++ N K ++ Q ++L++ + K G ++YSTC+ + +NE + Sbjct: 190 MFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAPEENEEI---- 245 Query: 325 IELLANQYSIQVQVEDLTH 343 I L Y + ++ LT Sbjct: 246 ISWLVENYPVTIEEIPLTQ 264 >5ZVG-B nrPDB Length = 384 Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 19/168 (11%) Query: 155 YYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCR-NLAANDLSPSRIARL 213 +Y S++ L + D+++D+ AAPGGKT + Q + + A D S +R+ ++ Sbjct: 179 FYPQGLPSMVTARVLEPKEDDVIIDMAAAPGGKTTHIAQLLENKGEIIAIDKSKNRLRKM 238 Query: 214 QKILHSYVPEEIRDG-NQVRVTSWDGRKWGELEGDTYDRVLVDVPCTT--DRHSLHEEEN 270 ++ + R G V++ D RK +L G D++L+D PCT R L EE Sbjct: 239 EENIK-------RLGVKNVKLVQMDARKLPDL-GIKADKILLDAPCTALGVRPKLWEERT 290 Query: 271 NIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNE 318 K + Q + A + + + GG +VYSTC+LS+ +NE Sbjct: 291 -------LKHIEATARYQRAFIWAAIKSLRRGGVLVYSTCTLSYEENE 331 >2B9E-A nrPDB Length = 309 Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 59/195 (30%), Positives = 84/195 (43%), Gaps = 21/195 (10%) Query: 138 DISRFPPARPGSLGVMEYYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKT---LALLQT 194 D+ P R G L L D AS LP + L PG V+D CAAPG KT ALL+ Sbjct: 72 DLHEHPLYRAGHL-----ILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKN 126 Query: 195 GCCRNLAANDLSPSRIARLQKILHSYVPE--EIRDGNQVRVTSWDGRKWGELEGDTYDRV 252 + A DL R+A + +L E+ + + + V+ D R + E+ + Sbjct: 127 Q--GKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPR-YHEVH-----YI 178 Query: 253 LVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPG-GHVVYSTCS 311 L+D C+ + E L Q + L L T P +VYSTCS Sbjct: 179 LLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHAL--TFPSLQRLVYSTCS 236 Query: 312 LSHLQNEYVVQGAIE 326 L +NE VV+ A++ Sbjct: 237 LCQEENEDVVRDALQ 251 >3P9C-A nrPDB Length = 364 Score = 29.3 bits (64), Expect = 2.8, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 5/61 (8%) Query: 177 VLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSY-----VPEEIRDGNQV 231 +L++ A GGK+L + AAN +P + R+ ++L SY + EE +DG Sbjct: 45 LLEILVAAGGKSLTPTEVAAKLPSAANPEAPDMVDRILRLLASYNVVTCLVEEGKDGRLS 104 Query: 232 R 232 R Sbjct: 105 R 105 >1U0L-A nrPDB Length = 301 Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust. Identities = 12/32 (37%), Positives = 17/32 (53%) Query: 328 LANQYSIQVQVEDLTHFRRVFMDTFCFFSSCQ 359 AN ++ E+L H+ + F D CFFS C Sbjct: 231 FANLEINDIEPEELKHYFKEFGDKQCFFSDCN 262 >1ZQ9-A nrPDB Length = 285 Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust. Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 2/46 (4%) Query: 170 GLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQK 215 L+P D+VL++ G T+ LL+ + + A +L P +A L K Sbjct: 25 ALRPTDVVLEVGPGTGNMTVKLLEKA--KKVVACELDPRLVAELHK 68 >4QMD-A nrPDB Length = 193 Score = 28.1 bits (61), Expect = 6.4, Method: Compositional matrix adjust. Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 8/87 (9%) Query: 254 VDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLS 313 ++ P T R S+ E ++ +LP LQVQ L GL+ K G + LS Sbjct: 85 IEDPVTKKRLSVGE----AVQKGWMPRESVLPHLQVQHLTGGLIDPKRTGRIPIQQALLS 140 Query: 314 HLQNEYVVQGAIELLANQYSIQVQVED 340 + +E + Q LL ++ S + + D Sbjct: 141 GMISEELAQ----LLQDESSYEKDLTD 163 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4FZV-A nrPDB 612 e-176 2FRX-A nrPDB 243 1e-64 1IXK-A nrPDB 216 2e-56 3M6U-A nrPDB 204 4e-53 3M4X-A nrPDB 202 2e-52 1SQG-A nrPDB 201 4e-52 3AJD-A nrPDB 190 8e-49 6ELZ-q nrPDB 189 1e-48 2B9E-A nrPDB 188 5e-48 2YXL-A nrPDB 184 7e-47 5ZVG-B nrPDB 173 8e-44 5WWT-A nrPDB 168 3e-42 Sequences not found previously or not previously below threshold: 1WXW-A nrPDB 53 2e-07 2AS0-A nrPDB 44 8e-05 4DMG-A nrPDB 42 3e-04 3TMA-A nrPDB 42 5e-04 1NT2-A nrPDB 41 0.001 2PWY-A nrPDB 37 0.015 3A26-A nrPDB 36 0.026 3MGG-A nrPDB 35 0.045 1N2X-A nrPDB 35 0.074 1EIZ-A nrPDB 34 0.10 1O54-A nrPDB 34 0.14 3AXS-A nrPDB 33 0.21 3CCF-A nrPDB 32 0.30 1UWV-A nrPDB 32 0.33 2IH5-A nrPDB 32 0.43 3UFB-A nrPDB 32 0.47 5GM1-A nrPDB 32 0.55 3V8V-A nrPDB 32 0.56 2ESR-A nrPDB 32 0.59 6GKZ-A nrPDB 31 0.69 3PM6-A nrPDB 31 0.81 3ORH-A nrPDB 31 1.0 3A3K-A nrPDB 30 1.2 1K7J-A nrPDB 30 1.2 5OQL-R nrPDB 30 1.2 2RUS-A nrPDB 30 1.3 6BHC-A nrPDB 30 1.5 5LLK-A nrPDB 30 1.5 5DGX-A nrPDB 30 1.7 3EEY-A nrPDB 30 1.9 3MQ2-A nrPDB 30 2.1 2DUL-A nrPDB 30 2.2 3C0K-A nrPDB 29 2.6 1YB2-A nrPDB 29 2.7 3N0L-A nrPDB 29 3.0 4AYX-A nrPDB 29 3.0 4FW9-A nrPDB 29 3.2 3CJR-A nrPDB 29 3.3 2VS1-A nrPDB 29 3.3 6CU3-A nrPDB 29 3.4 3H7F-A nrPDB 29 3.6 4YRY-A nrPDB 29 3.7 5X9V-A nrPDB 29 4.3 4FWV-A nrPDB 29 4.7 2DKJ-A nrPDB 29 5.0 6EPB-A nrPDB 29 5.4 1KR5-A nrPDB 28 6.4 1JSX-A nrPDB 28 7.7 4L69-A nrPDB 28 8.9 >4FZV-A nrPDB Length = 359 Score = 612 bits (1578), Expect = e-176, Method: Composition-based stats. Identities = 359/359 (100%), Positives = 359/359 (100%) Query: 26 RYKKKWAATEPKFPAVRLALQNFDMTYSVQFGDLWPSIRVSLLSEQKYGALVNNFAAWDH 85 RYKKKWAATEPKFPAVRLALQNFDMTYSVQFGDLWPSIRVSLLSEQKYGALVNNFAAWDH Sbjct: 1 RYKKKWAATEPKFPAVRLALQNFDMTYSVQFGDLWPSIRVSLLSEQKYGALVNNFAAWDH 60 Query: 86 VSAKLEQLSAKDFVNEAISHWELQSEGGQSAAPSPASWACSPNLRCFTFDRGDISRFPPA 145 VSAKLEQLSAKDFVNEAISHWELQSEGGQSAAPSPASWACSPNLRCFTFDRGDISRFPPA Sbjct: 61 VSAKLEQLSAKDFVNEAISHWELQSEGGQSAAPSPASWACSPNLRCFTFDRGDISRFPPA 120 Query: 146 RPGSLGVMEYYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDL 205 RPGSLGVMEYYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDL Sbjct: 121 RPGSLGVMEYYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDL 180 Query: 206 SPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDRVLVDVPCTTDRHSL 265 SPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDRVLVDVPCTTDRHSL Sbjct: 181 SPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDRVLVDVPCTTDRHSL 240 Query: 266 HEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQGAI 325 HEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQGAI Sbjct: 241 HEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQGAI 300 Query: 326 ELLANQYSIQVQVEDLTHFRRVFMDTFCFFSSCQVGELVIPNLMANFGPMYFCKMRRLT 384 ELLANQYSIQVQVEDLTHFRRVFMDTFCFFSSCQVGELVIPNLMANFGPMYFCKMRRLT Sbjct: 301 ELLANQYSIQVQVEDLTHFRRVFMDTFCFFSSCQVGELVIPNLMANFGPMYFCKMRRLT 359 >2FRX-A nrPDB Length = 479 Score = 243 bits (619), Expect = 1e-64, Method: Composition-based stats. Identities = 61/229 (26%), Positives = 102/229 (44%), Gaps = 18/229 (7%) Query: 119 SPASWACSPNLRC---FTFDRGDISRFPPARPGSLGVMEYYLMDAASLLPVLAL--GLQP 173 +P W +P C F +R + P +Y+ +A+S+LPV AL Sbjct: 58 APYGWTLTPIPWCEEGFWIERDNEDALPLGSTAEHLSGLFYIQEASSMLPVAALFADGNA 117 Query: 174 GDIVLDLCAAPGGKTLAL-LQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVR 232 V+D+ AAPG KT + + + AN+ S SR+ L + V Sbjct: 118 PQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGIS------NVA 171 Query: 233 VTSWDGRKWGELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLL 292 +T +DGR +G + +D +L+D PC+ + + ++ + K + Q + Q +L+ Sbjct: 172 LTHFDGRVFGAAVPEMFDAILLDAPCSGEG--VVRKDPDALKNWSPESNQEIAATQRELI 229 Query: 293 AAGLLATKPGGHVVYSTCSLSHLQNEYVVQGAIELLANQYSIQVQVEDL 341 + A +PGG +VYSTC+L+ +NE V L Y V+ L Sbjct: 230 DSAFHALRPGGTLVYSTCTLNQEENEAVCLW----LKETYPDAVEFLPL 274 >1IXK-A nrPDB Length = 315 Score = 216 bits (549), Expect = 2e-56, Method: Composition-based stats. Identities = 66/225 (29%), Positives = 108/225 (48%), Gaps = 25/225 (11%) Query: 142 FPPARPGSLGVMEYYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCC-RNL 200 F Y+ +A+S+ P +AL +PG+IV D+ AAPGGKT L Q + Sbjct: 87 FSITSTPEFLTGLIYIQEASSMYPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVI 146 Query: 201 AANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDRVLVDVPCTT 260 A D+ +R+ + L V + GEL + +D++L+D PCT Sbjct: 147 YAFDVDENRLRETRLNLSRLGVL------NVILFHSSSLHIGELNVE-FDKILLDAPCTG 199 Query: 261 DRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYV 320 ++H+ + R+ + + LQ++LL GL KPGG +VYSTCSL +NE+V Sbjct: 200 SG-TIHKNPERKWNRTMD-DIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEFV 257 Query: 321 VQGAIE--------------LLANQYSIQVQVEDLTHFRRVFMDT 351 +Q A++ L N + I++ E++ + RR++ D Sbjct: 258 IQWALDNFDVELLPLKYGEPALTNPFGIELS-EEIKNARRLYPDV 301 >3M6U-A nrPDB Length = 464 Score = 204 bits (520), Expect = 4e-53, Method: Composition-based stats. Identities = 60/222 (27%), Positives = 94/222 (42%), Gaps = 15/222 (6%) Query: 107 ELQSEGGQSAAPSPASWACSPNLRCFTFDRGDISRFPPARPGSLGVMEYYLMDAASLLPV 166 +L E Q +P W P C P P YY+ + ++ Sbjct: 40 KLPPEAFQRISP----WPLRPIPWCQEGFYYPEEARPGPHPF-FYAGLYYIQEPSAQAVG 94 Query: 167 LALGLQPGDIVLDLCAAPGGKTLAL-LQTGCCRNLAANDLSPSRIARLQKILHSYVPEEI 225 + L +PG+ VLDL AAPGGKT L + G L AN++ R+ L + + + Sbjct: 95 VLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERW----- 149 Query: 226 RDGNQVRVTSWDGRKWGELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILP 285 G + VT R E G + RVL+D PC+ + + ++ + + + Sbjct: 150 --GAPLAVTQAPPRALAEAFGTYFHRVLLDAPCSGEG--MFRKDREAARHWGPSAPKRMA 205 Query: 286 VLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQGAIEL 327 +Q LLA PGG +VYSTC+ + +NE VV ++ Sbjct: 206 EVQKALLAQASRLLGPGGVLVYSTCTFAPEENEGVVAHFLKA 247 >3M4X-A nrPDB Length = 456 Score = 202 bits (514), Expect = 2e-52, Method: Composition-based stats. Identities = 45/200 (22%), Positives = 87/200 (43%), Gaps = 13/200 (6%) Query: 145 ARPGSLGVMEYYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNL-AAN 203 + Y + ++++ A +PG+ VLDLCAAPGGK+ L + L N Sbjct: 77 GKSFLHQAGYEYSQEPSAMIVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTN 136 Query: 204 DLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDRVLVDVPCTTDRH 263 ++ P R L + + + VT+ + +DR++VD PC+ + Sbjct: 137 EIFPKRAKILSENIERWGVS------NAIVTNHAPAELVPHFSGFFDRIVVDAPCSGEG- 189 Query: 264 SLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQG 323 + ++ N K ++ Q ++L++ + K G ++YSTC+ + +NE ++ Sbjct: 190 -MFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAPEENEEII-- 246 Query: 324 AIELLANQYSIQVQVEDLTH 343 L Y + ++ LT Sbjct: 247 --SWLVENYPVTIEEIPLTQ 264 >1SQG-A nrPDB Length = 429 Score = 201 bits (511), Expect = 4e-52, Method: Composition-based stats. Identities = 52/175 (29%), Positives = 85/175 (48%), Gaps = 10/175 (5%) Query: 157 LMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKI 216 + DA++ + L Q G+ +LDLCAAPGGKT +L+ + A D+ R++R+ Sbjct: 230 VQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDN 289 Query: 217 LHSYVPEEIRDGNQVRVTSWDGRKWGELEGD-TYDRVLVDVPCTTDRHSLHEEENNIFKR 275 L R G + V DGR + G+ +DR+L+D PC+ + +R Sbjct: 290 LK-------RLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRR 342 Query: 276 SRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQGAIELLAN 330 R L LQ ++L A K GG +VY+TCS+ +N ++ ++ A+ Sbjct: 343 DRDIPE--LAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTAD 395 >3AJD-A nrPDB Length = 274 Score = 190 bits (483), Expect = 8e-49, Method: Composition-based stats. Identities = 55/230 (23%), Positives = 103/230 (44%), Gaps = 32/230 (13%) Query: 146 RPGSLGVMEYYL------MDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRN 199 P S+G YL +S++P + L + D +LD+CAAPGGKT L Q + Sbjct: 50 SPFSIGSTPEYLFGYYMPQSISSMIPPIVLNPREDDFILDMCAAPGGKTTHLAQLMKNKG 109 Query: 200 -LAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGEL---EGDTYDRVLVD 255 + A ++S +R L+ ++ + + D RK+ + +D++L+D Sbjct: 110 TIVAVEISKTRTKALKSNINRMGVL------NTIIINADMRKYKDYLLKNEIFFDKILLD 163 Query: 256 VPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHL 315 PC+ + + + +++ + + Q +L+ G+ K G +VYSTCS+ Sbjct: 164 APCSGNIIK------DKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVE 217 Query: 316 QNEYVVQGAIELL---------ANQY-SIQVQVEDLTHFRRVFMDTFCFF 355 +NE V++ ++ AN++ I ++ + RVF FF Sbjct: 218 ENEEVIKYILQKRNDVELIIIKANEFKGINIKEGYIKGTLRVFPPNEPFF 267 >6ELZ-q nrPDB Length = 618 Score = 189 bits (481), Expect = 1e-48, Method: Composition-based stats. Identities = 65/234 (27%), Positives = 105/234 (44%), Gaps = 30/234 (12%) Query: 140 SRFPPARPGSLGVMEYYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRN 199 S+ P Y L A+S LPV+AL + +LD+ AAPGGKT + Sbjct: 312 SQVPIGATPEYLAGHYILQAASSFLPVIALDPHENERILDMAAAPGGKTTYISAMMKNTG 371 Query: 200 -LAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDRVLVDVPC 258 + AND + SR L +H V ++D R++ ++ G +DR+L+D PC Sbjct: 372 CVFANDANKSRTKSLIANIHRLGC------TNTIVCNYDAREFPKVIG-GFDRILLDAPC 424 Query: 259 TTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLAT----KPGGHVVYSTCSLSH 314 + + ++++ R+ K QI P LQ QLL + + + K GG +VYSTCS++ Sbjct: 425 SGTG-VIGKDQSVKVSRTEKDFIQI-PHLQKQLLLSAIDSVDCNSKHGGVIVYSTCSVAV 482 Query: 315 LQNEYVVQGAIELLAN----QYSIQVQVEDLTH------------FRRVFMDTF 352 ++E V+ A+ N + + E T RR + T+ Sbjct: 483 EEDEAVIDYALRKRPNVKLVDTGLAIGKEAFTSYRGKKFHPSVKLARRYYPHTY 536 >2B9E-A nrPDB Length = 309 Score = 188 bits (476), Expect = 5e-48, Method: Composition-based stats. Identities = 56/193 (29%), Positives = 78/193 (40%), Gaps = 17/193 (8%) Query: 138 DISRFPPARPGSLGVMEYYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCC 197 D+ P R G L L D AS LP + L PG V+D CAAPG KT L Sbjct: 72 DLHEHPLYRAGHL-----ILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKN 126 Query: 198 -RNLAANDLSPSRIARLQKILHSYVPE--EIRDGNQVRVTSWDGRKWGELEGDTYDRVLV 254 + A DL R+A + +L E+ + + + V+ D R +L+ Sbjct: 127 QGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRY------HEVHYILL 180 Query: 255 DVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPG-GHVVYSTCSLS 313 D C+ + E L Q + L L T P +VYSTCSL Sbjct: 181 DPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHAL--TFPSLQRLVYSTCSLC 238 Query: 314 HLQNEYVVQGAIE 326 +NE VV+ A++ Sbjct: 239 QEENEDVVRDALQ 251 >2YXL-A nrPDB Length = 450 Score = 184 bits (466), Expect = 7e-47, Method: Composition-based stats. Identities = 53/177 (29%), Positives = 88/177 (49%), Gaps = 12/177 (6%) Query: 153 MEYYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCR-NLAANDLSPSRIA 211 + + + AS + + L +PG+ V+DL AAPGGKT L + + + A D+ R+ Sbjct: 239 GKIIVQEEASAVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMK 298 Query: 212 RLQKILHSYVPEEIRDGNQ-VRVTSWDGRKWGELEGDTY-DRVLVDVPCTTDRHSLHEEE 269 RL+ + R G + V+ D RK E+ G+ D+VL+D PCT+ E Sbjct: 299 RLKDFVK-------RMGIKIVKPLVKDARKAPEIIGEEVADKVLLDAPCTSSGTIGKNPE 351 Query: 270 NNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQGAIE 326 R R+ + + LQ +LL + KPGG ++Y+TCS+ +NE ++ + Sbjct: 352 LRW--RLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKEENEKNIRWFLN 406 >5ZVG-B nrPDB Length = 384 Score = 173 bits (439), Expect = 8e-44, Method: Composition-based stats. Identities = 45/190 (23%), Positives = 88/190 (46%), Gaps = 18/190 (9%) Query: 153 MEYYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCR-NLAANDLSPSRIA 211 +Y S++ L + D+++D+ AAPGGKT + Q + + A D S +R+ Sbjct: 177 GYFYPQGLPSMVTARVLEPKEDDVIIDMAAAPGGKTTHIAQLLENKGEIIAIDKSKNRLR 236 Query: 212 RLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDRVLVDVPCTTDRHSLHEEENN 271 ++++ + V++ D RK +L G D++L+D PCT Sbjct: 237 KMEENIKRLGV------KNVKLVQMDARKLPDL-GIKADKILLDAPCTALGV-----RPK 284 Query: 272 IFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQGAIELLANQ 331 +++ K + Q + A + + + GG +VYSTC+LS+ +NE V+ I Sbjct: 285 LWEERTLKHIEATARYQRAFIWAAIKSLRRGGVLVYSTCTLSYEENEGNVKFMIRK---- 340 Query: 332 YSIQVQVEDL 341 ++++ + + Sbjct: 341 -GMKLEEQSI 349 >5WWT-A nrPDB Length = 477 Score = 168 bits (426), Expect = 3e-42, Method: Composition-based stats. Identities = 56/193 (29%), Positives = 87/193 (45%), Gaps = 30/193 (15%) Query: 149 SLGVMEYYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPS 208 S+ +L + S L L QPG+ +LDLCAAPGGKT + A Sbjct: 210 SVLPRYLFLQNLPSALVSHVLNPQPGEKILDLCAAPGGKTTHIA---------ALMHDQG 260 Query: 209 RIARLQKILHSYVPEE---IRDG-NQVRVTSWDGRKWGELE------------GDTYDRV 252 + L KI + + + G N +R +DG K +L+ +++DR+ Sbjct: 261 EVIALDKIFNKVEKIKQNALLLGLNSIRAFCFDGTKAVKLDMVEDTEGEPPFLPESFDRI 320 Query: 253 LVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSL 312 L+D PC+ + + N S K+ P LQ +L A + KP G +VYSTC++ Sbjct: 321 LLDAPCSG----MGQRPNMACTWSVKEVASYQP-LQRKLFTAAVQLLKPEGVLVYSTCTI 375 Query: 313 SHLQNEYVVQGAI 325 + +NE V A+ Sbjct: 376 TLAENEEQVAWAL 388 >1WXW-A nrPDB Length = 382 Score = 52.8 bits (125), Expect = 2e-07, Method: Composition-based stats. Identities = 28/138 (20%), Positives = 50/138 (36%), Gaps = 20/138 (14%) Query: 174 GDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRV 233 G+ LD+ + GG L L R + A D S + R ++ +R + Sbjct: 210 GERALDVFSYAGGFALHLA--LGFREVVAVDSSAEALRRAEENARLNGLGNVRV---LEA 264 Query: 234 TSWDGRKWGELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLA 293 ++D + E EG+ +D V++D P E +K + Sbjct: 265 NAFDLLRRLEKEGERFDLVVLDPPAFAKGKKDVERAYRAYKEVNLR-------------- 310 Query: 294 AGLLATKPGGHVVYSTCS 311 + K GG + ++CS Sbjct: 311 -AIKLLKEGGILATASCS 327 >2AS0-A nrPDB Length = 396 Score = 44.4 bits (103), Expect = 8e-05, Method: Composition-based stats. Identities = 32/140 (22%), Positives = 54/140 (38%), Gaps = 18/140 (12%) Query: 172 QPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQV 231 QPGD VLD+ GG + + D SP I ++ E+ + Sbjct: 216 QPGDRVLDVFTYTGGFAIH-AAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRM--KFI 272 Query: 232 RVTSWDGRKWGELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQL 291 ++++ + + +G+ +D V++D P HE++ R V Sbjct: 273 VGSAFEEMEKLQKKGEKFDIVVLDPP----AFVQHEKDLKAGLR---------AYFNVNF 319 Query: 292 LAAGLLATKPGGHVVYSTCS 311 AGL K GG +V +CS Sbjct: 320 --AGLNLVKDGGILVTCSCS 337 >4DMG-A nrPDB Length = 393 Score = 42.4 bits (98), Expect = 3e-04, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 47/143 (32%), Gaps = 30/143 (20%) Query: 172 QPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQV 231 +PG+ VLD+ + GG AL A D + L + +R G +V Sbjct: 213 RPGERVLDVYSYVGG--FALRAARKGAYALAVDKDLEALGVLDQ-------AALRLGLRV 263 Query: 232 RVTSWDGRKWGELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQL 291 + + + VL+D P + K + LP ++ L Sbjct: 264 DIRHGEALPTLRGLEGPFHHVLLDPP------------------TLVKRPEELPAMKRHL 305 Query: 292 LA---AGLLATKPGGHVVYSTCS 311 + L G + S+CS Sbjct: 306 VDLVREALRLLAEEGFLWLSSCS 328 >3TMA-A nrPDB Length = 354 Score = 41.7 bits (96), Expect = 5e-04, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 63/219 (28%), Gaps = 43/219 (19%) Query: 139 ISRFPPARPGSLGVMEYYLMDAASLLPVLALGLQPGDIVLDLCAAP--GGKTLAL---LQ 193 ++ P +R + L + + +PG VLD P G T+AL Sbjct: 169 LTERPLSRRFPKAALRGSLTPVLAQALLRLADARPGMRVLD----PFTGSGTIALEAAST 224 Query: 194 TGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDRVL 253 G + A DL R+ ++ + IR D R + DR+L Sbjct: 225 LGPTSPVYAGDLDEKRLGLAREAALASGLSWIRF------LRADARHLPRFFPE-VDRIL 277 Query: 254 VDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLS 313 + P L +E L L PGG V T Sbjct: 278 ANPP---HGLRLGRKEGLFHLYW-------------DFLRGALALLPPGGRVALLT---- 317 Query: 314 HLQNEYVVQGAIELLANQYSIQVQVEDLTHFRRVFMDTF 352 ++ A+ A ++ + V+ F Sbjct: 318 -------LRPALLKRALPPGFALRHARVVEQGGVYPRVF 349 >1NT2-A nrPDB Length = 210 Score = 40.5 bits (93), Expect = 0.001, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 37/98 (37%), Gaps = 10/98 (10%) Query: 160 AASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHS 219 AA +L L L+ + VL L AA G L + A + S +L +++ Sbjct: 44 AAMILKGHRLKLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELV-- 101 Query: 220 YVPEEIRDGNQVRVTSWDGRKWGELEG--DTYDRVLVD 255 R+ N + +D K + G + D + D Sbjct: 102 ------RERNNIIPLLFDASKPWKYSGIVEKVDLIYQD 133 >2PWY-A nrPDB Length = 258 Score = 37.0 bits (84), Expect = 0.015, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 3/74 (4%) Query: 152 VMEYYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLA-ANDLSPSRI 210 Y DA++++ L L PG VL+ GG TL L + + L + + P + Sbjct: 77 ATPTYPKDASAMV--TLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHL 134 Query: 211 ARLQKILHSYVPEE 224 A+ ++ + ++ E Sbjct: 135 AQAERNVRAFWQVE 148 >3A26-A nrPDB Length = 301 Score = 36.3 bits (82), Expect = 0.026, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 36/84 (42%), Gaps = 8/84 (9%) Query: 171 LQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQ 230 +P ++V+D+ A G +L + G + + A + P L + +H + ++ Sbjct: 146 AKPDELVVDMFAGIGHLSLPIAVYGKAK-VIAIEKDPYTFKFLVENIHLN-----KVEDR 199 Query: 231 VRVTSWDGRKWGELEGDTYDRVLV 254 + + D R + DR+L+ Sbjct: 200 MSAYNMDNRDFPGEN--IADRILM 221 >3MGG-A nrPDB Length = 276 Score = 35.1 bits (79), Expect = 0.045, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 48/159 (30%), Gaps = 40/159 (25%) Query: 172 QPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQV 231 PG VL+ G +T+ L + + + D+SP + + ++ V Sbjct: 36 PPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGI------KNV 89 Query: 232 RVTSWDGRKWGELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQV-- 289 + + E ++D + V C +L LQ Sbjct: 90 KFLQANIFSLP-FEDSSFDHIFV---C-----------------------FVLEHLQSPE 122 Query: 290 QLLAAGLLATKPGGHVV-----YSTCSLSHLQNEYVVQG 323 + L + KPGG + + +C + + Sbjct: 123 EALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAW 161 >1N2X-A nrPDB Length = 301 Score = 34.7 bits (78), Expect = 0.074, Method: Composition-based stats. Identities = 24/181 (13%), Positives = 59/181 (32%), Gaps = 8/181 (4%) Query: 169 LGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDG 228 L + I+LD GG + A+L+ + D+ + ++ L + Sbjct: 22 LKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFK 81 Query: 229 NQVRVTSWDGRKWGELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQ 288 R + L + D +L+D+ + EN F R++ + L+ Sbjct: 82 VSYREADF---LLKTLGIEKVDGILMDL---GVSTYQLKGENRGFTFEREEPLDMRMDLE 135 Query: 289 VQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQGAIELLANQYSIQVQVEDLTHFRRVF 348 ++ A +L P + + + + + + + + ++ + R Sbjct: 136 SEVTAQKVLNELPEEEL--ARIIFEYGEEKRFARRIARKIVENRPLNTTLDLVKAVREAL 193 Query: 349 M 349 Sbjct: 194 P 194 >1EIZ-A nrPDB Length = 180 Score = 34.0 bits (76), Expect = 0.10, Method: Composition-based stats. Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Query: 172 QPGDIVLDLCAAPGGKTLALL-QTGCCRNLAANDLSPS 208 +PG V+DL AAPGG + ++ Q G + A DL P Sbjct: 21 KPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPM 58 >1O54-A nrPDB Length = 277 Score = 33.6 bits (75), Expect = 0.14, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 33/98 (33%), Gaps = 10/98 (10%) Query: 162 SLLPVLALGLQPGDIVLDLCAAPGGKTLALLQ-TGCCRNLAANDLSPSRIARLQKILHSY 220 S + L ++ GD ++D G L + G + A + + L + Sbjct: 101 SSFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKW 160 Query: 221 VPEEIRDGNQVRVTSWDGRKWGELEGDT-YDRVLVDVP 257 E R +V R E + D + +DVP Sbjct: 161 GLIE-RVTIKV-------RDISEGFDEKDVDALFLDVP 190 >3AXS-A nrPDB Length = 392 Score = 33.2 bits (74), Expect = 0.21, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 4/82 (4%) Query: 176 IVLDLCAAPGGKTLA-LLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVT 234 V D +A G + + LL+T C AND+S I +++ E R Sbjct: 55 KVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEA 114 Query: 235 SWDGRKWGELEGDTYDRVLVDV 256 ++ RK E G +D V +D Sbjct: 115 NFFLRK--EW-GFGFDYVDLDP 133 >3CCF-A nrPDB Length = 279 Score = 32.4 bits (72), Expect = 0.30, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 3/45 (6%) Query: 168 ALGLQPGDIVLDLCAAPGGKTLALLQTGCC---RNLAANDLSPSR 209 L QPG+ +LDL G T + Q+G + AA + +R Sbjct: 52 LLNPQPGEFILDLGCGTGQLTEKIAQSGAEVLGTDNAATMIEKAR 96 >1UWV-A nrPDB Length = 433 Score = 32.4 bits (72), Expect = 0.33, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 33/104 (31%), Gaps = 13/104 (12%) Query: 168 ALGLQPGDIVLDLCAAPGGKT----LALLQTGCCRNLAANDLSPSRIARLQKILHSYVPE 223 L +QP D VLDL G T + A + ARL + + Sbjct: 281 WLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYH 340 Query: 224 EIRDGNQVRVTSWDGRKWGELEGDTYDRVLVDVPCTTDRHSLHE 267 E + + + + +D+VL+D + + Sbjct: 341 ENLEEDVTKQP---------WAKNGFDKVLLDPARAGAAGVMQQ 375 >2IH5-A nrPDB Length = 421 Score = 32.0 bits (71), Expect = 0.43, Method: Composition-based stats. Identities = 12/72 (16%), Positives = 21/72 (29%), Gaps = 15/72 (20%) Query: 246 GDTYDRVLVDVPCTTDRHSLHEE----------ENNIFKRSRKKERQILPVLQVQLLAAG 295 G+ +D +L + P + F + K L Sbjct: 96 GEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGA-----FLEKA 150 Query: 296 LLATKPGGHVVY 307 + KPGG +V+ Sbjct: 151 VRLLKPGGVLVF 162 >3UFB-A nrPDB Length = 530 Score = 32.0 bits (71), Expect = 0.47, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 54/168 (32%), Gaps = 28/168 (16%) Query: 152 VMEYYLMDAASLLPVLALGLQPGDIVLDLCAAPGG-------------KTLALLQTGCCR 198 E+Y V + Q G+ VLD GG KT+ + Sbjct: 196 SGEFYTPRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQES 255 Query: 199 NLAANDLS--PSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDRVLVDV 256 ++ + P + ++ +LH I N +R + R+ G+ D D +L + Sbjct: 256 SIFGGEAKSLPYLLVQMNLLLHGLEYPRIDPENSLR---FPLREMGD--KDRVDVILTNP 310 Query: 257 PCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGH 304 P + E + ++ Q + L + K GH Sbjct: 311 PFGGE-------EEKGILGNFPEDMQ-TAETAMLFLQLIMRKLKRPGH 350 >5GM1-A nrPDB Length = 297 Score = 31.6 bits (70), Expect = 0.55, Method: Composition-based stats. Identities = 28/169 (16%), Positives = 51/169 (30%), Gaps = 36/169 (21%) Query: 142 FPPARP----GSLGVMEYYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCC 197 FPP P L M D + + L + G +LD+ G +T Sbjct: 42 FPPDAPVPQDMELVTMSSQAQDRYTDYLIETLDPKAGQHLLDIGCGTG-RTALKAARQRG 100 Query: 198 RNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDRVLVDVP 257 + +S +IA ++ + E ++ D + E +++D Sbjct: 101 IAVTGVAVSKEQIAAANRLAAGHGLTE-----RLTFEVADAMRLP-YEDESFD------- 147 Query: 258 CTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVV 306 C SL + + + L KPGG ++ Sbjct: 148 CAWAIESLCHMD------------------RAKALGEAWRVLKPGGDLL 178 >3V8V-A nrPDB Length = 702 Score = 31.6 bits (70), Expect = 0.56, Method: Composition-based stats. Identities = 22/135 (16%), Positives = 45/135 (33%), Gaps = 18/135 (13%) Query: 174 GDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRV 233 G L+L + G T+ G R+ D+S + + ++ L G R+ Sbjct: 539 GKDFLNLFSYTGSATVH-AGLGGARSTTTVDMSRTYLEWAERNLRLNGLT----GRAHRL 593 Query: 234 TSWDGRKWGELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLA 293 D W + +D + +D P R ++ + + L+ Sbjct: 594 IQADCLAWLREANEQFDLIFIDPP-------------TFSNSKRMEDAFDVQRDHLALMK 640 Query: 294 AGLLATKPGGHVVYS 308 + GG +++S Sbjct: 641 DLKRLLRAGGTIMFS 655 >2ESR-A nrPDB Length = 177 Score = 31.6 bits (70), Expect = 0.59, Method: Composition-based stats. Identities = 22/147 (14%), Positives = 46/147 (31%), Gaps = 6/147 (4%) Query: 173 PGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVR 232 G VLDL A GG + + G + + + A +Q + + N+ Sbjct: 31 NGGRVLDLFAGSGGLAIEAVSRGMSAAVL-VEKNRKAQAIIQDNI-----IMTKAENRFT 84 Query: 233 VTSWDGRKWGELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLL 292 + + + + +D V +D P + E ++ + + LL Sbjct: 85 LLKMEAERAIDCLTGRFDLVFLDPPYAKETIVATIEALAAKNLLSEQVMVVCETDKTVLL 144 Query: 293 AAGLLATKPGGHVVYSTCSLSHLQNEY 319 + +Y ++ NE Sbjct: 145 PKEIATLGIWKEKIYGISKVTVYVNEG 171 >6GKZ-A nrPDB Length = 351 Score = 31.3 bits (69), Expect = 0.69, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 32/83 (38%), Gaps = 8/83 (9%) Query: 172 QPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQV 231 Q G VLDL G TL + Q + A S S+ Y+ EE R N + Sbjct: 122 QDGQSVLDLGCGQGALTLHVAQKYKNCRVTAVTNSVSQ--------KEYIEEESRRRNLL 173 Query: 232 RVTSWDGRKWGELEGDTYDRVLV 254 V +TYDR+LV Sbjct: 174 NVEVKLADITTHEMAETYDRILV 196 >3PM6-A nrPDB Length = 306 Score = 31.3 bits (69), Expect = 0.81, Method: Composition-based stats. Identities = 13/93 (13%), Positives = 28/93 (30%), Gaps = 7/93 (7%) Query: 242 GELEGDTYDRVLVDVP-CTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATK 300 E +D ++VD+ + + + E + +R + P Sbjct: 107 SETHEPGFDSIMVDMSHFSKEENLRLTRELVAYCNARGIATEAEPGRIEGGEDGVQDTVD 166 Query: 301 PGGHVVYSTCSLSHLQNEYVVQGAIELLANQYS 333 G + + ++E V I LA + Sbjct: 167 LEGVLT------TPEESEEFVATGINWLAPAFG 193 >3ORH-A nrPDB Length = 236 Score = 30.9 bits (68), Expect = 1.0, Method: Composition-based stats. Identities = 26/149 (17%), Positives = 45/149 (30%), Gaps = 44/149 (29%) Query: 180 LCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGR 239 L AA K +L+ G +AA+ + + + E DG R+ W R Sbjct: 53 LAAAASSKGGRVLEVGFGMAIAAS-------KVQEAPIDEHWIIECNDGVFQRLRDWAPR 105 Query: 240 KWGELEGDT--------------YDRVLVDV-PCTTDRHSLHEEENNIFKRSRKKERQIL 284 + ++ +D +L D P + + H+ Sbjct: 106 QTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIK------------ 153 Query: 285 PVLQVQLLAAGLLATKPGGHVVYSTCSLS 313 KPGG + Y C+L+ Sbjct: 154 --------NHAFRLLKPGGVLTY--CNLT 172 >3A3K-A nrPDB Length = 435 Score = 30.5 bits (67), Expect = 1.2, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 42/133 (31%), Gaps = 11/133 (8%) Query: 182 AAPGGK-TLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRK 240 AAP G+ T A + + + P ++ G+ V Sbjct: 90 AAPVGRFTAHWRVPLLTAGAPALGIG---VKDEYALTTRTGPSHVKLGDFVTALHRRLGW 146 Query: 241 WGELEGDTYDRVLVDVPC--TTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLA 298 + DR+ D PC + + E + ++ + P +LL A Sbjct: 147 EHQALVLYADRLGDDRPCFFIVEGLYMRVRERLNITVNHQEFVEGDPDHYPKLL----RA 202 Query: 299 TKPGGHVVYSTCS 311 + G V+Y CS Sbjct: 203 VRRKGRVIY-ICS 214 >1K7J-A nrPDB Length = 206 Score = 30.5 bits (67), Expect = 1.2, Method: Composition-based stats. Identities = 7/22 (31%), Positives = 12/22 (54%) Query: 288 QVQLLAAGLLATKPGGHVVYST 309 Q +L+ + + GG +VY T Sbjct: 13 QQRLINQAVEIVRKGGVIVYPT 34 >5OQL-R nrPDB Length = 313 Score = 30.5 bits (67), Expect = 1.2, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 21/71 (29%), Gaps = 9/71 (12%) Query: 172 QPGDIVLDLCAAPGGKTLALLQ-TGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQ 230 +PG VL L AA G + G + A + S L + Sbjct: 151 KPGSKVLYLGAASGTSVSHVADIVGPTGAVYAVEFSHRSGRDLINMATRR--------TN 202 Query: 231 VRVTSWDGRKW 241 V D RK Sbjct: 203 VIPIVEDARKP 213 >2RUS-A nrPDB Length = 490 Score = 30.5 bits (67), Expect = 1.3, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 17/43 (39%) Query: 341 LTHFRRVFMDTFCFFSSCQVGELVIPNLMANFGPMYFCKMRRL 383 +T RR F D F + G + P + CKM RL Sbjct: 296 ITTARRRFPDNFLHYHRAGHGAVTSPQSKRGYTAFVHCKMARL 338 >6BHC-A nrPDB Length = 438 Score = 30.1 bits (66), Expect = 1.5, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 11/61 (18%) Query: 118 PSPASWACSPNLRCFTFDRGDISRFPPARPGSLGVMEYYLMDAASLLPVLALGLQPGDIV 177 P+P +P L+ + R D+ R P P S G L AS L L P + + Sbjct: 293 PNPFDE--NPELKEREYTRADLPRIPFRSPYSRG-----LQQLASCL----LNPNPSERI 341 Query: 178 L 178 L Sbjct: 342 L 342 >5LLK-A nrPDB Length = 266 Score = 30.1 bits (66), Expect = 1.5, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 18/38 (47%) Query: 146 RPGSLGVMEYYLMDAASLLPVLALGLQPGDIVLDLCAA 183 + S+ +E Y D + L V PG++V CAA Sbjct: 98 QTSSVFSIEVYPEDHSELQSVHTASPDPGEVVSSACAA 135 >5DGX-A nrPDB Length = 256 Score = 30.1 bits (66), Expect = 1.7, Method: Composition-based stats. Identities = 25/172 (14%), Positives = 65/172 (37%), Gaps = 9/172 (5%) Query: 164 LPVLALGLQPGDIVLDLCAAPGGKTLALL-----QTGCCRNLAANDLSPSRIARLQKILH 218 L +++ ++ G V + + GKT T + + + + + L Sbjct: 34 LSGVSVDIKAGQTVAFVGKSGSGKTTLTSIISRFYTQHEGEILLDGVDTRELT--LENLR 91 Query: 219 SYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRK 278 S++ ++ + T ++ +G L + + ++D + + +E ++ + Sbjct: 92 SHLSIVSQNVHLFDDTVYNNIAFG-LSREVSEEEVIDALKRANAYEFVQELSDGINTNIG 150 Query: 279 KERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHL-QNEYVVQGAIELLA 329 L Q Q ++ K +++ + + ++E VVQ A+E L Sbjct: 151 NNGSKLSGGQRQRISIARALLKNAPVLIFDEATSALDNESERVVQQALESLT 202 >3EEY-A nrPDB Length = 197 Score = 30.1 bits (66), Expect = 1.9, Method: Composition-based stats. Identities = 29/155 (18%), Positives = 49/155 (31%), Gaps = 24/155 (15%) Query: 172 QPGDIVLDLCAAPGGKTLALLQT-GCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQ 230 + GD V+D G T L G + D+ IA K L ++ ++ Sbjct: 21 KEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLT-----DLNLIDR 75 Query: 231 VRVTSWDGRKWGELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQ 290 V + DG D+ +D P +L + P +Q Sbjct: 76 VTLI-KDGH-------QNMDK-YIDCPVKAVMFNLGYLPSG------DHSISTRPETTIQ 120 Query: 291 LLAAGLLATKPGG---HVVYSTCSLSHLQNEYVVQ 322 L+ + GG V+Y + E V++ Sbjct: 121 ALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLE 155 >3MQ2-A nrPDB Length = 218 Score = 29.7 bits (65), Expect = 2.1, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 20/46 (43%) Query: 169 LGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQ 214 L Q D+VLD+ G + + R + A D SR+ ++ Sbjct: 23 LRSQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKIS 68 >2DUL-A nrPDB Length = 378 Score = 29.7 bits (65), Expect = 2.2, Method: Composition-based stats. Identities = 15/102 (14%), Positives = 35/102 (34%), Gaps = 9/102 (8%) Query: 164 LPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPE 223 + V+ L + IVLD +A G + + + ND+S +++ + Sbjct: 38 IVVVLLNILNPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDG 97 Query: 224 EIRD---------GNQVRVTSWDGRKWGELEGDTYDRVLVDV 256 E+R+ + + D + + + +D Sbjct: 98 ELRESKGRAILKGEKTIVINHDDANRLMAERHRYFHFIDLDP 139 >3C0K-A nrPDB Length = 396 Score = 29.3 bits (64), Expect = 2.6, Method: Composition-based stats. Identities = 20/139 (14%), Positives = 48/139 (34%), Gaps = 17/139 (12%) Query: 173 PGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVR 232 VL+ + GG ++ G C + + D S + ++ + ++ VR Sbjct: 220 ENKRVLNCFSYTGGFAVS-ALMGGCSQVVSVDTSQEALDIARQNVELN-KLDLSKAEFVR 277 Query: 233 VTSWDGRKWGELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLL 292 + + G+ +D +++D P + ++ + R K + Sbjct: 278 DDVFKLLRTYRDRGEKFDVIVMDPP----KFVENKSQLMGACRGYKDINML--------- 324 Query: 293 AAGLLATKPGGHVVYSTCS 311 + GG ++ +CS Sbjct: 325 --AIQLLNEGGILLTFSCS 341 >1YB2-A nrPDB Length = 275 Score = 29.3 bits (64), Expect = 2.7, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 40/116 (34%), Gaps = 8/116 (6%) Query: 143 PPARPGSLGVMEYYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALL-QTGCCRNLA 201 P + + + + ++ GL+PG +L++ G + +L L Sbjct: 80 PMYFGRVIRRNTQIISEIDASYIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLT 139 Query: 202 ANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDRVLVDVP 257 + + + L E D VR + D + + YD V+ D+P Sbjct: 140 VVERDEDNLKKAMDNL-----SEFYDIGNVRTSRSDIADF--ISDQMYDAVIADIP 188 >3N0L-A nrPDB Length = 417 Score = 29.3 bits (64), Expect = 3.0, Method: Composition-based stats. Identities = 15/89 (16%), Positives = 30/89 (33%), Gaps = 6/89 (6%) Query: 173 PGDIVLDLCAAPGGKTLALLQTGCCRNLAA-----NDLSPS-RIARLQKILHSYVPEEIR 226 PGD +L + + GG + + +L ++++I P+ I Sbjct: 110 PGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVELDGRIDYEKVREIAKKEKPKLIV 169 Query: 227 DGNQVRVTSWDGRKWGELEGDTYDRVLVD 255 G D K+ E+ + + D Sbjct: 170 CGASAYARVIDFAKFREIADEIGAYLFAD 198 >4AYX-A nrPDB Length = 595 Score = 29.3 bits (64), Expect = 3.0, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 29/71 (40%), Gaps = 1/71 (1%) Query: 267 EEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHL-QNEYVVQGAI 325 F ++ +L Q Q +A K ++ + + +NEY+VQ A+ Sbjct: 467 RNFPQGFNTVVGEKGVLLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEYLVQEAL 526 Query: 326 ELLANQYSIQV 336 + L + ++ V Sbjct: 527 DRLMDGRTVLV 537 >4FW9-A nrPDB Length = 732 Score = 29.3 bits (64), Expect = 3.2, Method: Composition-based stats. Identities = 24/176 (13%), Positives = 52/176 (29%), Gaps = 14/176 (7%) Query: 136 RGDISRFPPARP--GSLGVMEYYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQ 193 RG + P G + YL + P L + + + + P G+ + L + Sbjct: 44 RGGFHAYLVGPPSLGKHEALLAYLSTQSVETPPDLLYVPLSERKVAVMTLPSGQEIHLAE 103 Query: 194 TGCCRNLAANDLSP--SRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDR 251 L N L + + L++ + Q+ + ++ G +R Sbjct: 104 AVEGLLLEVNRLDELFRQGSFLREKTQLEARFKEAREQQLEALRREAQEAGFALSTNGER 163 Query: 252 VLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVY 307 + + P +R +E + + L L + + Y Sbjct: 164 LELTGP----------GPVPAELSARLEEVTLGSLAASAELEVALRRLRRDWALHY 209 >3CJR-A nrPDB Length = 254 Score = 29.0 bits (63), Expect = 3.3, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 22/60 (36%), Gaps = 2/60 (3%) Query: 163 LLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVP 222 L LA L+PGD VLDL G LA+ D+ P + + + Sbjct: 110 ALKALARHLRPGDKVLDLGT--GSGVLAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGV 167 >2VS1-A nrPDB Length = 425 Score = 29.0 bits (63), Expect = 3.3, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 35/99 (35%), Gaps = 12/99 (12%) Query: 173 PGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVR 232 G+ +LD+ + G + L + G ++ +AR +++ E Sbjct: 290 EGEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARRNVEINNVDAE--------- 340 Query: 233 VTSWDGRKWGELEGDTYDRVLVDVPCTTDRHSLHEEENN 271 ++ E+ +D V+VD P L + N Sbjct: 341 ---FEVASDREVSVKGFDTVIVDPPRAGLHPRLVKRLNR 376 >6CU3-A nrPDB Length = 336 Score = 29.0 bits (63), Expect = 3.4, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 35/96 (36%), Gaps = 6/96 (6%) Query: 267 EEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCS--LSHLQNEYVVQGA 324 E+ + I +LQ +L+A +PGG++ C+ + +++ + Sbjct: 120 EKVDIIISEWMGYFLLYESMLQT-VLSARDRWLRPGGYLFPDKCTMYICGIEDSEYKRDK 178 Query: 325 IELLANQYSIQVQVEDLTHFRRVFMDTFCFFSSCQV 360 I+ N Y R +D F S Q+ Sbjct: 179 IDFWDNVYGFNFSAIKADALREPLVD---FVESQQI 211 >3H7F-A nrPDB Length = 447 Score = 29.0 bits (63), Expect = 3.6, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 32/95 (33%), Gaps = 17/95 (17%) Query: 173 PGDIVLDLCAAPGGKTLALLQTGCCRNLAAN------------DLSPSRIARLQKILHSY 220 PG+ +L L A GG ++ L N D+ R L+ + Sbjct: 130 PGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDPATHLIDMDAVRATALE-----F 184 Query: 221 VPEEIRDGNQVRVTSWDGRKWGELEGDTYDRVLVD 255 P+ I G D + + + ++LVD Sbjct: 185 RPKVIIAGWSAYPRVLDFAAFRSIADEVGAKLLVD 219 >4YRY-A nrPDB Length = 276 Score = 29.0 bits (63), Expect = 3.7, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 24/67 (35%), Gaps = 4/67 (5%) Query: 132 FTFDRGDISRFPPARPGSLGVMEYYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLAL 191 F +S+ ARPG V+ L + +P+ +P + + + GKT Sbjct: 22 FWIHSPSVSKE--ARPGQFVVIR--LHEKGERIPLTVADTKPEEGLFRMVVKVVGKTTHE 77 Query: 192 LQTGCCR 198 L Sbjct: 78 LSLKKEG 84 >5X9V-A nrPDB Length = 521 Score = 28.6 bits (62), Expect = 4.3, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 35/102 (34%), Gaps = 5/102 (4%) Query: 194 TGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDRVL 253 T + + AR+ + E+ DG G L + +++L Sbjct: 54 TNDGVTILTLMDAQHPAARMVVNMARAQEREVGDGTTTAAV-----LAGALVSEGVNQIL 108 Query: 254 VDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAG 295 VP + ++ N+ RK ++ + +LLAA Sbjct: 109 KGVPVSKVLAGMNRALNHALFLIRKNAIKVGSITDDRLLAAA 150 >4FWV-A nrPDB Length = 355 Score = 28.6 bits (62), Expect = 4.7, Method: Composition-based stats. Identities = 24/176 (13%), Positives = 52/176 (29%), Gaps = 14/176 (7%) Query: 136 RGDISRFPPARP--GSLGVMEYYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQ 193 RG + P G + YL + P L + + + + P G+ + L + Sbjct: 12 RGGFHAYLVGPPSLGKHEALLAYLSTQSVETPPDLLYVPLSERKVAVMTLPSGQEIHLAE 71 Query: 194 TGCCRNLAANDLSP--SRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDR 251 L N L + + L++ + Q+ + ++ G +R Sbjct: 72 AVEGLLLEVNRLDELFRQGSFLREKTQLEARFKEAREQQLEALRREAQEAGFALSTNGER 131 Query: 252 VLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVY 307 + + P +R +E + + L L + + Y Sbjct: 132 LELTGP----------GPVPAELSARLEEVTLGSMAASAELEVALRRLRRDWALHY 177 >2DKJ-A nrPDB Length = 407 Score = 28.6 bits (62), Expect = 5.0, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 41/102 (40%), Gaps = 8/102 (7%) Query: 161 ASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAAN-------DLSPSRIARL 213 A++ +AL ++PGD ++ + A GG + L D + + Sbjct: 97 ANMAVYMAL-MEPGDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRPDTELIDLEEV 155 Query: 214 QKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDRVLVD 255 +++ + P+ I G WD + + E+ + ++VD Sbjct: 156 RRLALEHRPKVIVAGASAYPRFWDFKAFREIADEVGAYLVVD 197 >6EPB-A nrPDB Length = 423 Score = 28.6 bits (62), Expect = 5.4, Method: Composition-based stats. Identities = 26/82 (31%), Positives = 28/82 (34%), Gaps = 7/82 (8%) Query: 134 FDRGDISRFPPARPGSLGVMEYYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLA--- 190 FD DI PA M L + S L A PG L AAP GK Sbjct: 163 FDGIDIDWEYPADATQASNMILLLKEVRSQLDAYAAQYAPGYHFLLTIAAPAGKDNYSKL 222 Query: 191 ----LLQTGCCRNLAANDLSPS 208 L Q NL A D + S Sbjct: 223 RLADLGQVLDYINLMAYDYAGS 244 >1KR5-A nrPDB Length = 226 Score = 28.2 bits (61), Expect = 6.4, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 41/136 (30%), Gaps = 33/136 (24%) Query: 172 QPGDIVLDLCAAPGGKTLALLQT-GCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQ 230 G LD+ + G T + GC + D + + P + G + Sbjct: 76 HEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSG-R 134 Query: 231 VRVTSWDGRKWGELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQ 290 V++ DGR G E YD + V PV+ Sbjct: 135 VQLVVGDGR-MGYAEEAPYDAIHVGA--------------------------AAPVVPQA 167 Query: 291 LLAAGLLATKPGGHVV 306 L+ KPGG ++ Sbjct: 168 LIDQ----LKPGGRLI 179 >1JSX-A nrPDB Length = 207 Score = 27.8 bits (60), Expect = 7.7, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 31/93 (33%), Gaps = 11/93 (11%) Query: 157 LMDAASLLPVLALGL---QP---GDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRI 210 + D +L L P G+ +D+ PG + L + D R+ Sbjct: 43 VRDPNEMLVRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRV 102 Query: 211 ARLQKI-----LHSYVPEEIRDGNQVRVTSWDG 238 L+++ L + P + R +DG Sbjct: 103 RFLRQVQHELKLENIEPVQSRVEEFPSEPPFDG 135 >4L69-A nrPDB Length = 263 Score = 27.8 bits (60), Expect = 8.9, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 26/62 (41%), Gaps = 6/62 (9%) Query: 150 LGVMEYYLM----DAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDL 205 + + + A+ VL L + + ++D+ AA G +L G +A ++L Sbjct: 153 VLSTPMLVQRVREEVAAGAAVLVLHEEATERIVDIAAAQAG--SLMLVVGPEGGIAPDEL 210 Query: 206 SP 207 + Sbjct: 211 AA 212 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.313 0.127 0.362 Lambda K H 0.267 0.0393 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 14,484,037 Number of Sequences: 36641 Number of extensions: 556224 Number of successful extensions: 1668 Number of sequences better than 10.0: 63 Number of HSP's better than 10.0 without gapping: 38 Number of HSP's successfully gapped in prelim test: 46 Number of HSP's that attempted gapping in prelim test: 1556 Number of HSP's gapped (non-prelim): 87 length of query: 384 length of database: 10,336,785 effective HSP length: 99 effective length of query: 285 effective length of database: 6,709,326 effective search space: 1912157910 effective search space used: 1912157910 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 60 (27.8 bits)