BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= Q96C86
         (337 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

1XMM-B nrPDB                                                          692   0.0  
5OSY-A nrPDB                                                          616   e-177
1VLR-A nrPDB                                                          607   e-174
5BV3-A nrPDB                                                          143   1e-34
2VBI-A nrPDB                                                           31   0.96 
3OA3-A nrPDB                                                           29   2.4  
4V7F-o nrPDB                                                           28   4.6  
5D6H-A nrPDB                                                           28   4.8  
6QAO-A nrPDB                                                           28   5.6  
5C24-B nrPDB                                                           28   7.2  
4HLJ-A nrPDB                                                           28   8.3  

>1XMM-B nrPDB
          Length = 342

 Score =  692 bits (1785), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/337 (100%), Positives = 337/337 (100%)

Query: 1   MADAAPQLGKRKRELDVEEAHAASTEEKEAGVGNGTCAPVRLPFSGFRLQKVLRESARDK 60
           MADAAPQLGKRKRELDVEEAHAASTEEKEAGVGNGTCAPVRLPFSGFRLQKVLRESARDK
Sbjct: 6   MADAAPQLGKRKRELDVEEAHAASTEEKEAGVGNGTCAPVRLPFSGFRLQKVLRESARDK 65

Query: 61  IIFLHGKVNEASGDGDGEDAVVILEKTPFQVEQVAQLLTGSPELQLQFSNDIYSTYHLFP 120
           IIFLHGKVNEASGDGDGEDAVVILEKTPFQVEQVAQLLTGSPELQLQFSNDIYSTYHLFP
Sbjct: 66  IIFLHGKVNEASGDGDGEDAVVILEKTPFQVEQVAQLLTGSPELQLQFSNDIYSTYHLFP 125

Query: 121 PRQLNDVKTTVVYPATEKHLQKYLRQDLRLIRETGDDYRNITLPHLESQSLSIQWVYNIL 180
           PRQLNDVKTTVVYPATEKHLQKYLRQDLRLIRETGDDYRNITLPHLESQSLSIQWVYNIL
Sbjct: 126 PRQLNDVKTTVVYPATEKHLQKYLRQDLRLIRETGDDYRNITLPHLESQSLSIQWVYNIL 185

Query: 181 DKKAEADRIVFENPDPSDGFVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPL 240
           DKKAEADRIVFENPDPSDGFVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPL
Sbjct: 186 DKKAEADRIVFENPDPSDGFVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPL 245

Query: 241 LRNILHQGQEAILQRYRMKGDHLRVYLHYLPSYYHLHVHFTALGFEAPGSGVERAHLLAE 300
           LRNILHQGQEAILQRYRMKGDHLRVYLHYLPSYYHLHVHFTALGFEAPGSGVERAHLLAE
Sbjct: 246 LRNILHQGQEAILQRYRMKGDHLRVYLHYLPSYYHLHVHFTALGFEAPGSGVERAHLLAE 305

Query: 301 VIENLECDPRHYQQRTLTFALRADDPLLKLLQEAQQS 337
           VIENLECDPRHYQQRTLTFALRADDPLLKLLQEAQQS
Sbjct: 306 VIENLECDPRHYQQRTLTFALRADDPLLKLLQEAQQS 342


>5OSY-A nrPDB
          Length = 301

 Score =  616 bits (1588), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 300/301 (99%), Positives = 300/301 (99%)

Query: 37  CAPVRLPFSGFRLQKVLRESARDKIIFLHGKVNEASGDGDGEDAVVILEKTPFQVEQVAQ 96
            APVRLPFSGFRLQKVLRESARDKIIFLHGKVNEASGDGDGEDAVVILEKTPFQVEQVAQ
Sbjct: 1   SAPVRLPFSGFRLQKVLRESARDKIIFLHGKVNEASGDGDGEDAVVILEKTPFQVEQVAQ 60

Query: 97  LLTGSPELQLQFSNDIYSTYHLFPPRQLNDVKTTVVYPATEKHLQKYLRQDLRLIRETGD 156
           LLTGSPELQLQFSNDIYSTYHLFPPRQLNDVKTTVVYPATEKHLQKYLRQDLRLIRETGD
Sbjct: 61  LLTGSPELQLQFSNDIYSTYHLFPPRQLNDVKTTVVYPATEKHLQKYLRQDLRLIRETGD 120

Query: 157 DYRNITLPHLESQSLSIQWVYNILDKKAEADRIVFENPDPSDGFVLIPDLKWNQQQLDDL 216
           DYRNITLPHLESQSLSIQWVYNILDKKAEADRIVFENPDPSDGFVLIPDLKWNQQQLDDL
Sbjct: 121 DYRNITLPHLESQSLSIQWVYNILDKKAEADRIVFENPDPSDGFVLIPDLKWNQQQLDDL 180

Query: 217 YLIAICHRRGIRSLRDLTPEHLPLLRNILHQGQEAILQRYRMKGDHLRVYLHYLPSYYHL 276
           YLIAICHRRGIRSLRDLTPEHLPLLRNILHQGQEAILQRYRMKGDHLRVYLHYLPSYYHL
Sbjct: 181 YLIAICHRRGIRSLRDLTPEHLPLLRNILHQGQEAILQRYRMKGDHLRVYLHYLPSYYHL 240

Query: 277 HVHFTALGFEAPGSGVERAHLLAEVIENLECDPRHYQQRTLTFALRADDPLLKLLQEAQQ 336
           HVHFTALGFEAPGSGVERAHLLAEVIENLECDPRHYQQRTLTFALRADDPLLKLLQEAQQ
Sbjct: 241 HVHFTALGFEAPGSGVERAHLLAEVIENLECDPRHYQQRTLTFALRADDPLLKLLQEAQQ 300

Query: 337 S 337
           S
Sbjct: 301 S 301


>1VLR-A nrPDB
          Length = 350

 Score =  607 bits (1565), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 294/326 (90%), Positives = 308/326 (94%), Gaps = 1/326 (0%)

Query: 1   MADAAPQLGKRKRELDVEEAHAASTEEKEAGVGNGTCAPVRLPFSGFRLQKVLRESARDK 60
           MAD APQL KRKRE + EEA   STEEKEAGVGNGT APVRLPFSGFR+QKVLRESARDK
Sbjct: 13  MADTAPQL-KRKREQEAEEAETPSTEEKEAGVGNGTSAPVRLPFSGFRVQKVLRESARDK 71

Query: 61  IIFLHGKVNEASGDGDGEDAVVILEKTPFQVEQVAQLLTGSPELQLQFSNDIYSTYHLFP 120
           IIFLHGKVNE SGD  GEDAVVILEKTPFQVE VAQLLTGSPEL+LQFSNDIYSTY+LFP
Sbjct: 72  IIFLHGKVNEDSGDTHGEDAVVILEKTPFQVEHVAQLLTGSPELKLQFSNDIYSTYNLFP 131

Query: 121 PRQLNDVKTTVVYPATEKHLQKYLRQDLRLIRETGDDYRNITLPHLESQSLSIQWVYNIL 180
           PR L+D+KTTVVYPATEKHLQKY+RQDLRLIRETGDDYR ITLP+LESQSLSIQWVYNIL
Sbjct: 132 PRHLSDIKTTVVYPATEKHLQKYMRQDLRLIRETGDDYRTITLPYLESQSLSIQWVYNIL 191

Query: 181 DKKAEADRIVFENPDPSDGFVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPL 240
           DKKAEADRIVFENPDPSDGFVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPL
Sbjct: 192 DKKAEADRIVFENPDPSDGFVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPL 251

Query: 241 LRNILHQGQEAILQRYRMKGDHLRVYLHYLPSYYHLHVHFTALGFEAPGSGVERAHLLAE 300
           LRNIL +GQEAIL+RY++ GD LRVYLHYLPSYYHLHVHFTALGFEAPGSGVERAHLLA+
Sbjct: 252 LRNILREGQEAILKRYQVTGDRLRVYLHYLPSYYHLHVHFTALGFEAPGSGVERAHLLAQ 311

Query: 301 VIENLECDPRHYQQRTLTFALRADDP 326
           VIENLECDP+HYQQRTLTFALR DDP
Sbjct: 312 VIENLECDPKHYQQRTLTFALRTDDP 337


>5BV3-A nrPDB
          Length = 345

 Score =  143 bits (361), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 96/317 (30%), Positives = 164/317 (51%), Gaps = 42/317 (13%)

Query: 47  FRLQKVLRESARDKIIFLHGKVNEASGDGDGEDAVVILEKTPFQVEQVAQ---------- 96
           F+   VL  + + K++ L G +       D +DA++  EKT F  ++  +          
Sbjct: 10  FQFVSVLDSNPQTKVMSLLGTI-------DNKDAIITAEKTHFLFDETVRRPSQDGRSTP 62

Query: 97  ----------LLTGSPELQLQFSNDIYSTYHLFPPRQLND----VKTTVVYPATEKHLQK 142
                      + G  EL+   SNDIY  + L   +Q  +     K  +++PAT  H++K
Sbjct: 63  VLYNCENEYSCINGIQELKEITSNDIY-YWGLSVIKQDMESNPTAKLNLIWPATPIHIKK 121

Query: 143 YLRQDLRLIRETGDDYRNITLPHLESQSLS--IQWVYNILDKKAEADRIV---FENPDPS 197
           Y +Q+  L+RET + Y+ I  P++E    +  ++WV NIL + AE++R+V   F   +  
Sbjct: 122 YEQQNFHLVRETPEMYKRIVQPYIEEMCNNGRLKWVNNILYEGAESERVVYKDFSEENKD 181

Query: 198 DGFVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPLLRNILHQGQEAI--LQR 255
           DGF+++PD+KW+   LD LYL+AI +R  I+++RDL       L N+ ++ +  +     
Sbjct: 182 DGFLILPDMKWDGMNLDSLYLVAIVYRTDIKTIRDLRYSDRQWLINLNNKIRSIVPGCYN 241

Query: 256 YRMKGDHLRVYLHYLPSYYHLHVHFTALGFEAPGSGVE--RAHLLAEVIENLE-CDPRHY 312
           Y +  D LR+ +HY PSYYH ++H   +     G+ +   +A LL ++IE L    P  Y
Sbjct: 242 YAVHPDELRILVHYQPSYYHFNIHIVNIKHPGLGNSIAAGKAILLEDIIEMLNYLGPEGY 301

Query: 313 QQRTLTFALRADDPLLK 329
             +T+T+A+  +  L K
Sbjct: 302 MNKTITYAIGENHDLWK 318


>2VBI-A nrPDB
          Length = 566

 Score = 30.8 bits (68), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 3/41 (7%)

Query: 138 KHLQKYLRQDLRLIRETGDDYRN---ITLPHLESQSLSIQW 175
           +H+   L  +  L+ ETGD + N   +TLP      L +QW
Sbjct: 368 RHINALLTSNTTLVAETGDSWFNAMRMTLPRGARVELEMQW 408


>3OA3-A nrPDB
          Length = 288

 Score = 29.3 bits (64), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 10/30 (33%), Positives = 19/30 (63%)

Query: 281 TALGFEAPGSGVERAHLLAEVIENLECDPR 310
           T+ GF  PG+ +E   L++ V ++L+ + R
Sbjct: 207 TSTGFNGPGASIENVSLMSAVCDSLQSETR 236


>4V7F-o nrPDB
          Length = 647

 Score = 28.5 bits (62), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 5/69 (7%)

Query: 84  LEKTPFQVEQVA--QLLTGSPELQLQFS---NDIYSTYHLFPPRQLNDVKTTVVYPATEK 138
           LE+   +V   A  +LL    E +L+     N++ +  H+  P+  +DVK T   P + K
Sbjct: 324 LEENVMEVRNKACEKLLASRIENKLKSQSRINNVLNKIHVAQPQARDDVKRTPFIPESVK 383

Query: 139 HLQKYLRQD 147
           +L+KY  +D
Sbjct: 384 NLKKYDPED 392


>5D6H-A nrPDB
          Length = 243

 Score = 28.5 bits (62), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 13/42 (30%), Positives = 20/42 (47%)

Query: 176 VYNILDKKAEADRIVFENPDPSDGFVLIPDLKWNQQQLDDLY 217
           +Y  ++   +A  +  +N   +D  V I   KWNQ  L D Y
Sbjct: 8   IYPKIEANEKATAVWLQNTGKTDAMVQIRVFKWNQDGLKDNY 49


>6QAO-A nrPDB
          Length = 508

 Score = 28.1 bits (61), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 2/48 (4%)

Query: 16  DVEEAH--AASTEEKEAGVGNGTCAPVRLPFSGFRLQKVLRESARDKI 61
           D++ AH   A  +     + N   +PV LPF G++     RE+ R  I
Sbjct: 441 DIQRAHRVVAELQAGTCFINNYNVSPVELPFGGYKKSGFGRENGRVTI 488


>5C24-B nrPDB
          Length = 412

 Score = 27.7 bits (60), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 19/120 (15%)

Query: 121 PRQLNDVKTTVVYPATEKHLQKYLRQDLRLIRETGDDYRNITLPHLESQSLSIQWVYNIL 180
           P  L   K+  V    + +    L +D R        Y   T+P + +++  I++ YN+L
Sbjct: 93  PAGLKKKKSVTVLDVGDAYFSVPLDEDFR-------KYTAFTIPSINNETPGIRYQYNVL 145

Query: 181 DKKAEADRIVFENPDPSDGFVLIPDLKWNQ-----QQLDDLYLIAIC----HRRGIRSLR 231
            +  +    +F++   S   +L P  K N      Q +DDLY+ +      HR  I  LR
Sbjct: 146 PQGWKGSPAIFQS---SMTKILEPFKKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELR 202


>4HLJ-A nrPDB
          Length = 240

 Score = 27.7 bits (60), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 16/72 (22%)

Query: 152 RETGDDYRNITLPH-LESQSLSIQWV----------YNILDKKA-----EADRIVFENPD 195
           RE G+   ++  P  L S S+ + W           Y IL + +     E+D +VFE   
Sbjct: 13  RELGNAVLHLHNPTVLSSSSIEVHWTVDQQSQYIQGYKILYRPSGANHGESDWLVFEVRT 72

Query: 196 PSDGFVLIPDLK 207
           P+   V+IPDL+
Sbjct: 73  PAKNSVVIPDLR 84


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

1XMM-B nrPDB                                                          614   e-176
1VLR-A nrPDB                                                          577   e-165
5OSY-A nrPDB                                                          542   e-155
5BV3-A nrPDB                                                          412   e-115

Sequences not found previously or not previously below threshold:

3EWB-X nrPDB                                                           33   0.22 
6D03-A nrPDB                                                           32   0.29 
4EXN-A nrPDB                                                           30   1.0  
4WJL-A nrPDB                                                           30   1.4  
1O7F-A nrPDB                                                           30   1.5  
4F7Z-A nrPDB                                                           30   1.6  
5C24-A nrPDB                                                           29   2.5  
5OY5-A nrPDB                                                           29   3.2  
4GW9-A nrPDB                                                           29   3.2  
5C24-B nrPDB                                                           28   6.5  


CONVERGED!
>1XMM-B nrPDB
          Length = 342

 Score =  614 bits (1584), Expect = e-176,   Method: Composition-based stats.
 Identities = 337/337 (100%), Positives = 337/337 (100%)

Query: 1   MADAAPQLGKRKRELDVEEAHAASTEEKEAGVGNGTCAPVRLPFSGFRLQKVLRESARDK 60
           MADAAPQLGKRKRELDVEEAHAASTEEKEAGVGNGTCAPVRLPFSGFRLQKVLRESARDK
Sbjct: 6   MADAAPQLGKRKRELDVEEAHAASTEEKEAGVGNGTCAPVRLPFSGFRLQKVLRESARDK 65

Query: 61  IIFLHGKVNEASGDGDGEDAVVILEKTPFQVEQVAQLLTGSPELQLQFSNDIYSTYHLFP 120
           IIFLHGKVNEASGDGDGEDAVVILEKTPFQVEQVAQLLTGSPELQLQFSNDIYSTYHLFP
Sbjct: 66  IIFLHGKVNEASGDGDGEDAVVILEKTPFQVEQVAQLLTGSPELQLQFSNDIYSTYHLFP 125

Query: 121 PRQLNDVKTTVVYPATEKHLQKYLRQDLRLIRETGDDYRNITLPHLESQSLSIQWVYNIL 180
           PRQLNDVKTTVVYPATEKHLQKYLRQDLRLIRETGDDYRNITLPHLESQSLSIQWVYNIL
Sbjct: 126 PRQLNDVKTTVVYPATEKHLQKYLRQDLRLIRETGDDYRNITLPHLESQSLSIQWVYNIL 185

Query: 181 DKKAEADRIVFENPDPSDGFVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPL 240
           DKKAEADRIVFENPDPSDGFVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPL
Sbjct: 186 DKKAEADRIVFENPDPSDGFVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPL 245

Query: 241 LRNILHQGQEAILQRYRMKGDHLRVYLHYLPSYYHLHVHFTALGFEAPGSGVERAHLLAE 300
           LRNILHQGQEAILQRYRMKGDHLRVYLHYLPSYYHLHVHFTALGFEAPGSGVERAHLLAE
Sbjct: 246 LRNILHQGQEAILQRYRMKGDHLRVYLHYLPSYYHLHVHFTALGFEAPGSGVERAHLLAE 305

Query: 301 VIENLECDPRHYQQRTLTFALRADDPLLKLLQEAQQS 337
           VIENLECDPRHYQQRTLTFALRADDPLLKLLQEAQQS
Sbjct: 306 VIENLECDPRHYQQRTLTFALRADDPLLKLLQEAQQS 342


>1VLR-A nrPDB
          Length = 350

 Score =  577 bits (1486), Expect = e-165,   Method: Composition-based stats.
 Identities = 294/326 (90%), Positives = 308/326 (94%), Gaps = 1/326 (0%)

Query: 1   MADAAPQLGKRKRELDVEEAHAASTEEKEAGVGNGTCAPVRLPFSGFRLQKVLRESARDK 60
           MAD APQL KRKRE + EEA   STEEKEAGVGNGT APVRLPFSGFR+QKVLRESARDK
Sbjct: 13  MADTAPQL-KRKREQEAEEAETPSTEEKEAGVGNGTSAPVRLPFSGFRVQKVLRESARDK 71

Query: 61  IIFLHGKVNEASGDGDGEDAVVILEKTPFQVEQVAQLLTGSPELQLQFSNDIYSTYHLFP 120
           IIFLHGKVNE SGD  GEDAVVILEKTPFQVE VAQLLTGSPEL+LQFSNDIYSTY+LFP
Sbjct: 72  IIFLHGKVNEDSGDTHGEDAVVILEKTPFQVEHVAQLLTGSPELKLQFSNDIYSTYNLFP 131

Query: 121 PRQLNDVKTTVVYPATEKHLQKYLRQDLRLIRETGDDYRNITLPHLESQSLSIQWVYNIL 180
           PR L+D+KTTVVYPATEKHLQKY+RQDLRLIRETGDDYR ITLP+LESQSLSIQWVYNIL
Sbjct: 132 PRHLSDIKTTVVYPATEKHLQKYMRQDLRLIRETGDDYRTITLPYLESQSLSIQWVYNIL 191

Query: 181 DKKAEADRIVFENPDPSDGFVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPL 240
           DKKAEADRIVFENPDPSDGFVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPL
Sbjct: 192 DKKAEADRIVFENPDPSDGFVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPL 251

Query: 241 LRNILHQGQEAILQRYRMKGDHLRVYLHYLPSYYHLHVHFTALGFEAPGSGVERAHLLAE 300
           LRNIL +GQEAIL+RY++ GD LRVYLHYLPSYYHLHVHFTALGFEAPGSGVERAHLLA+
Sbjct: 252 LRNILREGQEAILKRYQVTGDRLRVYLHYLPSYYHLHVHFTALGFEAPGSGVERAHLLAQ 311

Query: 301 VIENLECDPRHYQQRTLTFALRADDP 326
           VIENLECDP+HYQQRTLTFALR DDP
Sbjct: 312 VIENLECDPKHYQQRTLTFALRTDDP 337


>5OSY-A nrPDB
          Length = 301

 Score =  542 bits (1396), Expect = e-155,   Method: Composition-based stats.
 Identities = 300/301 (99%), Positives = 300/301 (99%)

Query: 37  CAPVRLPFSGFRLQKVLRESARDKIIFLHGKVNEASGDGDGEDAVVILEKTPFQVEQVAQ 96
            APVRLPFSGFRLQKVLRESARDKIIFLHGKVNEASGDGDGEDAVVILEKTPFQVEQVAQ
Sbjct: 1   SAPVRLPFSGFRLQKVLRESARDKIIFLHGKVNEASGDGDGEDAVVILEKTPFQVEQVAQ 60

Query: 97  LLTGSPELQLQFSNDIYSTYHLFPPRQLNDVKTTVVYPATEKHLQKYLRQDLRLIRETGD 156
           LLTGSPELQLQFSNDIYSTYHLFPPRQLNDVKTTVVYPATEKHLQKYLRQDLRLIRETGD
Sbjct: 61  LLTGSPELQLQFSNDIYSTYHLFPPRQLNDVKTTVVYPATEKHLQKYLRQDLRLIRETGD 120

Query: 157 DYRNITLPHLESQSLSIQWVYNILDKKAEADRIVFENPDPSDGFVLIPDLKWNQQQLDDL 216
           DYRNITLPHLESQSLSIQWVYNILDKKAEADRIVFENPDPSDGFVLIPDLKWNQQQLDDL
Sbjct: 121 DYRNITLPHLESQSLSIQWVYNILDKKAEADRIVFENPDPSDGFVLIPDLKWNQQQLDDL 180

Query: 217 YLIAICHRRGIRSLRDLTPEHLPLLRNILHQGQEAILQRYRMKGDHLRVYLHYLPSYYHL 276
           YLIAICHRRGIRSLRDLTPEHLPLLRNILHQGQEAILQRYRMKGDHLRVYLHYLPSYYHL
Sbjct: 181 YLIAICHRRGIRSLRDLTPEHLPLLRNILHQGQEAILQRYRMKGDHLRVYLHYLPSYYHL 240

Query: 277 HVHFTALGFEAPGSGVERAHLLAEVIENLECDPRHYQQRTLTFALRADDPLLKLLQEAQQ 336
           HVHFTALGFEAPGSGVERAHLLAEVIENLECDPRHYQQRTLTFALRADDPLLKLLQEAQQ
Sbjct: 241 HVHFTALGFEAPGSGVERAHLLAEVIENLECDPRHYQQRTLTFALRADDPLLKLLQEAQQ 300

Query: 337 S 337
           S
Sbjct: 301 S 301


>5BV3-A nrPDB
          Length = 345

 Score =  412 bits (1059), Expect = e-115,   Method: Composition-based stats.
 Identities = 96/317 (30%), Positives = 164/317 (51%), Gaps = 42/317 (13%)

Query: 47  FRLQKVLRESARDKIIFLHGKVNEASGDGDGEDAVVILEKTPFQVEQVAQ---------- 96
           F+   VL  + + K++ L G +       D +DA++  EKT F  ++  +          
Sbjct: 10  FQFVSVLDSNPQTKVMSLLGTI-------DNKDAIITAEKTHFLFDETVRRPSQDGRSTP 62

Query: 97  ----------LLTGSPELQLQFSNDIYSTYHLFPPRQLND----VKTTVVYPATEKHLQK 142
                      + G  EL+   SNDIY  + L   +Q  +     K  +++PAT  H++K
Sbjct: 63  VLYNCENEYSCINGIQELKEITSNDIY-YWGLSVIKQDMESNPTAKLNLIWPATPIHIKK 121

Query: 143 YLRQDLRLIRETGDDYRNITLPHLESQSLS--IQWVYNILDKKAEADRIV---FENPDPS 197
           Y +Q+  L+RET + Y+ I  P++E    +  ++WV NIL + AE++R+V   F   +  
Sbjct: 122 YEQQNFHLVRETPEMYKRIVQPYIEEMCNNGRLKWVNNILYEGAESERVVYKDFSEENKD 181

Query: 198 DGFVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPLLRNILHQGQEAI--LQR 255
           DGF+++PD+KW+   LD LYL+AI +R  I+++RDL       L N+ ++ +  +     
Sbjct: 182 DGFLILPDMKWDGMNLDSLYLVAIVYRTDIKTIRDLRYSDRQWLINLNNKIRSIVPGCYN 241

Query: 256 YRMKGDHLRVYLHYLPSYYHLHVHFTALGFEAPGSGVE--RAHLLAEVIENLE-CDPRHY 312
           Y +  D LR+ +HY PSYYH ++H   +     G+ +   +A LL ++IE L    P  Y
Sbjct: 242 YAVHPDELRILVHYQPSYYHFNIHIVNIKHPGLGNSIAAGKAILLEDIIEMLNYLGPEGY 301

Query: 313 QQRTLTFALRADDPLLK 329
             +T+T+A+  +  L K
Sbjct: 302 MNKTITYAIGENHDLWK 318


>3EWB-X nrPDB
          Length = 293

 Score = 32.7 bits (73), Expect = 0.22,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 59/161 (36%), Gaps = 15/161 (9%)

Query: 71  ASGDGDGEDAVVILEKTPFQVEQVAQLLTG-SPELQLQFSNDIYSTYHLFPPRQL--NDV 127
           + GD +   A+    K    V  +A+ + G     +    + +    H+F        + 
Sbjct: 52  SPGDFECVKAIAKAIK-HCSVTGLARCVEGDIDRAEEALKDAVSPQIHIFLATSDVHMEY 110

Query: 128 KTTVVYP---ATEKHLQKYLRQDLRLIRETGDDYRNITLPHLESQSLSIQWVYNILDKKA 184
           K  +      A+ KH   Y RQ   +++ + +D        L      I+ V   +D  A
Sbjct: 111 KLKMSRAEVLASIKHHISYARQKFDVVQFSPEDATRSDRAFL------IEAVQTAIDAGA 164

Query: 185 EADRI--VFENPDPSDGFVLIPDLKWNQQQLDDLYLIAICH 223
               I       +P++   L  DL+   +Q DD+   + CH
Sbjct: 165 TVINIPDTVGYTNPTEFGQLFQDLRREIKQFDDIIFASHCH 205


>6D03-A nrPDB
          Length = 659

 Score = 32.3 bits (72), Expect = 0.29,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 47/115 (40%), Gaps = 16/115 (13%)

Query: 91  VEQVAQLLTGSPELQLQFSNDIYSTYHLFPPRQLNDVKTTVVYPATEKHLQKYLRQDLRL 150
           ++   +L+   PEL    +         F  +  +DV+  + Y       ++Y  Q L  
Sbjct: 469 MDTYKELIERIPELNKV-ARAAAEVAGQFVIKLTHDVELNLDY-------ERYNSQLLSF 520

Query: 151 IRETGDDYRNITLPHLESQSLSIQWVYNI---LDKKAEADRIVFENPDPSDGFVL 202
           +R+  + YR      ++   LS+QW+Y+      +        F N + +D FV+
Sbjct: 521 VRDL-NQYR----ADIKEMGLSLQWLYSARGDFFRATSRLTTDFGNAEKTDRFVM 570


>4EXN-A nrPDB
          Length = 175

 Score = 30.4 bits (67), Expect = 1.0,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 30/75 (40%)

Query: 261 DHLRVYLHYLPSYYHLHVHFTALGFEAPGSGVERAHLLAEVIENLECDPRHYQQRTLTFA 320
           + L+   HY P  Y + V +  +   A  + +++AH+    +  L          ++   
Sbjct: 29  NRLQYMKHYFPINYRIAVPYEGVLRVANITRLQKAHVSERELRYLWVLVSLNATESVMDV 88

Query: 321 LRADDPLLKLLQEAQ 335
           L    P  K LQE Q
Sbjct: 89  LLEGHPSWKYLQEVQ 103


>4WJL-A nrPDB
          Length = 719

 Score = 30.0 bits (66), Expect = 1.4,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 25/72 (34%), Gaps = 8/72 (11%)

Query: 55  ESARDKIIFLHGKVNEASGDGDGEDAVVILEKTPFQVEQVAQLLTGSPELQLQFSNDIYS 114
           E  R  ++ LH          D      ILE      E + +   G PE+++   +D   
Sbjct: 430 EGPRVPVVSLHST--------DNPAKYFILESNSMLKEAILKKKIGKPEIKILHIDDYEL 481

Query: 115 TYHLFPPRQLND 126
              L  P+   D
Sbjct: 482 PLQLSLPKDFMD 493


>1O7F-A nrPDB
          Length = 469

 Score = 30.0 bits (66), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/66 (18%), Positives = 30/66 (45%)

Query: 136 TEKHLQKYLRQDLRLIRETGDDYRNITLPHLESQSLSIQWVYNILDKKAEADRIVFENPD 195
           T +H     R+   L+R   +D++ +   + +  +  +   Y +++  +  DRI  +   
Sbjct: 127 TPRHATIVTRESSELLRIEQEDFKALWEKYRQYMAGLLAPPYGVMETGSNNDRIPDKENV 186

Query: 196 PSDGFV 201
           PS+  +
Sbjct: 187 PSEKIL 192


>4F7Z-A nrPDB
          Length = 999

 Score = 30.0 bits (66), Expect = 1.6,   Method: Composition-based stats.
 Identities = 12/66 (18%), Positives = 30/66 (45%)

Query: 136 TEKHLQKYLRQDLRLIRETGDDYRNITLPHLESQSLSIQWVYNILDKKAEADRIVFENPD 195
           T +H     R+   L+R   +D++ +   + +  +  +   Y +++  +  DRI  +   
Sbjct: 127 TPRHATIVTRESSELLRIEQEDFKALWEKYRQYMAGLLAPPYGVMETGSNNDRIPDKENV 186

Query: 196 PSDGFV 201
           PS+  +
Sbjct: 187 PSEKIL 192


>5C24-A nrPDB
          Length = 537

 Score = 29.3 bits (64), Expect = 2.5,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 69/192 (35%), Gaps = 22/192 (11%)

Query: 89  FQVEQVAQLLTGSPELQLQFSNDIYSTYHLFPPRQLNDVKTTVVYPATEKHLQKYLRQDL 148
           F +++  + L    EL  +  +       +  P  L   K+  V    + +    L +D 
Sbjct: 63  FAIKKKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDF 122

Query: 149 RLIRETGDDYRNITLPHLESQSLSIQWVYNILDKKAEADRIVFENPDPSDGFVLIPDLKW 208
           R        Y   T+P + +++  I++ YN+L +  +    +F++       +L P    
Sbjct: 123 R-------KYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTK---ILEPFAAQ 172

Query: 209 NQ-----QQLDDLYLIAIC----HRRGIRSLRDLTPEHLPLLRNILHQGQEAILQRYRMK 259
           N      Q +DDLY+ +      HR  I  LR      L        +    +   Y + 
Sbjct: 173 NPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQ---HLLRWGLTTPAKEPPFLWMGYELH 229

Query: 260 GDHLRVYLHYLP 271
            D   V    LP
Sbjct: 230 PDKWTVQPIVLP 241


>5OY5-A nrPDB
          Length = 525

 Score = 28.9 bits (63), Expect = 3.2,   Method: Composition-based stats.
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 6/52 (11%)

Query: 230 LRDLTPEHLPLLRNILHQGQEAILQRYRMKGDHLRVYL---HYLPSYYHLHV 278
           LR ++P HL  L+N+   G  A L    + G  L   +   HYLP + H  +
Sbjct: 267 LRSMSPIHLQYLKNM---GVRATLVVSLVVGGKLWGLVACHHYLPRFIHFEL 315


>4GW9-A nrPDB
          Length = 655

 Score = 28.9 bits (63), Expect = 3.2,   Method: Composition-based stats.
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 6/52 (11%)

Query: 230 LRDLTPEHLPLLRNILHQGQEAILQRYRMKGDHLRVYL---HYLPSYYHLHV 278
           LR ++P HL  L+N+   G  A L    + G  L   +   HYLP + H  +
Sbjct: 267 LRSMSPIHLQYLKNM---GVRATLVVSLVVGGKLWGLVACHHYLPRFIHFEL 315


>5C24-B nrPDB
          Length = 412

 Score = 27.7 bits (60), Expect = 6.5,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 47/125 (37%), Gaps = 27/125 (21%)

Query: 158 YRNITLPHLESQSLSIQWVYNILDKKAEADRIVFENPDPSDGFVLIPDLKWNQ-----QQ 212
           Y   T+P + +++  I++ YN+L +  +    +F++       +L P  K N      Q 
Sbjct: 123 YTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTK---ILEPFKKQNPDIVIYQY 179

Query: 213 LDDLYLIAIC----HRRGIRSLRD--LTPEHLPLLRNILHQGQEAILQRYRMKGDHLRVY 266
           +DDLY+ +      HR  I  LR   L       +              Y +  D   V 
Sbjct: 180 MDDLYVGSDLEIGQHRTKIEELRQHLLRWGLFLWM-------------GYELHPDKWTVQ 226

Query: 267 LHYLP 271
              LP
Sbjct: 227 PIVLP 231


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.309    0.135    0.374 

Lambda     K      H
   0.267   0.0416    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,625,775
Number of Sequences: 36641
Number of extensions: 564836
Number of successful extensions: 1435
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 1405
Number of HSP's gapped (non-prelim): 29
length of query: 337
length of database: 10,336,785
effective HSP length: 98
effective length of query: 239
effective length of database: 6,745,967
effective search space: 1612286113
effective search space used: 1612286113
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.2 bits)
S2: 59 (27.3 bits)