BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q96AZ6 (181 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 1WLJ-A nrPDB 369 e-103 5Z9X-A nrPDB 78 2e-15 2P1J-A nrPDB 41 3e-04 4BKK-B nrPDB 30 0.43 5UU1-A nrPDB 29 1.0 3QPR-A nrPDB 29 1.1 6C0B-B nrPDB 29 1.2 5WBS-A nrPDB 29 1.3 5T44-A nrPDB 29 1.4 6O3A-E nrPDB 28 1.5 3IFS-A nrPDB 28 1.9 6AVF-H nrPDB 28 1.9 6D7G-A nrPDB 28 3.1 2F1R-A nrPDB 27 5.6 2A14-A nrPDB 27 5.6 4AKX-B nrPDB 27 6.2 4ZGQ-A nrPDB 27 7.2 5BRA-A nrPDB 26 9.5 >1WLJ-A nrPDB Length = 189 Score = 369 bits (947), Expect = e-103, Method: Compositional matrix adjust. Identities = 181/181 (100%), Positives = 181/181 (100%) Query: 1 MAGSREVVAMDCEMVGLGPHRESGLARCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVT 60 MAGSREVVAMDCEMVGLGPHRESGLARCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVT Sbjct: 1 MAGSREVVAMDCEMVGLGPHRESGLARCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVT 60 Query: 61 PQHMVGATPFAVARLEILQLLKGKLVVGHDLKHDFQALKEDMSGYTIYDTSTDRLLWREA 120 PQHMVGATPFAVARLEILQLLKGKLVVGHDLKHDFQALKEDMSGYTIYDTSTDRLLWREA Sbjct: 61 PQHMVGATPFAVARLEILQLLKGKLVVGHDLKHDFQALKEDMSGYTIYDTSTDRLLWREA 120 Query: 121 KLDHCRRVSLRVLSERLLHKSIQNSLLGHSSVEDARATMELYQISQRIRARRGLPRLAVS 180 KLDHCRRVSLRVLSERLLHKSIQNSLLGHSSVEDARATMELYQISQRIRARRGLPRLAVS Sbjct: 121 KLDHCRRVSLRVLSERLLHKSIQNSLLGHSSVEDARATMELYQISQRIRARRGLPRLAVS 180 Query: 181 D 181 D Sbjct: 181 D 181 >5Z9X-A nrPDB Length = 409 Score = 77.8 bits (190), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 54/160 (33%), Positives = 84/160 (52%), Gaps = 8/160 (5%) Query: 4 SREVVAMDCEMVGLGPHRESGLARCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVTPQH 63 S +VA+DCEMV L GL R +V+ V+ D+F++P + DYRT ++G+T + Sbjct: 137 STNMVAVDCEMV-LCEDGTEGLVRVGVVDRDLKVILDEFVKPNKPVVDYRTDITGITAED 195 Query: 64 MVGATPFAVARLEILQ--LLKGKLVVGHDLKHDFQALKEDMSGYTIYDTSTDRLLWREAK 121 + A+ V E LQ L G ++VGH L D + LK D + DT+ L+++ Sbjct: 196 IENASLSVVDIQETLQPFLSTGTILVGHSLNRDLEVLKIDHPK--VIDTA---LVFKYPN 250 Query: 122 LDHCRRVSLRVLSERLLHKSIQNSLLGHSSVEDARATMEL 161 RR SL L + +L ++ + + H V DA A M+L Sbjct: 251 TRKLRRPSLNNLCKSILGYEVRKTGVPHDCVHDASAAMKL 290 >2P1J-A nrPDB Length = 186 Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 23/100 (23%), Positives = 45/100 (45%), Gaps = 4/100 (4%) Query: 3 GSREVVAMDCEMVGLGPHRESGLARCSLVNVHGAVLYDKF---IRPEGEITDYRTRVSGV 59 G V +D E GL P + + V + G + D++ I+P EI+ + ++G+ Sbjct: 10 GDATFVVLDFETTGLDPQVDE-IIEIGAVKIQGGQIVDEYHTLIKPSREISRKSSEITGI 68 Query: 60 TPQHMVGATPFAVARLEILQLLKGKLVVGHDLKHDFQALK 99 T + + E L L+ ++V H+ D++ L+ Sbjct: 69 TQEMLENKRSIEEVLPEFLGFLEDSIIVAHNANFDYRFLR 108 >4BKK-B nrPDB Length = 391 Score = 30.4 bits (67), Expect = 0.43, Method: Compositional matrix adjust. Identities = 13/39 (33%), Positives = 26/39 (66%), Gaps = 1/39 (2%) Query: 137 LLHKSIQNSLLGHSSVE-DARATMELYQISQRIRARRGL 174 +L KS++N +LGH+SV+ + +E+Y+ +Q++ G Sbjct: 262 VLAKSVKNIMLGHASVQAEMEQVVEVYEYAQKLGGEAGF 300 >5UU1-A nrPDB Length = 324 Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust. Identities = 19/83 (22%), Positives = 40/83 (48%) Query: 25 LARCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVTPQHMVGATPFAVARLEILQLLKGK 84 L C L + G + +++ ++ + +T + PQ ++ P + EI Q L Sbjct: 225 LGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCA 284 Query: 85 LVVGHDLKHDFQALKEDMSGYTI 107 + +D K ++QALK+ ++ + I Sbjct: 285 HSLAYDEKPNYQALKKILNPHGI 307 >3QPR-A nrPDB Length = 385 Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust. Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 10/95 (10%) Query: 27 RCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVTPQHMVGATPFAVARLEILQ-LLKGKL 85 R + + V+ +K ++PE +IT + + T H V A+ + +LQ + +L Sbjct: 152 REEVFTNNADVVAEKALKPESDITFSKQTANVKTIAHWVQASRQVMDDAPMLQSYINNRL 211 Query: 86 VVGHDLKHDFQALKEDMSG---------YTIYDTS 111 + G LK + Q L D +G T YDTS Sbjct: 212 MYGLALKEEGQLLNGDGTGDNLEGLNKVATAYDTS 246 >6C0B-B nrPDB Length = 156 Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust. Identities = 14/55 (25%), Positives = 33/55 (60%), Gaps = 4/55 (7%) Query: 119 EAKLDH--CRRVSLRVLSERLLHKSIQNSLLGHSSVEDARATMELYQISQRIRAR 171 + DH C+ +S+ + ++ +++I +LLGH++ ED A +E++Q ++ + Sbjct: 31 QGPPDHGFCQPISIPLCTDIAYNQTIMPNLLGHTNQED--AGLEVHQFYPLVKVQ 83 >5WBS-A nrPDB Length = 190 Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust. Identities = 14/51 (27%), Positives = 32/51 (62%), Gaps = 4/51 (7%) Query: 123 DH--CRRVSLRVLSERLLHKSIQNSLLGHSSVEDARATMELYQISQRIRAR 171 DH C+ +S+ + ++ +++I +LLGH++ ED A +E++Q ++ + Sbjct: 16 DHGFCQPISIPLCTDIAYNQTILPNLLGHTNQED--AGLEVHQFYPLVKVQ 64 >5T44-A nrPDB Length = 147 Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust. Identities = 14/51 (27%), Positives = 32/51 (62%), Gaps = 4/51 (7%) Query: 123 DH--CRRVSLRVLSERLLHKSIQNSLLGHSSVEDARATMELYQISQRIRAR 171 DH C+ +S+ + ++ +++I +LLGH++ ED A +E++Q ++ + Sbjct: 15 DHGFCQPISIPLCTDIAYNQTILPNLLGHTNQED--AGLEVHQFYPLVKVQ 63 >6O3A-E nrPDB Length = 138 Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust. Identities = 14/51 (27%), Positives = 32/51 (62%), Gaps = 4/51 (7%) Query: 123 DH--CRRVSLRVLSERLLHKSIQNSLLGHSSVEDARATMELYQISQRIRAR 171 DH C+ +S+ + ++ +++I +LLGH++ ED A +E++Q ++ + Sbjct: 4 DHGFCQPISIPLCTDIAYNQTILPNLLGHTNQED--AGLEVHQFYPLVKVQ 52 >3IFS-A nrPDB Length = 453 Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 7/58 (12%) Query: 26 ARCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVTPQHMVGATPFAVARLEILQLLKG 83 AR +L + Y+ F+ P+ D R S +TP VG P AV+ L I +++KG Sbjct: 186 ARGALKTLADNEGYETFVIPD----DVGGRFSVLTP---VGLLPIAVSGLNIEEMMKG 236 >6AVF-H nrPDB Length = 362 Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust. Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 6/68 (8%) Query: 83 GKLVVGHDL----KHDFQALKEDMSGYTIYDTSTD--RLLWREAKLDHCRRVSLRVLSER 136 G+L+ GHD D+ AL ED+ +T DT+ + W A+ RR L Sbjct: 131 GRLLRGHDQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQRRAYLEGECVE 190 Query: 137 LLHKSIQN 144 L + ++N Sbjct: 191 WLRRYLEN 198 >6D7G-A nrPDB Length = 427 Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust. Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 15/102 (14%) Query: 78 LQLLKGKLVVGHDLKHDFQALKEDMSGYTIYDTS--TDRLLWREAKLDHCRRVSLRVLSE 135 + L+G +D K D+ ALKED+ +T D + T + W A + R L Sbjct: 251 WRFLRGYHQYAYDGK-DYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAYLEGTCV 309 Query: 136 RLLHKSIQN------------SLLGHSSVEDARATMELYQIS 165 L + ++N + + H +V D AT+ + +S Sbjct: 310 EWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEATLRCWALS 351 >2F1R-A nrPDB Length = 171 Score = 26.9 bits (58), Expect = 5.6, Method: Compositional matrix adjust. Identities = 13/36 (36%), Positives = 19/36 (52%) Query: 94 DFQALKEDMSGYTIYDTSTDRLLWREAKLDHCRRVS 129 DF+ KE + IY++ D ++ KL RRVS Sbjct: 43 DFEIDKEGKDSWKIYNSGADVVIASPVKLAFIRRVS 78 >2A14-A nrPDB Length = 263 Score = 26.9 bits (58), Expect = 5.6, Method: Compositional matrix adjust. Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 15/87 (17%) Query: 7 VVAMDCEMVGLGPHRESGLARCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVTPQHMVG 66 ++AM+C L +R A C+L ++ ++P G + T V+ P +MVG Sbjct: 163 LLAMECACCSLDAYRA---ALCNLASL---------LKPGGHLV---TTVTLRLPSYMVG 207 Query: 67 ATPFAVARLEILQLLKGKLVVGHDLKH 93 F+ LE ++ + L G D++ Sbjct: 208 KREFSCVALEKGEVEQAVLDAGFDIEQ 234 >4AKX-B nrPDB Length = 660 Score = 26.6 bits (57), Expect = 6.2, Method: Compositional matrix adjust. Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 2/67 (2%) Query: 111 STDRLLWREAKLDHCRRVSLRVLSERLLHKSIQNSLLGHSSVEDARATMELYQISQRIRA 170 + +RL W A+L+H V + L + + +++Q+ +L + E R + + I++ IR Sbjct: 527 TPERLAWLAAELNHADNVDHQQLLDAMRGQTVQSPVLAAALAEAQRRKVAV--IAENIRK 584 Query: 171 RRGLPRL 177 P L Sbjct: 585 EVIFPSL 591 >4ZGQ-A nrPDB Length = 338 Score = 26.6 bits (57), Expect = 7.2, Method: Compositional matrix adjust. Identities = 12/25 (48%), Positives = 14/25 (56%) Query: 76 EILQLLKGKLVVGHDLKHDFQALKE 100 E+L LLK V HDL H F K+ Sbjct: 140 EVLLLLKSSDFVAHDLNHAFDDCKD 164 >5BRA-A nrPDB Length = 350 Score = 26.2 bits (56), Expect = 9.5, Method: Compositional matrix adjust. Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 4/76 (5%) Query: 34 HGAVLYDKFIRPEGEITDYRTRVSGVTPQHMV----GATPFAVARLEILQLLKGKLVVGH 89 +GA L + + G Y T V +T + + GA + A + G+L Sbjct: 152 YGANLMKELGKSMGGKGKYVTTVGSLTSKSQMEWIDGAVEYQKANFPEMSEATGRLETYD 211 Query: 90 DLKHDFQALKEDMSGY 105 D D+ LKE M+ Y Sbjct: 212 DANTDYNKLKEAMTAY 227 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 1WLJ-A nrPDB 273 3e-74 5Z9X-A nrPDB 205 9e-54 2P1J-A nrPDB 129 6e-31 Sequences not found previously or not previously below threshold: 2IDO-A nrPDB 54 6e-08 5FKV-D nrPDB 53 8e-08 6A47-A nrPDB 35 0.017 1Y97-A nrPDB 34 0.041 1ZBU-A nrPDB 31 0.34 2GBZ-A nrPDB 29 1.4 1J9A-A nrPDB 28 1.8 1CI0-A nrPDB 28 2.3 1YTA-A nrPDB 28 2.7 3RRI-A nrPDB 28 3.1 5ZEP-e nrPDB 27 4.3 6A4A-A nrPDB 27 4.4 6DZI-m nrPDB 27 4.6 5V93-e nrPDB 27 4.9 4USJ-C nrPDB 26 9.0 >1WLJ-A nrPDB Length = 189 Score = 273 bits (698), Expect = 3e-74, Method: Composition-based stats. Identities = 181/181 (100%), Positives = 181/181 (100%) Query: 1 MAGSREVVAMDCEMVGLGPHRESGLARCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVT 60 MAGSREVVAMDCEMVGLGPHRESGLARCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVT Sbjct: 1 MAGSREVVAMDCEMVGLGPHRESGLARCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVT 60 Query: 61 PQHMVGATPFAVARLEILQLLKGKLVVGHDLKHDFQALKEDMSGYTIYDTSTDRLLWREA 120 PQHMVGATPFAVARLEILQLLKGKLVVGHDLKHDFQALKEDMSGYTIYDTSTDRLLWREA Sbjct: 61 PQHMVGATPFAVARLEILQLLKGKLVVGHDLKHDFQALKEDMSGYTIYDTSTDRLLWREA 120 Query: 121 KLDHCRRVSLRVLSERLLHKSIQNSLLGHSSVEDARATMELYQISQRIRARRGLPRLAVS 180 KLDHCRRVSLRVLSERLLHKSIQNSLLGHSSVEDARATMELYQISQRIRARRGLPRLAVS Sbjct: 121 KLDHCRRVSLRVLSERLLHKSIQNSLLGHSSVEDARATMELYQISQRIRARRGLPRLAVS 180 Query: 181 D 181 D Sbjct: 181 D 181 >5Z9X-A nrPDB Length = 409 Score = 205 bits (521), Expect = 9e-54, Method: Composition-based stats. Identities = 54/160 (33%), Positives = 84/160 (52%), Gaps = 8/160 (5%) Query: 4 SREVVAMDCEMVGLGPHRESGLARCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVTPQH 63 S +VA+DCEMV L GL R +V+ V+ D+F++P + DYRT ++G+T + Sbjct: 137 STNMVAVDCEMV-LCEDGTEGLVRVGVVDRDLKVILDEFVKPNKPVVDYRTDITGITAED 195 Query: 64 MVGATPFAVARLEILQ--LLKGKLVVGHDLKHDFQALKEDMSGYTIYDTSTDRLLWREAK 121 + A+ V E LQ L G ++VGH L D + LK D + DT+ L+++ Sbjct: 196 IENASLSVVDIQETLQPFLSTGTILVGHSLNRDLEVLKIDHPK--VIDTA---LVFKYPN 250 Query: 122 LDHCRRVSLRVLSERLLHKSIQNSLLGHSSVEDARATMEL 161 RR SL L + +L ++ + + H V DA A M+L Sbjct: 251 TRKLRRPSLNNLCKSILGYEVRKTGVPHDCVHDASAAMKL 290 >2P1J-A nrPDB Length = 186 Score = 129 bits (325), Expect = 6e-31, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 67/168 (39%), Gaps = 16/168 (9%) Query: 3 GSREVVAMDCEMVGLGPHRESGLARCSLVNVHGAVLYDKF---IRPEGEITDYRTRVSGV 59 G V +D E GL P + + V + G + D++ I+P EI+ + ++G+ Sbjct: 10 GDATFVVLDFETTGLDPQVDE-IIEIGAVKIQGGQIVDEYHTLIKPSREISRKSSEITGI 68 Query: 60 TPQHMVGATPFAVARLEILQLLKGKLVVGHDLKHDFQALKEDMSGYTIYDTSTDRLLWRE 119 T + + E L L+ ++V H+ D++ L+ + D W Sbjct: 69 TQEMLENKRSIEEVLPEFLGFLEDSIIVAHNANFDYRFLRLWIKKVMGLD-------WER 121 Query: 120 AKLDHCRRVSLRVLSERL-LHKSIQNSLLG----HSSVEDARATMELY 162 +D + L ++ LG H +++DAR T +++ Sbjct: 122 PYIDTLALAKSLLKLRSYSLDSVVEKLGLGPFRHHRALDDARVTAQVF 169 >2IDO-A nrPDB Length = 186 Score = 53.5 bits (127), Expect = 6e-08, Method: Composition-based stats. Identities = 37/171 (21%), Positives = 64/171 (37%), Gaps = 20/171 (11%) Query: 8 VAMDCEMVGLGPHRES----GLARCSLVNVHGAVL----YDKFIRPEGEITDYRTRVSGV 59 + +D E G+ + V V L + +++P+ + V G+ Sbjct: 9 IVLDTETTGMNQIGAHYEGHKIIEIGAVEVVNRRLTGNNFHVYLKPDRLVDPEAFGVHGI 68 Query: 60 TPQHMVGATPFAVARLEILQLLKGKLVVGHDLKHD-------FQALKEDMSGYTIYDTST 112 + ++ FA E + ++G +V H+ D F LK D+ + T Sbjct: 69 ADEFLLDKPTFAEVADEFMDYIRGAELVIHNAAFDIGFMDYEFSLLKRDIPKTNTFCKVT 128 Query: 113 DRLLWREAKLDHCRRVSLRVLSERLLHKSIQNSLLG-HSSVEDARATMELY 162 D L K+ +R SL L R I NS H ++ DA+ E+Y Sbjct: 129 DSLAVAR-KMFPGKRNSLDALCAR---YEIDNSKRTLHGALLDAQILAEVY 175 >5FKV-D nrPDB Length = 243 Score = 52.7 bits (125), Expect = 8e-08, Method: Composition-based stats. Identities = 37/171 (21%), Positives = 64/171 (37%), Gaps = 20/171 (11%) Query: 8 VAMDCEMVGLGPHRES----GLARCSLVNVHGAVL----YDKFIRPEGEITDYRTRVSGV 59 + +D E G+ + V V L + +++P+ + V G+ Sbjct: 9 IVLDTETTGMNQIGAHYEGHKIIEIGAVEVVNRRLTGNNFHVYLKPDRLVDPEAFGVHGI 68 Query: 60 TPQHMVGATPFAVARLEILQLLKGKLVVGHDLKHD-------FQALKEDMSGYTIYDTST 112 + ++ FA E + ++G +V H+ D F LK D+ + T Sbjct: 69 ADEFLLDKPTFAEVADEFMDYIRGAELVIHNAAFDIGFMDYEFSLLKRDIPKTNTFCKVT 128 Query: 113 DRLLWREAKLDHCRRVSLRVLSERLLHKSIQNSLLG-HSSVEDARATMELY 162 D L K+ +R SL L R I NS H ++ DA+ E+Y Sbjct: 129 DSLAVAR-KMFPGKRNSLDALCAR---YEIDNSKRTLHGALLDAQILAEVY 175 >6A47-A nrPDB Length = 256 Score = 35.0 bits (79), Expect = 0.017, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 41/118 (34%), Gaps = 28/118 (23%) Query: 6 EVVAMDCEMVGLGPHRESGLARCSLVNVH----------------GAVLYDKF---IRPE 46 V +D E GL P+ + +A SL VH + DK + PE Sbjct: 29 TFVFLDLEATGL-PNMDPEIAEISLFAVHRSSLENPERDDSGSLVLPRVLDKLTLCMCPE 87 Query: 47 GEITDYRTRVSGVTPQHMVG------ATPFAVARLEILQLLKGKL-VVGHDLKHDFQA 97 T + ++G++ + ++ L +G + +V H+ D+ Sbjct: 88 RPFTAKASEITGLSSESLMHCGKAGFNGAVVRTLQGFLSRQEGPICLVAHN-GFDYDF 144 >1Y97-A nrPDB Length = 238 Score = 33.9 bits (76), Expect = 0.041, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 38/118 (32%), Gaps = 28/118 (23%) Query: 6 EVVAMDCEMVGLGPHRESGLARCSLVNVH----------------GAVLYDKF---IRPE 46 V +D E GL P E +A SL VH + DK + PE Sbjct: 11 TFVFLDLEATGL-PSVEPEIAELSLFAVHRSSLENPEHDESGALVLPRVLDKLTLCMCPE 69 Query: 47 GEITDYRTRVSGVTPQHMVGAT------PFAVARLEILQLLKGKL-VVGHDLKHDFQA 97 T + ++G++ + + L G + +V H+ D+ Sbjct: 70 RPFTAKASEITGLSSEGLARCRKAGFDGAVVRTLQAFLSRQAGPICLVAHN-GFDYDF 126 >1ZBU-A nrPDB Length = 349 Score = 30.8 bits (68), Expect = 0.34, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 51/127 (40%), Gaps = 18/127 (14%) Query: 7 VVAMDCEMV---GLGPHRESGLARCSLV--NVHGAVLYD---KFIRP--EGEITDYRTRV 56 + +D E G P + +V N H + D +++RP +++D+ + Sbjct: 130 ICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFCISL 189 Query: 57 SGVTPQHMVGATPFAVARLEILQLLKGKLVVGHDLKHDFQALKE---DMSGYTIYDTSTD 113 +G+T + A F +++ L+K K + K+ + L + DMS + Sbjct: 190 TGITQDQVDRADTFPQVLKKVIDLMKLKEL---GTKYKYSLLTDGSWDMSKFLNIQCQLS 246 Query: 114 RLLWREA 120 RL + Sbjct: 247 RL--KYP 251 >2GBZ-A nrPDB Length = 194 Score = 28.9 bits (63), Expect = 1.4, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 48/126 (38%), Gaps = 19/126 (15%) Query: 1 MAGSREVVAMDCEMVGLGPHRESGLARCSLV--NVHGAVLYD----------KFIRPEGE 48 +AG+ ++ +D EM GL R+S + + + + VL + + + E Sbjct: 5 VAGNDRLIWIDLEMTGLDTDRDS-IIEIATIVTDAQLNVLAEGPELAIAHSLETLEAMDE 63 Query: 49 ITDYRTRVSGVTPQHMVGATPFAVARLEILQLLKGKL------VVGHDLKHDFQALKEDM 102 + R SG+ + + A A + + L + + G+ + D + L M Sbjct: 64 WNRNQHRRSGLWQRVLDSQVTHAQAEAQTVAFLGEWIRAGASPMCGNSICQDRRFLHRQM 123 Query: 103 SGYTIY 108 S Y Sbjct: 124 SRLERY 129 >1J9A-A nrPDB Length = 184 Score = 28.5 bits (62), Expect = 1.8, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 59/176 (33%), Gaps = 25/176 (14%) Query: 6 EVVAMDCEMVGLGPHRESGLARCSLVNVH--------GAVLY----DKFIRPEGEITDYR 53 ++ +D EM GL P + + + + G VL D+ + + Sbjct: 9 NLIWIDLEMTGLDPEK-ERIIEIATIVTDKNLNILAEGPVLAVHQSDELLNKMNDWCQKT 67 Query: 54 TRVSGVTPQHMVGATPFAVARLEILQLLK------GKLVVGHDLKHDFQALKEDMSGYTI 107 +G+ + A L+ L LK + G+ + D + L + M Sbjct: 68 HSENGLIERIKASKLTERAAELQTLDFLKKWVPKGASPICGNSIAQDKRFLVKYMPDL-- 125 Query: 108 YDTSTDRLLWREAKLDHCRRVSLRVLSERLLHKSIQNSLLGHSSVEDARATMELYQ 163 D +R + + ++ R E L +N+ L + ++ + Y+ Sbjct: 126 ----ADYFHYRHLDVSTLKELAARWKPEILEGFKKENTHLALDDIRESIKELAYYR 177 >1CI0-A nrPDB Length = 228 Score = 28.1 bits (61), Expect = 2.3, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 23/70 (32%), Gaps = 2/70 (2%) Query: 39 YDKFIRPEGEITDYRTRVSGVTPQHMVGATPFAVARLEILQLLKGKLVVGHDLKHDFQAL 98 YDKF E ++TD + T E + +L G Sbjct: 21 YDKFTLNEKQLTDDPIDL--FTKWFNEAKEDPRETLPEAITFSSAELPSGRVSSRILLFK 78 Query: 99 KEDMSGYTIY 108 + D G+TIY Sbjct: 79 ELDHRGFTIY 88 >1YTA-A nrPDB Length = 180 Score = 27.7 bits (60), Expect = 2.7, Method: Composition-based stats. Identities = 29/180 (16%), Positives = 62/180 (34%), Gaps = 25/180 (13%) Query: 2 AGSREVVAMDCEMVGLGPHRESGLARCS--LVNVHGAVLY----------DKFIRPEGEI 49 A ++ +D EM GL P R+ + + + + + +L D+ + + Sbjct: 2 ANENNLIWIDLEMTGLDPERDR-IIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDW 60 Query: 50 TDYRTRVSGVTPQHMVGATPFAVARLEILQLLKG------KLVVGHDLKHDFQALKEDMS 103 SG+ + A L L+ LK + G+ + D + L + M Sbjct: 61 NVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMP 120 Query: 104 GYTIYDTSTDRLLWREAKLDHCRRVSLRVLSERLLHKSIQNSLLGHSSVEDARATMELYQ 163 Y +R + + ++ R E L + Q + + ++ A + Y+ Sbjct: 121 ELEAY------FHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYR 174 >3RRI-A nrPDB Length = 135 Score = 27.7 bits (60), Expect = 3.1, Method: Composition-based stats. Identities = 9/31 (29%), Positives = 16/31 (51%) Query: 89 HDLKHDFQALKEDMSGYTIYDTSTDRLLWRE 119 HDL F+ L E+ + + D S + L ++ Sbjct: 97 HDLSRRFEGLIEEHETFFLIDPSNNLLEFKY 127 >5ZEP-e nrPDB Length = 214 Score = 27.3 bits (59), Expect = 4.3, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 14/24 (58%) Query: 152 VEDARATMELYQISQRIRARRGLP 175 V A ++L Q + + ARRGLP Sbjct: 162 VHATVAALKLLQRPEEVAARRGLP 185 >6A4A-A nrPDB Length = 181 Score = 26.9 bits (58), Expect = 4.4, Method: Composition-based stats. Identities = 27/143 (18%), Positives = 47/143 (32%), Gaps = 26/143 (18%) Query: 1 MAG-SREVVAMDCEMVGLGPHRESGLARCSLVNVHGAVLY------------DKFIRPEG 47 MAG ++ +D EM GL P E + +++ + D + Sbjct: 1 MAGNDSNLIWLDLEMTGLEP-VEDVILEIAIIITDSELNILAQGPIFAISQTDDVLDNMN 59 Query: 48 EITDYRTRVSGVTPQHMVGATPFAVARLEILQLLKG------KLVVGHDLKHDFQALK-- 99 SG+T + A A E L ++ + G+ + D + + Sbjct: 60 PWCIEHHGKSGLTQRCRDSEVSLAHATKESLAFVQEWVPQGKSPMCGNSIGQDRRFINKY 119 Query: 100 ----EDMSGYTIYDTSTDRLLWR 118 ED Y D ST + L + Sbjct: 120 MPDFEDHFHYRNLDVSTIKELAK 142 >6DZI-m nrPDB Length = 180 Score = 26.9 bits (58), Expect = 4.6, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 14/24 (58%) Query: 152 VEDARATMELYQISQRIRARRGLP 175 V A ++L Q + + ARRGLP Sbjct: 128 VHATVAALKLLQRPEEVAARRGLP 151 >5V93-e nrPDB Length = 220 Score = 26.9 bits (58), Expect = 4.9, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 14/24 (58%) Query: 152 VEDARATMELYQISQRIRARRGLP 175 V A ++L Q + + ARRGLP Sbjct: 168 VHATVAALKLLQRPEEVAARRGLP 191 >4USJ-C nrPDB Length = 154 Score = 26.2 bits (56), Expect = 9.0, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 19/46 (41%), Gaps = 2/46 (4%) Query: 23 SGLARCSLVNVHGAVLYDK--FIRPEGEITDYRTRVSGVTPQHMVG 66 + R + + + D F+ P E+ RT +G+ + M G Sbjct: 89 DAVVRLVAASAYTGEIGDGKIFVHPVAEVVRIRTAETGLEAEKMEG 134 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.321 0.136 0.342 Lambda K H 0.267 0.0412 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 6,301,152 Number of Sequences: 36641 Number of extensions: 219572 Number of successful extensions: 648 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 23 Number of HSP's successfully gapped in prelim test: 25 Number of HSP's that attempted gapping in prelim test: 618 Number of HSP's gapped (non-prelim): 48 length of query: 181 length of database: 10,336,785 effective HSP length: 91 effective length of query: 90 effective length of database: 7,002,454 effective search space: 630220860 effective search space used: 630220860 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 56 (26.2 bits)