BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= Q96AT9
(228 letters)
Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
36,641 sequences; 10,336,785 total letters
Searching..................................................done
Results from round 1
Score E
Sequences producing significant alignments: (bits) Value
3OVQ-A nrPDB 475 e-135
1H1Z-A nrPDB 232 8e-62
4NU7-A nrPDB 226 6e-60
1TQX-A nrPDB 201 2e-52
2FLI-A nrPDB 187 2e-48
3INP-A nrPDB 158 1e-39
5UMF-A nrPDB 156 7e-39
1TQJ-A nrPDB 155 2e-38
1RPX-A nrPDB 145 1e-35
3CT7-A nrPDB 138 2e-33
3CU2-A nrPDB 60 6e-10
3ZV0-A nrPDB 33 0.076
6NKE-A nrPDB 33 0.10
2DH2-A nrPDB 31 0.44
6IRT-A nrPDB 31 0.51
4I0W-B nrPDB 30 0.89
3F4W-A nrPDB 30 1.0
1XI3-A nrPDB 30 1.1
2E11-A nrPDB 29 1.5
2LY7-A nrPDB 29 1.6
5AYY-A nrPDB 29 1.7
1QT1-A nrPDB 29 2.0
4I9A-A nrPDB 29 2.0
3O15-A nrPDB 29 2.1
3O63-A nrPDB 29 2.1
3FZV-A nrPDB 28 2.9
4X4W-A nrPDB 28 3.1
5ZHX-A nrPDB 28 3.5
6A8M-A nrPDB 28 3.9
2OC2-A nrPDB 28 4.8
2AEG-A nrPDB 27 5.7
3GNN-A nrPDB 27 6.1
3TBI-B nrPDB 27 6.2
3KBJ-A nrPDB 27 6.3
5ELW-A nrPDB 27 8.3
4JF0-A nrPDB 27 9.5
>3OVQ-A nrPDB
Length = 228
Score = 475 bits (1223), Expect = e-135, Method: Compositional matrix adjust.
Identities = 228/228 (100%), Positives = 228/228 (100%)
Query: 1 MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ
Sbjct: 1 MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 LGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIK 120
LGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIK
Sbjct: 61 LGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIK 120
Query: 121 PGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVGP 180
PGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVGP
Sbjct: 121 PGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVGP 180
Query: 181 DTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSEAAQKRSLDR 228
DTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSEAAQKRSLDR
Sbjct: 181 DTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSEAAQKRSLDR 228
>1H1Z-A nrPDB
Length = 228
Score = 232 bits (592), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 117/224 (52%), Positives = 160/224 (71%), Gaps = 7/224 (3%)
Query: 6 KIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDP 65
KI PS+L+SD ANL AE RM+ GAD+LH+D+MDGHFVPN+T G PV++SLRK
Sbjct: 8 KIAPSMLSSDFANLAAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKH--TKA 65
Query: 66 FFDMHMMVSKPEQWVKPMAVAGANQYTFHLEAT-ENPGALIKDIRENGMKVGLAIKPGTS 124
+ D H+MV+ P +V+P+A AGA+ +TFH+E + +N LI+ I+ GM+ G++++PGT
Sbjct: 66 YLDCHLMVTNPSDYVEPLAKAGASGFTFHIEVSRDNWQELIQSIKAKGMRPGVSLRPGTP 125
Query: 125 VEYLAPWA---NQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVGPD 181
VE + P N +++ LVMTVEPGFGGQKFM +MM KV LR ++PSLDIEVDGG+GP
Sbjct: 126 VEEVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMEKVRALRKKYPSLDIEVDGGLGPS 185
Query: 182 TVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSEAAQKRS 225
T+ A AGAN IV+GS+I + +P VI+ LR E +Q +S
Sbjct: 186 TIDVAASAGANCIVAGSSIFGAAEPGEVISALRKSV-EGSQNKS 228
>4NU7-A nrPDB
Length = 246
Score = 226 bits (576), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 112/218 (51%), Positives = 156/218 (71%), Gaps = 7/218 (3%)
Query: 7 IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPF 66
I PS+L SDL++L ++ RM+D+G D+LHLD+MDGHFVPNI+FG VV++LR L + F
Sbjct: 9 ICPSVLASDLSSLASDAKRMVDAGCDWLHLDIMDGHFVPNISFGPGVVKALRGHL-KSAF 67
Query: 67 FDMHMMVSKPEQWVKPMAVAGANQYTFHLEAT----ENPGALIKDIRENGMKVGLAIKPG 122
FD+H+MVS+PE+W++P A AGAN TFH E+ + L K I+ G+K GLAIKP
Sbjct: 68 FDVHLMVSEPEKWIQPFADAGANSITFHWESVGGDLQRAAELAKRIQARGIKAGLAIKPA 127
Query: 123 TSVEYL--APWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVGP 180
T E L A + DM LVMTVEPGFGGQKFM DM+ KV R+ FP L+I+VDGG+
Sbjct: 128 TKFEDLGEALAGDNFDMLLVMTVEPGFGGQKFMADMLQKVRTARSLFPKLNIQVDGGLDG 187
Query: 181 DTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCS 218
+TV A AGAN+IV+G+++ ++E+P +++ +R+V +
Sbjct: 188 ETVKPAASAGANVIVAGTSMFKAENPAALMTFMRDVIA 225
>1TQX-A nrPDB
Length = 227
Score = 201 bits (512), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 104/214 (48%), Positives = 147/214 (68%), Gaps = 9/214 (4%)
Query: 7 IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPF 66
I PS+L S+++ L E RM GA+++HLDVMD HFVPN++FG PV+ +L+K + F
Sbjct: 8 IAPSVLASNISKLAEETQRMESLGAEWIHLDVMDMHFVPNLSFGPPVINNLKK-YTKSIF 66
Query: 67 FDMHMMVSKPEQWVKPMAVAGANQYTFHLEA----TENPGALIKDIRENGMKVGLAIKPG 122
FD+H+MV PE++V P+ + +NQ TFH EA TE L K+IR+N + G++IKP
Sbjct: 67 FDVHLMVEYPEKYV-PL-LKTSNQLTFHFEALNEDTERCIQLAKEIRDNNLWCGISIKPK 124
Query: 123 TSVEYLAPW--ANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVGP 180
T V+ L P N I+ LVMTVEPGFGGQ FM DMM KV +LR ++ +L+I+VDGG+
Sbjct: 125 TDVQKLVPILDTNLINTVLVMTVEPGFGGQSFMHDMMGKVSFLRKKYKNLNIQVDGGLNI 184
Query: 181 DTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLR 214
+T A GAN+IV+G++I +EDP+ VI+ +R
Sbjct: 185 ETTEISASHGANIIVAGTSIFNAEDPKYVIDTMR 218
>2FLI-A nrPDB
Length = 220
Score = 187 bits (476), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/217 (44%), Positives = 132/217 (60%), Gaps = 6/217 (2%)
Query: 3 SGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLG 62
S KI PSIL +D AN +E R+ ++ A+Y+H+D+MDG FVPNI+FG VV S+RK
Sbjct: 2 STLKIAPSILAADYANFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKH-- 59
Query: 63 QDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPG 122
FD H+MV PE++V+ A AGA+ T H E+T + ++ I+ GMK G+ I PG
Sbjct: 60 SKLVFDCHLMVVDPERYVEAFAQAGADIMTIHTESTRHIHGALQKIKAAGMKAGVVINPG 119
Query: 123 TSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKV----HWLRTQFPSLDIEVDGGV 178
T L P + +D L+MTV PGFGGQ F+ + + KV W + S DIEVDGGV
Sbjct: 120 TPATALEPLLDLVDQVLIMTVNPGFGGQAFIPECLEKVATVAKWRDEKGLSFDIEVDGGV 179
Query: 179 GPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRN 215
T+ C EAGAN+ V+GS + ++ D S + LR
Sbjct: 180 DNKTIRACYEAGANVFVAGSYLFKASDLVSQVQTLRT 216
>3INP-A nrPDB
Length = 246
Score = 158 bits (400), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 129/214 (60%), Gaps = 5/214 (2%)
Query: 6 KIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDP 65
+I PSIL++DLA LG + +L +GAD +H DVMD H+VPN+TFG V+++LR G
Sbjct: 29 QINPSILSADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALR-DYGITA 87
Query: 66 FFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPGTSV 125
D+H+MV + ++ A AGA FH EA+E+ ++ I+ G++ GLA+ P T +
Sbjct: 88 GMDVHLMVKPVDALIESFAKAGATSIVFHPEASEHIDRSLQLIKSFGIQAGLALNPATGI 147
Query: 126 EYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKV----HWLRTQFPSLDIEVDGGVGPD 181
+ L + ID L+M+V PGFGGQKF+ M+ K W+ + + +E+DGGV P
Sbjct: 148 DCLKYVESNIDRVLIMSVNPGFGGQKFIPAMLDKAKEISKWISSTDRDILLEIDGGVNPY 207
Query: 182 TVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRN 215
+ + A G N V+GSAI S+ + I+ +R+
Sbjct: 208 NIAEIAVCGVNAFVAGSAIFNSDSYKQTIDKMRD 241
>5UMF-A nrPDB
Length = 235
Score = 156 bits (394), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 87/227 (38%), Positives = 129/227 (56%), Gaps = 10/227 (4%)
Query: 3 SGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLG 62
+ +I PSIL++D A LG E ++ +GAD +H DVMD H+VPN+TFG P+V + K
Sbjct: 10 TAYRIAPSILSADFARLGEEVANVIAAGADLIHFDVMDNHYVPNLTFG-PMVCAALKPYA 68
Query: 63 QDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPG 122
P D+H+MV + ++ A AGA+ TFH EA+ + + IR+ G + GL + P
Sbjct: 69 SVPI-DVHLMVEPVDDLIQSFAKAGASIITFHPEASRHIDRSLSLIRDMGCQAGLVLNPA 127
Query: 123 TSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLD--------IEV 174
T V L +++DM L+M+V PGFGGQ F+ + K+ +R + IEV
Sbjct: 128 TPVYVLENVLDRLDMVLLMSVNPGFGGQSFIPHTLEKIRQVRAMLDRYEGKSGRRIAIEV 187
Query: 175 DGGVGPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSEAA 221
DGG+ D + A AGA+ V+GSAI D ++VI +R +AA
Sbjct: 188 DGGIKTDNIAAVARAGADTFVAGSAIFGKPDYKAVIAAMRAELEKAA 234
>1TQJ-A nrPDB
Length = 230
Score = 155 bits (391), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/221 (38%), Positives = 134/221 (60%), Gaps = 8/221 (3%)
Query: 1 MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
M+ + PSIL++D + LG E + ++GAD++H+DVMDG FVPNIT G +V+++R
Sbjct: 1 MSKNIVVAPSILSADFSRLGEEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPL 60
Query: 61 LGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENP--GALIKDIRENGMKVGLA 118
+ D+H+M+ +PE++V+ A AGA+ + H+E +P + IRE G K G
Sbjct: 61 TKKT--LDVHLMIVEPEKYVEDFAKAGADIISVHVEHNASPHLHRTLCQIRELGKKAGAV 118
Query: 119 IKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPS--LD--IEV 174
+ P T +++L D+ L+M+V PGFGGQ F+ +++PK+ LR LD IEV
Sbjct: 119 LNPSTPLDFLEYVLPVCDLILIMSVNPGFGGQSFIPEVLPKIRALRQMCDERGLDPWIEV 178
Query: 175 DGGVGPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRN 215
DGG+ P+ + EAGAN IV+GSA+ + + I +RN
Sbjct: 179 DGGLKPNNTWQVLEAGANAIVAGSAVFNAPNYAEAIAGVRN 219
>1RPX-A nrPDB
Length = 230
Score = 145 bits (367), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 121/205 (59%), Gaps = 8/205 (3%)
Query: 7 IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPF 66
+ PSIL+++ + LG + + +G D++H+DVMDG FVPNIT G VV+SLR D
Sbjct: 13 VSPSILSANFSKLGEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPI--TDLP 70
Query: 67 FDMHMMVSKPEQWVKPMAVAGANQYTFHLE--ATENPGALIKDIRENGMKVGLAIKPGTS 124
D+H+M+ +P+Q V AGA+ + H E +T + I I+ G K G+ + PGT
Sbjct: 71 LDVHLMIVEPDQRVPDFIKAGADIVSVHCEQSSTIHLHRTINQIKSLGAKAGVVLNPGTP 130
Query: 125 VEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLD----IEVDGGVGP 180
+ + + +D+ L+M+V PGFGGQ F+E + K+ LR IEVDGGVGP
Sbjct: 131 LTAIEYVLDAVDLVLIMSVNPGFGGQSFIESQVKKISDLRKICAERGLNPWIEVDGGVGP 190
Query: 181 DTVHKCAEAGANMIVSGSAIMRSED 205
+K EAGAN +V+GSA+ + D
Sbjct: 191 KNAYKVIEAGANALVAGSAVFGAPD 215
>3CT7-A nrPDB
Length = 231
Score = 138 bits (348), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 113/199 (56%), Gaps = 8/199 (4%)
Query: 6 KIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDP 65
KI PS++ DL E + +DS ADY H+D+MDGHFVPN+T P S K+L P
Sbjct: 2 KISPSLMCMDLLKFK-EQIEFIDSHADYFHIDIMDGHFVPNLTLS-PFFVSQVKKLATKP 59
Query: 66 FFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPG-ALIKDIRENGMKVGLAIKPGTS 124
D H+MV++P+ ++ +A AGA+ T H E LI +IR + MKVGL + P T
Sbjct: 60 L-DCHLMVTRPQDYIAQLARAGADFITLHPETINGQAFRLIDEIRRHDMKVGLILNPETP 118
Query: 125 VEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKV----HWLRTQFPSLDIEVDGGVGP 180
VE + + ++ D VMTV+PGF GQ F+ +M+ K+ W + +IEVDG
Sbjct: 119 VEAMKYYIHKADKITVMTVDPGFAGQPFIPEMLDKLAELKAWREREGLEYEIEVDGSCNQ 178
Query: 181 DTVHKCAEAGANMIVSGSA 199
T K AGA++ + G++
Sbjct: 179 ATYEKLMAAGADVFIVGTS 197
>3CU2-A nrPDB
Length = 237
Score = 60.5 bits (145), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 96/215 (44%), Gaps = 21/215 (9%)
Query: 6 KIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDP 65
K+ IL+++ L E +L++ + LH D+ DG F T G + K
Sbjct: 15 KLSVGILSANWLQLNEEVTTLLENQINVLHFDIADGQFSSLFTVGAIGI----KYFPTHC 70
Query: 66 FFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMK---------VG 116
F D+H+MV + K + GAN T LE + I+ + + +G
Sbjct: 71 FKDVHLMVRNQLEVAKAVVANGANLVTLQLEQYHDFALTIEWLAKQKTTYANQVYPVLIG 130
Query: 117 LAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIE--- 173
+ P T + L P+ +QID+ ++T++P G + E ++ +V + + + +E
Sbjct: 131 ACLCPETPISELEPYLDQIDVIQLLTLDPRNGTKYPSELILDRVIQVEKRLGNRRVEKLI 190
Query: 174 -VDGGVGPDTVHKCAEAGANMI---VSGSAIMRSE 204
+DG + + + K + G + I VSGSA+ E
Sbjct: 191 NIDGSMTLE-LAKYFKQGTHQIDWLVSGSALFSGE 224
>3ZV0-A nrPDB
Length = 369
Score = 33.5 bits (75), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 106 KDIRENGMKVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWL 163
+D+ NG+K L P +YL + + + LVM +E QK M+D +PK +L
Sbjct: 90 EDLEINGIKELLKFTPSIVKQYLQWYKDSTNPNLVMPIEFTDEEQKQMQDNLPKKSYL 147
>6NKE-A nrPDB
Length = 252
Score = 33.1 bits (74), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 4/45 (8%)
Query: 174 VDGGV-GPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVC 217
V GG+ P+T + A AGA+MIV+GS +E +V ++LRN+
Sbjct: 199 VGGGIRDPETAMRIALAGADMIVTGSI---AEKSNNVYSVLRNII 240
>2DH2-A nrPDB
Length = 424
Score = 30.8 bits (68), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 4/36 (11%)
Query: 191 ANMIVSGSAIMRSEDPRSVINLLRNVCSEAAQKRSL 226
ANM V G +SEDP S+++L R + + +++RSL
Sbjct: 299 ANMTVKG----QSEDPGSLLSLFRRLSDQRSKERSL 330
>6IRT-A nrPDB
Length = 647
Score = 30.8 bits (68), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 4/36 (11%)
Query: 191 ANMIVSGSAIMRSEDPRSVINLLRNVCSEAAQKRSL 226
ANM V G +SEDP S+++L R + + +++RSL
Sbjct: 520 ANMTVKG----QSEDPGSLLSLFRRLSDQRSKERSL 551
>4I0W-B nrPDB
Length = 477
Score = 30.0 bits (66), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 69/150 (46%), Gaps = 20/150 (13%)
Query: 9 PSILNSDLANLGAECLRM--LDSGADYLHLDVMDGHFVPNITF-----------GHPVVE 55
PS+ N+ NL E + + LD+G DY H D I + + + E
Sbjct: 11 PSVWNN--YNLTGEGILVGFLDTGIDYTHNAFKDAEGNTRIEYIYDLENGVVYDKNKINE 68
Query: 56 SLRKQLGQDPFFDM-HMMVSKPEQWVKPMAVAGAN-QYTFHLEATENPGALIKDIRENGM 113
+L+ + DPF + + +S V +A AG N + + A ++ A++K EN +
Sbjct: 69 ALKSE---DPFSIVPEIDLSGHGTHVAGIACAGGNINFDNYGVAYKSSIAMVKITGENSL 125
Query: 114 KVGLAIKPGTSVEYLAPWANQIDMALVMTV 143
+ L+ + +++L +N+I+ LV+ +
Sbjct: 126 RAALSTQLMRGLKFLMDKSNEINKPLVVNI 155
>3F4W-A nrPDB
Length = 211
Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 148 GGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVGPDTVHKCAEAGANMIVSGSAIMRSEDP 206
G+K ++D++ + R I V GG+ TV A G ++++ GSAI + DP
Sbjct: 142 AGRKPIDDLITMLKVRRKAR----IAVAGGISSQTVKDYALLGPDVVIVGSAITHAADP 196
>1XI3-A nrPDB
Length = 215
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Query: 160 VHWLRTQFPSLDIEV--DGGVGPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVC 217
+ LR S+ I V GG+ D + + G + I SA+M +ED R LR +
Sbjct: 151 LEGLRKIVESVKIPVVAIGGINKDNAREVLKTGVDGIAVISAVMGAEDVRKATEELRKIV 210
Query: 218 SE 219
E
Sbjct: 211 EE 212
>2E11-A nrPDB
Length = 266
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Query: 128 LAPWANQIDMALV-MTVEPGFGGQKF--MEDM-MPKVHWLRTQFPSLDIEVDGGVGPDTV 183
L P A Q D+ ++ T GF + EDM P V W+RTQ L + G V T
Sbjct: 29 LEPLAGQSDLVILPETFTSGFSNEAIDKAEDMDGPTVAWIRTQAARLGAAITGSVQLRTE 88
Query: 184 H 184
H
Sbjct: 89 H 89
>2LY7-A nrPDB
Length = 149
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 6/51 (11%)
Query: 2 ASGCKIGPSILNSDLANLGAECLRMLDS------GADYLHLDVMDGHFVPN 46
A K+GP + D+ N+G + LR LD GA+ D++ G P
Sbjct: 17 ARDTKLGPEEITRDIPNVGEDALRNLDDRGVIRIGAEVKDGDLLVGKVTPK 67
>5AYY-A nrPDB
Length = 305
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 154 EDMMPKVHWLRTQFPSLDIEVDGGVGPDTV 183
E++ P L+ QFPS+ +E GG+ D +
Sbjct: 227 EELHPTATVLKAQFPSVAVEASGGITLDNL 256
>1QT1-A nrPDB
Length = 387
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 33/69 (47%), Gaps = 11/69 (15%)
Query: 62 GQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFH------LEATENPGAL-IKDIR----E 110
G+DPF D P + V+ +A GA+ TFH AT++ A IK R E
Sbjct: 21 GRDPFGDATRGALDPAESVRRLAELGAHGVTFHDDDLIPFGATDSERAEHIKRFRQGLDE 80
Query: 111 NGMKVGLAI 119
GMKV +A
Sbjct: 81 TGMKVPMAT 89
>4I9A-A nrPDB
Length = 288
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 154 EDMMPKVHWLRTQFPSLDIEVDGGVGPDTV 183
E++ P L+ QFP++ +E GGV D +
Sbjct: 227 EELHPTAAALKAQFPTVGVEASGGVTLDNL 256
>3O15-A nrPDB
Length = 235
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%)
Query: 160 VHWLRTQFPSLDIEVDGGVGPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLR 214
+ +R Q S+ I GG+ D +AGA+ + SAI ++EDP S R
Sbjct: 171 IEAVRRQGISIPIVGIGGITIDNAAPVIQAGADGVSMISAISQAEDPESAARKFR 225
>3O63-A nrPDB
Length = 243
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 176 GGVGPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSEA 220
GG+ + +AGA IV AI ++DPR+ LR+ + A
Sbjct: 198 GGINAQRLPAVLDAGARRIVVVRAITSADDPRAAAEQLRSALTAA 242
>3FZV-A nrPDB
Length = 306
Score = 28.1 bits (61), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 43 FVPNITFGHPVVESLRKQLGQDPFFDMHMMVSKP 76
PNI F P +E +R +GQ F ++V++P
Sbjct: 217 LTPNIAFSSPSIEMVRGMVGQG--FGFSLLVTRP 248
>4X4W-A nrPDB
Length = 416
Score = 28.1 bits (61), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 70 HMMVSKPEQW-VKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPGTSVEYL 128
H ++ + +QW + P V+G + + + + GAL++ +RE K G ++ + Y+
Sbjct: 346 HCLLKEMQQWSIPPFPVSGHDIRKVGISSGKEIGALLQQLREQWKKSGYQMEKDELLSYI 405
>5ZHX-A nrPDB
Length = 487
Score = 28.1 bits (61), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 14 SDLANLGAECLRMLDSGADYLHLDVMDGHFVP-NITFGHPVVESLR 58
++ A A C+ M+D+G +D++D H N+T H + +LR
Sbjct: 221 ANFARNDANCIHMVDNGIVEKLMDLLDRHVEDGNVTVQHAALSALR 266
>6A8M-A nrPDB
Length = 461
Score = 27.7 bits (60), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 8/71 (11%)
Query: 77 EQWVKPMAVAGANQYTFHL-EATENPG-------ALIKDIRENGMKVGLAIKPGTSVEYL 128
E+ V M N + L ++++ PG L++ +RE G VGLA K +++
Sbjct: 86 EEGVAQMNKKLENTFKIELWQSSKEPGHNLKLFEDLVERVREAGSAVGLATKDSYQGKFI 145
Query: 129 APWANQIDMAL 139
W D A+
Sbjct: 146 TEWKGVWDTAV 156
>2OC2-A nrPDB
Length = 591
Score = 27.7 bits (60), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 14/84 (16%)
Query: 90 QYTFH---LEATENPGALIK-DI---RENGMKVGLAIKPGTSVEYLAPWANQIDMALVMT 142
Q+ FH +A + G L K DI +E G ++ A+K G S PW + + +T
Sbjct: 494 QFQFHEALCQAAGHTGPLHKCDIYQSKEAGQRLATAMKLGFS----RPWPEAMQL---IT 546
Query: 143 VEPGFGGQKFMEDMMPKVHWLRTQ 166
+P + P + WLRT+
Sbjct: 547 GQPNMSASAMLSYFKPLLDWLRTE 570
>2AEG-A nrPDB
Length = 268
Score = 27.3 bits (59), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 98 TENPGALIKDIRENGMKVGLAIKPGTSVEYLAPW 131
T +P L+K I E M V L + T + APW
Sbjct: 183 TTDPNDLVKPIHEKAMPVLLLTREETEIWMRAPW 216
>3GNN-A nrPDB
Length = 298
Score = 27.3 bits (59), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 152 FMEDMMPKVHWLRTQFPSLDIEVDGGVGPDTVHKCAEAGANMIVSGS 198
F DMM +R +EV GGV DTV AE G + I G+
Sbjct: 238 FTLDMMRDA--VRVTEGRAVLEVSGGVNFDTVRAIAETGVDRISIGA 282
>3TBI-B nrPDB
Length = 228
Score = 27.3 bits (59), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 1 MASGCKIGPSILNSDLANLGAECLRMLD-SGADYLHLDVMDGHFV 44
++ K+GP + +D+ N+G L LD SG Y+ +V G +
Sbjct: 10 VSRDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVTGGDIL 54
>3KBJ-A nrPDB
Length = 388
Score = 26.9 bits (58), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 11/69 (15%)
Query: 62 GQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFH-----------LEATENPGALIKDIRE 110
G+DPF D P + V+ +A GA+ TFH E E+ + + +
Sbjct: 22 GRDPFGDATRRALDPVESVRRLAELGAHGVTFHDDDLIPFGSSDSEREEHVKRFRQALDD 81
Query: 111 NGMKVGLAI 119
GMKV +A
Sbjct: 82 TGMKVPMAT 90
>5ELW-A nrPDB
Length = 205
Score = 26.6 bits (57), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 39 MDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVS 74
+DGH V + + G P ++ + QL FD+H+ +
Sbjct: 28 LDGHGVSDSSTGIPFLDHMLDQLASHGLFDVHVRAT 63
>4JF0-A nrPDB
Length = 422
Score = 26.6 bits (57), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 89 NQYTFHLEATENPGALIKDIRENGMKVGLAIKP 121
Q+ HL+A + + DIR G+ +G +KP
Sbjct: 331 QQFVQHLQAIDEQFDIFSDIRGMGLLIGAELKP 363
Searching..................................................done
Results from round 2
Score E
Sequences producing significant alignments: (bits) Value
Sequences used in model and found again:
3OVQ-A nrPDB 352 1e-97
1H1Z-A nrPDB 305 1e-83
1TQJ-A nrPDB 298 2e-81
2FLI-A nrPDB 294 2e-80
5UMF-A nrPDB 293 6e-80
4NU7-A nrPDB 288 1e-78
3INP-A nrPDB 285 1e-77
1TQX-A nrPDB 283 6e-77
1RPX-A nrPDB 282 1e-76
3CT7-A nrPDB 251 2e-67
3CU2-A nrPDB 224 3e-59
Sequences not found previously or not previously below threshold:
2CZE-A nrPDB 42 2e-04
3EXT-A nrPDB 39 0.002
1YTE-A nrPDB 38 0.003
3F4W-A nrPDB 38 0.004
1XI3-A nrPDB 37 0.005
3O15-A nrPDB 37 0.006
2DZS-A nrPDB 35 0.029
3O63-A nrPDB 34 0.049
2ISS-A nrPDB 33 0.085
3QH2-A nrPDB 33 0.10
3TSB-A nrPDB 33 0.11
4MM1-A nrPDB 33 0.12
4MJM-A nrPDB 33 0.13
6NKE-A nrPDB 32 0.18
3IEB-A nrPDB 32 0.18
5ELW-A nrPDB 32 0.21
4JEJ-A nrPDB 32 0.22
4L22-A nrPDB 32 0.26
1TJR-A nrPDB 32 0.29
2NV2-A nrPDB 32 0.31
3QOK-A nrPDB 31 0.39
4WY0-A nrPDB 31 0.39
3GNN-A nrPDB 31 0.48
2HTM-A nrPDB 31 0.57
3FY4-A nrPDB 30 0.59
1TYG-A nrPDB 30 0.61
4X2R-A nrPDB 30 0.66
6GB2-BE nrPDB 30 0.78
4CE4-E nrPDB 30 0.78
3W7D-A nrPDB 30 1.1
4ADT-A nrPDB 30 1.2
3AJX-A nrPDB 30 1.3
5DLC-A nrPDB 29 1.5
5XFW-A nrPDB 29 1.6
3ZID-A nrPDB 29 1.6
5H05-A nrPDB 29 1.6
6F8N-A nrPDB 29 2.0
5O0B-A nrPDB 29 2.0
4FIQ-A nrPDB 29 2.0
1DBT-A nrPDB 28 2.5
4ML9-A nrPDB 28 2.6
5G1T-A nrPDB 28 3.1
1QT1-A nrPDB 28 3.2
5D0U-A nrPDB 28 3.4
3KBJ-A nrPDB 28 3.6
1T0O-A nrPDB 28 3.6
1J5T-A nrPDB 28 3.8
1SO4-A nrPDB 28 3.9
4WZH-A nrPDB 28 4.1
4MUZ-A nrPDB 28 4.1
3GZ3-A nrPDB 28 4.1
1UJP-A nrPDB 28 4.4
1Q0M-A nrPDB 28 4.4
6G7T-A nrPDB 28 4.6
3NBK-A nrPDB 28 4.9
6NUW-E nrPDB 27 5.9
1O4U-A nrPDB 27 6.2
2YZR-A nrPDB 27 6.3
6IG5-A nrPDB 27 7.0
1R30-A nrPDB 27 7.2
3R67-A nrPDB 27 7.7
>3OVQ-A nrPDB
Length = 228
Score = 352 bits (902), Expect = 1e-97, Method: Composition-based stats.
Identities = 228/228 (100%), Positives = 228/228 (100%)
Query: 1 MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ
Sbjct: 1 MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 LGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIK 120
LGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIK
Sbjct: 61 LGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIK 120
Query: 121 PGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVGP 180
PGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVGP
Sbjct: 121 PGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVGP 180
Query: 181 DTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSEAAQKRSLDR 228
DTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSEAAQKRSLDR
Sbjct: 181 DTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSEAAQKRSLDR 228
>1H1Z-A nrPDB
Length = 228
Score = 305 bits (780), Expect = 1e-83, Method: Composition-based stats.
Identities = 117/224 (52%), Positives = 159/224 (70%), Gaps = 7/224 (3%)
Query: 6 KIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDP 65
KI PS+L+SD ANL AE RM+ GAD+LH+D+MDGHFVPN+T G PV++SLRK
Sbjct: 8 KIAPSMLSSDFANLAAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKH--TKA 65
Query: 66 FFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATE-NPGALIKDIRENGMKVGLAIKPGTS 124
+ D H+MV+ P +V+P+A AGA+ +TFH+E + N LI+ I+ GM+ G++++PGT
Sbjct: 66 YLDCHLMVTNPSDYVEPLAKAGASGFTFHIEVSRDNWQELIQSIKAKGMRPGVSLRPGTP 125
Query: 125 VEYLAPWA---NQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVGPD 181
VE + P N +++ LVMTVEPGFGGQKFM +MM KV LR ++PSLDIEVDGG+GP
Sbjct: 126 VEEVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMEKVRALRKKYPSLDIEVDGGLGPS 185
Query: 182 TVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSEAAQKRS 225
T+ A AGAN IV+GS+I + +P VI+ LR E +Q +S
Sbjct: 186 TIDVAASAGANCIVAGSSIFGAAEPGEVISALRKSV-EGSQNKS 228
>1TQJ-A nrPDB
Length = 230
Score = 298 bits (762), Expect = 2e-81, Method: Composition-based stats.
Identities = 84/222 (37%), Positives = 133/222 (59%), Gaps = 8/222 (3%)
Query: 1 MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
M+ + PSIL++D + LG E + ++GAD++H+DVMDG FVPNIT G +V+++R
Sbjct: 1 MSKNIVVAPSILSADFSRLGEEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPL 60
Query: 61 LGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLE--ATENPGALIKDIRENGMKVGLA 118
+ D+H+M+ +PE++V+ A AGA+ + H+E A+ + + IRE G K G
Sbjct: 61 TKKT--LDVHLMIVEPEKYVEDFAKAGADIISVHVEHNASPHLHRTLCQIRELGKKAGAV 118
Query: 119 IKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLD----IEV 174
+ P T +++L D+ L+M+V PGFGGQ F+ +++PK+ LR IEV
Sbjct: 119 LNPSTPLDFLEYVLPVCDLILIMSVNPGFGGQSFIPEVLPKIRALRQMCDERGLDPWIEV 178
Query: 175 DGGVGPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNV 216
DGG+ P+ + EAGAN IV+GSA+ + + I +RN
Sbjct: 179 DGGLKPNNTWQVLEAGANAIVAGSAVFNAPNYAEAIAGVRNS 220
>2FLI-A nrPDB
Length = 220
Score = 294 bits (753), Expect = 2e-80, Method: Composition-based stats.
Identities = 96/219 (43%), Positives = 132/219 (60%), Gaps = 6/219 (2%)
Query: 3 SGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLG 62
S KI PSIL +D AN +E R+ ++ A+Y+H+D+MDG FVPNI+FG VV S+RK
Sbjct: 2 STLKIAPSILAADYANFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKH-- 59
Query: 63 QDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPG 122
FD H+MV PE++V+ A AGA+ T H E+T + ++ I+ GMK G+ I PG
Sbjct: 60 SKLVFDCHLMVVDPERYVEAFAQAGADIMTIHTESTRHIHGALQKIKAAGMKAGVVINPG 119
Query: 123 TSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKV----HWLRTQFPSLDIEVDGGV 178
T L P + +D L+MTV PGFGGQ F+ + + KV W + S DIEVDGGV
Sbjct: 120 TPATALEPLLDLVDQVLIMTVNPGFGGQAFIPECLEKVATVAKWRDEKGLSFDIEVDGGV 179
Query: 179 GPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVC 217
T+ C EAGAN+ V+GS + ++ D S + LR
Sbjct: 180 DNKTIRACYEAGANVFVAGSYLFKASDLVSQVQTLRTAL 218
>5UMF-A nrPDB
Length = 235
Score = 293 bits (749), Expect = 6e-80, Method: Composition-based stats.
Identities = 85/227 (37%), Positives = 127/227 (55%), Gaps = 10/227 (4%)
Query: 3 SGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLG 62
+ +I PSIL++D A LG E ++ +GAD +H DVMD H+VPN+TFG V +L+
Sbjct: 10 TAYRIAPSILSADFARLGEEVANVIAAGADLIHFDVMDNHYVPNLTFGPMVCAALKPY-- 67
Query: 63 QDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPG 122
D+H+MV + ++ A AGA+ TFH EA+ + + IR+ G + GL + P
Sbjct: 68 ASVPIDVHLMVEPVDDLIQSFAKAGASIITFHPEASRHIDRSLSLIRDMGCQAGLVLNPA 127
Query: 123 TSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLD--------IEV 174
T V L +++DM L+M+V PGFGGQ F+ + K+ +R + IEV
Sbjct: 128 TPVYVLENVLDRLDMVLLMSVNPGFGGQSFIPHTLEKIRQVRAMLDRYEGKSGRRIAIEV 187
Query: 175 DGGVGPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSEAA 221
DGG+ D + A AGA+ V+GSAI D ++VI +R +AA
Sbjct: 188 DGGIKTDNIAAVARAGADTFVAGSAIFGKPDYKAVIAAMRAELEKAA 234
>4NU7-A nrPDB
Length = 246
Score = 288 bits (738), Expect = 1e-78, Method: Composition-based stats.
Identities = 115/226 (50%), Positives = 160/226 (70%), Gaps = 9/226 (3%)
Query: 1 MASGCK--IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLR 58
M+S K I PS+L SDL++L ++ RM+D+G D+LHLD+MDGHFVPNI+FG VV++LR
Sbjct: 1 MSSQLKPIICPSVLASDLSSLASDAKRMVDAGCDWLHLDIMDGHFVPNISFGPGVVKALR 60
Query: 59 KQLGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEAT----ENPGALIKDIRENGMK 114
L + FFD+H+MVS+PE+W++P A AGAN TFH E+ + L K I+ G+K
Sbjct: 61 GHL-KSAFFDVHLMVSEPEKWIQPFADAGANSITFHWESVGGDLQRAAELAKRIQARGIK 119
Query: 115 VGLAIKPGTSVEYL--APWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDI 172
GLAIKP T E L A + DM LVMTVEPGFGGQKFM DM+ KV R+ FP L+I
Sbjct: 120 AGLAIKPATKFEDLGEALAGDNFDMLLVMTVEPGFGGQKFMADMLQKVRTARSLFPKLNI 179
Query: 173 EVDGGVGPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCS 218
+VDGG+ +TV A AGAN+IV+G+++ ++E+P +++ +R+V +
Sbjct: 180 QVDGGLDGETVKPAASAGANVIVAGTSMFKAENPAALMTFMRDVIA 225
>3INP-A nrPDB
Length = 246
Score = 285 bits (729), Expect = 1e-77, Method: Composition-based stats.
Identities = 84/221 (38%), Positives = 131/221 (59%), Gaps = 5/221 (2%)
Query: 3 SGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLG 62
+I PSIL++DLA LG + +L +GAD +H DVMD H+VPN+TFG V+++LR G
Sbjct: 26 KHIQINPSILSADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALR-DYG 84
Query: 63 QDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPG 122
D+H+MV + ++ A AGA FH EA+E+ ++ I+ G++ GLA+ P
Sbjct: 85 ITAGMDVHLMVKPVDALIESFAKAGATSIVFHPEASEHIDRSLQLIKSFGIQAGLALNPA 144
Query: 123 TSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKV----HWLRTQFPSLDIEVDGGV 178
T ++ L + ID L+M+V PGFGGQKF+ M+ K W+ + + +E+DGGV
Sbjct: 145 TGIDCLKYVESNIDRVLIMSVNPGFGGQKFIPAMLDKAKEISKWISSTDRDILLEIDGGV 204
Query: 179 GPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSE 219
P + + A G N V+GSAI S+ + I+ +R+ ++
Sbjct: 205 NPYNIAEIAVCGVNAFVAGSAIFNSDSYKQTIDKMRDELNK 245
>1TQX-A nrPDB
Length = 227
Score = 283 bits (723), Expect = 6e-77, Method: Composition-based stats.
Identities = 102/223 (45%), Positives = 146/223 (65%), Gaps = 9/223 (4%)
Query: 7 IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPF 66
I PS+L S+++ L E RM GA+++HLDVMD HFVPN++FG PV+ +L+K + F
Sbjct: 8 IAPSVLASNISKLAEETQRMESLGAEWIHLDVMDMHFVPNLSFGPPVINNLKK-YTKSIF 66
Query: 67 FDMHMMVSKPEQWVKPMAVAGANQYTFHLEA----TENPGALIKDIRENGMKVGLAIKPG 122
FD+H+MV PE++V + +NQ TFH EA TE L K+IR+N + G++IKP
Sbjct: 67 FDVHLMVEYPEKYVPLL--KTSNQLTFHFEALNEDTERCIQLAKEIRDNNLWCGISIKPK 124
Query: 123 TSVEYLAPWAN--QIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVGP 180
T V+ L P + I+ LVMTVEPGFGGQ FM DMM KV +LR ++ +L+I+VDGG+
Sbjct: 125 TDVQKLVPILDTNLINTVLVMTVEPGFGGQSFMHDMMGKVSFLRKKYKNLNIQVDGGLNI 184
Query: 181 DTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSEAAQK 223
+T A GAN+IV+G++I +EDP+ VI+ +R +
Sbjct: 185 ETTEISASHGANIIVAGTSIFNAEDPKYVIDTMRVSVQKYLNN 227
>1RPX-A nrPDB
Length = 230
Score = 282 bits (721), Expect = 1e-76, Method: Composition-based stats.
Identities = 84/220 (38%), Positives = 125/220 (56%), Gaps = 8/220 (3%)
Query: 3 SGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLG 62
S + PSIL+++ + LG + + +G D++H+DVMDG FVPNIT G VV+SLR
Sbjct: 9 SDIIVSPSILSANFSKLGEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPI-- 66
Query: 63 QDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLE--ATENPGALIKDIRENGMKVGLAIK 120
D D+H+M+ +P+Q V AGA+ + H E +T + I I+ G K G+ +
Sbjct: 67 TDLPLDVHLMIVEPDQRVPDFIKAGADIVSVHCEQSSTIHLHRTINQIKSLGAKAGVVLN 126
Query: 121 PGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLD----IEVDG 176
PGT + + + +D+ L+M+V PGFGGQ F+E + K+ LR IEVDG
Sbjct: 127 PGTPLTAIEYVLDAVDLVLIMSVNPGFGGQSFIESQVKKISDLRKICAERGLNPWIEVDG 186
Query: 177 GVGPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNV 216
GVGP +K EAGAN +V+GSA+ + D I ++
Sbjct: 187 GVGPKNAYKVIEAGANALVAGSAVFGAPDYAEAIKGIKTS 226
>3CT7-A nrPDB
Length = 231
Score = 251 bits (640), Expect = 2e-67, Method: Composition-based stats.
Identities = 78/223 (34%), Positives = 118/223 (52%), Gaps = 10/223 (4%)
Query: 5 CKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQD 64
KI PS++ DL + +DS ADY H+D+MDGHFVPN+T S K+L
Sbjct: 1 MKISPSLMCMDLLKFKEQI-EFIDSHADYFHIDIMDGHFVPNLTLSP-FFVSQVKKLATK 58
Query: 65 PFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPG-ALIKDIRENGMKVGLAIKPGT 123
P D H+MV++P+ ++ +A AGA+ T H E LI +IR + MKVGL + P T
Sbjct: 59 P-LDCHLMVTRPQDYIAQLARAGADFITLHPETINGQAFRLIDEIRRHDMKVGLILNPET 117
Query: 124 SVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKV----HWLRTQFPSLDIEVDGGVG 179
VE + + ++ D VMTV+PGF GQ F+ +M+ K+ W + +IEVDG
Sbjct: 118 PVEAMKYYIHKADKITVMTVDPGFAGQPFIPEMLDKLAELKAWREREGLEYEIEVDGSCN 177
Query: 180 PDTVHKCAEAGANMIVSGSA-IMR-SEDPRSVINLLRNVCSEA 220
T K AGA++ + G++ + +E+ ++ A
Sbjct: 178 QATYEKLMAAGADVFIVGTSGLFNHAENIDEAWRIMTAQILAA 220
>3CU2-A nrPDB
Length = 237
Score = 224 bits (570), Expect = 3e-59, Method: Composition-based stats.
Identities = 53/215 (24%), Positives = 96/215 (44%), Gaps = 21/215 (9%)
Query: 6 KIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDP 65
K+ IL+++ L E +L++ + LH D+ DG F T G + K
Sbjct: 15 KLSVGILSANWLQLNEEVTTLLENQINVLHFDIADGQFSSLFTVGAIGI----KYFPTHC 70
Query: 66 FFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMK---------VG 116
F D+H+MV + K + GAN T LE + I+ + + +G
Sbjct: 71 FKDVHLMVRNQLEVAKAVVANGANLVTLQLEQYHDFALTIEWLAKQKTTYANQVYPVLIG 130
Query: 117 LAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIE--- 173
+ P T + L P+ +QID+ ++T++P G + E ++ +V + + + +E
Sbjct: 131 ACLCPETPISELEPYLDQIDVIQLLTLDPRNGTKYPSELILDRVIQVEKRLGNRRVEKLI 190
Query: 174 -VDGGVGPDTVHKCAEAGANMI---VSGSAIMRSE 204
+DG + + + K + G + I VSGSA+ E
Sbjct: 191 NIDGSMTLE-LAKYFKQGTHQIDWLVSGSALFSGE 224
>2CZE-A nrPDB
Length = 208
Score = 41.9 bits (97), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/172 (18%), Positives = 68/172 (39%), Gaps = 9/172 (5%)
Query: 50 GHPVVESLRKQLGQDPFFDMHMM-VSKPEQWVK-PMAVAGANQYTFHLEATENPGALIKD 107
G ++ L+++ G + D+ + + + + + AGA+ H + +K+
Sbjct: 39 GVDIIRRLKEETGVEIIADLKLADIPNTNRLIARKVFGAGADYVIVHTFVGRDSVMAVKE 98
Query: 108 IRENGMKVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKF--MEDMMPKVHWLRT 165
+ E M V ++ PG +E++ P ++ +EP FG + + +
Sbjct: 99 LGEIIMVVEMS-HPGA-LEFINPLTDRFIEV-ANEIEP-FGVIAPGTRPERIGYIRDRLK 154
Query: 166 QFPSLDIEVDGGVGPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVC 217
+ + G G +AGA+ I+ G AI + +PR + +
Sbjct: 155 EGIKILAPGIGAQGGKAKDAV-KAGADYIIVGRAIYNAPNPREAAKAIYDEI 205
>3EXT-A nrPDB
Length = 221
Score = 39.2 bits (90), Expect = 0.002, Method: Composition-based stats.
Identities = 37/214 (17%), Positives = 72/214 (33%), Gaps = 11/214 (5%)
Query: 12 LNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHM 71
+ D +NL + G + +DV++ V + G +VE LR
Sbjct: 10 VALDHSNLKGAITAAVSVGNE---VDVIEAGTVCLLQVGSELVEVLRSLFPDKIIVADTK 66
Query: 72 MVSKPEQWVKPMAVAGANQYTFHLEAT----ENPGALIKDIRENGMKVGLAIKPGTSVEY 127
K AV GA+ T AT + I+DI + ++ + + + +
Sbjct: 67 CADAGGTVAKNNAVRGADWMTCICSATIPTMKAARKAIEDINPDKGEIQVELYGDWTYDQ 126
Query: 128 LAPWANQ--IDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVGPDTVHK 185
W + + + G+ + E + KV L + V GG+ DT+
Sbjct: 127 AQQWLDAGISQAIYHQSRDALLAGETWGEKDLNKVKKLIEMG--FRVSVTGGLSVDTLKL 184
Query: 186 CAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSE 219
++G I +++P ++
Sbjct: 185 FEGVDVFTFIAGRGITEAKNPAGAARAFKDEIKR 218
>1YTE-A nrPDB
Length = 398
Score = 38.1 bits (87), Expect = 0.003, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Query: 127 YLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIE--VDGGVGPDTVH 184
+A +++D + T G E ++ +V W DI+ V GG+ +TV
Sbjct: 229 KIAEMFDKVDYIRLDTPSSRRGN---FEALIREVRWELALRGRSDIKIMVSGGLDENTVK 285
Query: 185 KCAEAGANMIVSGSAIMRSEDPRSVINLL 213
K EAGA G++I ++ ++++
Sbjct: 286 KLREAGAEAFGVGTSISSAKPFDFAMDIV 314
>3F4W-A nrPDB
Length = 211
Score = 38.1 bits (87), Expect = 0.004, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 135 IDMALVMT-VEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVGPDTVHKCAEAGANM 193
DM V T + G+K ++D++ + R I V GG+ TV A G ++
Sbjct: 128 ADMLAVHTGTDQQAAGRKPIDDLITMLKVRRKA----RIAVAGGISSQTVKDYALLGPDV 183
Query: 194 IVSGSAIMRSEDPRSVINLLRNVC 217
++ GSAI + DP + V
Sbjct: 184 VIVGSAITHAADPAGEARKISQVL 207
>1XI3-A nrPDB
Length = 215
Score = 37.3 bits (85), Expect = 0.005, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 163 LRTQFPSLDIEVD--GGVGPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSE 219
LR S+ I V GG+ D + + G + I SA+M +ED R LR + E
Sbjct: 154 LRKIVESVKIPVVAIGGINKDNAREVLKTGVDGIAVISAVMGAEDVRKATEELRKIVEE 212
>3O15-A nrPDB
Length = 235
Score = 37.3 bits (85), Expect = 0.006, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 27/59 (45%)
Query: 160 VHWLRTQFPSLDIEVDGGVGPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCS 218
+ +R Q S+ I GG+ D +AGA+ + SAI ++EDP S R
Sbjct: 171 IEAVRRQGISIPIVGIGGITIDNAAPVIQAGADGVSMISAISQAEDPESAARKFREEIQ 229
>2DZS-A nrPDB
Length = 248
Score = 35.0 bits (79), Expect = 0.029, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 50/145 (34%), Gaps = 4/145 (2%)
Query: 79 WVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPGTSVEYLAPWANQID-M 137
++ +G + + + RE G+K P T E L +
Sbjct: 100 FLAAAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDERLKVIDDMTTGF 159
Query: 138 ALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGV-GPDTVHKCAEAGANMIVS 196
++++ G ++ + + + + V GV + V + GAN +V
Sbjct: 160 VYLVSLYGTTGAREEIPKTAYDLLRRAKRICRNKVAVGFGVSKREHVVSLLKEGANGVVV 219
Query: 197 GSAIMR--SEDPRSVINLLRNVCSE 219
GSA+++ E R L+ E
Sbjct: 220 GSALVKIIGEKGREATEFLKKKVEE 244
>3O63-A nrPDB
Length = 243
Score = 34.2 bits (77), Expect = 0.049, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 176 GGVGPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSEA 220
GG+ + +AGA IV AI ++DPR+ LR+ + A
Sbjct: 198 GGINAQRLPAVLDAGARRIVVVRAITSADDPRAAAEQLRSALTAA 242
>2ISS-A nrPDB
Length = 313
Score = 33.5 bits (75), Expect = 0.085, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 42/120 (35%), Gaps = 4/120 (3%)
Query: 96 EATENPGALIKDIRENGMKVGLAIKPGTSVEYLAPWANQIDMALVMTVEP--GFGGQKFM 153
EA IR G + G +V+++ QI M E +G +
Sbjct: 155 EALRRIAEGAAMIRTKG-EAGTG-NVVEAVKHMRRVMEQIKQVTKMEDEELVAYGKEIGA 212
Query: 154 EDMMPKVHWLRTQFPSLDIEVDGGVGPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLL 213
+ + + P ++ G P GA+ + GS I +S+DPR + +
Sbjct: 213 PVELLREVKRLGRLPVVNFAAGGVATPADAALMMMLGADGVFVGSGIFKSKDPRKMAKAM 272
>3QH2-A nrPDB
Length = 221
Score = 33.1 bits (74), Expect = 0.10, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 22/51 (43%)
Query: 176 GGVGPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSEAAQKRSL 226
GG+ PD + +AGA+ I S I S +P E +++L
Sbjct: 171 GGMTPDRLRDVKQAGADGIAVMSGIFSSAEPLEAARRYSRKLKEMRYEKAL 221
>3TSB-A nrPDB
Length = 511
Score = 33.1 bits (74), Expect = 0.11, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 8/86 (9%)
Query: 112 GMKVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLD 171
G VG+ T ++ L +D ++ T G ++ KV +R ++PSL+
Sbjct: 248 GAAVGVTADAMTRIDAL--VKASVDAIVLDTAHGHSQG------VIDKVKEVRAKYPSLN 299
Query: 172 IEVDGGVGPDTVHKCAEAGANMIVSG 197
I + EAGAN++ G
Sbjct: 300 IIAGNVATAEATKALIEAGANVVKVG 325
>4MM1-A nrPDB
Length = 250
Score = 32.7 bits (73), Expect = 0.12, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 38/81 (46%), Gaps = 8/81 (9%)
Query: 143 VEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGV-GPDTVHKCAEAGANMIVSGSAIM 201
+E G G + + + M L + + V GG+ + + A AGA+++V+G+ +
Sbjct: 173 LEAGSGAPEHVPEEM---IALVKRCTDQILIVGGGIRSGEDAARVAGAGADVVVTGTVVE 229
Query: 202 RSED----PRSVINLLRNVCS 218
S++ R ++ + +V
Sbjct: 230 NSDNVEDKIREIVEGMGSVLE 250
>4MJM-A nrPDB
Length = 385
Score = 32.7 bits (73), Expect = 0.13, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 8/86 (9%)
Query: 112 GMKVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLD 171
G VG+ T ++ L +D ++ T G ++ KV +R ++PSL+
Sbjct: 122 GAAVGVTADAMTRIDAL--VKASVDAIVLDTAHGHSQG------VIDKVKEVRAKYPSLN 173
Query: 172 IEVDGGVGPDTVHKCAEAGANMIVSG 197
I + EAGAN++ G
Sbjct: 174 IIAGNVATAEATKALIEAGANVVKVG 199
>6NKE-A nrPDB
Length = 252
Score = 32.3 bits (72), Expect = 0.18, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 148 GGQKFMEDMMPKVHWLRTQFPSLDIEVDGGV-GPDTVHKCAEAGANMIVSGSAIMRSEDP 206
G + +++++ ++ + V GG+ P+T + A AGA+MIV+GS +E
Sbjct: 174 GSGAPRPVSEDTISYVKSKI-NIPLIVGGGIRDPETAMRIALAGADMIVTGSI---AEKS 229
Query: 207 RSVINLLRNVCSE 219
+V ++LRN+ +
Sbjct: 230 NNVYSVLRNIIGK 242
>3IEB-A nrPDB
Length = 218
Score = 32.3 bits (72), Expect = 0.18, Method: Composition-based stats.
Identities = 32/189 (16%), Positives = 64/189 (33%), Gaps = 8/189 (4%)
Query: 35 HLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSKPEQWVKPMA-VAGANQYTF 93
++DV++ + G V +LR M + + MA AGA+ T
Sbjct: 31 YVDVIEVGTILAFAEGMKAVSTLRHNHPNHILV-CDMKTTDGGAILSRMAFEAGADWITV 89
Query: 94 HLEATENPGALIKDIRE-NGMKVGLAIKPGTSVEYLAPWANQ--IDMALVMTVEPGFGGQ 150
A A K + + ++ + I +++ W + + + G
Sbjct: 90 SAAAHIATIAACKKVADELNGEIQIEIYGNWTMQDAKAWVDLGITQAIYHRSRDAELAGI 149
Query: 151 KFMEDMMPKVHWLRTQFPSLDIEVDGGVGPDTVHKCAEAGANMIVSGSAIMRSEDPRSVI 210
+ D + K+ L L I GG+ P+ ++ ++G A+ +E +
Sbjct: 150 GWTTDDLDKMRQLSALGIELSIT--GGIVPEDIYLFEGIKTKTFIAGRALAGAEG-QQTA 206
Query: 211 NLLRNVCSE 219
LR
Sbjct: 207 AALREQIDR 215
>5ELW-A nrPDB
Length = 205
Score = 31.9 bits (71), Expect = 0.21, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 39 MDGHFVPNITFGHPVVESLRKQLGQDPFFDMHM 71
+DGH V + + G P ++ + QL FD+H+
Sbjct: 28 LDGHGVSDSSTGIPFLDHMLDQLASHGLFDVHV 60
>4JEJ-A nrPDB
Length = 244
Score = 31.9 bits (71), Expect = 0.22, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Query: 140 VMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGG-VGPDTVHKCAEAGANMIVSGS 198
++ +E G G +K + M V +Q + I V GG V + K AGA+++V G+
Sbjct: 176 LIYLEAGSGAKKPVPLEMISVI---SQNVEIPIIVGGGIVDLHGIKKAYNAGADLVVIGT 232
Query: 199 A 199
A
Sbjct: 233 A 233
>4L22-A nrPDB
Length = 758
Score = 31.9 bits (71), Expect = 0.26, Method: Composition-based stats.
Identities = 31/168 (18%), Positives = 63/168 (37%), Gaps = 35/168 (20%)
Query: 17 ANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSKP 76
+ + ++++D D +H+ MD HF ++ + + K PF+D+ P
Sbjct: 352 SQYKDDAVQIIDRD-DRVHMAHMDIHFSTSVNGVAALHTDILKNSELKPFYDI-----YP 405
Query: 77 EQWVKPMAVAGANQYTFH--LE-ATENPGALIKDIRENGMKVGLAIKPGTSVEYLAPWAN 133
E++ N TF LE A ++ A IK++ G ++ T +E L
Sbjct: 406 EKF-----NNKTNGITFRRWLEFANQDLAAYIKELIGEGY-----LEDATELEKLL---- 451
Query: 134 QIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVGPD 181
F K + + + K+ + ++ + G+ D
Sbjct: 452 ------------AFADDKTVHEQLAKIKFNNKLALKRYLKENKGINLD 487
>1TJR-A nrPDB
Length = 261
Score = 31.5 bits (70), Expect = 0.29, Method: Composition-based stats.
Identities = 37/221 (16%), Positives = 78/221 (35%), Gaps = 32/221 (14%)
Query: 15 DLANLGAECLRMLDSGADYLHLDV--MDGHFVPNITFGHPVVESLRKQLGQDPFFDMHM- 71
DLA + GAD + L V D P I G + S+ + L D +
Sbjct: 29 DLATTAEALRLLDGCGADVIELGVPCSD----PYID-GPIIQASVARALASGTTMDAVLE 83
Query: 72 MVSKP------------------EQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGM 113
M+ + + + M AG + +L + + N +
Sbjct: 84 MLREVTPELSCPVVLLSYYKPIMSRSLAEMKEAGVHGLIVPDLPYVAAHSLWSEAKNNNL 143
Query: 114 KVGLAIKPGTSVEYLAPWANQID-MALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDI 172
++ L P + + + +++V G + + + + + + +
Sbjct: 144 ELVLLTTPAIPEDRMKEITKASEGFVYLVSVNGVTGPRANVNPRVESLIQEVKKVTNKPV 203
Query: 173 EVDGGV-GPDTVHKCAEAGANMIVSGSAIMR----SEDPRS 208
V G+ P+ V + A+ GA+ ++ GSA++R + P+
Sbjct: 204 AVGFGISKPEHVKQIAQWGADGVIIGSAMVRQLGEAASPKQ 244
>2NV2-A nrPDB
Length = 294
Score = 31.5 bits (70), Expect = 0.31, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 43/119 (36%), Gaps = 14/119 (11%)
Query: 96 EATENPGALIKDIRENGMKVGLAIKPGTS-----VEYLAPWANQIDMALVMTVEPGFGGQ 150
EAT +R G +PGT V ++ Q+ + M+ +
Sbjct: 134 EATRRIAEGASMLRTKG-------EPGTGNIVEAVRHMRKVNAQVRKVVAMSEDELMTEA 186
Query: 151 KFMEDMMPKVHWLRT--QFPSLDIEVDGGVGPDTVHKCAEAGANMIVSGSAIMRSEDPR 207
K + + ++ + P ++ G P + GA+ + GS I +S++P
Sbjct: 187 KNLGAPYELLLQIKKDGKLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKSDNPA 245
>3QOK-A nrPDB
Length = 420
Score = 31.1 bits (69), Expect = 0.39, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 36/91 (39%), Gaps = 14/91 (15%)
Query: 83 MAVAGA-NQYTFHLEATENPGALIKDIRE-----NGMKVGLAIKPGTS-----VEYLAPW 131
V GA +N AL+K +RE + + + + V+ +AP
Sbjct: 157 FPVNGAWGLVASQPADRDNFTALLKSLREAVGEQKLVTIAVGANAESPKSWVDVKAVAPV 216
Query: 132 ANQIDMALVMTVEPGFGGQKFMEDMMPKVHW 162
N I+ +MT + +G Q F ++ HW
Sbjct: 217 LNYIN---LMTYDMAYGTQYFNSNLYDSSHW 244
>4WY0-A nrPDB
Length = 305
Score = 31.1 bits (69), Expect = 0.39, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 42/118 (35%), Gaps = 14/118 (11%)
Query: 96 EATENPGALIKDIRENGMKVGLAIKPGTS-----VEYLAPWANQIDMALVMTVEPGFGGQ 150
EA +R G +PGT V ++ QI + M+ +
Sbjct: 144 EAARRIAEGASMLRTKG-------EPGTGNIVEAVRHMRKVNAQIRKVVNMSEDELVAEA 196
Query: 151 KFMEDMMPKVHWLRT--QFPSLDIEVDGGVGPDTVHKCAEAGANMIVSGSAIMRSEDP 206
K + + + ++ + P ++ G P GA+ + GS I +SE+P
Sbjct: 197 KQLGAPVEVLREIKRLGRLPVVNFAAGGVTTPADAALMMHLGADGVFVGSGIFKSENP 254
>3GNN-A nrPDB
Length = 298
Score = 30.8 bits (68), Expect = 0.48, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 33/89 (37%), Gaps = 13/89 (14%)
Query: 115 VGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQK-----FMEDMMPKVHWLRTQFPS 169
A+ V+ +Q+ AL G + F DMM +R
Sbjct: 202 AAFALNAEVPVQIEVETLDQLRTAL------AHGARSVLLDNFTLDMMRD--AVRVTEGR 253
Query: 170 LDIEVDGGVGPDTVHKCAEAGANMIVSGS 198
+EV GGV DTV AE G + I G+
Sbjct: 254 AVLEVSGGVNFDTVRAIAETGVDRISIGA 282
>2HTM-A nrPDB
Length = 268
Score = 30.8 bits (68), Expect = 0.57, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Query: 174 VDGGVG-PDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSEA 220
VD G+G P + E G + ++ +AI ++DP ++ R
Sbjct: 183 VDAGLGLPSHAAEVMELGLDAVLVNTAIAEAQDPPAMAEAFRLAVEAG 230
>3FY4-A nrPDB
Length = 537
Score = 30.4 bits (67), Expect = 0.59, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 21/46 (45%)
Query: 66 FFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIREN 111
D H M S P + + AG N+ F LE+ ++ + +K +
Sbjct: 38 VIDPHYMESDPSAFSPGSSRAGVNRIRFLLESLKDLDSSLKKLGSR 83
>1TYG-A nrPDB
Length = 253
Score = 30.4 bits (67), Expect = 0.61, Method: Composition-based stats.
Identities = 11/48 (22%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Query: 174 VDGGVG-PDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSEA 220
VD G+G P E GA+ ++ +A+ ++DP + ++
Sbjct: 181 VDAGIGSPKDAAYAMELGADGVLLNTAVSGADDPVKMARAMKLAVEAG 228
>4X2R-A nrPDB
Length = 250
Score = 30.4 bits (67), Expect = 0.66, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 44/108 (40%), Gaps = 9/108 (8%)
Query: 14 SDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMM- 72
+D + +++GA+++HL +D FG L +++ + + +
Sbjct: 30 TDYGSPIEAARDWVEAGAEWIHLVDLDA------AFGRGSNAPLLERIVGEVGIKVELSG 83
Query: 73 -VSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAI 119
+ + + AGA + A E+P + I E+G K+ + +
Sbjct: 84 GIRDDASLTRAL-KAGAARVNLGTAALEDPQWTARVIAEHGEKIAVGL 130
>6GB2-BE nrPDB
Length = 348
Score = 30.0 bits (66), Expect = 0.78, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 33/92 (35%), Gaps = 10/92 (10%)
Query: 68 DMHMMVSKPEQ----WVKPMAVAGANQYTFH-----LEATENPGALIKD-IRENGMKVGL 117
D H++ P++ + + V G FH LE + G K ++ +
Sbjct: 126 DCHVLKYTPKENHNGRMAALTVGGKTVSHFHKSASILEFYQELGLPPKQKVKIFNVTENA 185
Query: 118 AIKPGTSVEYLAPWANQIDMALVMTVEPGFGG 149
IKPGT + Q T+ GF G
Sbjct: 186 VIKPGTPLYAAHFRPGQYVDVTAKTIGKGFQG 217
>4CE4-E nrPDB
Length = 399
Score = 30.0 bits (66), Expect = 0.78, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 33/92 (35%), Gaps = 10/92 (10%)
Query: 68 DMHMMVSKPEQ----WVKPMAVAGANQYTFH-----LEATENPGALIKD-IRENGMKVGL 117
D H++ P++ + + V G FH LE + G K ++ +
Sbjct: 177 DCHVLKYTPKENHNGRMAALTVGGKTVSHFHKSASILEFYQELGLPPKQKVKIFNVTENA 236
Query: 118 AIKPGTSVEYLAPWANQIDMALVMTVEPGFGG 149
IKPGT + Q T+ GF G
Sbjct: 237 VIKPGTPLYAAHFRPGQYVDVTAKTIGKGFQG 268
>3W7D-A nrPDB
Length = 313
Score = 29.6 bits (65), Expect = 1.1, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Query: 146 GFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGV-GPDTVHKCAEAGANMIVSGSAIMRSE 204
G GG+ + + V+ + P + GGV + AGA+M+ G+A+ E
Sbjct: 220 GLGGKYILPTALANVNAFYRRCPDKLVFGCGGVYSGEDAFLHILAGASMVQVGTAL--QE 277
Query: 205 DPRSVINLLRNVCSEAAQKR 224
+ + L + E ++
Sbjct: 278 EGPGIFTRLEDELLEIMARK 297
>4ADT-A nrPDB
Length = 297
Score = 29.6 bits (65), Expect = 1.2, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 22/49 (44%)
Query: 165 TQFPSLDIEVDGGVGPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLL 213
+ P ++ G P C + G + + GS I SE+P+ + + +
Sbjct: 206 KRLPVVNFAAGGIATPADAAMCMQLGMDGVFVGSGIFESENPQKMASSI 254
>3AJX-A nrPDB
Length = 207
Score = 29.6 bits (65), Expect = 1.3, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 174 VDGGVGPDTVHKCAEAGANMIVSGSAIMR 202
V GGV T+ +AGA + V+G AI
Sbjct: 163 VAGGVKVATIPAVQKAGAEVAVAGGAIYG 191
>5DLC-A nrPDB
Length = 256
Score = 29.2 bits (64), Expect = 1.5, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 60/164 (36%), Gaps = 16/164 (9%)
Query: 75 KPEQWVKPMAVAGANQYTFHL-EATENPG----ALIKDI--RENGMKVGLAIKPGTSVEY 127
P + AGA+ T HL E + ++K++ ++G+ + E
Sbjct: 37 DPVKAALDAEEAGADGITVHLREDRRHIQERDVRVLKEVLQTRMNFEMGVTEEMLAFAEE 96
Query: 128 LAPWANQI--DMALVMTVEPGF--GGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVGPDTV 183
+ P + + + +T E G GQ+ + + V L + + +D P +
Sbjct: 97 IRPAHSCLVPERREELTTEGGLDVAGQE--QRIRDAVRRLAAVGSEVSLFIDP--DPRQI 152
Query: 184 HKCAEAGANMIVSGSAIM-RSEDPRSVINLLRNVCSEAAQKRSL 226
A GA I + +EDP L+ V A RSL
Sbjct: 153 EASARVGAPAIELHTGRYADAEDPEEQARELQRVREGVALGRSL 196
>5XFW-A nrPDB
Length = 334
Score = 29.2 bits (64), Expect = 1.6, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 38/98 (38%), Gaps = 6/98 (6%)
Query: 131 WANQIDMALVMTVEPGFGG---QKFMEDMMPKVHWLRTQFPSLDIEVDGGV-GPDTVHKC 186
+ + +V+ + GFGG + + + V+ + P + GGV +
Sbjct: 223 VIDPANETVVIKPKQGFGGLGGKYVLPTALANVNAFFRRCPDKLVFGCGGVYSGEEAFLH 282
Query: 187 AEAGANMIVSGSAIMRSEDPRSVINLLRNVCSEAAQKR 224
AGA+M+ G+A+ ++ + L E +
Sbjct: 283 ILAGASMVQVGTAL--HDEGPIIFARLNKELQEIMTNK 318
>3ZID-A nrPDB
Length = 373
Score = 29.2 bits (64), Expect = 1.6, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 25/64 (39%), Gaps = 5/64 (7%)
Query: 109 RENGMKVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFP 168
R G + G +E + + D+ VMT G G F M +H L+ ++
Sbjct: 79 RSKGKQ-GFWENQEMILEEIEKRGD-FDLIFVMTSVSGGTGSSFSPLM---IHELKKRYK 133
Query: 169 SLDI 172
+ I
Sbjct: 134 NATI 137
>5H05-A nrPDB
Length = 640
Score = 29.2 bits (64), Expect = 1.6, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 30/76 (39%), Gaps = 9/76 (11%)
Query: 94 HLEATENPGALIKDIRENGMKVGLAIKP---GTSVEYLAPWANQIDMALVMT-----VEP 145
H + + I GM + + P VE WA+++D T V+P
Sbjct: 42 HKGDLQGIIDSLDYIESLGMNA-IWLTPIFDSIPVEGQDHWADRLDATGYFTSNYFAVDP 100
Query: 146 GFGGQKFMEDMMPKVH 161
FG + ++++ K H
Sbjct: 101 RFGTMEQAKELVEKAH 116
>6F8N-A nrPDB
Length = 414
Score = 28.8 bits (63), Expect = 2.0, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 22/62 (35%)
Query: 101 PGALIKDIRENGMKVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKV 160
+ + + VG +K + A +D +MT + +G Q F ++
Sbjct: 168 LHKALDKGKLLTIAVGANVKSPQEWVDVKGIAPYLDYINLMTYDMAYGTQYFNSNLYDSK 227
Query: 161 HW 162
W
Sbjct: 228 QW 229
>5O0B-A nrPDB
Length = 162
Score = 28.8 bits (63), Expect = 2.0, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 35/95 (36%), Gaps = 4/95 (4%)
Query: 125 VEYLAPWANQIDMALV-MTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVGPDTV 183
++ A Q D +V + + P G +++ + + P+L +E G+ D V
Sbjct: 19 LDVFERAAAQFDEVIVAVLINPNKAGMFTVDERIEMIRESTADLPNLRVESGQGLLVDFV 78
Query: 184 HKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCS 218
E G N IV G + + + +
Sbjct: 79 R---ERGLNAIVKGLRTGTDFEYELQMAQMNKHIA 110
>4FIQ-A nrPDB
Length = 335
Score = 28.8 bits (63), Expect = 2.0, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 47/120 (39%), Gaps = 8/120 (6%)
Query: 94 HLEATENPGALIKDIRENGMKVGLAIKPGTSVEYLAPWANQIDMA--LVMTVEP---GFG 148
H+ LI+ + + + G+A K LA +I V+ EP GF
Sbjct: 169 HVRLVNENIRLIQRMTDEEIY-GVAEKFAEPYLRLAFSVKEISGLPKRVLENEPIYEGFT 227
Query: 149 GQKFMEDMMPKVHWLRT--QFPSLDIEVDGGVGPDTVHKCAEAGANMIVSGSAIMRSEDP 206
++ +ED+ + ++ + P ++ G P G + + GS I +S +P
Sbjct: 228 YREIVEDIYKILLEIKKLGRLPVVNFAAGGVATPADAALMMAMGMDGVFVGSGIFKSSNP 287
>1DBT-A nrPDB
Length = 239
Score = 28.4 bits (62), Expect = 2.5, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 178 VGPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLR 214
V T E G++ IV G +I ++EDP +R
Sbjct: 195 VRVATPAIAREKGSSAIVVGRSITKAEDPVKAYKAVR 231
>4ML9-A nrPDB
Length = 286
Score = 28.4 bits (62), Expect = 2.6, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 48/135 (35%), Gaps = 18/135 (13%)
Query: 83 MAVAGANQYTFHLEATENPGALIKDIRENGMKVGL-----------AIKPGTSVEYLAPW 131
+A++GA+ H E+ ++K + G+ V I T E
Sbjct: 131 IAMSGADGVHIHKSTLEDLKDVVKYAHKYGLLVDAYIGHPDDLHTFGISARTPEEVAEAA 190
Query: 132 ANQ----IDMALVMT--VEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVGPDTVHK 185
+DM +MT G + + ++ L + + +GG+
Sbjct: 191 KEMEKIGVDMIGLMTGMSYEGTAAGEIHPVIKERLSALVSSVKVPTL-AEGGINDTNYVA 249
Query: 186 CAEAGANMIVSGSAI 200
+ G N++V G++I
Sbjct: 250 FKDTGVNILVIGTSI 264
>5G1T-A nrPDB
Length = 256
Score = 28.1 bits (61), Expect = 3.1, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 148 GGQKFMEDMMPKVHWLRTQFPSLDIEVDGGV-GPDTVHKCAEAGANMIVSGSAIMRSED 205
G + + +P + L ++ ++V GGV + V +AG +V GS ++S D
Sbjct: 56 GAKDPAKRQIPLIKTLVA-GVNVPVQVGGGVRTEEDVAALLKAGVARVVIGSTAVKSPD 113
>1QT1-A nrPDB
Length = 387
Score = 28.1 bits (61), Expect = 3.2, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 11/65 (16%)
Query: 62 GQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFH-----------LEATENPGALIKDIRE 110
G+DPF D P + V+ +A GA+ TFH E E+ + + E
Sbjct: 21 GRDPFGDATRGALDPAESVRRLAELGAHGVTFHDDDLIPFGATDSERAEHIKRFRQGLDE 80
Query: 111 NGMKV 115
GMKV
Sbjct: 81 TGMKV 85
>5D0U-A nrPDB
Length = 714
Score = 28.1 bits (61), Expect = 3.4, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Query: 9 PSILNSDLANLGAECLRMLDSGADYLHLDVMD 40
P IL S+L+N E ++ D +H D+MD
Sbjct: 402 PEILRSNLSNTVLELKKL--GVEDLVHFDLMD 431
>3KBJ-A nrPDB
Length = 388
Score = 28.1 bits (61), Expect = 3.6, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 11/65 (16%)
Query: 62 GQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFH-----------LEATENPGALIKDIRE 110
G+DPF D P + V+ +A GA+ TFH E E+ + + +
Sbjct: 22 GRDPFGDATRRALDPVESVRRLAELGAHGVTFHDDDLIPFGSSDSEREEHVKRFRQALDD 81
Query: 111 NGMKV 115
GMKV
Sbjct: 82 TGMKV 86
>1T0O-A nrPDB
Length = 417
Score = 28.1 bits (61), Expect = 3.6, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 8/43 (18%)
Query: 26 MLDSGADYLHLD--------VMDGHFVPNITFGHPVVESLRKQ 60
+LD+G +Y+++D +DGH PN T ++ L K+
Sbjct: 43 LLDAGYNYVNIDDCWSMKDGRVDGHIAPNATRFPDGIDGLAKK 85
>1J5T-A nrPDB
Length = 242
Score = 28.1 bits (61), Expect = 3.8, Method: Composition-based stats.
Identities = 8/25 (32%), Positives = 17/25 (68%)
Query: 191 ANMIVSGSAIMRSEDPRSVINLLRN 215
N ++ G++IM++E+PR + +R
Sbjct: 215 VNAVLVGTSIMKAENPRRFLEEMRA 239
>1SO4-A nrPDB
Length = 216
Score = 27.7 bits (60), Expect = 3.9, Method: Composition-based stats.
Identities = 7/50 (14%), Positives = 19/50 (38%)
Query: 170 LDIEVDGGVGPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSE 219
+ V GG+ + + ++ ++G +I + P + +E
Sbjct: 164 FKVTVTGGLALEDLPLFKGIPIHVFIAGRSIRDAASPVEAARQFKRSIAE 213
>4WZH-A nrPDB
Length = 347
Score = 27.7 bits (60), Expect = 4.1, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 32/80 (40%), Gaps = 3/80 (3%)
Query: 146 GFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGV-GPDTVHKCAEAGANMIVSGSAIMRSE 204
G GG+ + V+ + P I GGV + AGA+M+ G+A+ E
Sbjct: 254 GLGGRYVFPTALANVNAFYRRCPGKLIFGCGGVYTGEDAFLHVLAGASMVQVGTAL--HE 311
Query: 205 DPRSVINLLRNVCSEAAQKR 224
+ ++ L + K+
Sbjct: 312 EGAAIFERLTAELLDVMAKK 331
>4MUZ-A nrPDB
Length = 229
Score = 27.7 bits (60), Expect = 4.1, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
Query: 157 MPKVHWLRTQFPSLDIEVDGGVGPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNV 216
+ ++ +R ++I G +G A A+ I+ G I S +P LR V
Sbjct: 168 IERLREIRKAAGDMEILCPG-IGAQKGSIEAVKYADGIIVGRGIYASGNPAEEARKLRRV 226
Query: 217 CS 218
Sbjct: 227 LK 228
>3GZ3-A nrPDB
Length = 354
Score = 27.7 bits (60), Expect = 4.1, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 146 GFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGV-GPDTVHKCAEAGANMIVSGSAI 200
G GG+ + + ++ + P I GGV + AGA+M+ G+A+
Sbjct: 254 GLGGRYVLPTALANINAFYRRCPGKLIFGCGGVYTGEDAFLHVLAGASMVQVGTAL 309
>1UJP-A nrPDB
Length = 271
Score = 27.7 bits (60), Expect = 4.4, Method: Composition-based stats.
Identities = 25/152 (16%), Positives = 53/152 (34%), Gaps = 8/152 (5%)
Query: 76 PEQWVKPMAVAGANQYTFH---LEATENPGALIKDIRENGMKVGLAIKP-GTSVEYLAPW 131
PE++ AGA + L ++I G++ + P T
Sbjct: 108 PERFFGLFKQAGATGVILPDLPPDEDPGLVRLAQEI---GLETVFLLAPTSTDARIATVV 164
Query: 132 ANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVGPDTVHKCAEAGA 191
+ ++V G ++ + + + + +L + V GV A A
Sbjct: 165 RHATGFVYAVSVTGVTGMRERLPEEVKDLVRRIKARTALPVAVGFGVSGKATAAQAAV-A 223
Query: 192 NMIVSGSAIMRSEDPRSVINLLRNVCSEAAQK 223
+ +V GSA++R+ + + L + Q+
Sbjct: 224 DGVVVGSALVRALEEGRSLAPLLQEIRQGLQR 255
>1Q0M-A nrPDB
Length = 117
Score = 27.7 bits (60), Expect = 4.4, Method: Composition-based stats.
Identities = 20/121 (16%), Positives = 36/121 (29%), Gaps = 30/121 (24%)
Query: 20 GAECLRMLDSGA--DYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSKPE 77
+ + A D LH + V++ R +L + H+ V +
Sbjct: 18 AESVKAIQEKMAANDDLHFQIR-----------ATVIKEQRAELAKH-----HLDVLWSD 61
Query: 78 QWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPGTSVEYLAPWANQIDM 137
+ P H E+ L+ + + + P T + L A QID
Sbjct: 62 YFKPP-----------HFESYPELHTLVNEAVKALSAAKASTDPATGQKALDYIA-QIDK 109
Query: 138 A 138
Sbjct: 110 I 110
>6G7T-A nrPDB
Length = 163
Score = 27.7 bits (60), Expect = 4.6, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 35/95 (36%), Gaps = 4/95 (4%)
Query: 125 VEYLAPWANQIDMALV-MTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVGPDTV 183
V+ A Q D +V + V P G +++ + V T P+L ++V G+ D V
Sbjct: 20 VDIFERAAAQFDEVVVAILVNPAKTGMFDLDERIAMVKESTTHLPNLRVQVGHGLVVDFV 79
Query: 184 HKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCS 218
G IV G + + + +
Sbjct: 80 R---SCGMTAIVKGLRTGTDFEYELQMAQMNKHIA 111
>3NBK-A nrPDB
Length = 177
Score = 27.7 bits (60), Expect = 4.9, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 35/95 (36%), Gaps = 4/95 (4%)
Query: 125 VEYLAPWANQIDMALV-MTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVGPDTV 183
V+ A Q D +V + V P G +++ + V T P+L ++V G+ D V
Sbjct: 38 VDIFERAAAQFDEVVVAILVNPAKTGMFDLDERIAMVKESTTHLPNLRVQVGHGLVVDFV 97
Query: 184 HKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCS 218
G IV G + + + +
Sbjct: 98 R---SCGMTAIVKGLRTGTDFEYELQMAQMNKHIA 129
>6NUW-E nrPDB
Length = 461
Score = 27.3 bits (59), Expect = 5.9, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 15/22 (68%), Gaps = 2/22 (9%)
Query: 68 DMHMMVSKPE--QWVKPMAVAG 87
D H+M+SKPE +W+ A+ G
Sbjct: 96 DCHLMISKPEKFKWLPSKALRG 117
>1O4U-A nrPDB
Length = 285
Score = 27.3 bits (59), Expect = 6.2, Method: Composition-based stats.
Identities = 17/105 (16%), Positives = 41/105 (39%), Gaps = 15/105 (14%)
Query: 94 HLEATENPGALIKDIRENGMKVGLAIKPGTSVEYLAPWANQI----DMALVMTVEPGFGG 149
HL+ + ++++R+ + K VE L + D+ ++ + P
Sbjct: 172 HLKMYGSAERAVQEVRKI---IPFTTKIEVEVENLEDALRAVEAGADIVMLDNLSP---- 224
Query: 150 QKFMEDMMPKVHWLRTQFPSLDIEVDGGVGPDTVHKCAEAGANMI 194
E++ ++ P++ +EV GG+ + V ++I
Sbjct: 225 ----EEVKDISRRIKDINPNVIVEVSGGITEENVSLYDFETVDVI 265
>2YZR-A nrPDB
Length = 330
Score = 27.3 bits (59), Expect = 6.3, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 19/43 (44%)
Query: 166 QFPSLDIEVDGGVGPDTVHKCAEAGANMIVSGSAIMRSEDPRS 208
+ P ++ G P + G++ + GS I +SE+P
Sbjct: 240 RLPVVNFAAGGVATPADAALMMQLGSDGVFVGSGIFKSENPLE 282
>6IG5-A nrPDB
Length = 470
Score = 26.9 bits (58), Expect = 7.0, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 15/30 (50%)
Query: 19 LGAECLRMLDSGADYLHLDVMDGHFVPNIT 48
L E L +G D L DV DG F P +T
Sbjct: 55 LTEEQRDGLLAGLDSLAQDVADGSFGPLVT 84
>1R30-A nrPDB
Length = 369
Score = 26.9 bits (58), Expect = 7.2, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 178 VGPDTVHKCAEAGANMIVSGSAIMRSEDPRS 208
+ T C AGAN I G ++ + +P
Sbjct: 291 MNEQTQAMCFMAGANSIFYGCKLLTTPNPEE 321
>3R67-A nrPDB
Length = 356
Score = 26.9 bits (58), Expect = 7.7, Method: Composition-based stats.
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 191 ANMIVSGSAIMRSEDPRSVINLL 213
AN +G A+ ++DP +I+ L
Sbjct: 279 ANSYCAGQALFDAKDPTKLIDRL 301
Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
Posted date: Jan 3, 2023 9:05 PM
Number of letters in database: 10,336,785
Number of sequences in database: 36,641
Lambda K H
0.310 0.138 0.369
Lambda K H
0.267 0.0427 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,775,721
Number of Sequences: 36641
Number of extensions: 350245
Number of successful extensions: 1337
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 55
Number of HSP's that attempted gapping in prelim test: 1214
Number of HSP's gapped (non-prelim): 124
length of query: 228
length of database: 10,336,785
effective HSP length: 94
effective length of query: 134
effective length of database: 6,892,531
effective search space: 923599154
effective search space used: 923599154
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.2 bits)
S2: 57 (26.5 bits)