BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q93K97 (209 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 1GA7-A nrPDB 426 e-120 1VIU-A nrPDB 83 8e-17 6EHH-A nrPDB 41 5e-04 5C8L-A nrPDB 40 8e-04 3Q91-A nrPDB 39 0.002 1SZ3-A nrPDB 37 0.006 5ANS-A nrPDB 35 0.015 6GLL-A nrPDB 35 0.016 5WS7-A nrPDB 35 0.016 5MZF-A nrPDB 33 0.090 1VHG-A nrPDB 33 0.11 1VK6-A nrPDB 32 0.18 5OTN-A nrPDB 32 0.19 6DBY-A nrPDB 32 0.25 5LPG-A nrPDB 31 0.34 2D6F-C nrPDB 31 0.42 2Z67-A nrPDB 30 0.78 2DSC-A nrPDB 29 1.4 5I8U-G nrPDB 29 1.7 2OTN-A nrPDB 28 3.1 1X9N-A nrPDB 28 4.1 3RC8-A nrPDB 27 5.4 4MEV-A nrPDB 27 5.5 2B0V-A nrPDB 27 6.7 4U3W-A nrPDB 27 8.2 >1GA7-A nrPDB Length = 209 Score = 426 bits (1095), Expect = e-120, Method: Compositional matrix adjust. Identities = 209/209 (100%), Positives = 209/209 (100%) Query: 1 MLKPDNLPVTFGKNDVEIIARETLYRGFFSLDLYRFRHRLFNGQMSHEVRREIFERGHAA 60 MLKPDNLPVTFGKNDVEIIARETLYRGFFSLDLYRFRHRLFNGQMSHEVRREIFERGHAA Sbjct: 1 MLKPDNLPVTFGKNDVEIIARETLYRGFFSLDLYRFRHRLFNGQMSHEVRREIFERGHAA 60 Query: 61 VLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLI 120 VLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLI Sbjct: 61 VLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLI 120 Query: 121 VKRTKPVLSFLASPGGTSERSSIMVGEVDATTASGIHGLADENEDIRVHVVSREQAYQWV 180 VKRTKPVLSFLASPGGTSERSSIMVGEVDATTASGIHGLADENEDIRVHVVSREQAYQWV Sbjct: 121 VKRTKPVLSFLASPGGTSERSSIMVGEVDATTASGIHGLADENEDIRVHVVSREQAYQWV 180 Query: 181 EEGKIDNAASVIALQWLQLHHQALKNEWA 209 EEGKIDNAASVIALQWLQLHHQALKNEWA Sbjct: 181 EEGKIDNAASVIALQWLQLHHQALKNEWA 209 >1VIU-A nrPDB Length = 203 Score = 82.8 bits (203), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 51/154 (33%), Positives = 86/154 (55%), Gaps = 5/154 (3%) Query: 50 RREIFERGHAAVLLPFDPVRDEVVLIEQIRIAAY-DTSETPWLLEMVAGMIEEGESVEDV 108 +RE+++RG+ A +L ++ + VVLI Q R+A + + +E+ L+E AG+++ E E Sbjct: 40 KREVYDRGNGATILLYNTKKKTVVLIRQFRVATWVNGNESGQLIESCAGLLDNDEP-EVC 98 Query: 109 ARREAIEEAGLIVKRTKPVLSFLASPGGTSERSSIMVGEV-DATTASGIHGLADENEDIR 167 R+EAIEE G V + + SPGG +E + E D A+ G+ E+EDI Sbjct: 99 IRKEAIEETGYEVGEVRKLFELYMSPGGVTELIHFFIAEYSDNQRANAGGGV--EDEDIE 156 Query: 168 VHVVSREQAYQWVEEGKIDNAASVIALQWLQLHH 201 V + QA + ++ G+I + +V+ L +LQ H Sbjct: 157 VLELPFSQALEMIKTGEIRDGKTVLLLNYLQTSH 190 >6EHH-A nrPDB Length = 176 Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 13/84 (15%) Query: 96 AGMIEEGESVEDVARREAIEEAGLIVKRTKPV----LSFLASPGGTSERSSIMVGEVDAT 151 G ++EGE++ED A+RE +EE+GL V V F+ SP +M +V Sbjct: 56 GGKVQEGETIEDGAKRELLEESGLSVDTLHKVGHISFEFVGSP-------ELM--DVHIF 106 Query: 152 TASGIHGLADENEDIRVHVVSREQ 175 +A +HG E+E++R +Q Sbjct: 107 SADHVHGTPTESEEMRPQWFQLDQ 130 >5C8L-A nrPDB Length = 182 Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 43/158 (27%), Positives = 65/158 (41%), Gaps = 13/158 (8%) Query: 51 REIFERGHAAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVAR 110 RE AA+++P P VV+I Q R A LE AG + E A+ Sbjct: 37 REYILHPGAAMMIPLLP-NGNVVMIHQYRHAVKKV-----FLEFPAGKRDHNEETLLTAK 90 Query: 111 REAIEEAGLIVKRTKPVLSFLASPGGTSERSSIMVGEVDATTASGIHGLADENEDIRVHV 170 RE +EE G K K + + G ++E + + A + + D+ + I V Sbjct: 91 RELLEETGYEAKDWKFLTTIHPVIGYSNEHIDLYL----ARDLTHLEQRLDQGQFIEVVE 146 Query: 171 VSREQAYQWVEEGKIDNAASVIALQWLQLHHQALKNEW 208 V Q V EGK+ + + I WL + L+ EW Sbjct: 147 VKPADLMQLVLEGKVSDVKTQIGAFWLD---KFLRGEW 181 >3Q91-A nrPDB Length = 218 Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust. Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 5/111 (4%) Query: 92 LEMVAGMIEE-GESVEDVARREAIEEAG--LIVKRTKPVLSFLASPGGTSERSSIMVGEV 148 +E+ AG++++ G S+E+VA +EA EE G L + V ++ + G T R ++ EV Sbjct: 97 VELCAGLVDQPGLSLEEVACKEAWEECGYHLAPSDLRRVATYWSGVGLTGSRQTMFYTEV 156 Query: 149 -DATTASGIHGLADENEDIRVHVVSREQAYQWVEEGKIDNAASVI-ALQWL 197 DA + GL +E E I V + E A + ++ I VI + W Sbjct: 157 TDAQRSGPGGGLVEEGELIEVVHLPLEGAQAFADDPDIPKTLGVIFGVSWF 207 >1SZ3-A nrPDB Length = 159 Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust. Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 2/64 (3%) Query: 69 RDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLIVKRTKPVL 128 R +++L+++ I + W + +G +E+GE+ +D A REA EE GL V+ K + Sbjct: 24 RGDILLVQEKGIPGHPEKAGLW--HIPSGAVEDGENPQDAAVREACEETGLRVRPVKFLG 81 Query: 129 SFLA 132 ++L Sbjct: 82 AYLG 85 >5ANS-A nrPDB Length = 175 Score = 35.4 bits (80), Expect = 0.015, Method: Compositional matrix adjust. Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 4/43 (9%) Query: 96 AGMIEEGESVEDVARREAIEEAGLIV----KRTKPVLSFLASP 134 G ++EGE++ED ARRE EE+GL V K + V F+ P Sbjct: 55 GGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVGEP 97 >6GLL-A nrPDB Length = 182 Score = 35.4 bits (80), Expect = 0.016, Method: Compositional matrix adjust. Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 4/43 (9%) Query: 96 AGMIEEGESVEDVARREAIEEAGLIV----KRTKPVLSFLASP 134 G ++EGE++ED ARRE EE+GL V K + V F+ P Sbjct: 62 GGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVGEP 104 >5WS7-A nrPDB Length = 156 Score = 35.4 bits (80), Expect = 0.016, Method: Compositional matrix adjust. Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 4/43 (9%) Query: 96 AGMIEEGESVEDVARREAIEEAGLIV----KRTKPVLSFLASP 134 G ++EGE++ED ARRE EE+GL V K + V F+ P Sbjct: 36 GGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVGEP 78 >5MZF-A nrPDB Length = 176 Score = 33.1 bits (74), Expect = 0.090, Method: Compositional matrix adjust. Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 5/80 (6%) Query: 96 AGMIEEGESVEDVARREAIEEAGLIVKRTKPVLSFLASPGGTSERSSIMVGEVDATTASG 155 G ++EGE++ED A+RE EE+GL V V + G E + + D+ Sbjct: 56 GGKVQEGETIEDGAKRELREESGLTVDTLHKVGQIMFEFVGEPELMDVHIFCTDS----- 110 Query: 156 IHGLADENEDIRVHVVSREQ 175 + G E++++R +Q Sbjct: 111 VQGTPVESDEMRPQWFQLDQ 130 >1VHG-A nrPDB Length = 198 Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust. Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 24/138 (17%) Query: 15 DVEIIARETLYRGFFSLDLYRFRHRLFNGQMSHEVRREIFERGH-----AAVLLPFDPVR 69 +VE +AR L+ S+DL + S+ VRR ++ER A +++P V Sbjct: 14 NVETVARSRLFT-VESVDL----------EFSNGVRR-VYERMRPTNREAVMIVPI--VD 59 Query: 70 DEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLIVKRTKPVLS 129 D ++LI + Y + L G+I+ GESV + A RE EE G + Sbjct: 60 DHLILIRE-----YAVGTESYELGFSKGLIDPGESVYEAANRELKEEVGFGANDLTFLKK 114 Query: 130 FLASPGGTSERSSIMVGE 147 +P S + +I+V + Sbjct: 115 LSMAPSYFSSKMNIVVAQ 132 >1VK6-A nrPDB Length = 269 Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust. Identities = 15/36 (41%), Positives = 24/36 (66%) Query: 94 MVAGMIEEGESVEDVARREAIEEAGLIVKRTKPVLS 129 ++AG +E GE++E RE +EE+G+ VK + V S Sbjct: 168 VLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTS 203 >5OTN-A nrPDB Length = 159 Score = 32.0 bits (71), Expect = 0.19, Method: Compositional matrix adjust. Identities = 13/26 (50%), Positives = 19/26 (73%) Query: 96 AGMIEEGESVEDVARREAIEEAGLIV 121 G ++ GE++E ARRE +EE+GL V Sbjct: 39 GGKVQTGETIEQAARRELLEESGLTV 64 >6DBY-A nrPDB Length = 150 Score = 31.6 bits (70), Expect = 0.25, Method: Compositional matrix adjust. Identities = 14/32 (43%), Positives = 21/32 (65%) Query: 94 MVAGMIEEGESVEDVARREAIEEAGLIVKRTK 125 + G +E GES E+ A RE +EE GL +++ K Sbjct: 41 LPGGHLEFGESFEECAAREVMEETGLKIEKMK 72 >5LPG-A nrPDB Length = 164 Score = 31.2 bits (69), Expect = 0.34, Method: Compositional matrix adjust. Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 2/65 (3%) Query: 92 LEMVAGMIEEGESVEDVARREAIEEAGLIVKRTK--PVLSFLASPGGTSERSSIMVGEVD 149 ++ G +E GE+ E+ A+RE EEA L +K V++ + +M GEVD Sbjct: 43 FQLPGGHLEFGETWEECAQRETWEEAALHLKNVHFASVVNSFIEKENYHYVTILMKGEVD 102 Query: 150 ATTAS 154 T S Sbjct: 103 VTHDS 107 >2D6F-C nrPDB Length = 619 Score = 30.8 bits (68), Expect = 0.42, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 6/61 (9%) Query: 51 REIFERGHAAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVAR 110 RE+ GH L D +RD + L+E +I+ L ++VA M +EG + ED AR Sbjct: 499 RELRREGHDVDGLGLDELRDAIKLLEVGKIS------KDALRDIVACMADEGLAAEDAAR 552 Query: 111 R 111 + Sbjct: 553 K 553 >2Z67-A nrPDB Length = 456 Score = 30.0 bits (66), Expect = 0.78, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 27/53 (50%) Query: 105 VEDVARREAIEEAGLIVKRTKPVLSFLASPGGTSERSSIMVGEVDATTASGIH 157 +EDV I E G+ ++ K L FL+ + S+ +GE +A T S IH Sbjct: 49 IEDVFNHRKIPENGIDDEKIKLFLKFLSMMDTDKDPKSVRIGEREARTYSKIH 101 >2DSC-A nrPDB Length = 212 Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 5/47 (10%) Query: 72 VVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAG 118 +VL++Q R + +E AG+I++GE+ E A RE EE G Sbjct: 79 IVLVKQFRPPMGG-----YCIEFPAGLIDDGETPEAAALRELEEETG 120 >5I8U-G nrPDB Length = 207 Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 11/130 (8%) Query: 11 FGKNDVEIIARETLYRGFFSLDLYRFRHRLFNGQMSHEVRREIFERGHAAVLLPFDPVRD 70 ++D E I+ ETL+ G L R + R+ G + V RE+ E A ++ D Sbjct: 1 MAEHDFETISSETLHTGAI-FALRRDQVRMPGGGI---VTREVVEHFGAVAIVAMDD-NG 55 Query: 71 EVVLIEQIRIAAYDTSETPWLLEMVAGMIE-EGESVEDVARREAIEEAGLIVKRTKPVLS 129 + ++ Q Y + L E+ AG+++ GE A RE EE GL + ++ Sbjct: 56 NIPMVYQ-----YRHTYGRRLWELPAGLLDVAGEPPHLTAARELREEVGLQASTWQVLVD 110 Query: 130 FLASPGGTSE 139 +PG + E Sbjct: 111 LDTAPGFSDE 120 >2OTN-A nrPDB Length = 308 Score = 28.1 bits (61), Expect = 3.1, Method: Compositional matrix adjust. Identities = 13/50 (26%), Positives = 23/50 (46%) Query: 136 GTSERSSIMVGEVDATTASGIHGLADENEDIRVHVVSREQAYQWVEEGKI 185 G+ + G A AS ++G + ++I VH+ + W EEG + Sbjct: 239 GSGVTQACGTGACAAVVASILNGKMERGKEITVHLAGGDLMIAWTEEGNV 288 >1X9N-A nrPDB Length = 688 Score = 27.7 bits (60), Expect = 4.1, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 2/53 (3%) Query: 74 LIEQIRIAAYD--TSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLIVKRT 124 L EQ +AA S TP E M++ G+ AR+ +EE G+I+K+T Sbjct: 223 LAEQSVLAALSQAVSLTPPGQEFPPAMVDAGKGKTAEARKTWLEEQGMILKQT 275 >3RC8-A nrPDB Length = 677 Score = 27.3 bits (59), Expect = 5.4, Method: Compositional matrix adjust. Identities = 12/33 (36%), Positives = 19/33 (57%) Query: 2 LKPDNLPVTFGKNDVEIIARETLYRGFFSLDLY 34 L+P + V F KND+ ++R+ RG S +Y Sbjct: 319 LRPGDCIVCFSKNDIYSVSRQIEIRGLESAVIY 351 >4MEV-A nrPDB Length = 345 Score = 26.9 bits (58), Expect = 5.5, Method: Compositional matrix adjust. Identities = 38/166 (22%), Positives = 67/166 (40%), Gaps = 36/166 (21%) Query: 50 RREIFER--GHAAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVED 107 RR++ + G AA +PF +A TS + G I+EG+ + Sbjct: 3 RRQLLQSMGGLAASTMPFS-------------LAFAQTSALKISHQFPGGTIKEGDFRDR 49 Query: 108 VARREAIEEAGLIVKRTKPVLSFLASPGGT-----SERSSIMVGEVDATTASGIHGLADE 162 + R A E + KR+K + F PG + ++ SS+ G +D + E Sbjct: 50 LVRNFAAE----VEKRSKGAMKFEIYPGSSLMKTNAQFSSMRKGALDMALIP-LSYAGGE 104 Query: 163 NEDIRVH-----VVSREQAYQW------VEEGKIDNAASVIALQWL 197 ++ + VVS EQAY W +E ++ ++ + W+ Sbjct: 105 VPELNIGLMPGLVVSYEQAYSWKTKPVGIELTRVLQEKGIVLISWI 150 >2B0V-A nrPDB Length = 153 Score = 26.9 bits (58), Expect = 6.7, Method: Compositional matrix adjust. Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 6/49 (12%) Query: 70 DEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAG 118 D+ +L+E+I T L AG +E GES+ RE +EE G Sbjct: 19 DKYLLVEEI------PRGTAIKLNQPAGHLEPGESIIQACSREVLEETG 61 >4U3W-A nrPDB Length = 505 Score = 26.6 bits (57), Expect = 8.2, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 10/59 (16%) Query: 49 VRREIFERGHAAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEM-----VAGMIEEG 102 VR EIF G + PFD DE +++++ +AY + + W ++ VA IE G Sbjct: 405 VREEIF--GPVCHIAPFD---DEAEVVKRVNDSAYGLAASIWTTQLARGHRVAKQIETG 458 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 1GA7-A nrPDB 329 6e-91 1VIU-A nrPDB 191 2e-49 5C8L-A nrPDB 184 2e-47 6EHH-A nrPDB 86 1e-17 Sequences not found previously or not previously below threshold: 5I8U-G nrPDB 77 6e-15 5MZF-A nrPDB 70 6e-13 6GLL-A nrPDB 68 2e-12 5ANS-A nrPDB 68 3e-12 5WS7-A nrPDB 67 4e-12 5OTN-A nrPDB 63 9e-11 3Q91-A nrPDB 62 2e-10 2DSC-A nrPDB 61 5e-10 1VHG-A nrPDB 54 4e-08 1SZ3-A nrPDB 49 1e-06 1VK6-A nrPDB 41 5e-04 6DBY-A nrPDB 40 8e-04 5LPG-A nrPDB 37 0.006 2RRK-A nrPDB 36 0.015 5J3Y-B nrPDB 35 0.020 2A6T-A nrPDB 35 0.020 3HHJ-A nrPDB 35 0.026 3EEU-A nrPDB 35 0.033 5T3P-A nrPDB 34 0.038 5QHA-A nrPDB 34 0.038 4V14-A nrPDB 34 0.047 5YGU-B nrPDB 33 0.10 3SHD-A nrPDB 33 0.11 5LF8-A nrPDB 32 0.13 2QJT-B nrPDB 32 0.14 5U7F-A nrPDB 32 0.17 4ZBP-A nrPDB 32 0.21 3A6V-A nrPDB 32 0.22 2X7W-A nrPDB 32 0.25 1VC9-A nrPDB 31 0.30 5CFI-A nrPDB 31 0.35 2B0V-A nrPDB 30 0.52 3I7U-A nrPDB 30 0.79 2AAZ-A nrPDB 30 0.83 2QJO-A nrPDB 29 2.1 2OCD-A nrPDB 28 2.4 3L4Y-A nrPDB 27 4.2 4H6Q-A nrPDB 27 5.8 1QVJ-A nrPDB 27 5.9 1X9N-A nrPDB 27 7.2 6D3J-A nrPDB 26 9.3 >1GA7-A nrPDB Length = 209 Score = 329 bits (843), Expect = 6e-91, Method: Composition-based stats. Identities = 209/209 (100%), Positives = 209/209 (100%) Query: 1 MLKPDNLPVTFGKNDVEIIARETLYRGFFSLDLYRFRHRLFNGQMSHEVRREIFERGHAA 60 MLKPDNLPVTFGKNDVEIIARETLYRGFFSLDLYRFRHRLFNGQMSHEVRREIFERGHAA Sbjct: 1 MLKPDNLPVTFGKNDVEIIARETLYRGFFSLDLYRFRHRLFNGQMSHEVRREIFERGHAA 60 Query: 61 VLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLI 120 VLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLI Sbjct: 61 VLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLI 120 Query: 121 VKRTKPVLSFLASPGGTSERSSIMVGEVDATTASGIHGLADENEDIRVHVVSREQAYQWV 180 VKRTKPVLSFLASPGGTSERSSIMVGEVDATTASGIHGLADENEDIRVHVVSREQAYQWV Sbjct: 121 VKRTKPVLSFLASPGGTSERSSIMVGEVDATTASGIHGLADENEDIRVHVVSREQAYQWV 180 Query: 181 EEGKIDNAASVIALQWLQLHHQALKNEWA 209 EEGKIDNAASVIALQWLQLHHQALKNEWA Sbjct: 181 EEGKIDNAASVIALQWLQLHHQALKNEWA 209 >1VIU-A nrPDB Length = 203 Score = 191 bits (486), Expect = 2e-49, Method: Composition-based stats. Identities = 51/154 (33%), Positives = 86/154 (55%), Gaps = 5/154 (3%) Query: 50 RREIFERGHAAVLLPFDPVRDEVVLIEQIRIAAY-DTSETPWLLEMVAGMIEEGESVEDV 108 +RE+++RG+ A +L ++ + VVLI Q R+A + + +E+ L+E AG+++ E E Sbjct: 40 KREVYDRGNGATILLYNTKKKTVVLIRQFRVATWVNGNESGQLIESCAGLLDNDEP-EVC 98 Query: 109 ARREAIEEAGLIVKRTKPVLSFLASPGGTSERSSIMVGEV-DATTASGIHGLADENEDIR 167 R+EAIEE G V + + SPGG +E + E D A+ G+ E+EDI Sbjct: 99 IRKEAIEETGYEVGEVRKLFELYMSPGGVTELIHFFIAEYSDNQRANAGGGV--EDEDIE 156 Query: 168 VHVVSREQAYQWVEEGKIDNAASVIALQWLQLHH 201 V + QA + ++ G+I + +V+ L +LQ H Sbjct: 157 VLELPFSQALEMIKTGEIRDGKTVLLLNYLQTSH 190 >5C8L-A nrPDB Length = 182 Score = 184 bits (467), Expect = 2e-47, Method: Composition-based stats. Identities = 43/158 (27%), Positives = 65/158 (41%), Gaps = 13/158 (8%) Query: 51 REIFERGHAAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVAR 110 RE AA+++P P VV+I Q R A LE AG + E A+ Sbjct: 37 REYILHPGAAMMIPLLP-NGNVVMIHQYRHAVKKV-----FLEFPAGKRDHNEETLLTAK 90 Query: 111 REAIEEAGLIVKRTKPVLSFLASPGGTSERSSIMVGEVDATTASGIHGLADENEDIRVHV 170 RE +EE G K K + + G ++E + + A + + D+ + I V Sbjct: 91 RELLEETGYEAKDWKFLTTIHPVIGYSNEHIDLYL----ARDLTHLEQRLDQGQFIEVVE 146 Query: 171 VSREQAYQWVEEGKIDNAASVIALQWLQLHHQALKNEW 208 V Q V EGK+ + + I WL + L+ EW Sbjct: 147 VKPADLMQLVLEGKVSDVKTQIGAFWLD---KFLRGEW 181 >6EHH-A nrPDB Length = 176 Score = 85.9 bits (211), Expect = 1e-17, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 13/84 (15%) Query: 96 AGMIEEGESVEDVARREAIEEAGLIVKRTKPV----LSFLASPGGTSERSSIMVGEVDAT 151 G ++EGE++ED A+RE +EE+GL V V F+ SP + +V Sbjct: 56 GGKVQEGETIEDGAKRELLEESGLSVDTLHKVGHISFEFVGSPE---------LMDVHIF 106 Query: 152 TASGIHGLADENEDIRVHVVSREQ 175 +A +HG E+E++R +Q Sbjct: 107 SADHVHGTPTESEEMRPQWFQLDQ 130 >5I8U-G nrPDB Length = 207 Score = 77.1 bits (188), Expect = 6e-15, Method: Composition-based stats. Identities = 45/188 (23%), Positives = 79/188 (42%), Gaps = 21/188 (11%) Query: 12 GKNDVEIIARETLYRGFFSLDLYRFRHRLFNGQMSHEVRREIFERGHAAVLLPFDPVRDE 71 ++D E I+ ETL+ G L R + R+ G + V RE+ E A ++ D Sbjct: 2 AEHDFETISSETLHTGAI-FALRRDQVRMPGGGI---VTREVVEHFGAVAIVAMD-DNGN 56 Query: 72 VVLIEQIRIAAYDTSETPWLLEMVAGMIE-EGESVEDVARREAIEEAGLIVKRTKPVLSF 130 + ++ Q R + L E+ AG+++ GE A RE EE GL + ++ Sbjct: 57 IPMVYQYRH-----TYGRRLWELPAGLLDVAGEPPHLTAARELREEVGLQASTWQVLVDL 111 Query: 131 LASPGGTSERSSIMVG----EVDATTASGIHGLADENEDIRVHVVSREQAYQWVEEGKID 186 +PG + E + + EV A E D+ + +A + V G+I Sbjct: 112 DTAPGFSDESVRVYLATGLREVGRPEAHH------EQADMTMGWYPIAEAARRVLRGEIV 165 Query: 187 NAASVIAL 194 N+ ++ + Sbjct: 166 NSIAIAGV 173 >5MZF-A nrPDB Length = 176 Score = 70.1 bits (170), Expect = 6e-13, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 13/84 (15%) Query: 96 AGMIEEGESVEDVARREAIEEAGLIVKRTKPV----LSFLASPGGTSERSSIMVGEVDAT 151 G ++EGE++ED A+RE EE+GL V V F+ P + +V Sbjct: 56 GGKVQEGETIEDGAKRELREESGLTVDTLHKVGQIMFEFVGEPE---------LMDVHIF 106 Query: 152 TASGIHGLADENEDIRVHVVSREQ 175 + G E++++R +Q Sbjct: 107 CTDSVQGTPVESDEMRPQWFQLDQ 130 >6GLL-A nrPDB Length = 182 Score = 68.2 bits (165), Expect = 2e-12, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 13/84 (15%) Query: 96 AGMIEEGESVEDVARREAIEEAGLIVKRTKP----VLSFLASPGGTSERSSIMVGEVDAT 151 G ++EGE++ED ARRE EE+GL V V F+ P + +V Sbjct: 62 GGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVGEPE---------LMDVHVF 112 Query: 152 TASGIHGLADENEDIRVHVVSREQ 175 I G E++++R +Q Sbjct: 113 CTDSIQGTPVESDEMRPCWFQLDQ 136 >5ANS-A nrPDB Length = 175 Score = 68.2 bits (165), Expect = 3e-12, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 13/84 (15%) Query: 96 AGMIEEGESVEDVARREAIEEAGLIVKRTKP----VLSFLASPGGTSERSSIMVGEVDAT 151 G ++EGE++ED ARRE EE+GL V V F+ P + +V Sbjct: 55 GGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVGEPE---------LMDVHVF 105 Query: 152 TASGIHGLADENEDIRVHVVSREQ 175 I G E++++R +Q Sbjct: 106 CTDSIQGTPVESDEMRPCWFQLDQ 129 >5WS7-A nrPDB Length = 156 Score = 67.4 bits (163), Expect = 4e-12, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 13/84 (15%) Query: 96 AGMIEEGESVEDVARREAIEEAGLIVKRTKP----VLSFLASPGGTSERSSIMVGEVDAT 151 G ++EGE++ED ARRE EE+GL V V F+ P + +V Sbjct: 36 GGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVGEPE---------LMDVHVF 86 Query: 152 TASGIHGLADENEDIRVHVVSREQ 175 I G E++++R +Q Sbjct: 87 ATDSIQGTPVESDEMRPSWFQLDQ 110 >5OTN-A nrPDB Length = 159 Score = 62.8 bits (151), Expect = 9e-11, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 5/80 (6%) Query: 96 AGMIEEGESVEDVARREAIEEAGLIVKRTKPVLSFLASPGGTSERSSIMVGEVDATTASG 155 G ++ GE++E ARRE +EE+GL V + + G +E +V A Sbjct: 39 GGKVQTGETIEQAARRELLEESGLTVDTLHKIGNIKFEFIGETELM-----DVHIFRADN 93 Query: 156 IHGLADENEDIRVHVVSREQ 175 G E++++R ++ Sbjct: 94 YEGEPAESDEMRPQWFDIDK 113 >3Q91-A nrPDB Length = 218 Score = 61.7 bits (148), Expect = 2e-10, Method: Composition-based stats. Identities = 42/170 (24%), Positives = 71/170 (41%), Gaps = 31/170 (18%) Query: 59 AAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWL--------------------------L 92 + +L F+ R +VL++Q R A Y + Sbjct: 38 SVTVLLFNSSRRSLVLVKQFRPAVYAGEVERRFPGSLAAVDQDGPRELQPALPGSAGVTV 97 Query: 93 EMVAGMIEE-GESVEDVARREAIEEAGLIV--KRTKPVLSFLASPGGTSERSSIMVGEV- 148 E+ AG++++ G S+E+VA +EA EE G + + V ++ + G T R ++ EV Sbjct: 98 ELCAGLVDQPGLSLEEVACKEAWEECGYHLAPSDLRRVATYWSGVGLTGSRQTMFYTEVT 157 Query: 149 DATTASGIHGLADENEDIRVHVVSREQAYQWVEEGKIDNAASVI-ALQWL 197 DA + GL +E E I V + E A + ++ I VI + W Sbjct: 158 DAQRSGPGGGLVEEGELIEVVHLPLEGAQAFADDPDIPKTLGVIFGVSWF 207 >2DSC-A nrPDB Length = 212 Score = 60.5 bits (145), Expect = 5e-10, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 44/109 (40%), Gaps = 7/109 (6%) Query: 72 VVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLIVKRTKPVLSFL 131 +VL++Q R + +E AG+I++GE+ E A RE EE G + + Sbjct: 79 IVLVKQFRPPM-----GGYCIEFPAGLIDDGETPEAAALRELEEETGYKGDIAECSPAVC 133 Query: 132 ASPGGTSERSSIMVGEVDATTASGIHGLAD--ENEDIRVHVVSREQAYQ 178 PG ++ I+ ++ A + E + V + + Q Sbjct: 134 MDPGLSNCTIHIVTVTINGDDAENARPKPKPGDGEFVEVISLPKNDLLQ 182 >1VHG-A nrPDB Length = 198 Score = 54.0 bits (128), Expect = 4e-08, Method: Composition-based stats. Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 33/199 (16%) Query: 15 DVEIIARETLYRGFFSLDLYRFRHRLFNGQMSHEVRREIFER-----GHAAVLLPFDPVR 69 +VE +AR L+ S+DL + S+ VRR ++ER A +++P V Sbjct: 14 NVETVARSRLFT-VESVDL----------EFSNGVRR-VYERMRPTNREAVMIVPI--VD 59 Query: 70 DEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLIVKRTKPVLS 129 D ++LI + + L G+I+ GESV + A RE EE G + Sbjct: 60 DHLILIREYAVGTESYE-----LGFSKGLIDPGESVYEAANRELKEEVGFGANDLTFLKK 114 Query: 130 FLASPGGTSERSSIMVG-EVDATTASGIHGLADENEDIRVHVVSREQAYQWVEEGKIDNA 188 +P S + +I+V ++ + G DE E + +E+ + A Sbjct: 115 LSMAPSYFSSKMNIVVAQDLYPESLEG-----DEPEPLPQVRWPLAHMMDLLEDPDFNEA 169 Query: 189 ASVIALQWLQLHHQALKNE 207 +V AL L + LK + Sbjct: 170 RNVSALF---LVREWLKGQ 185 >1SZ3-A nrPDB Length = 159 Score = 49.3 bits (116), Expect = 1e-06, Method: Composition-based stats. Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 7/149 (4%) Query: 45 MSHEVRREIFERGHAAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGES 104 M H+ R + AA ++ + R +++L+++ I + E L + +G +E+GE+ Sbjct: 1 MEHDERTHVPVELRAAGVVLLN-ERGDILLVQEKGIPGH--PEKAGLWHIPSGAVEDGEN 57 Query: 105 VEDVARREAIEEAGLIVKRTKPVLSFLAS-PGGTSERSSIMVGEVDATTASGIHGLADEN 163 +D A REA EE GL V+ K + ++L P G + + E + A + Sbjct: 58 PQDAAVREACEETGLRVRPVKFLGAYLGRFPDGVLILRHVWLAEPEPGQTLA---PAFTD 114 Query: 164 EDIRVHVVSREQAYQWVEEGKIDNAASVI 192 E VSRE Q G+I + + Sbjct: 115 EIAEASFVSREDFAQLYAAGQIRMYQTKL 143 >1VK6-A nrPDB Length = 269 Score = 40.9 bits (94), Expect = 5e-04, Method: Composition-based stats. Identities = 27/126 (21%), Positives = 50/126 (39%), Gaps = 14/126 (11%) Query: 51 REIFERGHAAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVAR 110 RE + A ++ D ++L + R + T ++AG +E GE++E Sbjct: 132 RERYYPQIAPCIIVAIRRDDSILLAQHTRH--RNGVHT-----VLAGFVEVGETLEQAVA 184 Query: 111 REAIEEAGLIVKRTKPVLSFLASPGGTSERSSIMVGEVDATTASGIHGLADENEDIRVHV 170 RE +EE+G+ VK + V S P + + E D+ + D E + + Sbjct: 185 REVMEESGIKVKNLRYVTS-QPWP-FPQSLMTAFMAEYDSGDI-----VIDPKELLEANW 237 Query: 171 VSREQA 176 + Sbjct: 238 YRYDDL 243 >6DBY-A nrPDB Length = 150 Score = 39.7 bits (91), Expect = 8e-04, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 9/83 (10%) Query: 46 SHEVRREIFERGHAAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESV 105 SH E R V + +L+ + R + +++ + G +E GES Sbjct: 2 SHMSTGEAIPRVAVVVFIL----NGNSILLGRRRSSIGNST-----FALPGGHLEFGESF 52 Query: 106 EDVARREAIEEAGLIVKRTKPVL 128 E+ A RE +EE GL +++ K + Sbjct: 53 EECAAREVMEETGLKIEKMKLLT 75 >5LPG-A nrPDB Length = 164 Score = 37.0 bits (84), Expect = 0.006, Method: Composition-based stats. Identities = 25/97 (25%), Positives = 40/97 (41%), Gaps = 5/97 (5%) Query: 83 YDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLIVKRTKPVLSFLASPGGTSER-- 140 S ++ G +E GE+ E+ A+RE EEA L +K + + Sbjct: 34 RKGSVGAGSFQLPGGHLEFGETWEECAQRETWEEAALHLKNVHFASVVNSFIEKENYHYV 93 Query: 141 SSIMVGEVDATTASGIHGL-ADENEDIRVHVVSREQA 176 + +M GEVD T S + ++NE V E+ Sbjct: 94 TILMKGEVDVTHDSEPKNVEPEKNESWE--WVPWEEL 128 >2RRK-A nrPDB Length = 140 Score = 35.9 bits (81), Expect = 0.015, Method: Composition-based stats. Identities = 23/94 (24%), Positives = 31/94 (32%), Gaps = 7/94 (7%) Query: 86 SETPWLLEMVAGMIEEGESVEDVARREAIEEAGLIVKRTKPVLSFLASPGGTSERSSIMV 145 S+ L E G +E ES RE EE G+ + V S G Sbjct: 31 SDQAGLWEFAGGKVEPDESQRQALVRELREELGIEATVGEYVASHQREVSGRIIHL---- 86 Query: 146 GEVDATTASGIHGLADENEDIRVHVVSREQAYQW 179 A HG +E + S E+A Q+ Sbjct: 87 ---HAWHVPDFHGTLQAHEHQALVWCSPEEALQY 117 >5J3Y-B nrPDB Length = 242 Score = 35.1 bits (79), Expect = 0.020, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 7/58 (12%) Query: 67 PVRDEVVLIEQIRIAA----YDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLI 120 PVR ++L ++ + S + W G I++ ES D A RE EE G Sbjct: 97 PVRGAIMLDMSMQQCVLVKGWKAS-SGW--GFPKGKIDKDESDVDCAIREVYEETGFD 151 >2A6T-A nrPDB Length = 271 Score = 35.1 bits (79), Expect = 0.020, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 7/58 (12%) Query: 67 PVRDEVVLIEQIRIAA----YDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLI 120 PVR ++L ++ + S + W G I++ ES D A RE EE G Sbjct: 102 PVRGAIMLDMSMQQCVLVKGWKAS-SGW--GFPKGKIDKDESDVDCAIREVYEETGFD 156 >3HHJ-A nrPDB Length = 158 Score = 34.7 bits (78), Expect = 0.026, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 23/58 (39%) Query: 84 DTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLIVKRTKPVLSFLASPGGTSERS 141 + L E G +E+GE+ E RE EE G+ V+ AS G + Sbjct: 50 EGKSLAGLWEFPGGKVEQGETPEASLIRELEEELGVHVQADNLFPLTFASHGYETFHL 107 >3EEU-A nrPDB Length = 153 Score = 34.7 bits (78), Expect = 0.033, Method: Composition-based stats. Identities = 12/30 (40%), Positives = 16/30 (53%) Query: 93 EMVAGMIEEGESVEDVARREAIEEAGLIVK 122 E G IE GE+ E+ RE EE G+ + Sbjct: 51 EFPGGKIENGETPEEALARELNEELGIEAE 80 >5T3P-A nrPDB Length = 236 Score = 34.3 bits (77), Expect = 0.038, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 9/116 (7%) Query: 35 RFRHRLFNGQMSHEVRREIFERGHAAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEM 94 R R G+ SH + +VLLP ++ L+ + + P + Sbjct: 23 RLRKYDIGGKYSHLPYNKY------SVLLPLVAKEGKLHLL--FTVRSEKLRRAPGEVCF 74 Query: 95 VAGMIE-EGESVEDVARREAIEEAGLIVKRTKPVLSFLASPGGTSERSSIMVGEVD 149 G + A REA EE GL + + V + T + VG +D Sbjct: 75 PGGKRDPTDMDDAATALREAQEEVGLRPHQVEVVCCLVPCLIDTDTLITPFVGLID 130 >5QHA-A nrPDB Length = 196 Score = 34.3 bits (77), Expect = 0.038, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 9/116 (7%) Query: 35 RFRHRLFNGQMSHEVRREIFERGHAAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEM 94 R R G+ SH + +VLLP ++ L+ + + P + Sbjct: 9 RLRKYDIGGKYSHLPYNKY------SVLLPLVAKEGKLHLL--FTVRSEKLRRAPGEVCF 60 Query: 95 VAGMIE-EGESVEDVARREAIEEAGLIVKRTKPVLSFLASPGGTSERSSIMVGEVD 149 G + A REA EE GL + + V + T + VG +D Sbjct: 61 PGGKRDPTDMDDAATALREAQEEVGLRPHQVEVVCCLVPCLIDTDTLITPFVGLID 116 >4V14-A nrPDB Length = 138 Score = 33.9 bits (76), Expect = 0.047, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 25/88 (28%), Gaps = 7/88 (7%) Query: 89 PWLLEMVAGMIEEGESVEDVARREAIEEAGLIVKRTKPVLSFLASPGGTSERSSIMVGEV 148 E G +E GES E RE EE G+ V + F S M+ Sbjct: 37 GGFWEFPGGKVEAGESREQAMVRELEEEIGITVTEQQAFQHFDFDYTDKSLSFDFML--- 93 Query: 149 DATTASGIHGLADENEDIRVHVVSREQA 176 + G E + V Sbjct: 94 ----VTAFDGQPHGREGQQGGWVKIADL 117 >5YGU-B nrPDB Length = 168 Score = 32.8 bits (73), Expect = 0.10, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 29/74 (39%), Gaps = 11/74 (14%) Query: 56 RGHAAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIE 115 R + +++ + +V+ + ++ + G I GES E RE E Sbjct: 8 RPNVGIVI--SNRQGQVMWARRFGQHSW---------QFPQGGINPGESAEQAMYRELFE 56 Query: 116 EAGLIVKRTKPVLS 129 E GL K + + S Sbjct: 57 EVGLSRKDVRILAS 70 >3SHD-A nrPDB Length = 153 Score = 32.8 bits (73), Expect = 0.11, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 17/33 (51%) Query: 95 VAGMIEEGESVEDVARREAIEEAGLIVKRTKPV 127 AG +E E++ + A RE EE G+ + + Sbjct: 34 PAGHLEADETLVEAAARELWEETGISAQPQHFI 66 >5LF8-A nrPDB Length = 328 Score = 32.4 bits (72), Expect = 0.13, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 4/60 (6%) Query: 60 AVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGL 119 V + V+L + R S +P L G +E E + D RE EE+GL Sbjct: 94 GVAVILQSSDKTVLLTRRAR----TLSVSPNLWVPPGGHVELEEELLDGGLRELWEESGL 149 >2QJT-B nrPDB Length = 352 Score = 32.4 bits (72), Expect = 0.14, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 37/102 (36%), Gaps = 16/102 (15%) Query: 56 RGHAAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIE 115 + + + V D ++++++ D L + G +E E++ RE E Sbjct: 205 KPNFVTVDALVIVNDHILMVQRKAHPGKD------LWALPGGFLECDETIAQAIIRELFE 258 Query: 116 EAGL--------IVKRTKPVLSF--LASPGGTSERSSIMVGE 147 E + I KR + V + + G T + V + Sbjct: 259 ETNINLTHEQLAIAKRCEKVFDYPDRSVRGRTISHVGLFVFD 300 >5U7F-A nrPDB Length = 150 Score = 32.0 bits (71), Expect = 0.17, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 36/73 (49%), Gaps = 8/73 (10%) Query: 49 VRREIFERGHAAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDV 108 ++ ++++R + +++ + V+++++ + P + V G +EEGE+ Sbjct: 1 MKDKVYKRPVSILVVIYAQDTKRVLMLQR--------RDDPDFWQSVTGSVEEGETAPQA 52 Query: 109 ARREAIEEAGLIV 121 A RE EE + V Sbjct: 53 AMREVKEEVTIDV 65 >4ZBP-A nrPDB Length = 310 Score = 32.0 bits (71), Expect = 0.21, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 6/66 (9%) Query: 57 GHAAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEE 116 G A+++ + VL+ Q R + L G+I EGE + RE EE Sbjct: 133 GAGALVINKNTKE---VLVVQERSGFFKDKNVWKL---PTGVINEGEDIWTGVAREVEEE 186 Query: 117 AGLIVK 122 G+I Sbjct: 187 TGIIAD 192 >3A6V-A nrPDB Length = 129 Score = 31.6 bits (70), Expect = 0.22, Method: Composition-based stats. Identities = 13/28 (46%), Positives = 15/28 (53%) Query: 92 LEMVAGMIEEGESVEDVARREAIEEAGL 119 LE G IE GE+ E RE EE G+ Sbjct: 33 LEFPGGKIEMGETPEQAVVRELQEEVGI 60 >2X7W-A nrPDB Length = 287 Score = 31.6 bits (70), Expect = 0.25, Method: Composition-based stats. Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 2/40 (5%) Query: 83 YDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLIVK 122 + E PW+LE G E E ++ V E IE+ G+ V Sbjct: 250 KEIQEVPWILETPGGNEEHAEDIKKVF--EIIEKFGIEVD 287 >1VC9-A nrPDB Length = 126 Score = 31.2 bits (69), Expect = 0.30, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 31/89 (34%), Gaps = 10/89 (11%) Query: 94 MVAGMIEEGESVEDVARREAIEEAGLIVKRTKPVL-SFLASPGGTSERSSIMVGEVDATT 152 G E GES+E+ A RE E+ G+ + P+ + +P G + Sbjct: 28 FPKGHPEPGESLEEAAVREVWEQTGVRAEVLLPLYPTRYVNPKGVEREVHWFLMR----- 82 Query: 153 ASGIHGLADENEDIR-VHVVSREQAYQWV 180 G E + S E+A + Sbjct: 83 ---GEGAPRLEEGMTGAGWFSPEEARALL 108 >5CFI-A nrPDB Length = 152 Score = 31.2 bits (69), Expect = 0.35, Method: Composition-based stats. Identities = 11/33 (33%), Positives = 17/33 (51%) Query: 95 VAGMIEEGESVEDVARREAIEEAGLIVKRTKPV 127 G+ E ES + A RE +EE G+ + K + Sbjct: 47 PKGLHENNESGLETAVRETLEETGINKDKYKLL 79 >2B0V-A nrPDB Length = 153 Score = 30.5 bits (67), Expect = 0.52, Method: Composition-based stats. Identities = 12/29 (41%), Positives = 15/29 (51%) Query: 92 LEMVAGMIEEGESVEDVARREAIEEAGLI 120 L AG +E GES+ RE +EE G Sbjct: 35 LNQPAGHLEPGESIIQACSREVLEETGHS 63 >3I7U-A nrPDB Length = 134 Score = 30.1 bits (66), Expect = 0.79, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 16/38 (42%) Query: 94 MVAGMIEEGESVEDVARREAIEEAGLIVKRTKPVLSFL 131 G IE GE E+ A RE EE G+ + + Sbjct: 29 FPKGNIEPGEKPEETAVREVWEETGVKGEILDYIGEIH 66 >2AAZ-A nrPDB Length = 317 Score = 29.7 bits (65), Expect = 0.83, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 1/69 (1%) Query: 36 FRHRLFNGQMSHEVRREIFERGHAAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMV 95 FR L + + + +F RG A LL F + ++ + +D + + LE V Sbjct: 54 FRFSLADNTLPLLTTKRVFLRGVIAELLWFVSGCTDAKMLSSQGVGIWDGNGSKEFLEKV 113 Query: 96 A-GMIEEGE 103 G EG+ Sbjct: 114 GLGHRREGD 122 >2QJO-A nrPDB Length = 341 Score = 28.5 bits (62), Expect = 2.1, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 17/31 (54%) Query: 91 LLEMVAGMIEEGESVEDVARREAIEEAGLIV 121 L+ + G I++ E++ + RE EE L V Sbjct: 229 LIALPGGFIKQNETLVEGMLRELKEETRLKV 259 >2OCD-A nrPDB Length = 337 Score = 28.2 bits (61), Expect = 2.4, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 34/92 (36%), Gaps = 7/92 (7%) Query: 45 MSHEVRREIFERGHAAVLLPFD-----PVRDEVVLIEQIRIAAYDTSETPWLLEMVAGMI 99 +SHEV R + A++L P E L+ Q++ A+ L + +AG + Sbjct: 222 ISHEVIRNTLLQPVNAMILLTFGVGNAPQNPE--LLAQLKAASERGVIVVNLTQCLAGKV 279 Query: 100 EEGESVEDVARREAIEEAGLIVKRTKPVLSFL 131 G A +A +G + + Sbjct: 280 NMGGYATGCALADAGVISGYDMTPEAALAKLH 311 >3L4Y-A nrPDB Length = 875 Score = 27.4 bits (59), Expect = 4.2, Method: Composition-based stats. Identities = 24/100 (24%), Positives = 46/100 (46%), Gaps = 6/100 (6%) Query: 6 NLPVTFGKNDVEIIARETLYRGFFSLDLYRFRHRLFNGQMSHEVRREIFERGHAAVLLPF 65 N P + +E+I R L +++L + R+ G + + RE+ ER AA LP+ Sbjct: 268 NTPEQVVQEYLELIGRPAL-PSYWALGFHLSRYEY--GTLDN--MREVVERNRAAQ-LPY 321 Query: 66 DPVRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESV 105 D ++ +++ R YD+ + E V + G+ + Sbjct: 322 DVQHADIDYMDERRDFTYDSVDFKGFPEFVNELHNNGQKL 361 >4H6Q-A nrPDB Length = 312 Score = 27.0 bits (58), Expect = 5.8, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 10/92 (10%) Query: 74 LIEQ-IRIAAYDTSETPWLLEMVAGMIEE-------GESVEDVARR-EAIEEAGLIVKRT 124 +I+Q R A +E P + ++ + GES+E + +A+E G I Sbjct: 3 MIDQLYRKAVLTVAERPQVEQLARQKMWNLAERFVAGESIESAIQAVQALERDG-IAGNL 61 Query: 125 KPVLSFLASPGGTSERSSIMVGEVDATTASGI 156 + F+ SP +E + ++ ++A A+GI Sbjct: 62 DLLGEFIDSPAKCTEFADDVIKLIEAAHAAGI 93 >1QVJ-A nrPDB Length = 292 Score = 27.0 bits (58), Expect = 5.9, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 3/43 (6%) Query: 75 IEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEEA 117 I Q +A W + GM++ GE + +RE EEA Sbjct: 138 ILQF-VAIKRKDCGEWAI--PGGMVDPGEKISATLKREFGEEA 177 >1X9N-A nrPDB Length = 688 Score = 26.6 bits (57), Expect = 7.2, Method: Composition-based stats. Identities = 14/40 (35%), Positives = 22/40 (55%) Query: 85 TSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLIVKRT 124 S TP E M++ G+ AR+ +EE G+I+K+T Sbjct: 236 VSLTPPGQEFPPAMVDAGKGKTAEARKTWLEEQGMILKQT 275 >6D3J-A nrPDB Length = 295 Score = 26.2 bits (56), Expect = 9.3, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 19/48 (39%) Query: 101 EGESVEDVARREAIEEAGLIVKRTKPVLSFLASPGGTSERSSIMVGEV 148 EG + RREA E + I +FL +P +I V E Sbjct: 87 EGYPEVQMIRREANESSRFIGDDWHTDSTFLDAPPAAVVMRAIEVPEY 134 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.315 0.130 0.334 Lambda K H 0.267 0.0399 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 7,672,936 Number of Sequences: 36641 Number of extensions: 275220 Number of successful extensions: 916 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 60 Number of HSP's successfully gapped in prelim test: 21 Number of HSP's that attempted gapping in prelim test: 836 Number of HSP's gapped (non-prelim): 83 length of query: 209 length of database: 10,336,785 effective HSP length: 93 effective length of query: 116 effective length of database: 6,929,172 effective search space: 803783952 effective search space used: 803783952 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 57 (26.6 bits)