BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q92979 (244 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5FAI-A nrPDB 475 e-135 2V3J-A nrPDB 234 2e-62 5OQL-e nrPDB 211 2e-55 3BBD-A nrPDB 81 4e-16 3O7B-A nrPDB 64 6e-11 4MPS-A nrPDB 28 2.4 4V03-A nrPDB 28 2.6 4JS2-A nrPDB 28 5.1 3HPA-A nrPDB 27 6.8 >5FAI-A nrPDB Length = 232 Score = 475 bits (1222), Expect = e-135, Method: Compositional matrix adjust. Identities = 231/231 (100%), Positives = 231/231 (100%) Query: 14 SGGEQAQDWDALPPKRPRLGAGNKIGGRRLIVVLEGASLETVKVGKTYELLNCDKHKSIL 73 SGGEQAQDWDALPPKRPRLGAGNKIGGRRLIVVLEGASLETVKVGKTYELLNCDKHKSIL Sbjct: 2 SGGEQAQDWDALPPKRPRLGAGNKIGGRRLIVVLEGASLETVKVGKTYELLNCDKHKSIL 61 Query: 74 LKNGRDPGEARPDITHQSLLMLMDSPLNRAGLLQVYIHTQKNVLIEVNPQTRIPRTFDRF 133 LKNGRDPGEARPDITHQSLLMLMDSPLNRAGLLQVYIHTQKNVLIEVNPQTRIPRTFDRF Sbjct: 62 LKNGRDPGEARPDITHQSLLMLMDSPLNRAGLLQVYIHTQKNVLIEVNPQTRIPRTFDRF 121 Query: 134 CGLMVQLLHKLSVRAADGPQKLLKVIKNPVSDHFPVGCMKVGTSFSIPVVSDVRELVPSS 193 CGLMVQLLHKLSVRAADGPQKLLKVIKNPVSDHFPVGCMKVGTSFSIPVVSDVRELVPSS Sbjct: 122 CGLMVQLLHKLSVRAADGPQKLLKVIKNPVSDHFPVGCMKVGTSFSIPVVSDVRELVPSS 181 Query: 194 DPIVFVVGAFAHGKVSVEYTEKMVSISNYPLSAALTCAKLTTAFEEVWGVI 244 DPIVFVVGAFAHGKVSVEYTEKMVSISNYPLSAALTCAKLTTAFEEVWGVI Sbjct: 182 DPIVFVVGAFAHGKVSVEYTEKMVSISNYPLSAALTCAKLTTAFEEVWGVI 232 >2V3J-A nrPDB Length = 258 Score = 234 bits (597), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 124/242 (51%), Positives = 158/242 (65%), Gaps = 11/242 (4%) Query: 13 RSGGEQAQDWDALPPKRPRLGAGNKIGGRRLIVVLEGASLETVKV------GKTYELLNC 66 + G ++A +P P L + +KI +R+IVVL ASLET K+ G Y LLNC Sbjct: 12 KGGDQKALPASLVPQAPPVLTSKDKIT-KRMIVVLAMASLETHKISSNGPGGDKYVLLNC 70 Query: 67 DKHKSILLKNGRDPGEARPDITHQSLLMLMDSPLNRAGLLQVYIHTQKNVLIEVNPQTRI 126 D H+ +L K GRD EARPDITHQ LL L+DSP+N+AG LQVYI T + +LIEVNP RI Sbjct: 71 DDHQGLLKKMGRDISEARPDITHQCLLTLLDSPINKAGKLQVYIQTSRGILIEVNPTVRI 130 Query: 127 PRTFDRFCGLMVQLLHKLSVRAADGPQKLLKVIKNPVSDHFPVGCMKVGTSFSIPV--VS 184 PRTF RF GLMVQLLHKLS+R+ + +KLLKVIKNP++DH P C KV SF PV V Sbjct: 131 PRTFKRFSGLMVQLLHKLSIRSVNSEEKLLKVIKNPITDHLPTKCRKVTLSFDAPVIRVQ 190 Query: 185 DVRELVPSSDPIVFVVGAFAHGK--VSVEYTEKMVSISNYPLSAALTCAKLTTAFEEVWG 242 D E + + I VGA A GK + EY ++ V +SNYPLSA++ C+K E+ W Sbjct: 191 DYIEKLDDDESICVFVGAMARGKDNFADEYVDEKVGLSNYPLSASVACSKFCHGAEDAWN 250 Query: 243 VI 244 ++ Sbjct: 251 IL 252 >5OQL-e nrPDB Length = 252 Score = 211 bits (538), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 118/241 (48%), Positives = 149/241 (61%), Gaps = 23/241 (9%) Query: 26 PPKRPRLGAG-------NKIGGRRLIVVLEGASLETVKVG----------KTYELLNCDK 68 PP P+L A N +RLIVVL ASLET K + Y LLN D+ Sbjct: 13 PPALPQLVAEQHVPIPPNDKDTKRLIVVLSNASLETYKASHGTNRNGVREEKYTLLNSDE 72 Query: 69 HKSILLKNGRDPGEARPDITHQSLLMLMDSPLNRAGLLQVYIHTQKNVLIEVNPQTRIPR 128 H I+ K RD +ARPDITHQ LL L+DSP+N+AG LQ+YI T K VLIEV+P RIPR Sbjct: 73 HIGIMRKMNRDISDARPDITHQCLLTLLDSPINKAGKLQIYIQTAKGVLIEVSPTVRIPR 132 Query: 129 TFDRFCGLMVQLLHKLSVRAADGPQKLLKVIKNPVSDHFPVGCMKVGTSFSIPVVSDVRE 188 TF RF GLMVQLLH+LS++ + +KLLKVI+NP++DH P C KV SF P+V VR+ Sbjct: 133 TFKRFAGLMVQLLHRLSIKGTNTNEKLLKVIQNPITDHLPPNCRKVTLSFDAPLVR-VRD 191 Query: 189 LVPSSDP---IVFVVGAFAHG--KVSVEYTEKMVSISNYPLSAALTCAKLTTAFEEVWGV 243 V + P I VGA A G + Y ++ +SISNY LSA++ C+K A E+ W + Sbjct: 192 YVDTLGPNESICVFVGAMAKGPDNFADAYVDEKISISNYSLSASVACSKFCHACEDAWDI 251 Query: 244 I 244 I Sbjct: 252 I 252 >3BBD-A nrPDB Length = 205 Score = 80.9 bits (198), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 56/202 (27%), Positives = 99/202 (49%), Gaps = 24/202 (11%) Query: 45 VVLEGASLETV------KVGKT----YELLNCDKHKSILLKNGRDPGEARPDITHQSLLM 94 ++L ++LE + K+ K+ Y++L+ + H + K RPDI H SLL Sbjct: 5 IILAKSALELIPEEIKNKIRKSRVYKYDILDSNYHYKAMEKLKDKEMRGRPDIIHISLLN 64 Query: 95 LMDSPLNRAGLLQVYIHTQKNVLIEVNPQTRIPRTFDRFCGLMVQLLHKLSVRAADGPQK 154 ++DSP+N L +YIHT + ++++NP+TR+PR + RF G+M ++L +K Sbjct: 65 ILDSPINHEKKLNIYIHTYDDKVLKINPETRLPRNYFRFLGVMEKVLKGERNHLIKMEEK 124 Query: 155 LLKVIKNPVSDHFPVGCMKVGTSFSIPVVSDVRELVPSSDPIVFVVGAFAHGKVSVEYTE 214 L+ + N ++ + M + P +L+ D F++G F +GK+ + + Sbjct: 125 TLEDLLNEINAK-KIAIMTKTGKLTHP------KLLKEYD--TFIIGGFPYGKLKINKEK 175 Query: 215 -----KMVSISNYPLSAALTCA 231 K +SI N L A C Sbjct: 176 VFGDIKEISIYNKGLMAWTVCG 197 >3O7B-A nrPDB Length = 244 Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 20/197 (10%) Query: 53 ETVKVGKTYE--LLNCDKHKSILLKNGRDPGEARPDITHQSLLMLMDSPLNRAGLLQVYI 110 + ++ GK E LL+ KH + + RPDI HQ LL+L+DSPL +VY+ Sbjct: 53 DAIRRGKRPEKILLDDSKHHTAMKSLEFREKRGRPDIVHQCLLLLLDSPLRD---FEVYV 109 Query: 111 HTQKNVLIEVNPQTRIPRTFDRFCGLMVQLLHKLSVRAADGPQKLLKVI--KNPVSDHFP 168 HT +I VN +TR+PR ++RF GLM +L + + A D K + ++ V Sbjct: 110 HTLNGEIIWVNRETRLPRNYNRFVGLMEKLFEERRITAGDTTLIEFKDVGLRDIVRGRDV 169 Query: 169 VGCMKVGTSFSIPVVSDVRELVPSSDPIVFVVGAFAHGKVSVEYTEKM-----VSISNYP 223 + + G F + D + +GAF HG E ++ VS+ Sbjct: 170 LLFREKGGRFEFSELLD--------GDVAVCIGAFPHGDFFEETLRELGEFKEVSLGTES 221 Query: 224 LSAALTCAKLTTAFEEV 240 ++ +++ +E V Sbjct: 222 YTSLYVTSRVLCEYERV 238 >4MPS-A nrPDB Length = 310 Score = 28.5 bits (62), Expect = 2.4, Method: Compositional matrix adjust. Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 15/118 (12%) Query: 21 DWDALPPKRPRLGAGNKIG-GRRLIVVLEGASLETVKVGKTYELLNCDKHKSILLKNGRD 79 +W+ PK K+G +R VV SL+ ++G+ D H ++L NG Sbjct: 68 EWEGYLPKE---NFRTKVGPWQRCAVVSSAGSLKNSQLGR-----EIDNHDAVLRFNGAP 119 Query: 80 PGEARPDITHQSLLMLMDSPL--NRAGLLQVYIHTQKNVLIEVNP---QTRIPRTFDR 132 + D+ ++ + LM+S L L+ ++T+ +LI +P IP+ + + Sbjct: 120 TDNFQQDVGSKTTIRLMNSQLVTTEKRFLKDSLYTE-GILIVWDPSVYHADIPKWYQK 176 >4V03-A nrPDB Length = 257 Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust. Identities = 15/44 (34%), Positives = 21/44 (47%) Query: 94 MLMDSPLNRAGLLQVYIHTQKNVLIEVNPQTRIPRTFDRFCGLM 137 +L+DSP Q+ + LI VNP+ R DR GL+ Sbjct: 118 ILVDSPAGIEKGFQIAVSPADKALIVVNPEVSSIRDADRVIGLL 161 >4JS2-A nrPDB Length = 318 Score = 27.7 bits (60), Expect = 5.1, Method: Compositional matrix adjust. Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 7/80 (8%) Query: 21 DWDALPPKRPRLGAGNKIGGRRLIVVLEGASLETVKVGKTYELLNCDKHKSILLKNGRDP 80 +W+ PK G R VV SL++ ++G+ D H ++L NG Sbjct: 76 EWEGYLPKESIRTKAGPWG--RCAVVSSAGSLKSSQLGR-----EIDDHDAVLRFNGAPT 128 Query: 81 GEARPDITHQSLLMLMDSPL 100 + D+ ++ + LM+S L Sbjct: 129 ANFQQDVGTKTTIRLMNSQL 148 >3HPA-A nrPDB Length = 479 Score = 27.3 bits (59), Expect = 6.8, Method: Compositional matrix adjust. Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 8/83 (9%) Query: 62 ELLNCDKHKSILLKNGRDPGEARPD---ITHQSLLMLMDSPLNRAGLLQVYIHTQKNVLI 118 E +N ++H N +RP + H +L+ MD R L ++ + N ++ Sbjct: 8 ERMNLEQHAGARAPN---TSSSRPKTLLVKHADVLVTMDD--TRRELRDAGLYIEDNRIV 62 Query: 119 EVNPQTRIPRTFDRFCGLMVQLL 141 V P +P T D L L+ Sbjct: 63 AVGPSAELPETADEVLDLRGHLV 85 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5FAI-A nrPDB 360 e-100 2V3J-A nrPDB 335 1e-92 5OQL-e nrPDB 310 5e-85 3O7B-A nrPDB 223 7e-59 3BBD-A nrPDB 221 3e-58 Sequences not found previously or not previously below threshold: 1LLQ-A nrPDB 39 0.002 4V03-A nrPDB 37 0.008 3PSP-A nrPDB 32 0.30 3L3F-X nrPDB 32 0.30 3GAE-A nrPDB 32 0.30 1CRU-A nrPDB 30 1.2 3R9I-A nrPDB 29 1.4 4UFZ-A nrPDB 28 4.3 >5FAI-A nrPDB Length = 232 Score = 360 bits (925), Expect = e-100, Method: Composition-based stats. Identities = 231/231 (100%), Positives = 231/231 (100%) Query: 14 SGGEQAQDWDALPPKRPRLGAGNKIGGRRLIVVLEGASLETVKVGKTYELLNCDKHKSIL 73 SGGEQAQDWDALPPKRPRLGAGNKIGGRRLIVVLEGASLETVKVGKTYELLNCDKHKSIL Sbjct: 2 SGGEQAQDWDALPPKRPRLGAGNKIGGRRLIVVLEGASLETVKVGKTYELLNCDKHKSIL 61 Query: 74 LKNGRDPGEARPDITHQSLLMLMDSPLNRAGLLQVYIHTQKNVLIEVNPQTRIPRTFDRF 133 LKNGRDPGEARPDITHQSLLMLMDSPLNRAGLLQVYIHTQKNVLIEVNPQTRIPRTFDRF Sbjct: 62 LKNGRDPGEARPDITHQSLLMLMDSPLNRAGLLQVYIHTQKNVLIEVNPQTRIPRTFDRF 121 Query: 134 CGLMVQLLHKLSVRAADGPQKLLKVIKNPVSDHFPVGCMKVGTSFSIPVVSDVRELVPSS 193 CGLMVQLLHKLSVRAADGPQKLLKVIKNPVSDHFPVGCMKVGTSFSIPVVSDVRELVPSS Sbjct: 122 CGLMVQLLHKLSVRAADGPQKLLKVIKNPVSDHFPVGCMKVGTSFSIPVVSDVRELVPSS 181 Query: 194 DPIVFVVGAFAHGKVSVEYTEKMVSISNYPLSAALTCAKLTTAFEEVWGVI 244 DPIVFVVGAFAHGKVSVEYTEKMVSISNYPLSAALTCAKLTTAFEEVWGVI Sbjct: 182 DPIVFVVGAFAHGKVSVEYTEKMVSISNYPLSAALTCAKLTTAFEEVWGVI 232 >2V3J-A nrPDB Length = 258 Score = 335 bits (858), Expect = 1e-92, Method: Composition-based stats. Identities = 124/242 (51%), Positives = 158/242 (65%), Gaps = 11/242 (4%) Query: 13 RSGGEQAQDWDALPPKRPRLGAGNKIGGRRLIVVLEGASLETVKV------GKTYELLNC 66 + G ++A +P P L + +KI +R+IVVL ASLET K+ G Y LLNC Sbjct: 12 KGGDQKALPASLVPQAPPVLTSKDKI-TKRMIVVLAMASLETHKISSNGPGGDKYVLLNC 70 Query: 67 DKHKSILLKNGRDPGEARPDITHQSLLMLMDSPLNRAGLLQVYIHTQKNVLIEVNPQTRI 126 D H+ +L K GRD EARPDITHQ LL L+DSP+N+AG LQVYI T + +LIEVNP RI Sbjct: 71 DDHQGLLKKMGRDISEARPDITHQCLLTLLDSPINKAGKLQVYIQTSRGILIEVNPTVRI 130 Query: 127 PRTFDRFCGLMVQLLHKLSVRAADGPQKLLKVIKNPVSDHFPVGCMKVGTSFSIPV--VS 184 PRTF RF GLMVQLLHKLS+R+ + +KLLKVIKNP++DH P C KV SF PV V Sbjct: 131 PRTFKRFSGLMVQLLHKLSIRSVNSEEKLLKVIKNPITDHLPTKCRKVTLSFDAPVIRVQ 190 Query: 185 DVRELVPSSDPIVFVVGAFAHGK--VSVEYTEKMVSISNYPLSAALTCAKLTTAFEEVWG 242 D E + + I VGA A GK + EY ++ V +SNYPLSA++ C+K E+ W Sbjct: 191 DYIEKLDDDESICVFVGAMARGKDNFADEYVDEKVGLSNYPLSASVACSKFCHGAEDAWN 250 Query: 243 VI 244 ++ Sbjct: 251 IL 252 >5OQL-e nrPDB Length = 252 Score = 310 bits (793), Expect = 5e-85, Method: Composition-based stats. Identities = 119/250 (47%), Positives = 151/250 (60%), Gaps = 23/250 (9%) Query: 17 EQAQDWDALPPKRPRLGAG-------NKIGGRRLIVVLEGASLETVKVG----------K 59 + A PP P+L A N +RLIVVL ASLET K + Sbjct: 4 QTAGTQSLPPPALPQLVAEQHVPIPPNDKDTKRLIVVLSNASLETYKASHGTNRNGVREE 63 Query: 60 TYELLNCDKHKSILLKNGRDPGEARPDITHQSLLMLMDSPLNRAGLLQVYIHTQKNVLIE 119 Y LLN D+H I+ K RD +ARPDITHQ LL L+DSP+N+AG LQ+YI T K VLIE Sbjct: 64 KYTLLNSDEHIGIMRKMNRDISDARPDITHQCLLTLLDSPINKAGKLQIYIQTAKGVLIE 123 Query: 120 VNPQTRIPRTFDRFCGLMVQLLHKLSVRAADGPQKLLKVIKNPVSDHFPVGCMKVGTSFS 179 V+P RIPRTF RF GLMVQLLH+LS++ + +KLLKVI+NP++DH P C KV SF Sbjct: 124 VSPTVRIPRTFKRFAGLMVQLLHRLSIKGTNTNEKLLKVIQNPITDHLPPNCRKVTLSFD 183 Query: 180 IPVVSDVRELVPSSDP---IVFVVGAFAHG--KVSVEYTEKMVSISNYPLSAALTCAKLT 234 P+V VR+ V + P I VGA A G + Y ++ +SISNY LSA++ C+K Sbjct: 184 APLVR-VRDYVDTLGPNESICVFVGAMAKGPDNFADAYVDEKISISNYSLSASVACSKFC 242 Query: 235 TAFEEVWGVI 244 A E+ W +I Sbjct: 243 HACEDAWDII 252 >3O7B-A nrPDB Length = 244 Score = 223 bits (567), Expect = 7e-59, Method: Composition-based stats. Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 20/197 (10%) Query: 53 ETVKVGKTYE--LLNCDKHKSILLKNGRDPGEARPDITHQSLLMLMDSPLNRAGLLQVYI 110 + ++ GK E LL+ KH + + RPDI HQ LL+L+DSPL +VY+ Sbjct: 53 DAIRRGKRPEKILLDDSKHHTAMKSLEFREKRGRPDIVHQCLLLLLDSPLRD---FEVYV 109 Query: 111 HTQKNVLIEVNPQTRIPRTFDRFCGLMVQLLHKLSVRAADGPQKLLKVI--KNPVSDHFP 168 HT +I VN +TR+PR ++RF GLM +L + + A D K + ++ V Sbjct: 110 HTLNGEIIWVNRETRLPRNYNRFVGLMEKLFEERRITAGDTTLIEFKDVGLRDIVRGRDV 169 Query: 169 VGCMKVGTSFSIPVVSDVRELVPSSDPIVFVVGAFAHGKVSVEYTEK-----MVSISNYP 223 + + G F + D + +GAF HG E + VS+ Sbjct: 170 LLFREKGGRFEFSELLD--------GDVAVCIGAFPHGDFFEETLRELGEFKEVSLGTES 221 Query: 224 LSAALTCAKLTTAFEEV 240 ++ +++ +E V Sbjct: 222 YTSLYVTSRVLCEYERV 238 >3BBD-A nrPDB Length = 205 Score = 221 bits (562), Expect = 3e-58, Method: Composition-based stats. Identities = 56/207 (27%), Positives = 100/207 (48%), Gaps = 24/207 (11%) Query: 45 VVLEGASLETV------KVGK----TYELLNCDKHKSILLKNGRDPGEARPDITHQSLLM 94 ++L ++LE + K+ K Y++L+ + H + K RPDI H SLL Sbjct: 5 IILAKSALELIPEEIKNKIRKSRVYKYDILDSNYHYKAMEKLKDKEMRGRPDIIHISLLN 64 Query: 95 LMDSPLNRAGLLQVYIHTQKNVLIEVNPQTRIPRTFDRFCGLMVQLLHKLSVRAADGPQK 154 ++DSP+N L +YIHT + ++++NP+TR+PR + RF G+M ++L +K Sbjct: 65 ILDSPINHEKKLNIYIHTYDDKVLKINPETRLPRNYFRFLGVMEKVLKGERNHLIKMEEK 124 Query: 155 LLKVIKNPVSDHFPVGCMKVGTSFSIPVVSDVRELVPSSDPIVFVVGAFAHGKVSVEYTE 214 L+ + N ++ + M + P +L+ D F++G F +GK+ + + Sbjct: 125 TLEDLLNEINAK-KIAIMTKTGKLTHP------KLLKEYD--TFIIGGFPYGKLKINKEK 175 Query: 215 -----KMVSISNYPLSAALTCAKLTTA 236 K +SI N L A C + + Sbjct: 176 VFGDIKEISIYNKGLMAWTVCGIICYS 202 >1LLQ-A nrPDB Length = 605 Score = 38.9 bits (89), Expect = 0.002, Method: Composition-based stats. Identities = 33/205 (16%), Positives = 73/205 (35%), Gaps = 20/205 (9%) Query: 57 VGKTYELLNCDKHKSILLKNGRDPGEARPDITHQSLLMLMDSPLNRAGLLQVYIHTQKNV 116 GK Y+ L + K+ K G+ D + + L+D ++ + I +V Sbjct: 243 RGKDYDTLLDNFMKACTKKYGQKTLIQFEDFANPNAFRLLDKYQDKYTMFNDDIQGTASV 302 Query: 117 LI-------EVNPQTRIPRTFDRF------CGLMVQLLHKLSVRAADGPQ----KLLKVI 159 ++ V + + F G+ ++H++ + L I Sbjct: 303 IVAGLLTCTRVTKKLVSQEKYLFFGAGAASTGIAEMIVHQMQNEGISKEEACNRIYLMDI 362 Query: 160 KNPVS-DHFPVGCMKVGTSFSIPVVSDVRELVPSSDPIVFVVGAFAHGKVSVEYTEKMVS 218 V+ + + V + +P + + E++ ++ P + + G + E M Sbjct: 363 DGLVTKNRKEMNPRHVQFAKDMPETTSILEVIRAARPGALIGASTVRGAFNEEVIRAMAE 422 Query: 219 ISNYPLSAALT--CAKLTTAFEEVW 241 I+ P+ AL+ +K EE + Sbjct: 423 INERPIIFALSNPTSKAECTAEEAY 447 >4V03-A nrPDB Length = 257 Score = 37.0 bits (84), Expect = 0.008, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 46/126 (36%), Gaps = 5/126 (3%) Query: 95 LMDSPLNRAGLLQVYIHTQKNVLIEVNPQTRIPRTFDRFCGLMVQLLHKLSVRAADGPQK 154 L+DSP Q+ + LI VNP+ R DR GL+ + + Sbjct: 119 LVDSPAGIEKGFQIAVSPADKALIVVNPEVSSIRDADRVIGLLESM--DKRNYKVIVNRI 176 Query: 155 LLKVIKN--PVSDHFPVGCMKVGTSFSIPVVSDVRELVPSSDPIVFVVGAFAHGKVSVEY 212 +++K +S V +K IP + + +PI + F + ++ Sbjct: 177 KWEMVKRGAMLSVEDIVDILKAEIIGIIPEEPKLVDFTNRGEPI-VLDEKFPASQAIIDT 235 Query: 213 TEKMVS 218 +++ Sbjct: 236 ARRLMG 241 >3PSP-A nrPDB Length = 425 Score = 31.6 bits (70), Expect = 0.30, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 35/101 (34%), Gaps = 3/101 (2%) Query: 146 VRAADGPQKLLKV-IKNPVSD--HFPVGCMKVGTSFSIPVVSDVRELVPSSDPIVFVVGA 202 + + +K I + H ++ SF+ + S+ P+ D + +V Sbjct: 197 IVKINSNEKTFDDEILAQIGGALHDIDESWELLLSFANTIRSNWEIKTPAYDIVRLIVKK 256 Query: 203 FAHGKVSVEYTEKMVSISNYPLSAALTCAKLTTAFEEVWGV 243 + +Y E+ + N L+ + E WGV Sbjct: 257 LPYSSDIKDYIEEGLGNKNITLTMLTVRILVNCFNNENWGV 297 >3L3F-X nrPDB Length = 362 Score = 31.6 bits (70), Expect = 0.30, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 35/101 (34%), Gaps = 3/101 (2%) Query: 146 VRAADGPQKLLKV-IKNPVSD--HFPVGCMKVGTSFSIPVVSDVRELVPSSDPIVFVVGA 202 + + +K I + H ++ SF+ + S+ P+ D + +V Sbjct: 134 IVKINSNEKTFDDEILAQIGGALHDIDESWELLLSFANTIRSNWEIKTPAYDIVRLIVKK 193 Query: 203 FAHGKVSVEYTEKMVSISNYPLSAALTCAKLTTAFEEVWGV 243 + +Y E+ + N L+ + E WGV Sbjct: 194 LPYSSDIKDYIEEGLGNKNITLTMLTVRILVNCFNNENWGV 234 >3GAE-A nrPDB Length = 253 Score = 31.6 bits (70), Expect = 0.30, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 35/101 (34%), Gaps = 3/101 (2%) Query: 146 VRAADGPQKLLKV-IKNPVSD--HFPVGCMKVGTSFSIPVVSDVRELVPSSDPIVFVVGA 202 + + +K I + H ++ SF+ + S+ P+ D + +V Sbjct: 25 IVKINSNEKTFDDEILAQIGGALHDIDESWELLLSFANTIRSNWEIKTPAYDIVRLIVKK 84 Query: 203 FAHGKVSVEYTEKMVSISNYPLSAALTCAKLTTAFEEVWGV 243 + +Y E+ + N L+ + E WGV Sbjct: 85 LPYSSDIKDYIEEGLGNKNITLTMLTVRILVNCFNNENWGV 125 >1CRU-A nrPDB Length = 454 Score = 29.7 bits (65), Expect = 1.2, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 36/82 (43%), Gaps = 5/82 (6%) Query: 111 HTQKNVLIEVNPQTRIPRTFDRFCGLMVQLL---HKLSVRAADGPQ-KLLKVIKNPVSDH 166 HT ++ +N IP+ F G++ + H+ A P KLL+ + P SD Sbjct: 193 HTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLGHRNPQGLAFTPNGKLLQSEQGPNSD- 251 Query: 167 FPVGCMKVGTSFSIPVVSDVRE 188 + + G ++ P V+ ++ Sbjct: 252 DEINLIVKGGNYGWPNVAGYKD 273 >3R9I-A nrPDB Length = 260 Score = 29.3 bits (64), Expect = 1.4, Method: Composition-based stats. Identities = 24/134 (17%), Positives = 48/134 (35%), Gaps = 9/134 (6%) Query: 93 LMLMDSPLNRAGLLQVYIHTQKNVLIEVNPQTRIPRTFDRFCGLMVQLLHKLSVRAADGP 152 ++ DSP + ++ +I NP+ R DR G++ + Sbjct: 116 FIVCDSPAGIETGALMALYFADEAIITTNPEVSSVRDSDRILGILASKSRRAENGEEPIK 175 Query: 153 QKLLKVIKNP--------VSDHFPVGCMKVGTSFSIPVVSDVRELVPSSDPIVFVVGAFA 204 + LL NP +S + +++ IP V +P++ + A A Sbjct: 176 EHLLLTRYNPGRVSRGDMLSMEDVLEILRIKLVGVIPEDQSVLRASNQGEPVILDINADA 235 Query: 205 HGKVSVEYTEKMVS 218 GK + E+++ Sbjct: 236 -GKAYADTVERLLG 248 >4UFZ-A nrPDB Length = 324 Score = 27.8 bits (60), Expect = 4.3, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 44/113 (38%), Gaps = 9/113 (7%) Query: 71 SILLKNGRDPGEARPDITHQSLLML---MDSPLNRAGLLQVYIHTQKNVLIEVNPQTRIP 127 L + + RP + + + + +D P LQ K++ I VNP+ R+ Sbjct: 206 GSLRQLDPNITSKRPLVLNAYGIGIAEGVDLPTTHYARLQ----WLKSIGIPVNPEIRLC 261 Query: 128 RTFDRFCGLMVQLLHKLSVRAADGPQKLLKVIKNPVSDHFPVGCMKVGTSFSI 180 D G + +K S D +LK+ N ++ +G + ++I Sbjct: 262 NGADEVLGFYRDIQNKRSSLGYDIDGTVLKI--NDIALQNELGFISKAPRWAI 312 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.311 0.130 0.338 Lambda K H 0.267 0.0399 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8,760,965 Number of Sequences: 36641 Number of extensions: 312137 Number of successful extensions: 765 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 16 Number of HSP's successfully gapped in prelim test: 7 Number of HSP's that attempted gapping in prelim test: 729 Number of HSP's gapped (non-prelim): 23 length of query: 244 length of database: 10,336,785 effective HSP length: 94 effective length of query: 150 effective length of database: 6,892,531 effective search space: 1033879650 effective search space used: 1033879650 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 58 (27.0 bits)