BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q92871 (262 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 6CFS-A nrPDB 538 e-153 2AMY-A nrPDB 347 4e-96 5UE7-A nrPDB 270 5e-73 2I55-A nrPDB 242 1e-64 3F9R-A nrPDB 232 1e-61 4BND-A nrPDB 59 3e-09 1RLT-A nrPDB 33 0.092 5DXI-A nrPDB 33 0.12 5GVX-A nrPDB 32 0.38 5DXN-A nrPDB 30 1.2 3NEM-A nrPDB 30 1.4 3VR8-A nrPDB 29 2.4 3FCE-A nrPDB 28 2.9 2P4S-A nrPDB 28 2.9 4CIU-A nrPDB 28 3.4 2BGN-E nrPDB 28 4.2 3HEA-A nrPDB 28 4.8 1HNF-A nrPDB 27 7.1 4N0B-A nrPDB 27 9.1 5X03-B nrPDB 27 9.1 >6CFS-A nrPDB Length = 262 Score = 538 bits (1385), Expect = e-153, Method: Compositional matrix adjust. Identities = 261/262 (99%), Positives = 261/262 (99%) Query: 1 MAVTAQAARRKERVLCLFDVDGTLTPARQKIDPEVAAFLQKLRSRVQIGVVGGSDYCKIA 60 MAVTAQAARRKERVLCLFDVDGTLTPARQKIDPEVAAFLQKLRSRVQIGVVGGSDYCKIA Sbjct: 1 MAVTAQAARRKERVLCLFDVDGTLTPARQKIDPEVAAFLQKLRSRVQIGVVGGSDYCKIA 60 Query: 61 EQLGDGDEVIEKFDYVFAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYMALLR 120 EQLGDGDEVIEKFDYVFAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYMALLR Sbjct: 61 EQLGDGDEVIEKFDYVFAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYMALLR 120 Query: 121 LPKKRGTFIEFRNGMLNISPIGRSCTLEERIEFSELDKKEKIREKFVEALKTEFAGKGLR 180 LPKKRGTFIEFRNGMLNISPIGRSCTLEERIEFSELDKKEKIREKFVEALKTEFAGKGLR Sbjct: 121 LPKKRGTFIEFRNGMLNISPIGRSCTLEERIEFSELDKKEKIREKFVEALKTEFAGKGLR 180 Query: 181 FSRGGMISFDVFPEGWDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSV 240 FSRGG ISFDVFPEGWDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSV Sbjct: 181 FSRGGQISFDVFPEGWDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSV 240 Query: 241 VSPQDTVQRCREIFFPETAHEA 262 VSPQDTVQRCREIFFPETAHEA Sbjct: 241 VSPQDTVQRCREIFFPETAHEA 262 >2AMY-A nrPDB Length = 246 Score = 347 bits (889), Expect = 4e-96, Method: Compositional matrix adjust. Identities = 164/241 (68%), Positives = 199/241 (82%), Gaps = 2/241 (0%) Query: 14 VLCLFDVDGTLTPARQKIDPEVAAFLQKLRSRVQIGVVGGSDYCKIAEQLGDGDEVIEKF 73 LCLFDVDGTLT RQKI E+ FLQKLR +++IGVVGGSD+ K+ EQLG+ +V+EK+ Sbjct: 7 ALCLFDVDGTLTAPRQKITKEMDDFLQKLRQKIKIGVVGGSDFEKVQEQLGN--DVVEKY 64 Query: 74 DYVFAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYMALLRLPKKRGTFIEFRN 133 DYVF ENG V YK G+LL +Q IQ+HLGE L+QDLIN+CLSY+A ++LPKKRGTFIEFRN Sbjct: 65 DYVFPENGLVAYKDGKLLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTFIEFRN 124 Query: 134 GMLNISPIGRSCTLEERIEFSELDKKEKIREKFVEALKTEFAGKGLRFSRGGMISFDVFP 193 GMLN+SPIGRSC+ EERIEF ELDKKE IR+KFV L+ EFAGKGL FS GG ISFDVFP Sbjct: 125 GMLNVSPIGRSCSQEERIEFYELDKKENIRQKFVADLRKEFAGKGLTFSIGGQISFDVFP 184 Query: 194 EGWDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREI 253 +GWDKRYCL ++ D + TI+FFG++T PGGND EIF DPRT+G+SV +P+DT + C + Sbjct: 185 DGWDKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRRICELL 244 Query: 254 F 254 F Sbjct: 245 F 245 >5UE7-A nrPDB Length = 252 Score = 270 bits (690), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 130/248 (52%), Positives = 170/248 (68%), Gaps = 2/248 (0%) Query: 7 AARRKERVLCLFDVDGTLTPARQKIDPEVAAFLQKLRSRVQIGVVGGSDYCKIAEQLGDG 66 A ++ + L LFDVDGTLTPAR I E+ L+KLR +V IG VGGSD K EQLG Sbjct: 4 ANKQDPKTLVLFDVDGTLTPARLTISEEMKKTLEKLREKVVIGFVGGSDLSKQVEQLGPN 63 Query: 67 DEVIEKFDYVFAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYMALLRLPKKRG 126 V+ FDY F+ENG YK G+ L+ Q+ N +G E L+ F L Y++ + LP +RG Sbjct: 64 --VLNDFDYCFSENGLTAYKLGKELASQSFINWIGNEKYNKLVKFILRYLSDIDLPIRRG 121 Query: 127 TFIEFRNGMLNISPIGRSCTLEERIEFSELDKKEKIREKFVEALKTEFAGKGLRFSRGGM 186 TFIEFRNGM+N+SPIGR+ + +ER ++ + DK+ IRE VEALK EF GL +S GG Sbjct: 122 TFIEFRNGMINVSPIGRNASTQERNDYEKFDKQHHIRETMVEALKKEFPDFGLTYSIGGQ 181 Query: 187 ISFDVFPEGWDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDT 246 ISFDVFP GWDK YCL ++ + F+ IHFFG+++ GGND+EI+ DPRT+GH+V SP DT Sbjct: 182 ISFDVFPTGWDKTYCLQHVEDEHFENIHFFGDKSYKGGNDYEIYNDPRTIGHAVNSPDDT 241 Query: 247 VQRCREIF 254 ++ E F Sbjct: 242 IRILNETF 249 >2I55-A nrPDB Length = 247 Score = 242 bits (618), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 121/236 (51%), Positives = 162/236 (68%), Gaps = 4/236 (1%) Query: 13 RVLCLFDVDGTLTPARQKIDPEVAAFLQKLRSR-VQIGVVGGSDYCKIAEQLGDGDEVIE 71 + + LFDVDGTLTP R ++ L K R+ ++GVVGGSD+ K EQLG+ ++E Sbjct: 4 KAILLFDVDGTLTPPRNPETHDMKEALLKARAAGFKLGVVGGSDFAKQKEQLGES--ILE 61 Query: 72 KFDYVFAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYMALLRLPKKRGTFIEF 131 FDYVF+ENG + YK G+ + ++ LG E + + CL +A L +P +RGTF+EF Sbjct: 62 DFDYVFSENGLLAYKDGKEFHRNSLLRALGNEKVVAFVKKCLHLIADLDIPVQRGTFVEF 121 Query: 132 RNGMLNISPIGRSCTLEERIEFSELDKKEKIREKFVEALKTEFAGKGLRFSRGGMISFDV 191 RNGM N+SPIGR+C+ +ER EF LDK+ IREK + LK F L +S GG ISFDV Sbjct: 122 RNGMFNVSPIGRNCSQQERDEFENLDKERHIREKLIRELKEAFPDYQLAYSVGGQISFDV 181 Query: 192 FPEGWDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTV 247 FP+GWDK YCL ++ D F+TIHFFG++TS GGND+EIF D RT+GHSV + +DT+ Sbjct: 182 FPKGWDKTYCLQFVEND-FETIHFFGDKTSEGGNDYEIFTDSRTIGHSVKTYKDTI 236 >3F9R-A nrPDB Length = 246 Score = 232 bits (591), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 115/243 (47%), Positives = 163/243 (67%), Gaps = 4/243 (1%) Query: 12 ERVLCLFDVDGTLTPARQKIDPEVAAFLQKLR-SRVQIGVVGGSDYCKIAEQLGDGDEVI 70 +RVL LFDVDGTLTP R E+ A +++ R + +G VGGSD+ K EQLG +V+ Sbjct: 3 KRVLLLFDVDGTLTPPRLCQTDEMRALIKRARGAGFCVGTVGGSDFAKQVEQLGR--DVL 60 Query: 71 EKFDYVFAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYMALLRLPKKRGTFIE 130 +FDYVFAENG + Y++G + +Q++ N LG + + + L +A L +P +RGTF+E Sbjct: 61 TQFDYVFAENGLLAYRNGLEIHRQSLLNALGNDRIVKFVKKTLRLIADLDIPVQRGTFVE 120 Query: 131 FRNGMLNISPIGRSCTLEERIEFSELDKKEKIREKFVEALKTEFAGKGLRFSRGGMISFD 190 +RNGM+N+SPIGR+C+ ER EF D + ++R + L+ F GL++S GG ISFD Sbjct: 121 YRNGMINVSPIGRNCSQAERDEFEVYDNEHRVRASLIAELENSFPDFGLKYSIGGQISFD 180 Query: 191 VFPEGWDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRC 250 VFP GWDK YCL + +D F+ IHFFG++T GGND+EI+ D RT+GH V S +DT+ Sbjct: 181 VFPVGWDKTYCLQFV-EDDFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTSYKDTIAEV 239 Query: 251 REI 253 +I Sbjct: 240 EKI 242 >4BND-A nrPDB Length = 253 Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 56/236 (23%), Positives = 102/236 (43%), Gaps = 29/236 (12%) Query: 11 KERVLCLFDVDGTLTPARQKIDPEVAAFLQKLRSRVQIGVVGGSDYCKIAEQLGDGDEVI 70 K + + FD+D TL + I PE+A L L + I + G Y + Q+ + Sbjct: 1 KMKKILSFDIDNTLNEPKMPIFPEMAELLATLSQKYIIAPISGQKYDQFLIQIINNLPES 60 Query: 71 EKFD--YVFAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYMALLRLPKKRGTF 128 D ++F GT Y H KQ L +E ++ AL + K+ G + Sbjct: 61 ANLDNFHLFVAQGTQYYAHKAGEWKQVFNYALTDEQANAIMG------ALEKAAKELGHW 114 Query: 129 -----------IEFRNGMLNISPIGRSCTLEERIEF-SELDKKEKIREKFVEALKTEFAG 176 E R M+ S IG+ +E + + ++ K+ +I + L +++A Sbjct: 115 DESVLLPGDEINENRESMIAYSAIGQKAGVEAKQAWDPDMTKRNEIAK-----LASQYAP 169 Query: 177 KGLRFSRGGMISFDVFPEGWDKRYCLDSLDQD---SFDTIHFFGNETSPGGNDFEI 229 + F G + + F G +K + ++ L ++ + + I +FG+ T PGGND+ + Sbjct: 170 E-FEFEVAGTTTINGFVPGQNKEFGMNHLMEELNVTKEEILYFGDMTQPGGNDYPV 224 >1RLT-A nrPDB Length = 271 Score = 33.5 bits (75), Expect = 0.092, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 11/101 (10%) Query: 19 DVDGT-LTPARQKIDPEVAAFLQKLRSR-VQIGVVGGSDYCKIAEQLGDGDEVIEKFDYV 76 D+DGT L A+ P A Q+L+ R ++ V G+ Y ++ E+ ++ +V Sbjct: 9 DMDGTFLNDAKTYNQPRFMAQYQELKKRGIKFVVASGNQYYQLISFF---PELKDEISFV 65 Query: 77 FAENGTVQYKHGRLLSKQTIQNH-----LGEELLQDLINFC 112 AENG + Y+HG+ L + H +GE L +NF Sbjct: 66 -AENGALVYEHGKQLFHGELTRHESRIVIGELLKDKQLNFV 105 >5DXI-A nrPDB Length = 302 Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust. Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 11/66 (16%) Query: 9 RRKERVLCLFDVDGTLTPARQKIDPEVAAFLQKLR---------SRVQIGVVGGSDYCKI 59 + +R L LFD DGTLTP Q DP A KL + QI ++ G D + Sbjct: 18 KESQRRLFLFDYDGTLTPIVQ--DPAAAIPSDKLNRILDVLSSDPKNQIWIISGRDQAFL 75 Query: 60 AEQLGD 65 + +G+ Sbjct: 76 EKWMGN 81 >5GVX-A nrPDB Length = 430 Score = 31.6 bits (70), Expect = 0.38, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 5/54 (9%) Query: 16 CLFDVDGTLT-----PARQKIDPEVAAFLQKLRSRVQIGVVGGSDYCKIAEQLG 64 FD DGTL+ P + P LQKL +R I V+ G D + +++G Sbjct: 183 VFFDFDGTLSDIVEDPDAAWLAPGALEALQKLAARCPIAVLSGRDLADVTQRVG 236 >5DXN-A nrPDB Length = 286 Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust. Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 11/65 (16%) Query: 9 RRKERVLCLFDVDGTLTPARQKIDPEVAA----FLQKLRS-----RVQIGVVGGSDYCKI 59 R+ + L +FD DGTLTP + DP+ A L+ L++ R + ++ G D + Sbjct: 16 RKARKRLFMFDYDGTLTPIVK--DPQAAIPSDRVLRTLKTLAADPRNAVWIISGRDQAFL 73 Query: 60 AEQLG 64 E +G Sbjct: 74 DEWMG 78 >3NEM-A nrPDB Length = 438 Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust. Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%) Query: 13 RVLCLFDVDGT--LTPARQKIDPEVAAFLQKLRSRVQIGVVGGSDYCKIAE 61 + L + D DG +T ++K+DPE+ + KLRS + V G ++ A+ Sbjct: 35 KFLWIRDRDGIVQITAPKKKVDPELFKLIPKLRSEDVVAVEGVVNFTPKAK 85 >3VR8-A nrPDB Length = 645 Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust. Identities = 15/38 (39%), Positives = 19/38 (50%) Query: 64 GDGDEVIEKFDYVFAENGTVQYKHGRLLSKQTIQNHLG 101 G G+E I D V NG V RL ++T+Q H G Sbjct: 468 GAGEESIANLDAVRYANGDVPTAELRLTMQKTMQKHAG 505 >3FCE-A nrPDB Length = 512 Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust. Identities = 22/95 (23%), Positives = 40/95 (42%), Gaps = 15/95 (15%) Query: 15 LCLFDVDGTLTPARQKIDPEVAAFLQKLRSRVQIGVVGGSDYCKIAEQLGDGDEVIEKFD 74 L + DGT+ P +K + + V +G +G + + A + DG+ + D Sbjct: 330 LLIMKEDGTIAPDGEKGEIVIVG------PSVSVGYLGSPELTEKAFTMIDGERAYKTGD 383 Query: 75 YVFAENGTVQYK---------HGRLLSKQTIQNHL 100 + ENG + Y HG + + I++HL Sbjct: 384 AGYVENGLLFYNGRLDFQIKLHGYRMELEEIEHHL 418 >2P4S-A nrPDB Length = 373 Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust. Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 5/43 (11%) Query: 34 EVAAFL-QKLRSRVQIGVVGGSDYCKIAEQLGDGDEVIEKFDY 75 E+A +L ++ R ++G++ GS +AEQL D ++ FDY Sbjct: 97 EIATYLLERTELRPKVGIICGSGLGTLAEQLTD----VDSFDY 135 >4CIU-A nrPDB Length = 727 Score = 28.5 bits (62), Expect = 3.4, Method: Compositional matrix adjust. Identities = 34/127 (26%), Positives = 55/127 (43%), Gaps = 22/127 (17%) Query: 51 VGGSDYCK-IAEQLGDGDEVIEKFDY------------VFAENGTVQYKHGRLLSKQTIQ 97 VG ++ CK +A + D DE + + D V A G V Y+ G L++ + Sbjct: 467 VGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRR 526 Query: 98 NHLGEELLQ-------DLINFCLSYMALLRLPKKRGTFIEFRNGMLNISPIGRSCTLEER 150 LL D+ N L + RL +G ++FRN ++ ++ S ++ER Sbjct: 527 RPYSVILLDAVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQER 586 Query: 151 IEFSELD 157 F ELD Sbjct: 587 --FGELD 591 >2BGN-E nrPDB Length = 363 Score = 28.1 bits (61), Expect = 4.2, Method: Compositional matrix adjust. Identities = 40/176 (22%), Positives = 71/176 (40%), Gaps = 22/176 (12%) Query: 9 RRKERVLCLFDVDGTLTPARQKIDP-EVAAFLQKLRSRVQIGVVGGSDYCKIAEQLGDGD 67 + +E+ + D+ G T + P V A+ + ++S V V G ++G + Sbjct: 171 KYREQTVVAIDLAGDETIEGSSLFPGHVQAYAEAVKSGVHRTVHAG--------EVGSAN 222 Query: 68 EVIEKFDYVFAENGTVQYKHG-RLLSKQTIQNHLGEELLQDLINFCLSYMALLRLPKKRG 126 V E D + E + HG L T+ N L +E + I SY+ P Sbjct: 223 VVKEAVDTLKTE----RLGHGYHTLEDTTLYNRLRQENMHFEICPWSSYLTGAWKPDTEH 278 Query: 127 TFIEFRNGMLNIS-----PIGRSCTLEERIEFSELD---KKEKIREKFVEALKTEF 174 I F+N +N S P+ TL+ + ++ D +E+ + + A K+ F Sbjct: 279 AVIRFKNDQVNYSLNTDDPLIFKSTLDTDYQMTKKDMGFTEEEFKRLNINAAKSSF 334 >3HEA-A nrPDB Length = 271 Score = 27.7 bits (60), Expect = 4.8, Method: Compositional matrix adjust. Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 11/63 (17%) Query: 175 AGKGLRFSRGGMISFDVFPEGWDKRYCLDSLDQDSFDTIHF----FGNETSPG-GNDFEI 229 +GK + FS G + D++ Y ++ L + TI F FG P GND++ Sbjct: 18 SGKPVLFSHGWPLDADMW------EYQMEYLSSRGYRTIAFDRRGFGRSDQPWTGNDYDT 71 Query: 230 FAD 232 FAD Sbjct: 72 FAD 74 >1HNF-A nrPDB Length = 182 Score = 27.3 bits (59), Expect = 7.1, Method: Compositional matrix adjust. Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 15/111 (13%) Query: 54 SDYCKIAEQLGDGDEVIEKFDYVFAENGTVQYKHGRL----LSKQTIQNHLGEELLQDLI 109 SD KIA+ + + EK Y +NGT++ KH + + K +I + G+ +L+ + Sbjct: 39 SDKKKIAQFRKEKETFKEKDTYKLFKNGTLKIKHLKTDDQDIYKVSIYDTKGKNVLEKI- 97 Query: 110 NFCLSYMALLRLPKKRGTFI------EFRNGM---LNISPIGRSCTLEERI 151 F L + PK T I E NG LN+ G+ L +R+ Sbjct: 98 -FDLKIQERVSKPKISWTCINTTLTCEVMNGTDPELNLYQDGKHLKLSQRV 147 >4N0B-A nrPDB Length = 479 Score = 26.9 bits (58), Expect = 9.1, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 21/78 (26%) Query: 113 LSYMAL----LRLPKKRGTFIEFRNGMLNISPIGRSCTLEERIEFSELDK---------K 159 +SYM L LR K+RG ++ + + + TL+E IE E K K Sbjct: 320 ISYMVLPPELLRAYKQRGYDLQTCSSLTQL-------TLQEFIESGEYQKHIKKMKQHYK 372 Query: 160 EKIREKFVEALKTEFAGK 177 EK RE+ + AL+ EF+G+ Sbjct: 373 EK-RERLITALEAEFSGE 389 >5X03-B nrPDB Length = 365 Score = 26.9 bits (58), Expect = 9.1, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 21/78 (26%) Query: 113 LSYMAL----LRLPKKRGTFIEFRNGMLNISPIGRSCTLEERIEFSELDK---------K 159 +SYM L LR K+RG ++ + + + TL+E IE E K K Sbjct: 213 ISYMVLPPELLRAYKQRGYDLQTCSSLTQL-------TLQEFIESGEYQKHIKKMKQHYK 265 Query: 160 EKIREKFVEALKTEFAGK 177 EK RE+ + AL+ EF+G+ Sbjct: 266 EK-RERLITALEAEFSGE 282 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 6CFS-A nrPDB 433 e-122 2AMY-A nrPDB 378 e-105 5UE7-A nrPDB 377 e-105 3F9R-A nrPDB 357 4e-99 2I55-A nrPDB 353 6e-98 4BND-A nrPDB 250 4e-67 Sequences not found previously or not previously below threshold: 1RLT-A nrPDB 36 0.020 5GVX-A nrPDB 33 0.12 1RKQ-A nrPDB 33 0.12 3FCE-A nrPDB 32 0.24 6JR6-A nrPDB 32 0.35 5DXI-A nrPDB 31 0.60 2BOF-X nrPDB 30 0.96 5DXN-A nrPDB 29 1.6 3D2D-A nrPDB 29 1.7 3OR2-B nrPDB 29 2.2 2GXQ-A nrPDB 29 2.2 4KBG-A nrPDB 29 2.3 3KBB-A nrPDB 29 2.6 4QAX-A nrPDB 28 3.0 6DX0-A nrPDB 28 3.1 4USZ-A nrPDB 27 6.8 5H02-A nrPDB 27 7.1 CONVERGED! >6CFS-A nrPDB Length = 262 Score = 433 bits (1113), Expect = e-122, Method: Composition-based stats. Identities = 261/262 (99%), Positives = 261/262 (99%) Query: 1 MAVTAQAARRKERVLCLFDVDGTLTPARQKIDPEVAAFLQKLRSRVQIGVVGGSDYCKIA 60 MAVTAQAARRKERVLCLFDVDGTLTPARQKIDPEVAAFLQKLRSRVQIGVVGGSDYCKIA Sbjct: 1 MAVTAQAARRKERVLCLFDVDGTLTPARQKIDPEVAAFLQKLRSRVQIGVVGGSDYCKIA 60 Query: 61 EQLGDGDEVIEKFDYVFAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYMALLR 120 EQLGDGDEVIEKFDYVFAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYMALLR Sbjct: 61 EQLGDGDEVIEKFDYVFAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYMALLR 120 Query: 121 LPKKRGTFIEFRNGMLNISPIGRSCTLEERIEFSELDKKEKIREKFVEALKTEFAGKGLR 180 LPKKRGTFIEFRNGMLNISPIGRSCTLEERIEFSELDKKEKIREKFVEALKTEFAGKGLR Sbjct: 121 LPKKRGTFIEFRNGMLNISPIGRSCTLEERIEFSELDKKEKIREKFVEALKTEFAGKGLR 180 Query: 181 FSRGGMISFDVFPEGWDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSV 240 FSRGG ISFDVFPEGWDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSV Sbjct: 181 FSRGGQISFDVFPEGWDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSV 240 Query: 241 VSPQDTVQRCREIFFPETAHEA 262 VSPQDTVQRCREIFFPETAHEA Sbjct: 241 VSPQDTVQRCREIFFPETAHEA 262 >2AMY-A nrPDB Length = 246 Score = 378 bits (971), Expect = e-105, Method: Composition-based stats. Identities = 164/241 (68%), Positives = 199/241 (82%), Gaps = 2/241 (0%) Query: 14 VLCLFDVDGTLTPARQKIDPEVAAFLQKLRSRVQIGVVGGSDYCKIAEQLGDGDEVIEKF 73 LCLFDVDGTLT RQKI E+ FLQKLR +++IGVVGGSD+ K+ EQLG+ +V+EK+ Sbjct: 7 ALCLFDVDGTLTAPRQKITKEMDDFLQKLRQKIKIGVVGGSDFEKVQEQLGN--DVVEKY 64 Query: 74 DYVFAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYMALLRLPKKRGTFIEFRN 133 DYVF ENG V YK G+LL +Q IQ+HLGE L+QDLIN+CLSY+A ++LPKKRGTFIEFRN Sbjct: 65 DYVFPENGLVAYKDGKLLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTFIEFRN 124 Query: 134 GMLNISPIGRSCTLEERIEFSELDKKEKIREKFVEALKTEFAGKGLRFSRGGMISFDVFP 193 GMLN+SPIGRSC+ EERIEF ELDKKE IR+KFV L+ EFAGKGL FS GG ISFDVFP Sbjct: 125 GMLNVSPIGRSCSQEERIEFYELDKKENIRQKFVADLRKEFAGKGLTFSIGGQISFDVFP 184 Query: 194 EGWDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREI 253 +GWDKRYCL ++ D + TI+FFG++T PGGND EIF DPRT+G+SV +P+DT + C + Sbjct: 185 DGWDKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRRICELL 244 Query: 254 F 254 F Sbjct: 245 F 245 >5UE7-A nrPDB Length = 252 Score = 377 bits (969), Expect = e-105, Method: Composition-based stats. Identities = 130/248 (52%), Positives = 170/248 (68%), Gaps = 2/248 (0%) Query: 7 AARRKERVLCLFDVDGTLTPARQKIDPEVAAFLQKLRSRVQIGVVGGSDYCKIAEQLGDG 66 A ++ + L LFDVDGTLTPAR I E+ L+KLR +V IG VGGSD K EQLG Sbjct: 4 ANKQDPKTLVLFDVDGTLTPARLTISEEMKKTLEKLREKVVIGFVGGSDLSKQVEQLGPN 63 Query: 67 DEVIEKFDYVFAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYMALLRLPKKRG 126 V+ FDY F+ENG YK G+ L+ Q+ N +G E L+ F L Y++ + LP +RG Sbjct: 64 --VLNDFDYCFSENGLTAYKLGKELASQSFINWIGNEKYNKLVKFILRYLSDIDLPIRRG 121 Query: 127 TFIEFRNGMLNISPIGRSCTLEERIEFSELDKKEKIREKFVEALKTEFAGKGLRFSRGGM 186 TFIEFRNGM+N+SPIGR+ + +ER ++ + DK+ IRE VEALK EF GL +S GG Sbjct: 122 TFIEFRNGMINVSPIGRNASTQERNDYEKFDKQHHIRETMVEALKKEFPDFGLTYSIGGQ 181 Query: 187 ISFDVFPEGWDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDT 246 ISFDVFP GWDK YCL ++ + F+ IHFFG+++ GGND+EI+ DPRT+GH+V SP DT Sbjct: 182 ISFDVFPTGWDKTYCLQHVEDEHFENIHFFGDKSYKGGNDYEIYNDPRTIGHAVNSPDDT 241 Query: 247 VQRCREIF 254 ++ E F Sbjct: 242 IRILNETF 249 >3F9R-A nrPDB Length = 246 Score = 357 bits (915), Expect = 4e-99, Method: Composition-based stats. Identities = 115/243 (47%), Positives = 163/243 (67%), Gaps = 4/243 (1%) Query: 12 ERVLCLFDVDGTLTPARQKIDPEVAAFLQKLR-SRVQIGVVGGSDYCKIAEQLGDGDEVI 70 +RVL LFDVDGTLTP R E+ A +++ R + +G VGGSD+ K EQLG +V+ Sbjct: 3 KRVLLLFDVDGTLTPPRLCQTDEMRALIKRARGAGFCVGTVGGSDFAKQVEQLGR--DVL 60 Query: 71 EKFDYVFAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYMALLRLPKKRGTFIE 130 +FDYVFAENG + Y++G + +Q++ N LG + + + L +A L +P +RGTF+E Sbjct: 61 TQFDYVFAENGLLAYRNGLEIHRQSLLNALGNDRIVKFVKKTLRLIADLDIPVQRGTFVE 120 Query: 131 FRNGMLNISPIGRSCTLEERIEFSELDKKEKIREKFVEALKTEFAGKGLRFSRGGMISFD 190 +RNGM+N+SPIGR+C+ ER EF D + ++R + L+ F GL++S GG ISFD Sbjct: 121 YRNGMINVSPIGRNCSQAERDEFEVYDNEHRVRASLIAELENSFPDFGLKYSIGGQISFD 180 Query: 191 VFPEGWDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRC 250 VFP GWDK YCL ++ D F+ IHFFG++T GGND+EI+ D RT+GH V S +DT+ Sbjct: 181 VFPVGWDKTYCLQFVEDD-FEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTSYKDTIAEV 239 Query: 251 REI 253 +I Sbjct: 240 EKI 242 >2I55-A nrPDB Length = 247 Score = 353 bits (905), Expect = 6e-98, Method: Composition-based stats. Identities = 121/243 (49%), Positives = 163/243 (67%), Gaps = 4/243 (1%) Query: 13 RVLCLFDVDGTLTPARQKIDPEVAAFLQKLRS-RVQIGVVGGSDYCKIAEQLGDGDEVIE 71 + + LFDVDGTLTP R ++ L K R+ ++GVVGGSD+ K EQLG+ ++E Sbjct: 4 KAILLFDVDGTLTPPRNPETHDMKEALLKARAAGFKLGVVGGSDFAKQKEQLGES--ILE 61 Query: 72 KFDYVFAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYMALLRLPKKRGTFIEF 131 FDYVF+ENG + YK G+ + ++ LG E + + CL +A L +P +RGTF+EF Sbjct: 62 DFDYVFSENGLLAYKDGKEFHRNSLLRALGNEKVVAFVKKCLHLIADLDIPVQRGTFVEF 121 Query: 132 RNGMLNISPIGRSCTLEERIEFSELDKKEKIREKFVEALKTEFAGKGLRFSRGGMISFDV 191 RNGM N+SPIGR+C+ +ER EF LDK+ IREK + LK F L +S GG ISFDV Sbjct: 122 RNGMFNVSPIGRNCSQQERDEFENLDKERHIREKLIRELKEAFPDYQLAYSVGGQISFDV 181 Query: 192 FPEGWDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCR 251 FP+GWDK YCL ++ D F+TIHFFG++TS GGND+EIF D RT+GHSV + +DT+ Sbjct: 182 FPKGWDKTYCLQFVEND-FETIHFFGDKTSEGGNDYEIFTDSRTIGHSVKTYKDTIAILE 240 Query: 252 EIF 254 + Sbjct: 241 ALL 243 >4BND-A nrPDB Length = 253 Score = 250 bits (638), Expect = 4e-67, Method: Composition-based stats. Identities = 62/267 (23%), Positives = 113/267 (42%), Gaps = 32/267 (11%) Query: 11 KERVLCLFDVDGTLTPARQKIDPEVAAFLQKLRSRVQIGVVGGSDYCKIAEQLGDGDEVI 70 K + + FD+D TL + I PE+A L L + I + G Y + Q+ + Sbjct: 1 KMKKILSFDIDNTLNEPKMPIFPEMAELLATLSQKYIIAPISGQKYDQFLIQIINNLPES 60 Query: 71 EKFD--YVFAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYMALLRLPKKRGTF 128 D ++F GT Y H KQ L +E ++ AL + K+ G + Sbjct: 61 ANLDNFHLFVAQGTQYYAHKAGEWKQVFNYALTDEQANAIMG------ALEKAAKELGHW 114 Query: 129 -----------IEFRNGMLNISPIGRSCTLEERIEF-SELDKKEKIREKFVEALKTEFAG 176 E R M+ S IG+ +E + + ++ K+ +I + L +++A Sbjct: 115 DESVLLPGDEINENRESMIAYSAIGQKAGVEAKQAWDPDMTKRNEIAK-----LASQYAP 169 Query: 177 KGLRFSRGGMISFDVFPEGWDKRYCLDSLDQD---SFDTIHFFGNETSPGGNDFEIFA-D 232 + F G + + F G +K + ++ L ++ + + I +FG+ T PGGND+ + Sbjct: 170 E-FEFEVAGTTTINGFVPGQNKEFGMNHLMEELNVTKEEILYFGDMTQPGGNDYPVVQMG 228 Query: 233 PRTVGHSVVSPQDTVQRCREIFFPETA 259 T+ +V ++T + I E A Sbjct: 229 IETI--TVRDWKETAAILKAIIAMEEA 253 >1RLT-A nrPDB Length = 271 Score = 35.8 bits (81), Expect = 0.020, Method: Composition-based stats. Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 6/99 (6%) Query: 14 VLCLFDVDGT-LTPARQKIDPEVAAFLQKLRSR-VQIGVVGGSDYCKIAEQLGDGDEVIE 71 + + D+DGT L A+ P A Q+L+ R ++ V G+ Y QL ++ Sbjct: 4 KVIVTDMDGTFLNDAKTYNQPRFMAQYQELKKRGIKFVVASGNQY----YQLISFFPELK 59 Query: 72 KFDYVFAENGTVQYKHGRLLSKQTIQNHLGEELLQDLIN 110 AENG + Y+HG+ L + H ++ +L+ Sbjct: 60 DEISFVAENGALVYEHGKQLFHGELTRHESRIVIGELLK 98 >5GVX-A nrPDB Length = 430 Score = 33.1 bits (74), Expect = 0.12, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 5/54 (9%) Query: 16 CLFDVDGTLT-----PARQKIDPEVAAFLQKLRSRVQIGVVGGSDYCKIAEQLG 64 FD DGTL+ P + P LQKL +R I V+ G D + +++G Sbjct: 183 VFFDFDGTLSDIVEDPDAAWLAPGALEALQKLAARCPIAVLSGRDLADVTQRVG 236 >1RKQ-A nrPDB Length = 282 Score = 33.1 bits (74), Expect = 0.12, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 34/88 (38%), Gaps = 4/88 (4%) Query: 14 VLCLFDVDGTLTPARQKIDPEVAAFLQKLRSR-VQIGVVGGSDYCKIAEQLGDGDEVIEK 72 L D+DGTL I P V + R+R V + + G Y + L + + Sbjct: 6 KLIAIDMDGTLLLPDHTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYL-KELHMEQP 64 Query: 73 FDYVFAENGTVQYK--HGRLLSKQTIQN 98 DY NG + K G +++ + Sbjct: 65 GDYCITYNGALVQKAADGSTVAQTALSY 92 >3FCE-A nrPDB Length = 512 Score = 32.3 bits (72), Expect = 0.24, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 62/181 (34%), Gaps = 19/181 (10%) Query: 15 LCLFDVDGTLTPARQKIDPEVAAFLQKLRSRVQIGVVGGSDYCKIAEQLGDGDEVIEKFD 74 L + DGT+ P D E + + V +G +G + + A + DG+ + D Sbjct: 330 LLIMKEDGTIAP-----DGEKGEIVI-VGPSVSVGYLGSPELTEKAFTMIDGERAYKTGD 383 Query: 75 YVFAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYMALLRLPKKRGTFIEFRNG 134 + ENG + Y + + E ++ + C + +P K+G E + Sbjct: 384 AGYVENGLLFYNGRLDFQIKLHGYRMELEEIEHHLRACSYVEGAVIVPIKKG---EKYDY 440 Query: 135 MLNISPIGRSCTLEERIEFSELDKKEKIREKFVEALKTEFAGKGLRFSRGGMISFDVFPE 194 +L + G +K+ K+ + L + S + P Sbjct: 441 LLAVVVPGEHS----------FEKEFKLTSAIKKELNERLPNYMIPRKFMYQSSIPMTPN 490 Query: 195 G 195 G Sbjct: 491 G 491 >6JR6-A nrPDB Length = 838 Score = 31.6 bits (70), Expect = 0.35, Method: Composition-based stats. Identities = 22/128 (17%), Positives = 43/128 (33%), Gaps = 9/128 (7%) Query: 82 TVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYMALLRLPKKRGTFIEFRNGMLNISPI 141 ++Y + + K Q +G+ELL + + + LP+ G +I+F N Sbjct: 609 LLEYPNDKETFKLNGQFLVGKELLVAPVVEQGAVTKDVYLPE--GEWIDFNNCKTKYKGE 666 Query: 142 GRSCTLEERIEFSELDKKEKIREKFVEALKTEFAGKGLRFSRGGMISFDVFPEGWDKRYC 201 KK I + ++ + + +FD+FP +K Sbjct: 667 QWITVDAPLNTIPVFVKKGSIIPQMPVM---QYIDEKKVYPV----TFDIFPGNLNKETS 719 Query: 202 LDSLDQDS 209 + D Sbjct: 720 FTFYEDDG 727 >5DXI-A nrPDB Length = 302 Score = 30.8 bits (68), Expect = 0.60, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 7/64 (10%) Query: 9 RRKERVLCLFDVDGTLTP----ARQKI-DPEVAAFLQKLRS--RVQIGVVGGSDYCKIAE 61 + +R L LFD DGTLTP I ++ L L S + QI ++ G D + + Sbjct: 18 KESQRRLFLFDYDGTLTPIVQDPAAAIPSDKLNRILDVLSSDPKNQIWIISGRDQAFLEK 77 Query: 62 QLGD 65 +G+ Sbjct: 78 WMGN 81 >2BOF-X nrPDB Length = 286 Score = 30.0 bits (66), Expect = 0.96, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 25/61 (40%), Gaps = 4/61 (6%) Query: 201 CLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSV-VSPQDTVQRCREIFFPETA 259 C+ + Q+ +T+ + G G + I+ D GHS SP ++ +A Sbjct: 125 CMQHVQQEVLETMAYAGKALKAGSSQARIYFDA---GHSAWHSPAQMASWLQQADISNSA 181 Query: 260 H 260 H Sbjct: 182 H 182 >5DXN-A nrPDB Length = 286 Score = 29.3 bits (64), Expect = 1.6, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 8/80 (10%) Query: 9 RRKERVLCLFDVDGTLTP----ARQKI-DPEVAAFLQKLRS--RVQIGVVGGSDYCKIAE 61 R+ + L +FD DGTLTP + I V L+ L + R + ++ G D + E Sbjct: 16 RKARKRLFMFDYDGTLTPIVKDPQAAIPSDRVLRTLKTLAADPRNAVWIISGRDQAFLDE 75 Query: 62 QLGDGDEVIEKFDY-VFAEN 80 +G E+ ++ F Sbjct: 76 WMGHIPELGLSAEHGCFIRQ 95 >3D2D-A nrPDB Length = 538 Score = 29.3 bits (64), Expect = 1.7, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 33/81 (40%), Gaps = 5/81 (6%) Query: 40 QKLRSRVQIGVVGGSDYCKIAEQL-----GDGDEVIEKFDYVFAENGTVQYKHGRLLSKQ 94 ++L + V+GG+D ++ + G FD +F E G V+ + + + Sbjct: 271 EELEEDFTLSVLGGADEKQVWLTMLGFHFGLKTVAKSTFDLLFPELGLVEEDYLEMSWGE 330 Query: 95 TIQNHLGEELLQDLINFCLSY 115 + G E + L N L + Sbjct: 331 SFAYLAGLETVSQLNNRFLKF 351 >3OR2-B nrPDB Length = 385 Score = 28.9 bits (63), Expect = 2.2, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 16/77 (20%) Query: 150 RIEFSELDKKEKIREKFVEALKT-EFAGKGLRFSRGGM---ISFDVFPEGWDKRYC---- 201 R + E+ + V LKT +FA +F GG IS V +GW YC Sbjct: 97 RNNIEFMVDNEETLKALVADLKTRKFAAGSFKFPIGGTGASISNIVHTQGW--VYCHTPA 154 Query: 202 ------LDSLDQDSFDT 212 + ++ + F+ Sbjct: 155 TDASGPVKAVMDELFEE 171 >2GXQ-A nrPDB Length = 207 Score = 28.9 bits (63), Expect = 2.2, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 24/66 (36%), Gaps = 7/66 (10%) Query: 5 AQAARRKERVLCLFDVDGTLTPARQKIDPEVAAFLQKLRSRVQIGVVGGSDYCKIAEQLG 64 +Q RK R L LTP R+ + + V GG+ Y K E L Sbjct: 66 SQERGRKPRALV-------LTPTRELALQVASELTAVAPHLKVVAVYGGTGYGKQKEALL 118 Query: 65 DGDEVI 70 G + + Sbjct: 119 RGADAV 124 >4KBG-A nrPDB Length = 365 Score = 28.9 bits (63), Expect = 2.3, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 24/66 (36%), Gaps = 7/66 (10%) Query: 5 AQAARRKERVLCLFDVDGTLTPARQKIDPEVAAFLQKLRSRVQIGVVGGSDYCKIAEQLG 64 +Q RK R L LTP R+ + + V GG+ Y K E L Sbjct: 66 SQERGRKPRALV-------LTPTRELALQVASELTAVAPHLKVVAVYGGTGYGKQKEALL 118 Query: 65 DGDEVI 70 G + + Sbjct: 119 RGADAV 124 >3KBB-A nrPDB Length = 216 Score = 28.9 bits (63), Expect = 2.6, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 34/90 (37%), Gaps = 5/90 (5%) Query: 146 TLEERIEFSELDKK-EKIREKFVEALKTEFAG--KGLRFSRGGMISFDVFPEGWDKRYC- 201 LE + K+ + +++ L E G + L F + I + + Sbjct: 57 ALEIKDSLENFKKRVHEEKKRVFSELLKENPGVREALEFVKSKRIKLALATSTPQREALE 116 Query: 202 -LDSLDQDSFDTIHFFGNETSPGGNDFEIF 230 L LD + + + FG++ G D EI+ Sbjct: 117 RLRRLDLEKYFDVMVFGDQVKNGKPDPEIY 146 >4QAX-A nrPDB Length = 513 Score = 28.5 bits (62), Expect = 3.0, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 45/124 (36%), Gaps = 9/124 (7%) Query: 128 FIEFRNGMLNISPIGRSCTLEERIEFSELDKKEKIREKFVEALKTEFAGKGLRFSRGGMI 187 +IE N IG+ ++ R + DK+ + EK A++ A G Sbjct: 171 YIEETEAKFNELGIGQFASVSGRYYAMDRDKRWEREEKAYNAIRNFDAPTYATAKEGVEA 230 Query: 188 SFDVFPEGWDKRYCLDSLDQ------DSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV 241 S++ EG + + + + + D + F+ EIFA+ G V Sbjct: 231 SYN---EGLTDEFVVPFIVENQNDGVNDGDAVIFYNFRPDRAAQLSEIFANRAFEGFKVE 287 Query: 242 SPQD 245 +D Sbjct: 288 QVKD 291 >6DX0-A nrPDB Length = 517 Score = 28.5 bits (62), Expect = 3.1, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 20/41 (48%) Query: 99 HLGEELLQDLINFCLSYMALLRLPKKRGTFIEFRNGMLNIS 139 H+ +E + + FCLS M L L + +F E LN S Sbjct: 366 HMQQEKVAQIKEFCLSKMEDLELINRMSSFNELSATQLNQS 406 >4USZ-A nrPDB Length = 458 Score = 27.3 bits (59), Expect = 6.8, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 39/93 (41%), Gaps = 4/93 (4%) Query: 162 IREKFVEALKTEFAGKGLRFSRGGMISFDVFPEGWDKRYCLDSLDQDSFDTIHFFGNETS 221 I + ++FA +++ + D F WD++Y + + ++ H +++ Sbjct: 295 IAKIAARKTNSDFAKTLFAYTKASVAMADAFISCWDEKYRSNLIRPETVINQHI--DDSW 352 Query: 222 PGGNDFEIFADPRTVGHSVVSPQDTVQRCREIF 254 F + T GHSVVS +V E+F Sbjct: 353 KPVLQTPPFPE-YTSGHSVVSGAASV-VLTEVF 383 >5H02-A nrPDB Length = 283 Score = 27.3 bits (59), Expect = 7.1, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 23/63 (36%), Gaps = 2/63 (3%) Query: 168 EALKTEFAGKGLRFSRGGMISFDVFPEGWDKRYCLDSLDQDSFDTIHFFGNETSPGGNDF 227 E + A FS G + + ++FP K Y L + F I+ G+ D Sbjct: 215 EHVDEGLARFKYEFSDGSVYNLNMFPL--RKDYTRQLLHEVGFQEINTLGDFKETYKEDE 272 Query: 228 EIF 230 F Sbjct: 273 PDF 275 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.312 0.133 0.354 Lambda K H 0.267 0.0408 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9,845,040 Number of Sequences: 36641 Number of extensions: 393348 Number of successful extensions: 1126 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 20 Number of HSP's successfully gapped in prelim test: 29 Number of HSP's that attempted gapping in prelim test: 1083 Number of HSP's gapped (non-prelim): 50 length of query: 262 length of database: 10,336,785 effective HSP length: 95 effective length of query: 167 effective length of database: 6,855,890 effective search space: 1144933630 effective search space used: 1144933630 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 58 (27.0 bits)