BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q92820 (318 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 1L9X-A nrPDB 616 e-177 4L8Y-C nrPDB 344 3e-95 2LXN-A nrPDB 45 6e-05 3FIJ-A nrPDB 39 0.002 4WIN-A nrPDB 36 0.022 4WIM-A nrPDB 35 0.046 1QDL-B nrPDB 33 0.11 1WL8-A nrPDB 30 1.8 5OO6-B nrPDB 29 2.8 6D0Y-A nrPDB 29 3.0 4XYI-A nrPDB 28 3.6 4XPS-A nrPDB 28 5.1 1H6K-X nrPDB 28 5.3 5WJC-A nrPDB 28 6.9 >1L9X-A nrPDB Length = 315 Score = 616 bits (1588), Expect = e-177, Method: Compositional matrix adjust. Identities = 294/294 (100%), Positives = 294/294 (100%) Query: 25 RPHGDTAKKPIIGILMQKCRNKVMKNYGRYYIAASYVKYLESAGARVVPVRLDLTEKDYE 84 RPHGDTAKKPIIGILMQKCRNKVMKNYGRYYIAASYVKYLESAGARVVPVRLDLTEKDYE Sbjct: 22 RPHGDTAKKPIIGILMQKCRNKVMKNYGRYYIAASYVKYLESAGARVVPVRLDLTEKDYE 81 Query: 85 ILFKSINGILFPGGSVDLRRSDYAKVAKIFYNLSIQSFDDGDYFPVWGTCLGFEELSLLI 144 ILFKSINGILFPGGSVDLRRSDYAKVAKIFYNLSIQSFDDGDYFPVWGTCLGFEELSLLI Sbjct: 82 ILFKSINGILFPGGSVDLRRSDYAKVAKIFYNLSIQSFDDGDYFPVWGTCLGFEELSLLI 141 Query: 145 SGECLLTATDTVDVAMPLNFTGGQLHSRMFQNFPTELLLSLAVEPLTANFHKWSLSVKNF 204 SGECLLTATDTVDVAMPLNFTGGQLHSRMFQNFPTELLLSLAVEPLTANFHKWSLSVKNF Sbjct: 142 SGECLLTATDTVDVAMPLNFTGGQLHSRMFQNFPTELLLSLAVEPLTANFHKWSLSVKNF 201 Query: 205 TMNEKLKKFFNVLTTNTDGKIEFISTMEGYKYPVYGVQWHPEKAPYEWKNLDGISHAPNA 264 TMNEKLKKFFNVLTTNTDGKIEFISTMEGYKYPVYGVQWHPEKAPYEWKNLDGISHAPNA Sbjct: 202 TMNEKLKKFFNVLTTNTDGKIEFISTMEGYKYPVYGVQWHPEKAPYEWKNLDGISHAPNA 261 Query: 265 VKTAFYLAEFFVNEARKNNHHFKSESEEEKALIYQFSPIYTGNISSFQQCYIFD 318 VKTAFYLAEFFVNEARKNNHHFKSESEEEKALIYQFSPIYTGNISSFQQCYIFD Sbjct: 262 VKTAFYLAEFFVNEARKNNHHFKSESEEEKALIYQFSPIYTGNISSFQQCYIFD 315 >4L8Y-C nrPDB Length = 312 Score = 344 bits (882), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 173/312 (55%), Positives = 220/312 (70%), Gaps = 5/312 (1%) Query: 7 LLCVLGLLLCGAASLELSRPHGDTAKKPIIGILMQKCRNKVMKNYGRYYIAASYVKYLES 66 LLC+ + A S+ P T ++PIIG+L Q + K YIAASYVK+LES Sbjct: 6 LLCLF--TVANAVSIYNFGPLIKTNERPIIGVLAQDVFDP--KPDRNSYIAASYVKFLES 61 Query: 67 AGARVVPVRLDLTEKDYEILFKSINGILFPGGSVDLRRSDYAKVAKIFYNLSIQSFDDGD 126 AGARVVPV ++ +E +Y LFKSING+LFPGG V L S Y+K A IFY L++++ +GD Sbjct: 62 AGARVVPVMINKSEDEYSRLFKSINGVLFPGGGVSLESSGYSKAAGIFYRLALEANSNGD 121 Query: 127 YFPVWGTCLGFEELSLLISGECLLTATDTVDVAMPLNFTGGQLHSRMFQNFPTELLLSLA 186 YFPVWGT LGFE L+LL SGE LL+ T+T +A+PL+FT SR+F+ FP EL+ SLA Sbjct: 122 YFPVWGTALGFELLTLLTSGELLLSHTNTSGIALPLDFTEDVKGSRLFKEFPEELMKSLA 181 Query: 187 VEPLTANFHKWSLSVKNFTMNEKLKKFFNVLTTNTDGKIEFISTMEGYKYPVYGVQWHPE 246 EPLT N H+WS++ +NFT N+KLKKF+ VL+TNTDG +F+STME Y +P+Y QWHPE Sbjct: 182 TEPLTENSHQWSITTENFTANKKLKKFYRVLSTNTDGYNKFVSTMEAYDFPIYATQWHPE 241 Query: 247 KAPYEWKNLDGISHAPNAVKTAFYLAEFFVNEARKNNHHFKSESEEEKALIYQFSPIYTG 306 K +EW I H P+A+KT FY+A FFVNEARKN H F S EEEKALIY + P YTG Sbjct: 242 KNAFEWTR-PYIPHTPSAIKTTFYMANFFVNEARKNLHSFASTEEEEKALIYNYKPEYTG 300 Query: 307 NISSFQQCYIFD 318 S+F+Q Y F+ Sbjct: 301 IQSAFEQTYFFN 312 >2LXN-A nrPDB Length = 188 Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 50/209 (23%), Positives = 96/209 (45%), Gaps = 40/209 (19%) Query: 47 VMKNYGRY-YIAASYVKYLESAGARVVPVRLDLTEKDYEILFKSINGILFPGGSVDLRRS 105 ++ N G+Y + +KY+ +++VP L E + K + GI+ GG D+ + Sbjct: 4 ILDNGGQYVHRIHRSLKYI-GVSSKIVPNTTPLEEIESN---KEVKGIILSGGP-DIEK- 57 Query: 106 DYAKVAKIFYNLSIQSFDDGDYFPVWGTCLGFEELSLLISGECLLTATDTVDVAMPLNFT 165 AK ++++ + P+ G CLG + ++L GE + + + A+ + Sbjct: 58 -----AKNCIDIALNA-----KLPILGICLGHQLIALAYGGE--VGRAEAEEYALTKVYV 105 Query: 166 GGQLHSRMFQNFPTELLLSLAVEPLTANFHKWSLSVKNFTMNEKLKKFFNVLTTNTDGKI 225 + + +F+N P E F+ W+ S K+ +K+ + F +L + ++ Sbjct: 106 DKE--NDLFKNVPRE-------------FNAWA-SHKDEV--KKVPEGFEILAHSDICQV 147 Query: 226 EFISTMEGYKYPVYGVQWHPEKAPYEWKN 254 E M+ P+YGVQ+HPE A E+ N Sbjct: 148 E---AMKHKTKPIYGVQFHPEVAHTEYGN 173 >3FIJ-A nrPDB Length = 254 Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust. Identities = 58/233 (24%), Positives = 91/233 (39%), Gaps = 35/233 (15%) Query: 33 KPIIGILMQKCRNKVMKNYGRY--YIAASYVKYLESAGARVVPVRLDLTEKDYEILFKS- 89 KP+IGI + V YG Y YV ++ G P+ L + + + S Sbjct: 4 KPVIGITGNRLVKGVDVFYGHRVTYTQQRYVDAIQKVGG--FPIALPIDDPSTAVQAISL 61 Query: 90 INGILFPGGSVDLRRSDY-----AKVAKIF-----YNLSI--QSFDDGDYFPVWGTCLGF 137 ++G+L GG D+ Y ++ F Y +++ + D G P++ C G Sbjct: 62 VDGLLLTGGQ-DITPQLYLEEPSQEIGAYFPPRDSYEIALVRAALDAGK--PIFAICRGM 118 Query: 138 EELSLLISGECLLTATDTVDVAMP-LNFTGGQLHSRMFQNFPT-ELLLSLAVEPLTANFH 195 + +++ + G + A+ L QL S PT EL + L + H Sbjct: 119 QLVNVALGGTLYQDISQVETKALQHLQRVDEQLGSHTIDIEPTSELAKHHPNKKLVNSLH 178 Query: 196 KWSLSVKNFTMNEKLKKFFNVLTTNTDGKIEFISTMEGYKYPVY--GVQWHPE 246 + +KL F V DG IE + EG P + GVQWHPE Sbjct: 179 HQFI--------KKLAPSFKVTARTADGMIEAV---EGDNLPSWYLGVQWHPE 220 >4WIN-A nrPDB Length = 249 Score = 35.8 bits (81), Expect = 0.022, Method: Compositional matrix adjust. Identities = 42/213 (19%), Positives = 91/213 (42%), Gaps = 29/213 (13%) Query: 62 KYLESAGARVVPVRLDLTEKDYEILFK-----SINGILFPGGSVDLRRSDYAKVAKIFYN 116 +Y R+ +++ KDY + K +I G++ GG + + + K + Sbjct: 29 QYFHLIVKRLNNIKIFSETKDYGVELKDIKDMNIKGVILSGGPYSVTEAGSPHLKKEVFE 88 Query: 117 LSIQSFDDGDYFPVWGTCLGFEELSLLISGECLLTATD---TVDVAMPLNFTGGQL-HSR 172 ++ P++G C G +E+++ ++GE + T DV + N + + R Sbjct: 89 YFLEK-----KIPIFGICYGMQEIAVQMNGEVKKSKTSEYGCTDVNILRNDNINNITYCR 143 Query: 173 MFQNFPTELLLSLAVEPLTAN---FHKWSLSVKNFTMNE-----KLKKFFNVLTTNTDGK 224 F + + + L + + F + MN K+ + F +++++ + Sbjct: 144 NFGDSSSAMDLYSNYKLMNETCCLFENIKSDITTVWMNHNDEVTKIPENFYLVSSSENC- 202 Query: 225 IEFISTMEGYKYPVYGVQWHPEKAPYEWKNLDG 257 I ++ +Y +YGVQ+HPE +++LDG Sbjct: 203 --LICSIYNKEYNIYGVQYHPEV----YESLDG 229 >4WIM-A nrPDB Length = 568 Score = 35.0 bits (79), Expect = 0.046, Method: Compositional matrix adjust. Identities = 42/213 (19%), Positives = 91/213 (42%), Gaps = 29/213 (13%) Query: 62 KYLESAGARVVPVRLDLTEKDYEILFK-----SINGILFPGGSVDLRRSDYAKVAKIFYN 116 +Y R+ +++ KDY + K +I G++ GG + + + K + Sbjct: 30 QYFHLIVKRLNNIKIFSETKDYGVELKDIKDMNIKGVILSGGPYSVTEAGSPHLKKEVFE 89 Query: 117 LSIQSFDDGDYFPVWGTCLGFEELSLLISGECLLTATDT---VDVAMPLNFTGGQL-HSR 172 ++ P++G C G +E+++ ++GE + T DV + N + + R Sbjct: 90 YFLEK-----KIPIFGICYGMQEIAVQMNGEVKKSKTSEYGCTDVNILRNDNINNITYCR 144 Query: 173 MFQNFPTELLLSLAVEPLTAN---FHKWSLSVKNFTMNE-----KLKKFFNVLTTNTDGK 224 F + + + L + + F + MN K+ + F +++++ + Sbjct: 145 NFGDSSSAMDLYSNYKLMNETCCLFENIKSDITTVWMNHNDEVTKIPENFYLVSSSENC- 203 Query: 225 IEFISTMEGYKYPVYGVQWHPEKAPYEWKNLDG 257 I ++ +Y +YGVQ+HPE +++LDG Sbjct: 204 --LICSIYNKEYNIYGVQYHPEV----YESLDG 230 >1QDL-B nrPDB Length = 195 Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust. Identities = 36/154 (23%), Positives = 55/154 (35%), Gaps = 26/154 (16%) Query: 93 ILFPGGSVDLRRSDYAKVAKIFYNLSIQSFDDGDYFPVWGTCLGFEELSLLISGECLLTA 152 I+ PG +R D + L G P+ G CLG + + G + A Sbjct: 50 IISPGPGTPEKREDIGVSLDVIKYL-------GKRTPILGVCLGHQAIGYAF-GAKIRRA 101 Query: 153 TDTVDVAMPLNFTGGQLHSRMFQNFPTELLLSLAVEPLTANFHKWSLSVKNFTMNEKLKK 212 F G + + N P L +A E +H + ++E + Sbjct: 102 RKV--------FHGKISNIILVNNSPLSLYYGIAKEFKATRYH-------SLVVDEVHRP 146 Query: 213 FFNVLTTNTDGKIEFISTMEGYKYPVYGVQWHPE 246 + D +I I E YP+YGVQ+HPE Sbjct: 147 LIVDAISAEDNEIMAIHHEE---YPIYGVQFHPE 177 >1WL8-A nrPDB Length = 189 Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust. Identities = 46/208 (22%), Positives = 81/208 (38%), Gaps = 42/208 (20%) Query: 47 VMKNYGRY-YIAASYVKYLESAGARVVPVRLDLTEKDYEILFKSIN--GILFPGGSVDLR 103 +M N G+Y + ++YL +++P L E K++N GI+F GG Sbjct: 5 IMDNGGQYVHRIWRTLRYL-GVETKIIPNTTPLEE------IKAMNPKGIIFSGGPSLEN 57 Query: 104 RSDYAKVAKIFYNLSIQSFDDGDYFPVWGTCLGFEELSLLISGECLLTATDTVDVAMPLN 163 + KV ++ +D+ + P+ G CLG + ++ G+ L Sbjct: 58 TGNCEKV--------LEHYDEFN-VPILGICLGHQLIAKFFGGK----VGRGEKAEYSLV 104 Query: 164 FTGGQLHSRMFQNFPTELLLSLAVEPLTANFHKWSLSVKNFTMNEKLKKFFNVLTTNTDG 223 + +F+ P L + W + ++L F +L + Sbjct: 105 EIEIIDENEIFKGLPKRLKV-------------WESHMDEV---KELPPKFKILARSETC 148 Query: 224 KIEFISTMEGYKYPVYGVQWHPEKAPYE 251 IE M+ + P+YGVQ+HPE A E Sbjct: 149 PIE---AMKHEELPIYGVQFHPEVAHTE 173 >5OO6-B nrPDB Length = 158 Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust. Identities = 10/38 (26%), Positives = 25/38 (65%) Query: 272 AEFFVNEARKNNHHFKSESEEEKALIYQFSPIYTGNIS 309 ++ +V ++ + HF+ ++EE++ L+ + +Y GN+S Sbjct: 13 SDSYVELSQYRDQHFRGDNEEQEKLLKKSCTLYVGNLS 50 >6D0Y-A nrPDB Length = 176 Score = 28.9 bits (63), Expect = 3.0, Method: Compositional matrix adjust. Identities = 10/38 (26%), Positives = 25/38 (65%) Query: 272 AEFFVNEARKNNHHFKSESEEEKALIYQFSPIYTGNIS 309 ++ +V ++ + HF+ ++EE++ L+ + +Y GN+S Sbjct: 31 SDSYVELSQYRDQHFRGDNEEQEKLLKKSCTLYVGNLS 68 >4XYI-A nrPDB Length = 430 Score = 28.5 bits (62), Expect = 3.6, Method: Compositional matrix adjust. Identities = 10/22 (45%), Positives = 14/22 (63%) Query: 228 ISTMEGYKYPVYGVQWHPEKAP 249 + T+EG++ VY VQW P P Sbjct: 318 LHTLEGHEDEVYNVQWSPHDEP 339 >4XPS-A nrPDB Length = 720 Score = 28.1 bits (61), Expect = 5.1, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 9/56 (16%) Query: 187 VEPLTANFHKWSLSVKNFTMNEKLKKFFNVLTTNTDGKIEF------ISTMEGYKY 236 ++P T + W V +FTM E K FFN L + +IE I+ ++GY Y Sbjct: 321 IKPYTGSHTVWLGLVPDFTMAEARKPFFNQLLKD---QIERGVSGYKIAEVDGYDY 373 >1H6K-X nrPDB Length = 98 Score = 28.1 bits (61), Expect = 5.3, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 20/29 (68%) Query: 283 NHHFKSESEEEKALIYQFSPIYTGNISSF 311 + HF+ ++EE++ L+ + +Y GN+S + Sbjct: 1 DQHFRGDNEEQEKLLKKSCTLYVGNLSFY 29 >5WJC-A nrPDB Length = 430 Score = 27.7 bits (60), Expect = 6.9, Method: Compositional matrix adjust. Identities = 9/22 (40%), Positives = 15/22 (68%) Query: 228 ISTMEGYKYPVYGVQWHPEKAP 249 + T+EG++ VYG++W P P Sbjct: 318 LHTLEGHEDEVYGLEWSPHDEP 339 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 1L9X-A nrPDB 493 e-140 4L8Y-C nrPDB 473 e-134 2LXN-A nrPDB 203 6e-53 Sequences not found previously or not previously below threshold: 1WL8-A nrPDB 109 2e-24 2A9V-A nrPDB 79 2e-15 4WIM-A nrPDB 68 5e-12 4WIN-A nrPDB 67 8e-12 5TW7-A nrPDB 67 1e-11 3FIJ-A nrPDB 61 9e-10 3TQI-A nrPDB 54 7e-08 1QDL-B nrPDB 51 6e-07 2YWB-A nrPDB 51 7e-07 1GPM-A nrPDB 51 1e-06 2VXO-A nrPDB 44 9e-05 2VPI-A nrPDB 44 9e-05 1C30-B nrPDB 42 2e-04 1O1Y-A nrPDB 36 0.030 2VKT-A nrPDB 34 0.082 4ZDJ-A nrPDB 34 0.12 1NJJ-A nrPDB 33 0.19 1I7S-B nrPDB 32 0.34 4GUD-A nrPDB 32 0.44 1VCN-A nrPDB 30 1.00 4ADS-G nrPDB 30 1.7 4NZF-A nrPDB 30 1.7 3M3P-A nrPDB 29 2.1 4ZGV-A nrPDB 29 2.1 1EBF-A nrPDB 29 3.3 4NMY-A nrPDB 28 5.9 4V0R-A nrPDB 27 8.4 4C11-A nrPDB 27 8.4 >1L9X-A nrPDB Length = 315 Score = 493 bits (1269), Expect = e-140, Method: Composition-based stats. Identities = 294/294 (100%), Positives = 294/294 (100%) Query: 25 RPHGDTAKKPIIGILMQKCRNKVMKNYGRYYIAASYVKYLESAGARVVPVRLDLTEKDYE 84 RPHGDTAKKPIIGILMQKCRNKVMKNYGRYYIAASYVKYLESAGARVVPVRLDLTEKDYE Sbjct: 22 RPHGDTAKKPIIGILMQKCRNKVMKNYGRYYIAASYVKYLESAGARVVPVRLDLTEKDYE 81 Query: 85 ILFKSINGILFPGGSVDLRRSDYAKVAKIFYNLSIQSFDDGDYFPVWGTCLGFEELSLLI 144 ILFKSINGILFPGGSVDLRRSDYAKVAKIFYNLSIQSFDDGDYFPVWGTCLGFEELSLLI Sbjct: 82 ILFKSINGILFPGGSVDLRRSDYAKVAKIFYNLSIQSFDDGDYFPVWGTCLGFEELSLLI 141 Query: 145 SGECLLTATDTVDVAMPLNFTGGQLHSRMFQNFPTELLLSLAVEPLTANFHKWSLSVKNF 204 SGECLLTATDTVDVAMPLNFTGGQLHSRMFQNFPTELLLSLAVEPLTANFHKWSLSVKNF Sbjct: 142 SGECLLTATDTVDVAMPLNFTGGQLHSRMFQNFPTELLLSLAVEPLTANFHKWSLSVKNF 201 Query: 205 TMNEKLKKFFNVLTTNTDGKIEFISTMEGYKYPVYGVQWHPEKAPYEWKNLDGISHAPNA 264 TMNEKLKKFFNVLTTNTDGKIEFISTMEGYKYPVYGVQWHPEKAPYEWKNLDGISHAPNA Sbjct: 202 TMNEKLKKFFNVLTTNTDGKIEFISTMEGYKYPVYGVQWHPEKAPYEWKNLDGISHAPNA 261 Query: 265 VKTAFYLAEFFVNEARKNNHHFKSESEEEKALIYQFSPIYTGNISSFQQCYIFD 318 VKTAFYLAEFFVNEARKNNHHFKSESEEEKALIYQFSPIYTGNISSFQQCYIFD Sbjct: 262 VKTAFYLAEFFVNEARKNNHHFKSESEEEKALIYQFSPIYTGNISSFQQCYIFD 315 >4L8Y-C nrPDB Length = 312 Score = 473 bits (1216), Expect = e-134, Method: Composition-based stats. Identities = 173/312 (55%), Positives = 220/312 (70%), Gaps = 5/312 (1%) Query: 7 LLCVLGLLLCGAASLELSRPHGDTAKKPIIGILMQKCRNKVMKNYGRYYIAASYVKYLES 66 LLC+ + A S+ P T ++PIIG+L Q + K YIAASYVK+LES Sbjct: 6 LLCLF--TVANAVSIYNFGPLIKTNERPIIGVLAQDVFDP--KPDRNSYIAASYVKFLES 61 Query: 67 AGARVVPVRLDLTEKDYEILFKSINGILFPGGSVDLRRSDYAKVAKIFYNLSIQSFDDGD 126 AGARVVPV ++ +E +Y LFKSING+LFPGG V L S Y+K A IFY L++++ +GD Sbjct: 62 AGARVVPVMINKSEDEYSRLFKSINGVLFPGGGVSLESSGYSKAAGIFYRLALEANSNGD 121 Query: 127 YFPVWGTCLGFEELSLLISGECLLTATDTVDVAMPLNFTGGQLHSRMFQNFPTELLLSLA 186 YFPVWGT LGFE L+LL SGE LL+ T+T +A+PL+FT SR+F+ FP EL+ SLA Sbjct: 122 YFPVWGTALGFELLTLLTSGELLLSHTNTSGIALPLDFTEDVKGSRLFKEFPEELMKSLA 181 Query: 187 VEPLTANFHKWSLSVKNFTMNEKLKKFFNVLTTNTDGKIEFISTMEGYKYPVYGVQWHPE 246 EPLT N H+WS++ +NFT N+KLKKF+ VL+TNTDG +F+STME Y +P+Y QWHPE Sbjct: 182 TEPLTENSHQWSITTENFTANKKLKKFYRVLSTNTDGYNKFVSTMEAYDFPIYATQWHPE 241 Query: 247 KAPYEWKNLDGISHAPNAVKTAFYLAEFFVNEARKNNHHFKSESEEEKALIYQFSPIYTG 306 K +EW I H P+A+KT FY+A FFVNEARKN H F S EEEKALIY + P YTG Sbjct: 242 KNAFEWTR-PYIPHTPSAIKTTFYMANFFVNEARKNLHSFASTEEEEKALIYNYKPEYTG 300 Query: 307 NISSFQQCYIFD 318 S+F+Q Y F+ Sbjct: 301 IQSAFEQTYFFN 312 >2LXN-A nrPDB Length = 188 Score = 203 bits (517), Expect = 6e-53, Method: Composition-based stats. Identities = 50/209 (23%), Positives = 96/209 (45%), Gaps = 40/209 (19%) Query: 47 VMKNYGRY-YIAASYVKYLESAGARVVPVRLDLTEKDYEILFKSINGILFPGGSVDLRRS 105 ++ N G+Y + +KY+ +++VP L E + K + GI+ GG D+ + Sbjct: 4 ILDNGGQYVHRIHRSLKYI-GVSSKIVPNTTPLEEIESN---KEVKGIILSGGP-DIEK- 57 Query: 106 DYAKVAKIFYNLSIQSFDDGDYFPVWGTCLGFEELSLLISGECLLTATDTVDVAMPLNFT 165 AK ++++ + P+ G CLG + ++L GE + + + A+ + Sbjct: 58 -----AKNCIDIALNA-----KLPILGICLGHQLIALAYGGE--VGRAEAEEYALTKVYV 105 Query: 166 GGQLHSRMFQNFPTELLLSLAVEPLTANFHKWSLSVKNFTMNEKLKKFFNVLTTNTDGKI 225 + + +F+N P E F+ W+ S K+ +K+ + F +L + ++ Sbjct: 106 DKE--NDLFKNVPRE-------------FNAWA-SHKDEV--KKVPEGFEILAHSDICQV 147 Query: 226 EFISTMEGYKYPVYGVQWHPEKAPYEWKN 254 E M+ P+YGVQ+HPE A E+ N Sbjct: 148 E---AMKHKTKPIYGVQFHPEVAHTEYGN 173 >1WL8-A nrPDB Length = 189 Score = 109 bits (272), Expect = 2e-24, Method: Composition-based stats. Identities = 43/208 (20%), Positives = 82/208 (39%), Gaps = 38/208 (18%) Query: 47 VMKNYGRY-YIAASYVKYLESAGARVVPVRLDLTEKDYEILFKSINGILFPGGSVDLRRS 105 +M N G+Y + ++YL +++P L E GI+F GG L + Sbjct: 5 IMDNGGQYVHRIWRTLRYL-GVETKIIPNTTPLEEIKAMNP----KGIIFSGGP-SLENT 58 Query: 106 DYAKVAKIFYNLSIQSFDDGDYFPVWGTCLGFEELSLLISGECLLTATDTVDVAMPLNFT 165 + ++ +D+ + P+ G CLG + ++ G+ + + + ++ Sbjct: 59 G------NCEKV-LEHYDEFN-VPILGICLGHQLIAKFFGGK--VGRGEKAEYSL--VEI 106 Query: 166 GGQLHSRMFQNFPTELLLSLAVEPLTANFHKWSLSVKNFTMNEKLKKFFNVLTTNTDGKI 225 + +F+ P L + W S + ++L F +L + I Sbjct: 107 EIIDENEIFKGLPKRLKV-------------WE-SHMDEV--KELPPKFKILARSETCPI 150 Query: 226 EFISTMEGYKYPVYGVQWHPEKAPYEWK 253 E M+ + P+YGVQ+HPE A E Sbjct: 151 E---AMKHEELPIYGVQFHPEVAHTEKG 175 >2A9V-A nrPDB Length = 212 Score = 79.4 bits (194), Expect = 2e-15, Method: Composition-based stats. Identities = 32/209 (15%), Positives = 76/209 (36%), Gaps = 38/209 (18%) Query: 47 VMKNYGRY-YIAASYVKYLESAGARVVPVRLDLTEKDYEILFKSINGILFPGGSVDLRRS 105 V+ N G++ + ++ L ++VP +D +E D ++G++ GG+ ++ Sbjct: 18 VVDNGGQWTHREWRVLREL-GVDTKIVPNDIDSSELD------GLDGLVLSGGAPNIDEE 70 Query: 106 DYAKVAKIFYNLSIQSFDDGDYFPVWGTCLGFEELSLLISGECLLTATDTVDVAMPLNFT 165 S+ + D +P+ G C+G + ++L + + Sbjct: 71 LDKLG-------SVGKYIDDHNYPILGICVGAQFIALHFGAS--VVKAKHPEFGKTKVSV 121 Query: 166 GGQLHSRMFQNFPTELLLSLAVEPLTANFHKWSLSVKNFTMNEKLKKFFNVLTTNTDGKI 225 +F P+E+ + W + + +N L F + ++ ++ Sbjct: 122 --MHSENIFGGLPSEITV-------------WE-NHNDEIIN--LPDDFTLAASSATCQV 163 Query: 226 EFISTMEGYKYPVYGVQWHPEKAPYEWKN 254 + P+Y Q+HPE ++ Sbjct: 164 QGFY---HKTRPIYATQFHPEVEHTQYGR 189 >4WIM-A nrPDB Length = 568 Score = 67.9 bits (164), Expect = 5e-12, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 88/215 (40%), Gaps = 33/215 (15%) Query: 62 KYLESAGARVVPVRLDLTEKDYEILFKSIN-----GILFPGGSVDLRRSDYAKVAKIFYN 116 +Y R+ +++ KDY + K I G++ GG + + + K + Sbjct: 30 QYFHLIVKRLNNIKIFSETKDYGVELKDIKDMNIKGVILSGGPYSVTEAGSPHLKKEVFE 89 Query: 117 LSIQSFDDGDYFPVWGTCLGFEELSLLISGECLLTAT--------------DTVDVAMPL 162 ++ P++G C G +E+++ ++GE + T + ++ Sbjct: 90 YFLE-----KKIPIFGICYGMQEIAVQMNGEVKKSKTSEYGCTDVNILRNDNINNITYCR 144 Query: 163 NFTGGQLHSRMFQNFPTELLLSLAVEPLTANFHKWSLSVKNFTMNEKLKKFFNVLTTNTD 222 NF ++ N+ E + ++ ++ + K+ + F +++++ + Sbjct: 145 NFGDSSSAMDLYSNYKLMNETCCLFENIKSDITTVWMNHNDEVT--KIPENFYLVSSSEN 202 Query: 223 GKIEFISTMEGYKYPVYGVQWHPEKAPYEWKNLDG 257 I ++ +Y +YGVQ+HPE +++LDG Sbjct: 203 C---LICSIYNKEYNIYGVQYHPEV----YESLDG 230 >4WIN-A nrPDB Length = 249 Score = 67.1 bits (162), Expect = 8e-12, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 88/215 (40%), Gaps = 33/215 (15%) Query: 62 KYLESAGARVVPVRLDLTEKDYEILFKSIN-----GILFPGGSVDLRRSDYAKVAKIFYN 116 +Y R+ +++ KDY + K I G++ GG + + + K + Sbjct: 29 QYFHLIVKRLNNIKIFSETKDYGVELKDIKDMNIKGVILSGGPYSVTEAGSPHLKKEVFE 88 Query: 117 LSIQSFDDGDYFPVWGTCLGFEELSLLISGECLLTAT--------------DTVDVAMPL 162 ++ P++G C G +E+++ ++GE + T + ++ Sbjct: 89 YFLE-----KKIPIFGICYGMQEIAVQMNGEVKKSKTSEYGCTDVNILRNDNINNITYCR 143 Query: 163 NFTGGQLHSRMFQNFPTELLLSLAVEPLTANFHKWSLSVKNFTMNEKLKKFFNVLTTNTD 222 NF ++ N+ E + ++ ++ + K+ + F +++++ + Sbjct: 144 NFGDSSSAMDLYSNYKLMNETCCLFENIKSDITTVWMNHNDEVT--KIPENFYLVSSSEN 201 Query: 223 GKIEFISTMEGYKYPVYGVQWHPEKAPYEWKNLDG 257 I ++ +Y +YGVQ+HPE +++LDG Sbjct: 202 C---LICSIYNKEYNIYGVQYHPEV----YESLDG 229 >5TW7-A nrPDB Length = 529 Score = 66.7 bits (161), Expect = 1e-11, Method: Composition-based stats. Identities = 37/164 (22%), Positives = 57/164 (34%), Gaps = 30/164 (18%) Query: 91 NGILFPGGSVDLRRSDYAKVAKIFYNLSIQSFDDGDYFPVWGTCLGFEELSLLISGECLL 150 GI+ GG + SDY IF +L I PV G C G + ++ + GE Sbjct: 56 KGIILSGGPNSVYESDYQADTGIF-DLGI---------PVLGICYGMQFMAHHLGGEVQP 105 Query: 151 TATDTVDVAMPLNFTGGQLHSRMFQNFPTELLLSLAVEPLTANFHKWSLSVKNFTMNEKL 210 A + S + + + +L V W +S + KL Sbjct: 106 GNQREFGYAQVKT-----IDSGLTRGIQDDAPNTLDV---------W-MSHGDKVS--KL 148 Query: 211 KKFFNVLTTNTDGKIEFISTMEGYKYPVYGVQWHPEKAPYEWKN 254 F V+ I+ ME + YG+Q+HPE + Sbjct: 149 PDGFAVIGDTPSC---PIAMMENTEKQFYGIQFHPEVTHTKQGR 189 >3FIJ-A nrPDB Length = 254 Score = 60.5 bits (145), Expect = 9e-10, Method: Composition-based stats. Identities = 55/230 (23%), Positives = 86/230 (37%), Gaps = 29/230 (12%) Query: 33 KPIIGILMQKCRNKVMKNYGR--YYIAASYVKYLESAGARVVPVRLDLTEKDYEILFKS- 89 KP+IGI + V YG Y YV ++ G P+ L + + + S Sbjct: 4 KPVIGITGNRLVKGVDVFYGHRVTYTQQRYVDAIQKVGG--FPIALPIDDPSTAVQAISL 61 Query: 90 INGILFPGGS-----VDLRRSDYAKVA----KIFYNLSIQSFDDGDYFPVWGTCLGFEEL 140 ++G+L GG + L A + Y +++ P++ C G + + Sbjct: 62 VDGLLLTGGQDITPQLYLEEPSQEIGAYFPPRDSYEIALVRAALDAGKPIFAICRGMQLV 121 Query: 141 SLLISGECLLTATDTVDVAMP-LNFTGGQLHSRMFQNFPT-ELLLSLAVEPLTANFHKWS 198 ++ + G + A+ L QL S PT EL + L + H Sbjct: 122 NVALGGTLYQDISQVETKALQHLQRVDEQLGSHTIDIEPTSELAKHHPNKKLVNSLHHQF 181 Query: 199 LSVKNFTMNEKLKKFFNVLTTNTDGKIEFISTMEGYKYPVY--GVQWHPE 246 + +KL F V DG IE +EG P + GVQWHPE Sbjct: 182 I--------KKLAPSFKVTARTADGMIE---AVEGDNLPSWYLGVQWHPE 220 >3TQI-A nrPDB Length = 527 Score = 54.4 bits (129), Expect = 7e-08, Method: Composition-based stats. Identities = 37/210 (17%), Positives = 71/210 (33%), Gaps = 32/210 (15%) Query: 47 VMKNYGRY-YIAASYVKYLESAGARVVPVRLDLTEK-DYEILFKSINGILFPGGSVDLRR 104 ++ +Y + A V+ + ++P +D D+ +GI+ GG + Sbjct: 15 ILDFGSQYAQLIARRVREI-GVYCELMPCDIDEETIRDFNP-----HGIILSGGPETVTL 68 Query: 105 SDYAKVAKIFYNLSIQSFDDGDYFPVWGTCLGFEELSLLISGECLLTATDTVDVAMPLNF 164 S + + + PV G C G + ++ + G+ TA A Sbjct: 69 SHTLRAPAFIFEIGC---------PVLGICYGMQTMAYQLGGKVNRTAKAEFGHAQLRVL 119 Query: 165 TGGQLHSRMFQNFPTELLLSLAVEPLTANFHKWSLSVKNFTMNEKLKKFFNVLTTNTDGK 224 + +F E +S EPL W +S + +L F Sbjct: 120 ----NPAFLFDGI--EDQVSPQGEPL---LDVW-MSHGDIVS--ELPPGFEATACTD--- 164 Query: 225 IEFISTMEGYKYPVYGVQWHPEKAPYEWKN 254 ++ M +K +G+Q+HPE + Sbjct: 165 NSPLAAMADFKRRFFGLQFHPEVTHTPQGH 194 >1QDL-B nrPDB Length = 195 Score = 50.9 bits (120), Expect = 6e-07, Method: Composition-based stats. Identities = 24/129 (18%), Positives = 42/129 (32%), Gaps = 19/129 (14%) Query: 125 GDYFPVWGTCLGFEELSLLISGECLLTATDTVDVAMPLNFTGGQLHSRMFQNFPTELLLS 184 G P+ G CLG + + + F G + + N P L Sbjct: 75 GKRTPILGVCLGHQAIGYAFGAKIRRAR---------KVFHGKISNIILVNNSPLSLYYG 125 Query: 185 LAVEPLTANFHKWSLSVKNFTMNEKLKKFFNVLTTNTDGKIEFISTMEGYKYPVYGVQWH 244 +A E +H + + + ++ + I + +YP+YGVQ+H Sbjct: 126 IAKEFKATRYHSLVV---DEVHR---PLIVDAISAEDN----EIMAIHHEEYPIYGVQFH 175 Query: 245 PEKAPYEWK 253 PE Sbjct: 176 PESVGTSLG 184 >2YWB-A nrPDB Length = 503 Score = 50.9 bits (120), Expect = 7e-07, Method: Composition-based stats. Identities = 34/205 (16%), Positives = 68/205 (33%), Gaps = 39/205 (19%) Query: 47 VMKNYGRYYI-AASYVKYLESAGARVVPVRLDLTEKDYEILFKSINGILFPGGSVDLRRS 105 V+ +Y A ++ L A + ++P L E +L ++ GG + Sbjct: 4 VLDFGSQYTRLIARRLRELR-AFSLILPGDAPLEE----VLKHRPQALILSGGPRSVFDP 58 Query: 106 DYAKVAKIFYNLSIQSFDDGDYFPVWGTCLGFEELSLLISGECLLTATDTVDVAMPLNFT 165 D + ++ + P+ G C G + L+ + G + A Sbjct: 59 DAPRPDPRLFSSGL---------PLLGICYGMQLLAQELGG-----RVERAGRA------ 98 Query: 166 GGQLHSRMFQNFPTELLLSLAVEPLTANFHKWSLSVKNFTMNEKLKKFFNVLTTNTDGKI 225 + + L L E H+ +++ + V+ + + Sbjct: 99 --EYGKALLTRHEGPLFRGLEGEVQVWMSHQDAVTAP--------PPGWRVVAETEENPV 148 Query: 226 EFISTMEGYKYPVYGVQWHPEKAPY 250 I++ +G YGVQ+HPE A Sbjct: 149 AAIASPDGRA---YGVQFHPEVAHT 170 >1GPM-A nrPDB Length = 525 Score = 50.5 bits (119), Expect = 1e-06, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 52/163 (31%), Gaps = 24/163 (14%) Query: 91 NGILFPGGSVDLRRSDYAKVAKIFYNLSIQSFDDGDYFPVWGTCLGFEELSLLISGECLL 150 +GI+ GG + + + + + PV+G C G + +++ + G Sbjct: 52 SGIILSGGPESTTEENSPRAPQYVFEAGV---------PVFGVCYGMQTMAMQLGGHVEA 102 Query: 151 TATDTVDVAMPLNFTGGQLHSRMFQNFPTELLLSLAVEPLTANFHKWSLSVKNFTMNEKL 210 + A L + E L+ +PL W +S + + Sbjct: 103 SNEREFGYAQVEVVNDSALVRGI------EDALTADGKPL---LDVW-MSHGDKVT--AI 150 Query: 211 KKFFNVLTTNTDGKIEFISTMEGYKYPVYGVQWHPEKAPYEWK 253 F + + + M + YGVQ+HPE Sbjct: 151 PSDFITVASTESC---PFAIMANEEKRFYGVQFHPEVTHTRQG 190 >2VXO-A nrPDB Length = 697 Score = 44.0 bits (102), Expect = 9e-05, Method: Composition-based stats. Identities = 34/210 (16%), Positives = 73/210 (34%), Gaps = 39/210 (18%) Query: 47 VMKNYGRY-YIAASYVKYLESAGARVVPVRLDLTEKDYEILFKSINGILFPGGSVDLRRS 105 ++ +Y + V+ L + + P+ + I + I+ GG + Sbjct: 34 ILDAGAQYGKVIDRRVRELF-VQSEIFPLETP----AFAIKEQGFRAIIISGGPNSVYAE 88 Query: 106 DYAKVAKIFYNLSIQSFDDGDYFPVWGTCLGFEELSLLISGECLLTATDTVDVAMPLNFT 165 D +++ +I F G PV G C G + ++ + G + V N + Sbjct: 89 DAP-----WFDPAI--FTIGK--PVLGICYGMQMMNKVFGGTVHKKSVREDGV---FNIS 136 Query: 166 GGQLHSRMFQNFPTELLLSLAVEPLTANFHKWSLSVKNFTMNEKLKKFFNVLTTNTDGKI 225 S +F+ E ++ L + + +K+ F V+ + + Sbjct: 137 VDNTCS-LFRGLQKEEVVLL--------------THGDSV--DKVADGFKVVARSGN--- 176 Query: 226 EFISTMEGYKYPVYGVQWHPEKAPYEWKNL 255 ++ + +YG Q+HPE E + Sbjct: 177 -IVAGIANESKKLYGAQFHPEVGLTENGKV 205 >2VPI-A nrPDB Length = 218 Score = 44.0 bits (102), Expect = 9e-05, Method: Composition-based stats. Identities = 34/210 (16%), Positives = 73/210 (34%), Gaps = 39/210 (18%) Query: 47 VMKNYGRY-YIAASYVKYLESAGARVVPVRLDLTEKDYEILFKSINGILFPGGSVDLRRS 105 ++ +Y + V+ L + + P+ + I + I+ GG + Sbjct: 29 ILDAGAQYGKVIDRRVRELF-VQSEIFPLETP----AFAIKEQGFRAIIISGGPNSVYAE 83 Query: 106 DYAKVAKIFYNLSIQSFDDGDYFPVWGTCLGFEELSLLISGECLLTATDTVDVAMPLNFT 165 D +++ +I F G PV G C G + ++ + G + V N + Sbjct: 84 DAP-----WFDPAI--FTIGK--PVLGICYGMQMMNKVFGGTVHKKSVREDGV---FNIS 131 Query: 166 GGQLHSRMFQNFPTELLLSLAVEPLTANFHKWSLSVKNFTMNEKLKKFFNVLTTNTDGKI 225 S +F+ E ++ L + + +K+ F V+ + + Sbjct: 132 VDNTCS-LFRGLQKEEVVLL--------------THGDSV--DKVADGFKVVARSGN--- 171 Query: 226 EFISTMEGYKYPVYGVQWHPEKAPYEWKNL 255 ++ + +YG Q+HPE E + Sbjct: 172 -IVAGIANESKKLYGAQFHPEVGLTENGKV 200 >1C30-B nrPDB Length = 382 Score = 42.4 bits (98), Expect = 2e-04, Method: Composition-based stats. Identities = 38/193 (19%), Positives = 67/193 (34%), Gaps = 44/193 (22%) Query: 71 VVPVRLDLTEKDYEILFKSINGILFPGGSVDLRRSDYAKVAKIFYNLSIQSFDDGDYFPV 130 +VP + + +L + +GI G D DYA A IQ F + D PV Sbjct: 218 IVPAQTSAED----VLKMNPDGIFLSNGPGDPAPCDYAITA-------IQKFLETD-IPV 265 Query: 131 WGTCLGFEELSLLISGECLLTATDTVDVAMPLNFTGGQLHSRMFQNFPTELLLSLAVEPL 190 +G LG + L+L + + G + ++ +++ + Sbjct: 266 FGISLGHQLLALASGAKTV------------KMKFGHHGGNHPVKDVEKNVVM------I 307 Query: 191 TANFHKWSLSVKNFTMNEKLKKFFNVLTTNTDGKIEFISTMEG---YKYPVYGVQWHPEK 247 TA H +++ N ++ T + F T++G P + Q HPE Sbjct: 308 TAQNHGFAVDEATLPANLRV-------THKSL----FDGTLQGIHRTDKPAFSFQGHPEA 356 Query: 248 APYEWKNLDGISH 260 +P H Sbjct: 357 SPGPHDAAPLFDH 369 >1O1Y-A nrPDB Length = 239 Score = 35.5 bits (80), Expect = 0.030, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 35/106 (33%), Gaps = 6/106 (5%) Query: 76 LDLTEKDYEILFKSINGILFPGGSVDLRRSDYAKVAKIFYNLSIQSFDDGDYFPVWGTCL 135 EK E + + ++ GG + + K Y + P G CL Sbjct: 45 TPKGEK-LERPLEEYSLVVLLGGYMGAYEEEKYPFLK--YEFQLIEEILKKEIPFLGICL 101 Query: 136 GFEELSLLISGECLLTATDTVDVAMPLNFTGGQLHSRMFQNFPTEL 181 G + L+ ++ + ++ F ++ F+ FP L Sbjct: 102 GSQMLAKVLGASVYRGK-NGEEIGW--YFVEKVSDNKFFREFPDRL 144 >2VKT-A nrPDB Length = 289 Score = 34.0 bits (76), Expect = 0.082, Method: Composition-based stats. Identities = 42/233 (18%), Positives = 79/233 (33%), Gaps = 40/233 (17%) Query: 40 MQKCRNKVMKNYGRYYIAASY---VKYLESAG-ARVVPVRLDLTEKDYEILFKSINGILF 95 ++ C V K +A ++ + Y++S ++ + + +GIL Sbjct: 37 LRDCYASVFKALEHSALAINHKLNLMYIDSIDLEKITETEDPVKFHEAWQKLCKADGILV 96 Query: 96 PGGSVDLRRSDYAKVAKIFYNLSIQSFDDGDYFPVWGTCLGFEELSLLISGECL-LTATD 154 PGG + L S+ P G CLG + + + CL L D Sbjct: 97 PGG---------FGIRGTLGKLQAISWARTKKIPFLGVCLGMQLAVIEFARNCLNLKDAD 147 Query: 155 TVD------VAMPLNFTGGQLHS-----------RMFQNFPTELLLSLAVEPLTANFHKW 197 + + V + ++ + +F+ + L P H+ Sbjct: 148 STEFRPNAPVPLVIDMPEHNPGNLGGTMRLGIRRTVFKTENSILRKLYGDVPFIEERHR- 206 Query: 198 SLSVKNFTMNEKLKKFFNVLTTNTDGKI---EFISTMEGYKYPVY-GVQWHPE 246 F +N L K F + G+ + + +E +P + GVQ+HPE Sbjct: 207 ----HRFEVNPNLIKQFEQNDLSFVGQDVDGDRMEIIELANHPYFVGVQFHPE 255 >4ZDJ-A nrPDB Length = 587 Score = 33.6 bits (75), Expect = 0.12, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 59/179 (32%), Gaps = 30/179 (16%) Query: 89 SINGILFPGGSVDLRRSDYAKVAKIFYNLSIQSFDDGDYFPVWGTCLGFEELSLLISGEC 148 ++G+L PGG + I + ++ PV G CLG + + + + Sbjct: 358 DVHGVLIPGG---------FGIRGIEGKIGAIAYARARGLPVLGLCLGLQCIVIEAARSV 408 Query: 149 LLTATDTVDV----------AMP----LNFTGGQLHSRM-FQNFPTELLLSLAVEPLTAN 193 LT ++ + MP + L M ++P L V Sbjct: 409 GLTNANSAEFDPDTPDPVIATMPDQEEIVAGEADLGGTMRLGSYPAVLEPDSVVAQAYQT 468 Query: 194 F-----HKWSLSVKNFTMNEKLKKFFNVLTTNTDGK-IEFISTMEGYKYPVYGVQWHPE 246 H+ V N ++ + T+ DG +EF+ V G Q HPE Sbjct: 469 TQVSERHRHRYEVNNAYRDKIAESGLRFSGTSPDGHLVEFVEYPPDRHPFVVGTQAHPE 527 >1NJJ-A nrPDB Length = 425 Score = 32.8 bits (73), Expect = 0.19, Method: Composition-based stats. Identities = 33/130 (25%), Positives = 52/130 (40%), Gaps = 21/130 (16%) Query: 60 YVKYLESAGARVVPVRLDLTEKDYEILFKSINGILFPGGSVDLRRSDYAKVAKIFYNLSI 119 VK+ GA+V R L + + L + G+ F GS S +A Sbjct: 167 SVKF----GAKVEDCRFILEQ--AKKLNIDVTGVSFHVGSGSTDASTFA----------- 209 Query: 120 QSFDDGDYFPVWGTCLGFEELSLLISGECLLTATDTVDVAMPLNFTGGQLHSRMFQNFPT 179 Q+ D + GT LGF L I G T D + G +++ + ++FP Sbjct: 210 QAISDSRFVFDMGTELGFNMHILDIGG----GFPGTRDAPLKFEEIAGVINNALEKHFPP 265 Query: 180 ELLLSLAVEP 189 +L L++ EP Sbjct: 266 DLKLTIVAEP 275 >1I7S-B nrPDB Length = 193 Score = 32.0 bits (71), Expect = 0.34, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 38/119 (31%), Gaps = 24/119 (20%) Query: 128 FPVWGTCLGFEELSLLISGECLLTATDTVDVAMPLNFTGGQLHSRMFQNFPTELLLSLAV 187 P+ G CLG + + G+ A + G + + M P SL Sbjct: 78 LPIIGICLGHQAIVEAYGGQVGQAGEILHGKASAIAHDGEGMFAGMANPLPVARYHSLVG 137 Query: 188 EPLTANFHKWSLSVKNFTMNEKLKKFFNVLTTNTDGKIEFISTMEGYKYPVYGVQWHPE 246 + A + T+N + + V+ D + V G Q+HPE Sbjct: 138 SNIPA----------DLTVNARFGEM--VMAVRDD------------RRRVCGFQFHPE 172 >4GUD-A nrPDB Length = 211 Score = 31.7 bits (70), Expect = 0.44, Method: Composition-based stats. Identities = 25/125 (20%), Positives = 48/125 (38%), Gaps = 14/125 (11%) Query: 129 PVWGTCLGFEELSLLISGECLLTATDTVDVAMPLNFTGGQLHSRMFQN----FPTELLLS 184 P+ G CLG + L L + ++ L G++ R+ Q P + Sbjct: 74 PLLGICLGMQLLGKLSEEK----GQKADEIVQCLGLVDGEV--RLLQTGDLPLPHMGWNT 127 Query: 185 LAVEPLTANFHKWSL-SVKNFTMNEKLKKFFNVLTTNTDGKIEFISTMEGYKYPVYGVQW 243 + V+ F+ + F + + + G+ F + ++ Y YGVQ+ Sbjct: 128 VQVKEGHPLFNGIEPDAYFYFVHSFAMPVGDYTIAQCEYGQ-PFSAAIQAGNY--YGVQF 184 Query: 244 HPEKA 248 HPE++ Sbjct: 185 HPERS 189 >1VCN-A nrPDB Length = 550 Score = 30.5 bits (67), Expect = 1.00, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 23/62 (37%), Gaps = 9/62 (14%) Query: 78 LTEKDYEILFKSINGILFPGGSVDLRRSDYAKVAKIFYNLSIQSFDDGDYFPVWGTCLGF 137 L D + F+ ++GIL PGG + A+ + P G CLG Sbjct: 344 LEAADLDEAFRDVSGILVPGGFGVRGIEGKVRAAQ---------YARERKIPYLGICLGL 394 Query: 138 EE 139 + Sbjct: 395 QI 396 >4ADS-G nrPDB Length = 217 Score = 29.7 bits (65), Expect = 1.7, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 1/51 (1%) Query: 91 NGILFPGGSVDLRRSDYAKVAKIFYNLSIQSFDDGDYFPVWGTCLGFEELS 141 +G++ PGG R A YN ++ F P+WGTC G LS Sbjct: 43 DGLVIPGGESTTVRRCCAYENDTLYN-ALVHFIHVLKKPIWGTCAGCILLS 92 >4NZF-A nrPDB Length = 448 Score = 29.7 bits (65), Expect = 1.7, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 37/101 (36%), Gaps = 5/101 (4%) Query: 46 KVMKNYGRYYIAASYVKYLESAGARVVPVRLDLTEKDYEILFKSINGILFPGGSVDLRR- 104 K +K +G Y+ Y A + + + L +Y L ++N G + Sbjct: 53 KYLKPFGWEYVVVDIQWYEPGANSSIYRPFVPLEMDEYSRLMPAVNRFPSAKGGKGFKPL 112 Query: 105 SDYAKVAKIFYNL----SIQSFDDGDYFPVWGTCLGFEELS 141 +DY + + + I P+ GT +G +++ Sbjct: 113 ADYIHNLGLKFGIHIMRGIPRQAVHQNTPILGTNVGARDIA 153 >3M3P-A nrPDB Length = 250 Score = 29.3 bits (64), Expect = 2.1, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 15/31 (48%) Query: 117 LSIQSFDDGDYFPVWGTCLGFEELSLLISGE 147 L++ PV G CLG + L+ + GE Sbjct: 72 LALIRDAVAQRVPVIGHCLGGQLLAKAMGGE 102 >4ZGV-A nrPDB Length = 868 Score = 29.3 bits (64), Expect = 2.1, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 41/94 (43%), Gaps = 3/94 (3%) Query: 220 NTDGKIEF---ISTMEGYKYPVYGVQWHPEKAPYEWKNLDGISHAPNAVKTAFYLAEFFV 276 N GK +F +T++G Y V + H E + + H + + + L Sbjct: 639 NRQGKEQFGRETTTIDGQSYRVMNNKGHTEGNTFSLEVEPISPHRFSFAEVNWKLGASVT 698 Query: 277 NEARKNNHHFKSESEEEKALIYQFSPIYTGNISS 310 + +++ S +++E+ +I+ +Y G+I + Sbjct: 699 KNKSNSIYYYDSANQDEQRVIFDDKLMYRGDIDA 732 >1EBF-A nrPDB Length = 358 Score = 29.0 bits (63), Expect = 3.3, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 56/152 (36%), Gaps = 20/152 (13%) Query: 27 HGDTAKKPIIGILMQKCRNKVMKNYGRYYIAASYVKYLESAGARVVPVRLDLTEK--DYE 84 H T+ KP+I ++ N YIA Y K++E+ + P + + ++ Sbjct: 78 HLKTSPKPVI----------LVDNTSSAYIAGFYTKFVENGISIATPNKKAFSSDLATWK 127 Query: 85 ILF--KSINGILFPGGSVDLRRSDYAKVAKIFYNLSIQSFDDGDYFP-VWGTCLGFEELS 141 LF K NG ++ +V F IQ+ D+ + ++ L + Sbjct: 128 ALFSNKPTNGFVYHEATV-----GAGLPIISFLREIIQTGDEVEKIEGIFSGTLSYIFNE 182 Query: 142 LLISGECLLTATDTVDVAMPLNFTGGQLHSRM 173 S + +D V VA L +T + Sbjct: 183 FSTSQANDVKFSDVVKVAKKLGYTEPDPRDDL 214 >4NMY-A nrPDB Length = 303 Score = 27.8 bits (60), Expect = 5.9, Method: Composition-based stats. Identities = 34/193 (17%), Positives = 65/193 (33%), Gaps = 20/193 (10%) Query: 144 ISGECLLTATDTVDVAMPLNFTGGQ-LHSRMFQNFPTELLLSLAVEPLTANFHKWSLSVK 202 IS + +T T + +P+ H+ P E ++ A + + W + Sbjct: 62 ISYQEQVTYAKTSEDPLPIKAVATVIQHNTSGFASPKEKNITTAKDFEGKTYGGWGSPSE 121 Query: 203 NFTMNEKLKKF---FNVLTTNTDGKIEFISTMEGYKYPVYGVQWHPEKAPYEWKNLDGIS 259 +KK FN L G+ +F + M+ + W KA +L+ I Sbjct: 122 EAVFKAVMKKNRADFNKLKIVNTGQDDFFAAMKTVDFAWIFEGWDAVKADLIGYDLNFIP 181 Query: 260 ----------HAP------NAVKTAFYLAEFFVNEARKNNHHFKSESEEEKALIYQFSPI 303 + P +K LA+ F+ K + EE ++ + +P Sbjct: 182 VKDLDERLDYYTPLIISNETVLKDNPELAKKFLKATTKGYEYAIKNPEESAKILVKHAPE 241 Query: 304 YTGNISSFQQCYI 316 ++ Q Y+ Sbjct: 242 VDEKLALKSQEYL 254 >4V0R-A nrPDB Length = 892 Score = 27.4 bits (59), Expect = 8.4, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 18/45 (40%), Gaps = 11/45 (24%) Query: 216 VLTTNTDGKIEFISTMEGYKYPVYGVQWHPEKAPYEWKNLDGISH 260 +L N GK+ P QW P K ++W+ + SH Sbjct: 675 LLALNDMGKVR-------KDIP----QWQPSKGWHDWQQVPFCSH 708 >4C11-A nrPDB Length = 638 Score = 27.4 bits (59), Expect = 8.4, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 18/45 (40%), Gaps = 11/45 (24%) Query: 216 VLTTNTDGKIEFISTMEGYKYPVYGVQWHPEKAPYEWKNLDGISH 260 +L N GK+ P QW P K ++W+ + SH Sbjct: 416 LLALNDMGKVR-------KDIP----QWQPSKGWHDWQQVPFCSH 449 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.314 0.127 0.346 Lambda K H 0.267 0.0387 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 11,656,798 Number of Sequences: 36641 Number of extensions: 434251 Number of successful extensions: 1258 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 28 Number of HSP's successfully gapped in prelim test: 22 Number of HSP's that attempted gapping in prelim test: 1197 Number of HSP's gapped (non-prelim): 54 length of query: 318 length of database: 10,336,785 effective HSP length: 97 effective length of query: 221 effective length of database: 6,782,608 effective search space: 1498956368 effective search space used: 1498956368 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 59 (27.4 bits)