BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q92484 (453 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5EBE-A nrPDB 865 0.0 5FCB-A nrPDB 735 0.0 5KAR-A nrPDB 353 1e-97 5HQN-A nrPDB 179 2e-45 5FI9-A nrPDB 179 2e-45 5I81-A nrPDB 175 3e-44 5Z0Q-C nrPDB 35 0.098 2NXF-A nrPDB 32 0.63 3NOL-A nrPDB 30 2.6 3SOH-A nrPDB 30 2.9 5MRV-A nrPDB 29 3.8 4QJ3-A nrPDB 29 4.4 2BCJ-Q nrPDB 29 4.4 2O2X-A nrPDB 29 4.5 3PS0-A nrPDB 29 4.8 2NV5-A nrPDB 28 7.6 >5EBE-A nrPDB Length = 418 Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust. Identities = 418/418 (100%), Positives = 418/418 (100%) Query: 33 PPPAIGQFWHVTDLHLDPTYHITDDHTKVCASSKGANASNPGPFGDVLCDSPYQLILSAF 92 PPPAIGQFWHVTDLHLDPTYHITDDHTKVCASSKGANASNPGPFGDVLCDSPYQLILSAF Sbjct: 1 PPPAIGQFWHVTDLHLDPTYHITDDHTKVCASSKGANASNPGPFGDVLCDSPYQLILSAF 60 Query: 93 DFIKNSGQEASFMIWTGDSPPHVPVPELSTDTVINVITNMTTTIQSLFPNLQVFPALGNH 152 DFIKNSGQEASFMIWTGDSPPHVPVPELSTDTVINVITNMTTTIQSLFPNLQVFPALGNH Sbjct: 61 DFIKNSGQEASFMIWTGDSPPHVPVPELSTDTVINVITNMTTTIQSLFPNLQVFPALGNH 120 Query: 153 DYWPQDQLPVVTSKVYNAVANLWKPWLDEEAISTLRKGGFYSQKVTTNPNLRIISLNTNL 212 DYWPQDQLPVVTSKVYNAVANLWKPWLDEEAISTLRKGGFYSQKVTTNPNLRIISLNTNL Sbjct: 121 DYWPQDQLPVVTSKVYNAVANLWKPWLDEEAISTLRKGGFYSQKVTTNPNLRIISLNTNL 180 Query: 213 YYGPNIMTLNKTDPANQFEWLESTLNNSQQNKEKVYIIAHVPVGYLPSSQNITAMREYYN 272 YYGPNIMTLNKTDPANQFEWLESTLNNSQQNKEKVYIIAHVPVGYLPSSQNITAMREYYN Sbjct: 181 YYGPNIMTLNKTDPANQFEWLESTLNNSQQNKEKVYIIAHVPVGYLPSSQNITAMREYYN 240 Query: 273 EKLIDIFQKYSDVIAGQFYGHTHRDSIMVLSDKKGSPVNSLFVAPAVTPVKSVLEKQTNN 332 EKLIDIFQKYSDVIAGQFYGHTHRDSIMVLSDKKGSPVNSLFVAPAVTPVKSVLEKQTNN Sbjct: 241 EKLIDIFQKYSDVIAGQFYGHTHRDSIMVLSDKKGSPVNSLFVAPAVTPVKSVLEKQTNN 300 Query: 333 PGIRLFQYDPRDYKLLDMLQYYLNLTEANLKGESIWKLEYILTQTYDIEDLQPESLYGLA 392 PGIRLFQYDPRDYKLLDMLQYYLNLTEANLKGESIWKLEYILTQTYDIEDLQPESLYGLA Sbjct: 301 PGIRLFQYDPRDYKLLDMLQYYLNLTEANLKGESIWKLEYILTQTYDIEDLQPESLYGLA 360 Query: 393 KQFTILDSKQFIKYYNYFFVSYDSSVTCDKTCKAFQICAIMNLDNISYADCLKQLYIK 450 KQFTILDSKQFIKYYNYFFVSYDSSVTCDKTCKAFQICAIMNLDNISYADCLKQLYIK Sbjct: 361 KQFTILDSKQFIKYYNYFFVSYDSSVTCDKTCKAFQICAIMNLDNISYADCLKQLYIK 418 >5FCB-A nrPDB Length = 433 Score = 735 bits (1898), Expect = 0.0, Method: Compositional matrix adjust. Identities = 346/424 (81%), Positives = 385/424 (90%), Gaps = 3/424 (0%) Query: 23 LPVAPAGGRNPPPAIGQFWHVTDLHLDPTYHITDDHTKVCASSKGANASNPGPFGDVLCD 82 +P+APA + PA+GQFWHVTDLHLDPTYHITDD TKVCASSKGANASNPGPFGDVLCD Sbjct: 11 VPLAPA---DRAPAVGQFWHVTDLHLDPTYHITDDRTKVCASSKGANASNPGPFGDVLCD 67 Query: 83 SPYQLILSAFDFIKNSGQEASFMIWTGDSPPHVPVPELSTDTVINVITNMTTTIQSLFPN 142 SPYQLILSAFDFIKNSGQEASFMIWTGDSPPHVPVPELST TVI VITNMT T+Q+LFPN Sbjct: 68 SPYQLILSAFDFIKNSGQEASFMIWTGDSPPHVPVPELSTGTVIKVITNMTMTVQNLFPN 127 Query: 143 LQVFPALGNHDYWPQDQLPVVTSKVYNAVANLWKPWLDEEAISTLRKGGFYSQKVTTNPN 202 LQVFPALGNHDYWPQDQLP+VTSKVY+AVA+LWKPWL EEAISTL+KGGFYSQKV +NP Sbjct: 128 LQVFPALGNHDYWPQDQLPIVTSKVYSAVADLWKPWLGEEAISTLKKGGFYSQKVASNPG 187 Query: 203 LRIISLNTNLYYGPNIMTLNKTDPANQFEWLESTLNNSQQNKEKVYIIAHVPVGYLPSSQ 262 LRIISLNTNLYYGPNIMTLNKTDPANQFEWLE+TLN+S NKEKVYIIAHVPVGYLP + Sbjct: 188 LRIISLNTNLYYGPNIMTLNKTDPANQFEWLENTLNSSLWNKEKVYIIAHVPVGYLPYAT 247 Query: 263 NITAMREYYNEKLIDIFQKYSDVIAGQFYGHTHRDSIMVLSDKKGSPVNSLFVAPAVTPV 322 + A+R+YYNEKL+DIF++YS VIAGQFYGHTHRDS+MVLSDK G+P+NS+FVAPAVTPV Sbjct: 248 DTPAIRQYYNEKLLDIFRRYSSVIAGQFYGHTHRDSLMVLSDKNGNPLNSVFVAPAVTPV 307 Query: 323 KSVLEKQTNNPGIRLFQYDPRDYKLLDMLQYYLNLTEANLKGESIWKLEYILTQTYDIED 382 K VL+K+TNNPG+RLFQY P DY LLDM+QYYLNLTEANLKGES W LEY+LTQ Y + D Sbjct: 308 KGVLQKETNNPGVRLFQYKPGDYTLLDMVQYYLNLTEANLKGESNWTLEYVLTQAYSVAD 367 Query: 383 LQPESLYGLAKQFTILDSKQFIKYYNYFFVSYDSSVTCDKTCKAFQICAIMNLDNISYAD 442 LQP+SLY L +QF DSKQF+KYY+Y+FVSYDSS TCD+ CK Q+CAIMNLD++SY D Sbjct: 368 LQPKSLYALVQQFATKDSKQFLKYYHYYFVSYDSSATCDQHCKTLQVCAIMNLDSMSYDD 427 Query: 443 CLKQ 446 CLKQ Sbjct: 428 CLKQ 431 >5KAR-A nrPDB Length = 427 Score = 353 bits (905), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 171/420 (40%), Positives = 255/420 (60%), Gaps = 10/420 (2%) Query: 37 IGQFWHVTDLHLDPTYHITDDHTKVCASSKGANASNPGPFGDVLCDSPYQLILSAFDFIK 96 +G+FWH++DLHLDP Y ++ D +VC S+ N GP+GD LCDSP+ LI S+ +K Sbjct: 12 LGRFWHISDLHLDPNYTVSKDPLQVCPSAGSQPVLNAGPWGDYLCDSPWALINSSLYAMK 71 Query: 97 NSGQEASFMIWTGDSPPHVPVPELSTDTVINVITNMTTTIQSLFPNLQVFPALGNHDYWP 156 + F++WTGD PHVP L V+ ++ +T I+ +FP+ +V+ ALGNHD+ P Sbjct: 72 EIEPKPDFILWTGDDTPHVPNESLGEAAVLAIVERLTNLIKEVFPDTKVYAALGNHDFHP 131 Query: 157 QDQLPVVTSKVYNAVANLWKPWLDEEAISTLRKGGFYSQKVTTNPNL-RIISLNTNLYYG 215 ++Q P ++++YN VA LW+PWL E+ + ++G FYS+K+ R++ LNTNLYY Sbjct: 132 KNQFPAQSNRIYNQVAELWRPWLSNESYALFKRGAFYSEKLPGPSRAGRVVVLNTNLYYS 191 Query: 216 PNIMTLNKTDPANQFEWLESTLNNSQQNKEKVYIIAHVPVGYLPSSQNITAMREYYNEKL 275 N T DP QF WL L+N+ ++ E VY+I HVP G+ +QN RE +NE+ Sbjct: 192 NNEQTAGMADPGEQFRWLGDVLSNASRDGEMVYVIGHVPPGFFEKTQNKAWFRESFNEEY 251 Query: 276 IDIFQKYSDVIAGQFYGHTHRDSIMVLSDKKGSPVNSLFVAPAVTPVKSVLE---KQTNN 332 + + QK+ VIAGQF+GH H DS + D G+P+N +F+ P VTP K+ L NN Sbjct: 252 LKVIQKHHRVIAGQFFGHHHTDSFRMFYDNTGAPINVMFLTPGVTPWKTTLPGVVDGANN 311 Query: 333 PGIRLFQYDPRDYKLLDMLQYYLNLTEANLKGESIWKLEYILTQTYDIEDLQPESLYGLA 392 PGIR+F+YD L D++ Y+LNL +AN++ W+ EY LT+ Y + D S++ Sbjct: 312 PGIRIFEYDRATLNLKDLVTYFLNLRQANVQETPRWEQEYRLTEAYQVPDASVSSMH--- 368 Query: 393 KQFTILDSKQFI--KYYNYFFVSYDSSVTCDKTCKAFQICAIMNLDNISYADCLKQLYIK 450 T + S+ I +YY Y VSY+ +TC+ +C+ +CAI ++ +YA CL L K Sbjct: 369 TALTRIASEPHILQRYYVYNSVSYN-HLTCEDSCRIEHVCAIQHVAFNTYATCLHGLGAK 427 >5HQN-A nrPDB Length = 473 Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 134/426 (31%), Positives = 203/426 (47%), Gaps = 47/426 (11%) Query: 43 VTDLHLDPTY-HITDDHTK---VCASSKG---ANASNPGPFGDV-LCDSPYQLILSAFDF 94 +TDLH D Y TD + C G + G +G+ CD P + + S Sbjct: 48 LTDLHWDHEYLEGTDPYCADPLCCRRGSGWPPNSQKGAGFWGEYSKCDLPLRTLES---L 104 Query: 95 IKNSGQEASFMI--WTGDSPPHVPVPELSTDTVINVITNMTTTIQSLFPNLQVFPALGNH 152 +K G F + WTGD P H V + S + +T +T ++ + V+PA+GNH Sbjct: 105 LKGLGPAGPFEMVYWTGDIPAH-DVWQQSRQDQLRALTTITDLVRKFLGPVPVYPAVGNH 163 Query: 153 DYWPQDQLPVVTSK-------VYNAVANLWKPWLDEEAISTLRKGGFYSQKVTTNPNLRI 205 + P + P K +Y A+A W+PWL +A+ TLR GGFY+ +T P LR+ Sbjct: 164 ESTPVNGFPPPFIKGNQSSQWLYEAMAKAWEPWLPADALHTLRIGGFYA--LTPRPGLRL 221 Query: 206 ISLNTNLYYGPNI-MTLNKTDPANQFEWLESTLNNSQQNKEKVYIIAHVPVGYLPSSQNI 264 ISLN N N + +N TDPA Q +WL L ++ +KV+II H+P G+ S + Sbjct: 222 ISLNMNFCSRENFWLLINSTDPAGQLQWLVEELQAAENRGDKVHIIGHIPPGHCLKSWSW 281 Query: 265 TAMREYYNEKLIDIFQKYSDVIAGQFYGHTHRDSIMVLSDKK--GSPVNSLFVAPAVTPV 322 YY I +Y + +AGQF+GHTH D + D++ P+ F+AP+ T Sbjct: 282 N----YYK-----IIARYENTLAGQFFGHTHVDEFEIFYDEETLSRPLAVAFLAPSATTF 332 Query: 323 KSVLEKQTNNPGIRLFQ----YDPRDYKLLDMLQYYLNLTEANLKGES-IWKLEYILTQT 377 ++ NPG R++Q Y + +LD Y LNLT+AN G + WK Y +T Sbjct: 333 INL------NPGYRVYQIDGNYPGSSHVVLDHETYILNLTQANAAGGTPSWKRLYRARET 386 Query: 378 YDIEDLQPESLYGLAKQFTILDSKQFIKYYNYFFVSYDSSVTCDKTCKAFQICAIMNLDN 437 Y + D P S + L + D + F ++ + + S C C+ +CA ++ Sbjct: 387 YGLPDAMPASWHNLVYRMRD-DEQLFQTFWFLYHKGHPPSEPCGTPCRLATLCAQLSARA 445 Query: 438 ISYADC 443 S A C Sbjct: 446 DSPALC 451 >5FI9-A nrPDB Length = 538 Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 134/426 (31%), Positives = 203/426 (47%), Gaps = 47/426 (11%) Query: 43 VTDLHLDPTY-HITDDHTK---VCASSKG---ANASNPGPFGDV-LCDSPYQLILSAFDF 94 +TDLH D Y TD + C G + G +G+ CD P + + S Sbjct: 129 LTDLHWDHEYLEGTDPYCADPLCCRRGSGWPPNSQKGAGFWGEYSKCDLPLRTLES---L 185 Query: 95 IKNSGQEASFMI--WTGDSPPHVPVPELSTDTVINVITNMTTTIQSLFPNLQVFPALGNH 152 +K G F + WTGD P H V + S + +T +T ++ + V+PA+GNH Sbjct: 186 LKGLGPAGPFEMVYWTGDIPAH-DVWQQSRQDQLRALTTITDLVRKFLGPVPVYPAVGNH 244 Query: 153 DYWPQDQLPVVTSK-------VYNAVANLWKPWLDEEAISTLRKGGFYSQKVTTNPNLRI 205 + P + P K +Y A+A W+PWL +A+ TLR GGFY+ +T P LR+ Sbjct: 245 ESTPVNGFPPPFIKGNQSSQWLYEAMAKAWEPWLPADALHTLRIGGFYA--LTPRPGLRL 302 Query: 206 ISLNTNLYYGPNI-MTLNKTDPANQFEWLESTLNNSQQNKEKVYIIAHVPVGYLPSSQNI 264 ISLN N N + +N TDPA Q +WL L ++ +KV+II H+P G+ S + Sbjct: 303 ISLNMNFCSRENFWLLINSTDPAGQLQWLVEELQAAENRGDKVHIIGHIPPGHCLKSWSW 362 Query: 265 TAMREYYNEKLIDIFQKYSDVIAGQFYGHTHRDSIMVLSDKK--GSPVNSLFVAPAVTPV 322 YY I +Y + +AGQF+GHTH D + D++ P+ F+AP+ T Sbjct: 363 N----YYK-----IIARYENTLAGQFFGHTHVDEFEIFYDEETLSRPLAVAFLAPSATTF 413 Query: 323 KSVLEKQTNNPGIRLFQ----YDPRDYKLLDMLQYYLNLTEANLKGES-IWKLEYILTQT 377 ++ NPG R++Q Y + +LD Y LNLT+AN G + WK Y +T Sbjct: 414 INL------NPGYRVYQIDGNYPGSSHVVLDHETYILNLTQANAAGGTPSWKRLYRARET 467 Query: 378 YDIEDLQPESLYGLAKQFTILDSKQFIKYYNYFFVSYDSSVTCDKTCKAFQICAIMNLDN 437 Y + D P S + L + D + F ++ + + S C C+ +CA ++ Sbjct: 468 YGLPDAMPASWHNLVYRMRD-DEQLFQTFWFLYHKGHPPSEPCGTPCRLATLCAQLSARA 526 Query: 438 ISYADC 443 S A C Sbjct: 527 DSPALC 532 >5I81-A nrPDB Length = 583 Score = 175 bits (444), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 130/424 (30%), Positives = 202/424 (47%), Gaps = 43/424 (10%) Query: 43 VTDLHLDPTY-HITD-DHTKVCASSKGAN---ASNPGP--FGDV-LCDSPYQLILSAFDF 94 +TDLH D Y TD D +G+ AS PG +G+ CD P + + S Sbjct: 158 LTDLHWDHDYLEGTDPDCADPLCCRRGSGLPPASRPGAGYWGEYSKCDLPLRTLESLLSG 217 Query: 95 IKNSGQEASFMIWTGDSPPHVPVPELSTDTVINVITNMTTTIQSLFPNLQVFPALGNHDY 154 + +G + WTGD P H + D + +T +T ++ + V+PA+GNH+ Sbjct: 218 LGPAG-PFDMVYWTGDIPAHDVWHQTRQDQ-LRALTTVTALVRKFLGPVPVYPAVGNHES 275 Query: 155 WPQDQLPV-------VTSKVYNAVANLWKPWLDEEAISTLRKGGFYSQKVTTNPNLRIIS 207 P + P + +Y A+A W+PWL EA+ TLR GGFY+ ++ P LR+IS Sbjct: 276 TPVNSFPPPFIEGNHSSRWLYEAMAKAWEPWLPAEALRTLRIGGFYA--LSPYPGLRLIS 333 Query: 208 LNTNLYYGPNI-MTLNKTDPANQFEWLESTLNNSQQNKEKVYIIAHVPVGYLPSSQNITA 266 LN N N + +N TDPA Q +WL L ++ +KV+II H+P G+ S + Sbjct: 334 LNMNFCSRENFWLLINSTDPAGQLQWLVGELQAAEDRGDKVHIIGHIPPGHCLKSWSWNY 393 Query: 267 MREYYNEKLIDIFQKYSDVIAGQFYGHTHRDSIMVLSDKK--GSPVNSLFVAPAVTPVKS 324 R I +Y + +A QF+GHTH D V D++ P+ F+AP+ T Sbjct: 394 YR---------IVARYENTLAAQFFGHTHVDEFEVFYDEETLSRPLAVAFLAPSATTYIG 444 Query: 325 VLEKQTNNPGIRLFQ----YDPRDYKLLDMLQYYLNLTEANLKGE-SIWKLEYILTQTYD 379 + NPG R++Q Y + +LD Y LNLT+AN+ G W+L Y +TY Sbjct: 445 L------NPGYRVYQIDGNYSGSSHVVLDHETYILNLTQANIPGAIPHWQLLYRARETYG 498 Query: 380 IEDLQPESLYGLAKQFTILDSKQFIKYYNYFFVSYDSSVTCDKTCKAFQICAIMNLDNIS 439 + + P + + L + D + F ++ + + S C C+ +CA ++ S Sbjct: 499 LPNTLPTAWHNLVYRMRG-DMQLFQTFWFLYHKGHPPSEPCGTPCRLATLCAQLSARADS 557 Query: 440 YADC 443 A C Sbjct: 558 PALC 561 >5Z0Q-C nrPDB Length = 389 Score = 34.7 bits (78), Expect = 0.098, Method: Compositional matrix adjust. Identities = 32/128 (25%), Positives = 48/128 (37%), Gaps = 10/128 (7%) Query: 114 HVPVPELSTDTVINVITNMTTT----IQSLFPNLQVFP---ALGNHDYWPQDQLPVVTSK 166 H+P LS D IT M+ + I L +L V P + + +P V Sbjct: 218 HIPFASLSDDAAQRSITLMSPSKSFNIAGLGASLAVIPNPELRARFNRMRKGMVPDVDVL 277 Query: 167 VYNAVANLWK---PWLDEEAISTLRKGGFYSQKVTTNPNLRIISLNTNLYYGPNIMTLNK 223 Y A + W+ PWLD + +Q V P L +++ + + L Sbjct: 278 AYVAASAAWREGQPWLDAQLDYLRANRDMLAQHVNRLPGLSMVTPEASFLGWIDASGLGV 337 Query: 224 TDPANQFE 231 DPA FE Sbjct: 338 ADPALFFE 345 >2NXF-A nrPDB Length = 322 Score = 32.0 bits (71), Expect = 0.63, Method: Compositional matrix adjust. Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 3/66 (4%) Query: 193 YSQKVTTNPNLRIISLN---TNLYYGPNIMTLNKTDPANQFEWLESTLNNSQQNKEKVYI 249 +S ++ T N + LN ++ + N Q +WL++ L S +E+V I Sbjct: 166 HSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQERVLI 225 Query: 250 IAHVPV 255 +H+PV Sbjct: 226 FSHLPV 231 >3NOL-A nrPDB Length = 262 Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust. Identities = 13/38 (34%), Positives = 24/38 (63%), Gaps = 2/38 (5%) Query: 288 GQFYGHTHRDSIMVLSDKKGSPVNSLFVAPAVTPVKSV 325 G+ +G TH D +++SD G+PV ++TPV+++ Sbjct: 127 GEGWGLTHNDQYLIMSD--GTPVLRFLDPESLTPVRTI 162 >3SOH-A nrPDB Length = 188 Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust. Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 1/50 (2%) Query: 109 GDSPPHVPVPELSTDTVINVITNMTTTIQSLFPNLQVF-PALGNHDYWPQ 157 G++PP+ P E+ T + +TNM T + + + Q F P++ N + PQ Sbjct: 90 GENPPNRPPTEIETSIMRKEVTNMLTLLAQAWSDFQYFIPSIENVETNPQ 139 >5MRV-A nrPDB Length = 355 Score = 29.3 bits (64), Expect = 3.8, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 54/128 (42%), Gaps = 33/128 (25%) Query: 267 MREYYNEKLIDIFQKYSDVIAGQFYG---HTHRDSIMVLSDKKGSPVNSL---------- 313 M E Y E + +I +KY +V+ F G TH + +S G+P + Sbjct: 59 MGEIY-EWMREISEKYKEVVTQHFLGVTYETHPIYYLKISQPSGNPKKIIWMDCGIHARE 117 Query: 314 FVAPAVTP--VKSVLEKQTNNPGIRLFQYDPRDYKLLDMLQYYLNLTEANLKGESIWKLE 371 ++APA VK +L+ +N IR KLL L +Y+ L N+ G Sbjct: 118 WIAPAFCQWFVKEILQNHKDNSRIR---------KLLRNLDFYV-LPVLNIDG------- 160 Query: 372 YILTQTYD 379 YI T T D Sbjct: 161 YIYTWTTD 168 >4QJ3-A nrPDB Length = 379 Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust. Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 4/45 (8%) Query: 312 SLFVAPAVTPVKSVLEKQTNNPGIRLFQYDPRDYKLLDMLQYYLN 356 S F P V +KS+ N+PGI+ R+Y+L D +YYLN Sbjct: 142 SAFENPYVDAIKSLW----NDPGIQECYDRRREYQLSDSTKYYLN 182 >2BCJ-Q nrPDB Length = 353 Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust. Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 4/45 (8%) Query: 312 SLFVAPAVTPVKSVLEKQTNNPGIRLFQYDPRDYKLLDMLQYYLN 356 S F P V +KS+ N+PGI+ R+Y+L D +YYLN Sbjct: 116 SAFENPYVDAIKSLW----NDPGIQECYDRRREYQLSDSTKYYLN 156 >2O2X-A nrPDB Length = 218 Score = 28.9 bits (63), Expect = 4.5, Method: Compositional matrix adjust. Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 8/91 (8%) Query: 112 PPHVPVPELSTDTVINVITNMTTTIQSLFPNLQVFPALGNHDYWPQDQLPVVTSKVYNAV 171 PPH+P L D INV T+ + + Q+ PA+ + + +PVV + + Sbjct: 28 PPHLPALFLDRDGTINVDTDYPSDPAEIVLRPQMLPAIATAN---RAGIPVVVVTNQSGI 84 Query: 172 ANLWKPW-----LDEEAISTLRKGGFYSQKV 197 A + W ++ + LR+ G + V Sbjct: 85 ARGYFGWSAFAAVNGRVLELLREEGVFVDMV 115 >3PS0-A nrPDB Length = 328 Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust. Identities = 12/33 (36%), Positives = 22/33 (66%) Query: 281 KYSDVIAGQFYGHTHRDSIMVLSDKKGSPVNSL 313 +Y VI+G+ H ++ S++ ++ K+G PV SL Sbjct: 50 RYVPVISGEALAHAYQASLVDIAKKEGLPVGSL 82 >2NV5-A nrPDB Length = 299 Score = 28.1 bits (61), Expect = 7.6, Method: Compositional matrix adjust. Identities = 22/88 (25%), Positives = 37/88 (42%), Gaps = 3/88 (3%) Query: 202 NLRIISLNTNLYYGPNIMTLNKTDPANQFEWLESTLNNSQQNKEKVYIIAHVPVGYLPSS 261 ++ + N NL + ++ DP QF W S L ++ +IA+ L S+ Sbjct: 17 HIERLKANDNLKFSQEYESI---DPGQQFTWEHSNLEVNKPKNRYANVIAYDHSRVLLSA 73 Query: 262 QNITAMREYYNEKLIDIFQKYSDVIAGQ 289 +Y N ID ++K + IA Q Sbjct: 74 IEGIPGSDYVNANYIDGYRKQNAYIATQ 101 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5EBE-A nrPDB 701 0.0 5FCB-A nrPDB 694 0.0 5KAR-A nrPDB 634 0.0 5FI9-A nrPDB 561 e-160 5I81-A nrPDB 556 e-159 5HQN-A nrPDB 551 e-157 Sequences not found previously or not previously below threshold: 2NXF-A nrPDB 39 0.004 5TUJ-C nrPDB 37 0.013 2NV5-A nrPDB 32 0.48 1LAR-A nrPDB 30 2.0 4HOX-A nrPDB 30 2.2 2L21-A nrPDB 30 2.7 6DHT-A nrPDB 29 4.5 CONVERGED! >5EBE-A nrPDB Length = 418 Score = 701 bits (1810), Expect = 0.0, Method: Composition-based stats. Identities = 418/418 (100%), Positives = 418/418 (100%) Query: 33 PPPAIGQFWHVTDLHLDPTYHITDDHTKVCASSKGANASNPGPFGDVLCDSPYQLILSAF 92 PPPAIGQFWHVTDLHLDPTYHITDDHTKVCASSKGANASNPGPFGDVLCDSPYQLILSAF Sbjct: 1 PPPAIGQFWHVTDLHLDPTYHITDDHTKVCASSKGANASNPGPFGDVLCDSPYQLILSAF 60 Query: 93 DFIKNSGQEASFMIWTGDSPPHVPVPELSTDTVINVITNMTTTIQSLFPNLQVFPALGNH 152 DFIKNSGQEASFMIWTGDSPPHVPVPELSTDTVINVITNMTTTIQSLFPNLQVFPALGNH Sbjct: 61 DFIKNSGQEASFMIWTGDSPPHVPVPELSTDTVINVITNMTTTIQSLFPNLQVFPALGNH 120 Query: 153 DYWPQDQLPVVTSKVYNAVANLWKPWLDEEAISTLRKGGFYSQKVTTNPNLRIISLNTNL 212 DYWPQDQLPVVTSKVYNAVANLWKPWLDEEAISTLRKGGFYSQKVTTNPNLRIISLNTNL Sbjct: 121 DYWPQDQLPVVTSKVYNAVANLWKPWLDEEAISTLRKGGFYSQKVTTNPNLRIISLNTNL 180 Query: 213 YYGPNIMTLNKTDPANQFEWLESTLNNSQQNKEKVYIIAHVPVGYLPSSQNITAMREYYN 272 YYGPNIMTLNKTDPANQFEWLESTLNNSQQNKEKVYIIAHVPVGYLPSSQNITAMREYYN Sbjct: 181 YYGPNIMTLNKTDPANQFEWLESTLNNSQQNKEKVYIIAHVPVGYLPSSQNITAMREYYN 240 Query: 273 EKLIDIFQKYSDVIAGQFYGHTHRDSIMVLSDKKGSPVNSLFVAPAVTPVKSVLEKQTNN 332 EKLIDIFQKYSDVIAGQFYGHTHRDSIMVLSDKKGSPVNSLFVAPAVTPVKSVLEKQTNN Sbjct: 241 EKLIDIFQKYSDVIAGQFYGHTHRDSIMVLSDKKGSPVNSLFVAPAVTPVKSVLEKQTNN 300 Query: 333 PGIRLFQYDPRDYKLLDMLQYYLNLTEANLKGESIWKLEYILTQTYDIEDLQPESLYGLA 392 PGIRLFQYDPRDYKLLDMLQYYLNLTEANLKGESIWKLEYILTQTYDIEDLQPESLYGLA Sbjct: 301 PGIRLFQYDPRDYKLLDMLQYYLNLTEANLKGESIWKLEYILTQTYDIEDLQPESLYGLA 360 Query: 393 KQFTILDSKQFIKYYNYFFVSYDSSVTCDKTCKAFQICAIMNLDNISYADCLKQLYIK 450 KQFTILDSKQFIKYYNYFFVSYDSSVTCDKTCKAFQICAIMNLDNISYADCLKQLYIK Sbjct: 361 KQFTILDSKQFIKYYNYFFVSYDSSVTCDKTCKAFQICAIMNLDNISYADCLKQLYIK 418 >5FCB-A nrPDB Length = 433 Score = 694 bits (1790), Expect = 0.0, Method: Composition-based stats. Identities = 346/424 (81%), Positives = 385/424 (90%), Gaps = 3/424 (0%) Query: 23 LPVAPAGGRNPPPAIGQFWHVTDLHLDPTYHITDDHTKVCASSKGANASNPGPFGDVLCD 82 +P+APA + PA+GQFWHVTDLHLDPTYHITDD TKVCASSKGANASNPGPFGDVLCD Sbjct: 11 VPLAPA---DRAPAVGQFWHVTDLHLDPTYHITDDRTKVCASSKGANASNPGPFGDVLCD 67 Query: 83 SPYQLILSAFDFIKNSGQEASFMIWTGDSPPHVPVPELSTDTVINVITNMTTTIQSLFPN 142 SPYQLILSAFDFIKNSGQEASFMIWTGDSPPHVPVPELST TVI VITNMT T+Q+LFPN Sbjct: 68 SPYQLILSAFDFIKNSGQEASFMIWTGDSPPHVPVPELSTGTVIKVITNMTMTVQNLFPN 127 Query: 143 LQVFPALGNHDYWPQDQLPVVTSKVYNAVANLWKPWLDEEAISTLRKGGFYSQKVTTNPN 202 LQVFPALGNHDYWPQDQLP+VTSKVY+AVA+LWKPWL EEAISTL+KGGFYSQKV +NP Sbjct: 128 LQVFPALGNHDYWPQDQLPIVTSKVYSAVADLWKPWLGEEAISTLKKGGFYSQKVASNPG 187 Query: 203 LRIISLNTNLYYGPNIMTLNKTDPANQFEWLESTLNNSQQNKEKVYIIAHVPVGYLPSSQ 262 LRIISLNTNLYYGPNIMTLNKTDPANQFEWLE+TLN+S NKEKVYIIAHVPVGYLP + Sbjct: 188 LRIISLNTNLYYGPNIMTLNKTDPANQFEWLENTLNSSLWNKEKVYIIAHVPVGYLPYAT 247 Query: 263 NITAMREYYNEKLIDIFQKYSDVIAGQFYGHTHRDSIMVLSDKKGSPVNSLFVAPAVTPV 322 + A+R+YYNEKL+DIF++YS VIAGQFYGHTHRDS+MVLSDK G+P+NS+FVAPAVTPV Sbjct: 248 DTPAIRQYYNEKLLDIFRRYSSVIAGQFYGHTHRDSLMVLSDKNGNPLNSVFVAPAVTPV 307 Query: 323 KSVLEKQTNNPGIRLFQYDPRDYKLLDMLQYYLNLTEANLKGESIWKLEYILTQTYDIED 382 K VL+K+TNNPG+RLFQY P DY LLDM+QYYLNLTEANLKGES W LEY+LTQ Y + D Sbjct: 308 KGVLQKETNNPGVRLFQYKPGDYTLLDMVQYYLNLTEANLKGESNWTLEYVLTQAYSVAD 367 Query: 383 LQPESLYGLAKQFTILDSKQFIKYYNYFFVSYDSSVTCDKTCKAFQICAIMNLDNISYAD 442 LQP+SLY L +QF DSKQF+KYY+Y+FVSYDSS TCD+ CK Q+CAIMNLD++SY D Sbjct: 368 LQPKSLYALVQQFATKDSKQFLKYYHYYFVSYDSSATCDQHCKTLQVCAIMNLDSMSYDD 427 Query: 443 CLKQ 446 CLKQ Sbjct: 428 CLKQ 431 >5KAR-A nrPDB Length = 427 Score = 634 bits (1635), Expect = 0.0, Method: Composition-based stats. Identities = 170/420 (40%), Positives = 254/420 (60%), Gaps = 10/420 (2%) Query: 37 IGQFWHVTDLHLDPTYHITDDHTKVCASSKGANASNPGPFGDVLCDSPYQLILSAFDFIK 96 +G+FWH++DLHLDP Y ++ D +VC S+ N GP+GD LCDSP+ LI S+ +K Sbjct: 12 LGRFWHISDLHLDPNYTVSKDPLQVCPSAGSQPVLNAGPWGDYLCDSPWALINSSLYAMK 71 Query: 97 NSGQEASFMIWTGDSPPHVPVPELSTDTVINVITNMTTTIQSLFPNLQVFPALGNHDYWP 156 + F++WTGD PHVP L V+ ++ +T I+ +FP+ +V+ ALGNHD+ P Sbjct: 72 EIEPKPDFILWTGDDTPHVPNESLGEAAVLAIVERLTNLIKEVFPDTKVYAALGNHDFHP 131 Query: 157 QDQLPVVTSKVYNAVANLWKPWLDEEAISTLRKGGFYSQKVTTNPNL-RIISLNTNLYYG 215 ++Q P ++++YN VA LW+PWL E+ + ++G FYS+K+ R++ LNTNLYY Sbjct: 132 KNQFPAQSNRIYNQVAELWRPWLSNESYALFKRGAFYSEKLPGPSRAGRVVVLNTNLYYS 191 Query: 216 PNIMTLNKTDPANQFEWLESTLNNSQQNKEKVYIIAHVPVGYLPSSQNITAMREYYNEKL 275 N T DP QF WL L+N+ ++ E VY+I HVP G+ +QN RE +NE+ Sbjct: 192 NNEQTAGMADPGEQFRWLGDVLSNASRDGEMVYVIGHVPPGFFEKTQNKAWFRESFNEEY 251 Query: 276 IDIFQKYSDVIAGQFYGHTHRDSIMVLSDKKGSPVNSLFVAPAVTPVKSVLE---KQTNN 332 + + QK+ VIAGQF+GH H DS + D G+P+N +F+ P VTP K+ L NN Sbjct: 252 LKVIQKHHRVIAGQFFGHHHTDSFRMFYDNTGAPINVMFLTPGVTPWKTTLPGVVDGANN 311 Query: 333 PGIRLFQYDPRDYKLLDMLQYYLNLTEANLKGESIWKLEYILTQTYDIEDLQPESLYGLA 392 PGIR+F+YD L D++ Y+LNL +AN++ W+ EY LT+ Y + D S++ Sbjct: 312 PGIRIFEYDRATLNLKDLVTYFLNLRQANVQETPRWEQEYRLTEAYQVPDASVSSMH--- 368 Query: 393 KQFTILDSKQF--IKYYNYFFVSYDSSVTCDKTCKAFQICAIMNLDNISYADCLKQLYIK 450 T + S+ +YY Y VSY+ +TC+ +C+ +CAI ++ +YA CL L K Sbjct: 369 TALTRIASEPHILQRYYVYNSVSYN-HLTCEDSCRIEHVCAIQHVAFNTYATCLHGLGAK 427 >5FI9-A nrPDB Length = 538 Score = 561 bits (1446), Expect = e-160, Method: Composition-based stats. Identities = 129/426 (30%), Positives = 199/426 (46%), Gaps = 43/426 (10%) Query: 43 VTDLHLDPTY-HITDDHTK---VCASSKG---ANASNPGPFGDV-LCDSPYQLILSAFDF 94 +TDLH D Y TD + C G + G +G+ CD P + + S Sbjct: 129 LTDLHWDHEYLEGTDPYCADPLCCRRGSGWPPNSQKGAGFWGEYSKCDLPLRTLESLLKG 188 Query: 95 IKNSGQEASFMIWTGDSPPHVPVPELSTDTVINVITNMTTTIQSLFPNLQVFPALGNHDY 154 + +G + WTGD P H V + S + +T +T ++ + V+PA+GNH+ Sbjct: 189 LGPAGP-FEMVYWTGDIPAH-DVWQQSRQDQLRALTTITDLVRKFLGPVPVYPAVGNHES 246 Query: 155 WPQDQLPVV-------TSKVYNAVANLWKPWLDEEAISTLRKGGFYSQKVTTNPNLRIIS 207 P + P + +Y A+A W+PWL +A+ TLR GGFY+ +T P LR+IS Sbjct: 247 TPVNGFPPPFIKGNQSSQWLYEAMAKAWEPWLPADALHTLRIGGFYA--LTPRPGLRLIS 304 Query: 208 LNTNLYYGPNI-MTLNKTDPANQFEWLESTLNNSQQNKEKVYIIAHVPVGYLPSSQNITA 266 LN N N + +N TDPA Q +WL L ++ +KV+II H+P G+ S + Sbjct: 305 LNMNFCSRENFWLLINSTDPAGQLQWLVEELQAAENRGDKVHIIGHIPPGHCLKSWSWNY 364 Query: 267 MREYYNEKLIDIFQKYSDVIAGQFYGHTHRDSIMVLSDKK--GSPVNSLFVAPAVTPVKS 324 I +Y + +AGQF+GHTH D + D++ P+ F+AP+ T + Sbjct: 365 Y---------KIIARYENTLAGQFFGHTHVDEFEIFYDEETLSRPLAVAFLAPSATTFIN 415 Query: 325 VLEKQTNNPGIRLFQ----YDPRDYKLLDMLQYYLNLTEANLKGE-SIWKLEYILTQTYD 379 + NPG R++Q Y + +LD Y LNLT+AN G WK Y +TY Sbjct: 416 L------NPGYRVYQIDGNYPGSSHVVLDHETYILNLTQANAAGGTPSWKRLYRARETYG 469 Query: 380 IEDLQPESLYGLAKQFTILDSKQFIKYYNYFFVSYDSSVTCDKTCKAFQICAIMNLDNIS 439 + D P S + L + D + F ++ + + S C C+ +CA ++ S Sbjct: 470 LPDAMPASWHNLVYRMRD-DEQLFQTFWFLYHKGHPPSEPCGTPCRLATLCAQLSARADS 528 Query: 440 YADCLK 445 A C Sbjct: 529 PALCRH 534 >5I81-A nrPDB Length = 583 Score = 556 bits (1432), Expect = e-159, Method: Composition-based stats. Identities = 130/430 (30%), Positives = 203/430 (47%), Gaps = 43/430 (10%) Query: 39 QFWHVTDLHLDPTY-HITD-DHTKVCASSKGA---NASNPGP--FGDV-LCDSPYQLILS 90 + +TDLH D Y TD D +G+ AS PG +G+ CD P + + S Sbjct: 154 RILFLTDLHWDHDYLEGTDPDCADPLCCRRGSGLPPASRPGAGYWGEYSKCDLPLRTLES 213 Query: 91 AFDFIKNSGQEASFMIWTGDSPPHVPVPELSTDTVINVITNMTTTIQSLFPNLQVFPALG 150 + +G + WTGD P H + D + +T +T ++ + V+PA+G Sbjct: 214 LLSGLGPAGP-FDMVYWTGDIPAHDVWHQTRQDQ-LRALTTVTALVRKFLGPVPVYPAVG 271 Query: 151 NHDYWPQDQLPVV-------TSKVYNAVANLWKPWLDEEAISTLRKGGFYSQKVTTNPNL 203 NH+ P + P + +Y A+A W+PWL EA+ TLR GGFY+ ++ P L Sbjct: 272 NHESTPVNSFPPPFIEGNHSSRWLYEAMAKAWEPWLPAEALRTLRIGGFYA--LSPYPGL 329 Query: 204 RIISLNTNLYYGPNI-MTLNKTDPANQFEWLESTLNNSQQNKEKVYIIAHVPVGYLPSSQ 262 R+ISLN N N + +N TDPA Q +WL L ++ +KV+II H+P G+ S Sbjct: 330 RLISLNMNFCSRENFWLLINSTDPAGQLQWLVGELQAAEDRGDKVHIIGHIPPGHCLKSW 389 Query: 263 NITAMREYYNEKLIDIFQKYSDVIAGQFYGHTHRDSIMVLSDKK--GSPVNSLFVAPAVT 320 + R I +Y + +A QF+GHTH D V D++ P+ F+AP+ T Sbjct: 390 SWNYYR---------IVARYENTLAAQFFGHTHVDEFEVFYDEETLSRPLAVAFLAPSAT 440 Query: 321 PVKSVLEKQTNNPGIRLFQ----YDPRDYKLLDMLQYYLNLTEANLKGE-SIWKLEYILT 375 + NPG R++Q Y + +LD Y LNLT+AN+ G W+L Y Sbjct: 441 TYIGL------NPGYRVYQIDGNYSGSSHVVLDHETYILNLTQANIPGAIPHWQLLYRAR 494 Query: 376 QTYDIEDLQPESLYGLAKQFTILDSKQFIKYYNYFFVSYDSSVTCDKTCKAFQICAIMNL 435 +TY + + P + + L + D + F ++ + + S C C+ +CA ++ Sbjct: 495 ETYGLPNTLPTAWHNLVYRMRG-DMQLFQTFWFLYHKGHPPSEPCGTPCRLATLCAQLSA 553 Query: 436 DNISYADCLK 445 S A C Sbjct: 554 RADSPALCRH 563 >5HQN-A nrPDB Length = 473 Score = 551 bits (1420), Expect = e-157, Method: Composition-based stats. Identities = 129/426 (30%), Positives = 199/426 (46%), Gaps = 43/426 (10%) Query: 43 VTDLHLDPTY-HITDDHTK---VCASSKG---ANASNPGPFGDV-LCDSPYQLILSAFDF 94 +TDLH D Y TD + C G + G +G+ CD P + + S Sbjct: 48 LTDLHWDHEYLEGTDPYCADPLCCRRGSGWPPNSQKGAGFWGEYSKCDLPLRTLESLLKG 107 Query: 95 IKNSGQEASFMIWTGDSPPHVPVPELSTDTVINVITNMTTTIQSLFPNLQVFPALGNHDY 154 + +G + WTGD P H V + S + +T +T ++ + V+PA+GNH+ Sbjct: 108 LGPAGP-FEMVYWTGDIPAH-DVWQQSRQDQLRALTTITDLVRKFLGPVPVYPAVGNHES 165 Query: 155 WPQDQLPVV-------TSKVYNAVANLWKPWLDEEAISTLRKGGFYSQKVTTNPNLRIIS 207 P + P + +Y A+A W+PWL +A+ TLR GGFY+ +T P LR+IS Sbjct: 166 TPVNGFPPPFIKGNQSSQWLYEAMAKAWEPWLPADALHTLRIGGFYA--LTPRPGLRLIS 223 Query: 208 LNTNLYYGPNI-MTLNKTDPANQFEWLESTLNNSQQNKEKVYIIAHVPVGYLPSSQNITA 266 LN N N + +N TDPA Q +WL L ++ +KV+II H+P G+ S + Sbjct: 224 LNMNFCSRENFWLLINSTDPAGQLQWLVEELQAAENRGDKVHIIGHIPPGHCLKSWSWNY 283 Query: 267 MREYYNEKLIDIFQKYSDVIAGQFYGHTHRDSIMVLSDKK--GSPVNSLFVAPAVTPVKS 324 I +Y + +AGQF+GHTH D + D++ P+ F+AP+ T + Sbjct: 284 Y---------KIIARYENTLAGQFFGHTHVDEFEIFYDEETLSRPLAVAFLAPSATTFIN 334 Query: 325 VLEKQTNNPGIRLFQ----YDPRDYKLLDMLQYYLNLTEANLKGE-SIWKLEYILTQTYD 379 + NPG R++Q Y + +LD Y LNLT+AN G WK Y +TY Sbjct: 335 L------NPGYRVYQIDGNYPGSSHVVLDHETYILNLTQANAAGGTPSWKRLYRARETYG 388 Query: 380 IEDLQPESLYGLAKQFTILDSKQFIKYYNYFFVSYDSSVTCDKTCKAFQICAIMNLDNIS 439 + D P S + L + D + F ++ + + S C C+ +CA ++ S Sbjct: 389 LPDAMPASWHNLVYRMRD-DEQLFQTFWFLYHKGHPPSEPCGTPCRLATLCAQLSARADS 447 Query: 440 YADCLK 445 A C Sbjct: 448 PALCRH 453 >2NXF-A nrPDB Length = 322 Score = 39.0 bits (89), Expect = 0.004, Method: Composition-based stats. Identities = 37/227 (16%), Positives = 74/227 (32%), Gaps = 58/227 (25%) Query: 109 GDSPPHVPVPELSTDTVINVITNMTTTIQSLFPNLQVFPALGNHDYWPQDQLPVVTSKVY 168 GD + D + + + + ++ V GNH+++ + +++S++ Sbjct: 59 GDI---IDGHNRRRDASDRALDTVMAELDAC--SVDVHHVWGNHEFYNFSRPSLLSSRLN 113 Query: 169 NAVANLWKPWLDEEAISTLRKGGFYSQKVTTNPNLRIISL-------------------- 208 +A + S L Y+ + + PN R + L Sbjct: 114 SAQRT------GTDTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESEKHTHS 167 Query: 209 -------NTNLY----------YGPNIMTLNKTDPANQFEWLESTLNNSQQNKEKVYIIA 251 N NL + N Q +WL++ L S +E+V I + Sbjct: 168 WRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQERVLIFS 227 Query: 252 HVPVGYL---PSSQNITAMREYYNEKLIDIFQKYSDVIAGQFYGHTH 295 H+PV P +E ++ + + + V+ GH H Sbjct: 228 HLPVHPCAADPICLAWN------HEAVLSVLRSHQSVLCF-IAGHDH 267 >5TUJ-C nrPDB Length = 235 Score = 37.4 bits (85), Expect = 0.013, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 50/114 (43%), Gaps = 10/114 (8%) Query: 141 PNLQVFPALGN-HDYWPQDQLPVVTSKVYNAVANLWKPWLDEEAISTLR---KGGFYSQK 196 P+++V LG + ++ LP + + A ++ + A + + +Y++K Sbjct: 121 PDVKVAVQLGTTSEQAAKEFLPKAKIRTFENNAEAFQEVVSGRADAMVTDSPVAAYYAKK 180 Query: 197 VTTNPNLRIISLNTNLYYGPNIMTLNKTDPANQFEWLESTLNNSQQNK--EKVY 248 NP L ++ ++ + P + K DP W+ + L +++ +K+Y Sbjct: 181 ---NPGLAVVVVDEPFTHEPLGFAIRKGDP-ELLNWVNNWLKQMKKDGTYDKLY 230 >2NV5-A nrPDB Length = 299 Score = 32.0 bits (71), Expect = 0.48, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 44/106 (41%), Gaps = 4/106 (3%) Query: 209 NTNLYYGPNIMTLNKTDPANQFEWLESTLNNSQQNKEKVYIIAHVPVGYLPSSQNITAMR 268 N NL + ++ DP QF W S L ++ +IA+ L S+ Sbjct: 24 NDNLKFSQEYESI---DPGQQFTWEHSNLEVNKPKNRYANVIAYDHSRVLLSAIEGIPGS 80 Query: 269 EYYNEKLIDIFQKYSDVIAGQ-FYGHTHRDSIMVLSDKKGSPVNSL 313 +Y N ID ++K + IA Q T D ++ +++ + V + Sbjct: 81 DYVNANYIDGYRKQNAYIATQGSLPETFGDFWRMIWEQRSATVVMM 126 >1LAR-A nrPDB Length = 575 Score = 30.1 bits (66), Expect = 2.0, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 29/67 (43%) Query: 223 KTDPANQFEWLESTLNNSQQNKEKVYIIAHVPVGYLPSSQNITAMREYYNEKLIDIFQKY 282 DP QF W S L ++ +IA+ + +S + +Y N ID ++K Sbjct: 26 SIDPGQQFTWENSNLEVNKPKNRYANVIAYDHSRVILTSIDGVPGSDYINANYIDGYRKQ 85 Query: 283 SDVIAGQ 289 + IA Q Sbjct: 86 NAYIATQ 92 >4HOX-A nrPDB Length = 559 Score = 30.1 bits (66), Expect = 2.2, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 23/58 (39%), Gaps = 1/58 (1%) Query: 257 YLPSSQNITAMREYYNEKLIDIFQKYSDVIAGQFYGHTHRDSIMVLSDKKGSPVNSLF 314 + + +Y NE ++ Y AG+ +G D + D++ + +N F Sbjct: 222 FAEEYTKGPKIHDYVNEMNREVLSHYDIATAGEIFG-VPLDKSIKFFDRRRNELNIAF 278 >2L21-A nrPDB Length = 154 Score = 29.7 bits (65), Expect = 2.7, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 5/45 (11%) Query: 35 PAIGQFWHVTDLHLDPTYHITDDH-----TKVCASSKGANASNPG 74 PA G + +T L + Y ITD H VCA +K + A+ Sbjct: 14 PATGHLFDLTSLKRESGYTITDSHNRKIELNVCAEAKSSCANGAA 58 >6DHT-A nrPDB Length = 569 Score = 29.0 bits (63), Expect = 4.5, Method: Composition-based stats. Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%) Query: 260 SSQNITAMREYYNEKLIDIFQKYSDVIAGQFYGHTHRDS 298 + YYN+ L++ QKY IA YG TH D Sbjct: 304 YAWAEKHPEAYYNQNLLN--QKYQPAIATGEYGDTHADD 340 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.306 0.127 0.375 Lambda K H 0.267 0.0398 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 18,270,504 Number of Sequences: 36641 Number of extensions: 741739 Number of successful extensions: 2001 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 19 Number of HSP's successfully gapped in prelim test: 12 Number of HSP's that attempted gapping in prelim test: 1917 Number of HSP's gapped (non-prelim): 31 length of query: 453 length of database: 10,336,785 effective HSP length: 100 effective length of query: 353 effective length of database: 6,672,685 effective search space: 2355457805 effective search space used: 2355457805 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 61 (28.1 bits)