BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q92383 (228 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 3S6I-A nrPDB 473 e-134 4B24-A nrPDB 177 4e-45 2H56-A nrPDB 113 8e-26 2YG8-A nrPDB 92 2e-19 2JHN-A nrPDB 62 2e-10 3OH9-A nrPDB 60 9e-10 4EJY-A nrPDB 39 0.001 2ZPA-A nrPDB 35 0.038 3F10-A nrPDB 32 0.16 5DEP-A nrPDB 32 0.20 4YH2-A nrPDB 32 0.30 3ICK-A nrPDB 31 0.37 1GTM-A nrPDB 31 0.44 1ODO-A nrPDB 30 1.2 3AOE-E nrPDB 30 1.2 3IO7-A nrPDB 29 1.3 2W1I-A nrPDB 29 1.7 4RDI-A nrPDB 29 1.8 1BVU-A nrPDB 29 2.0 5Z6H-A nrPDB 28 2.5 1B26-A nrPDB 28 2.7 4UOB-A nrPDB 28 3.5 5DOQ-A nrPDB 28 4.4 3VDP-A nrPDB 27 6.1 4KK2-A nrPDB 27 8.1 >3S6I-A nrPDB Length = 228 Score = 473 bits (1216), Expect = e-134, Method: Compositional matrix adjust. Identities = 228/228 (100%), Positives = 228/228 (100%) Query: 1 MTLDIEEKEEIVTSLTKAEIHLSGLDENWKRLVKLVGNYRPNRSMEKKEPYEELIRAVAS 60 MTLDIEEKEEIVTSLTKAEIHLSGLDENWKRLVKLVGNYRPNRSMEKKEPYEELIRAVAS Sbjct: 1 MTLDIEEKEEIVTSLTKAEIHLSGLDENWKRLVKLVGNYRPNRSMEKKEPYEELIRAVAS 60 Query: 61 QQLHSKAANAIFNRFKSISNNGQFPTPEEIRDMDFEIMRACGFSARKIDSLKSIAEATIS 120 QQLHSKAANAIFNRFKSISNNGQFPTPEEIRDMDFEIMRACGFSARKIDSLKSIAEATIS Sbjct: 61 QQLHSKAANAIFNRFKSISNNGQFPTPEEIRDMDFEIMRACGFSARKIDSLKSIAEATIS 120 Query: 121 GLIPTKEEAERLSNEELIERLTQIKGIGRWTVEMLLIFSLNRDDVMPADDLSIRNGYRYL 180 GLIPTKEEAERLSNEELIERLTQIKGIGRWTVEMLLIFSLNRDDVMPADDLSIRNGYRYL Sbjct: 121 GLIPTKEEAERLSNEELIERLTQIKGIGRWTVEMLLIFSLNRDDVMPADDLSIRNGYRYL 180 Query: 181 HRLPKIPTKMYVLKHSEICAPFRTAAAWYLWKTSKLADYTKPVRPKKH 228 HRLPKIPTKMYVLKHSEICAPFRTAAAWYLWKTSKLADYTKPVRPKKH Sbjct: 181 HRLPKIPTKMYVLKHSEICAPFRTAAAWYLWKTSKLADYTKPVRPKKH 228 >4B24-A nrPDB Length = 232 Score = 177 bits (448), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 90/201 (44%), Positives = 126/201 (62%), Gaps = 2/201 (0%) Query: 17 KAEIHLSGLDENWKRLVKLVGNYRPNRSMEKKEPYEELIRAVASQQLHSKAANAIFNRFK 76 +AE HLS +D W LVK VG E PYE +IRA+ SQ+L A N+I N+F Sbjct: 28 RAEKHLSSIDNKWSSLVKKVGPCTLTPHPEHA-PYEGIIRAITSQKLSDAATNSIINKFC 86 Query: 77 S-ISNNGQFPTPEEIRDMDFEIMRACGFSARKIDSLKSIAEATISGLIPTKEEAERLSNE 135 + S+N +FPTP++I + D E + CGFS K + +AEA ++ IP+K E E++S E Sbjct: 87 TQCSDNDEFPTPKQIMETDVETLHECGFSKLKSQEIHIVAEAALNKQIPSKSEIEKMSEE 146 Query: 136 ELIERLTQIKGIGRWTVEMLLIFSLNRDDVMPADDLSIRNGYRYLHRLPKIPTKMYVLKH 195 EL+E L++IKG+ RWT+EM IF+L R D+MPADD +++N + L P V K Sbjct: 147 ELMESLSKIKGVKRWTIEMYSIFTLGRLDIMPADDSTLKNEAKEFFGLSSKPQTEEVEKL 206 Query: 196 SEICAPFRTAAAWYLWKTSKL 216 ++ C P+RT AAWYLW+ KL Sbjct: 207 TKPCKPYRTIAAWYLWQIPKL 227 >2H56-A nrPDB Length = 233 Score = 113 bits (282), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 59/168 (35%), Positives = 95/168 (56%), Gaps = 2/168 (1%) Query: 47 KKEPYEELIRAVASQQLHSKAANAIFNRFKSISNNGQFPTPEEIRDMDFEIMRACGFSAR 106 K P++ L+ ++ QQL KAA+AI+ R + + G PE++ + E +R G S R Sbjct: 48 KPNPFQSLVSSIVEQQLSIKAASAIYGRVEQLVG-GALEKPEQLYRVSDEALRQAGVSKR 106 Query: 107 KIDSLKSIAEATISGLIPTKEEAERLSNEELIERLTQIKGIGRWTVEMLLIFSLNRDDVM 166 KI+ ++ + E SG + E E +IE+LT IKGIG+WT EM ++FSL R DV+ Sbjct: 107 KIEYIRHVCEHVESGRLDFTE-LEGAEATTVIEKLTAIKGIGQWTAEMFMMFSLGRLDVL 165 Query: 167 PADDLSIRNGYRYLHRLPKIPTKMYVLKHSEICAPFRTAAAWYLWKTS 214 D+ ++ G ++L+ + K ++ H + AP+ T A YLWK + Sbjct: 166 SVGDVGLQRGAKWLYGNGEGDGKKLLIYHGKAWAPYETVACLYLWKAA 213 >2YG8-A nrPDB Length = 225 Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 56/166 (33%), Positives = 90/166 (54%), Gaps = 10/166 (6%) Query: 49 EPYEELIRAVASQQLHSKAANAIFNRFKSISNNGQFPTPEEIRDMDFEIMRACGFSARKI 108 +P+ L+R+VA QQL KAA AI+ R + + P + + + +R G S K+ Sbjct: 60 DPFGRLVRSVAGQQLSVKAAQAIYGRLEGLPGG---VVPAALLKVSGDDLRGVGLSWAKV 116 Query: 109 DSLKSIAEATISGLIPTKEEAERLSNEELIERLTQIKGIGRWTVEMLLIFSLNRDDVMPA 168 ++++ A A +SG I + + +E +I L Q+ GIGRWT EM L+F+L R DV + Sbjct: 117 RTVQAAAAAAVSGQIDFAHLSGQ-PDELVIAELVQLPGIGRWTAEMFLLFALARPDVFSS 175 Query: 169 DDLSIRNGYRYLHRLPKIPTKMYVLKHSEICAPFRTAAAWYLWKTS 214 DL++R G L+ P + + + AP+R+ A+ YLW S Sbjct: 176 GDLALRQGVERLY-----PGEDW-RDVTARWAPYRSLASRYLWANS 215 >2JHN-A nrPDB Length = 295 Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 50/140 (35%), Positives = 68/140 (48%), Gaps = 16/140 (11%) Query: 51 YEELIRAVASQQLH----SKAANAIFNRFKS-ISNNG----QFPTPEEIRDMDFEIMRAC 101 +E + +A+ QQ+ K A I RF + NG FPT E I E +R C Sbjct: 119 FEGIAKAIIQQQISFVVAEKLAAKIVGRFGDEVEWNGLKFYGFPTQEAILKAGVEGLREC 178 Query: 102 GFSARKIDSLKSIAEATISGLIPTKEEAERLSNEELIERLTQIKGIGRWTVEMLLIFSLN 161 G S RK + + IA+ EE + EE E LT KGIGRWT E++L +L Sbjct: 179 GLSRRKAELIVEIAKEE------NLEELKEWGEEEAYEYLTSFKGIGRWTAELVLSIALG 232 Query: 162 RDDVMPADDLSIRNGYRYLH 181 + +V PADDL +R L+ Sbjct: 233 K-NVFPADDLGVRRAVSRLY 251 >3OH9-A nrPDB Length = 289 Score = 59.7 bits (143), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 44/187 (23%), Positives = 81/187 (43%), Gaps = 19/187 (10%) Query: 36 VGNYRPNRSMEKK-EPYEELIRAVASQ--------QLHSKAANAIFNRFKSISNNGQFPT 86 +G RP + + +E+ +RA+ Q +L ++ A R FPT Sbjct: 105 LGAARPGLRLPGCVDAFEQGVRAILGQLVSVAMAAKLTARVAQLYGERLDDFPEYICFPT 164 Query: 87 PEEIRDMDFEIMRACGFSARKIDSLKSIAEATISGLIPTKEEAERLSNEELIERLTQIKG 146 P+ + D + ++A G ++ ++L +A A + G +P + E+ ++ L G Sbjct: 165 PQRLAAADPQALKALGMPLKRAEALIHLANAALEGTLPMTIPGD---VEQAMKTLQTFPG 221 Query: 147 IGRWTVEMLLIFSLNRDDVMPADDLSIRNGYRYLHRLPKIPTKMYVLKHSEICAPFRTAA 206 IGRWT + DV DD I+ R P + T + +++E P+R+ A Sbjct: 222 IGRWTANYFALRGWQAKDVFLPDDCLIK------QRFPGM-TPAQIRRYAERWKPWRSYA 274 Query: 207 AWYLWKT 213 ++W T Sbjct: 275 LLHIWYT 281 >4EJY-A nrPDB Length = 311 Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 8/89 (8%) Query: 84 FPTPEEIRDMDFEIMRA--CGFSARKI-DSLKSIAEATISGLIPTKEEAERLSNEELIER 140 FP PEE+ D E + CGF A+ I D+ + I+ L + S E+ + Sbjct: 171 FPKPEELVMYDVETIAKTRCGFRAKYIFDAASKVFSGEINLL-----KLHEYSTSEIRDI 225 Query: 141 LTQIKGIGRWTVEMLLIFSLNRDDVMPAD 169 L I G+G + ++++S+ R D P D Sbjct: 226 LMTINGVGPKVADCVILYSIGRYDTFPTD 254 >2ZPA-A nrPDB Length = 671 Score = 34.7 bits (78), Expect = 0.038, Method: Compositional matrix adjust. Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 5/105 (4%) Query: 101 CGFSARKIDSLKSIAEA--TISGLIPTKEEAERLSNEELIERLTQIKGIGRWTVEMLLIF 158 CGF ++ + + + T L+P + ++L+ E + + +W E L + Sbjct: 507 CGFVLVRMGNHREASSGCYTAMALLPMSDAGKQLAEREHYRLRRDAQALAQWNGETLPVD 566 Query: 159 SLNRDDVMPADDLSIRNGYRYLHR--LPKIPTKMYVLKHSEICAP 201 LN D V+ DD G+ + HR L + + +L+ SE+ P Sbjct: 567 PLN-DAVLSDDDWLELAGFAFAHRPLLTSLGCLLRLLQTSELALP 610 >3F10-A nrPDB Length = 292 Score = 32.3 bits (72), Expect = 0.16, Method: Compositional matrix adjust. Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 8/89 (8%) Query: 84 FPTPEEIRDM---DFEIMRACGFSARKIDSLKSIAEATISGLIPTKEEAERLSNEELIER 140 FPT +++ + DFE A GF A+ LK + +G + E + L++ E E Sbjct: 158 FPTVDKLHEFTEKDFEECTA-GFRAK---YLKDTVDRIYNGELNL-EYIKSLNDNECHEE 212 Query: 141 LTQIKGIGRWTVEMLLIFSLNRDDVMPAD 169 L + G+G + +++FS+ + P D Sbjct: 213 LKKFMGVGPQVADCIMLFSMQKYSAFPVD 241 >5DEP-A nrPDB Length = 258 Score = 32.0 bits (71), Expect = 0.20, Method: Compositional matrix adjust. Identities = 14/29 (48%), Positives = 18/29 (62%) Query: 84 FPTPEEIRDMDFEIMRACGFSARKIDSLK 112 F P E R M+FE MR GFS+ I +L+ Sbjct: 184 FGNPAEARSMNFEGMRRRGFSSEAIHALR 212 >4YH2-A nrPDB Length = 222 Score = 31.6 bits (70), Expect = 0.30, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 7/67 (10%) Query: 35 LVGNYRPNRSMEKKEPYEELIRAVASQQLHSKAANAIFNRFKSISNN----GQFPTPEEI 90 LV Y + ++ K+P L RAV Q+LH ++ N +SIS + GQ P+E Sbjct: 75 LVSKYADSDALYPKDP---LKRAVVDQRLHFESGVVFANGIRSISKSVLFQGQTKVPKER 131 Query: 91 RDMDFEI 97 D EI Sbjct: 132 YDAIIEI 138 >3ICK-A nrPDB Length = 362 Score = 31.2 bits (69), Expect = 0.37, Method: Compositional matrix adjust. Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 2/56 (3%) Query: 134 NEELIERLTQIKGIGRWTVEMLLIFSLNRDDVMPADDLSIRNGYRYLHRLPKIPTK 189 +E ER+ +G W +E L L DD+M D +R G +R P + T+ Sbjct: 69 DEATKERILHDACVGGWMIEFLQAHYLVEDDIM--DGSVMRRGKPCWYRFPGVTTQ 122 >1GTM-A nrPDB Length = 419 Score = 30.8 bits (68), Expect = 0.44, Method: Compositional matrix adjust. Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 3/51 (5%) Query: 169 DDLSIR--NGYRYLHRLPKIPTKMYVLKH-SEICAPFRTAAAWYLWKTSKL 216 DD S++ G+R H + PTK + H E + + AAW WKT+ + Sbjct: 46 DDGSVKVFTGFRVQHNWARGPTKGGIRWHPEETLSTVKALAAWMTWKTAVM 96 >1ODO-A nrPDB Length = 408 Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust. Identities = 10/24 (41%), Positives = 18/24 (75%) Query: 100 ACGFSARKIDSLKSIAEATISGLI 123 A FSAR++D+++ EA ++GL+ Sbjct: 103 APAFSARRVDAMRPAVEAMVTGLV 126 >3AOE-E nrPDB Length = 419 Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust. Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 6/91 (6%) Query: 136 ELIERLTQIKGIGRWTVEMLL----IFSLNRDDVMPADDLSIRNGYRYLHRLPKIPTKMY 191 E +ER ++ G+ T+E L + +L+ VM + I GYR +H + + P K Sbjct: 20 EWLERALKVAGVHPTTLEYLAHPKRLVTLSLPVVMDDGKVRIFQGYRVVHDIARGPAKGG 79 Query: 192 VLKHSEICAPFRTAAAWYLWKTSKLADYTKP 222 V + A W T K A Y P Sbjct: 80 VRLDPGVT--LGQTAGLAAWMTLKAAVYDLP 108 >3IO7-A nrPDB Length = 313 Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust. Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 3/54 (5%) Query: 48 KEPYEELIRAVASQQLHSKAANAIFNRFKSISNNGQFPTPEEIRDMDFEIMRAC 101 K P E +R + + + + +F+ + + NNG+ P P+ D + IM C Sbjct: 236 KSPPAEFMRMIGNDK---QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTEC 286 >2W1I-A nrPDB Length = 326 Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust. Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 3/54 (5%) Query: 48 KEPYEELIRAVASQQLHSKAANAIFNRFKSISNNGQFPTPEEIRDMDFEIMRAC 101 K P E +R + + + + +F+ + + NNG+ P P+ D + IM C Sbjct: 249 KSPPAEFMRMIGNDK---QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTEC 299 >4RDI-A nrPDB Length = 288 Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust. Identities = 12/43 (27%), Positives = 20/43 (46%) Query: 141 LTQIKGIGRWTVEMLLIFSLNRDDVMPADDLSIRNGYRYLHRL 183 + I G+G W E L + ++ DD+ + N R +H L Sbjct: 55 VVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHAL 97 >1BVU-A nrPDB Length = 418 Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust. Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 3/51 (5%) Query: 169 DDLSIR--NGYRYLHRLPKIPTKMYVLKH-SEICAPFRTAAAWYLWKTSKL 216 DD S++ G+R + + PTK + H E + + AAW WKT+ + Sbjct: 46 DDGSVKVFTGFRVQYNWARGPTKGGIRWHPEETLSTVKALAAWMTWKTAVM 96 >5Z6H-A nrPDB Length = 563 Score = 28.5 bits (62), Expect = 2.5, Method: Compositional matrix adjust. Identities = 29/129 (22%), Positives = 49/129 (37%), Gaps = 23/129 (17%) Query: 39 YRPNRSMEKKEPY-----EELIRAVASQQLHSKAANAIFNRF----------------KS 77 YRP MEK+ Y + L A++++ AI NR+ + Sbjct: 237 YRPQ--MEKEYAYWMDGVDALQPGQANKRVVKLDDGAILNRYWDDRDTPRPESWLDDVNT 294 Query: 78 ISNNGQFPTPEEIRDMDFEIMRACGFSARKIDSLKSIAEATISGLIPTKEEAERLSNEEL 137 +N P E RD+ FS+R +D + + + ++P A E+L Sbjct: 295 AKSNPNRPATEIYRDLRSAAASGWDFSSRWMDDPQKLGTIRTTSIVPVDLNALMFKMEKL 354 Query: 138 IERLTQIKG 146 + R +Q G Sbjct: 355 LARASQESG 363 >1B26-A nrPDB Length = 416 Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust. Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 5/64 (7%) Query: 154 MLLIFSLNRDDVMPADDLSIRNGYRYLHRLPKIPTKMYVLKHSEICAP-FRTAAAWYLWK 212 +++ F + DD + + GYR H + + P K + H ++ + A W WK Sbjct: 38 LIVEFPVRMDD----GHVEVFTGYRVQHNVARGPAKGGIRYHPDVTLDEVKALAFWMTWK 93 Query: 213 TSKL 216 T+ + Sbjct: 94 TAVM 97 >4UOB-A nrPDB Length = 278 Score = 28.1 bits (61), Expect = 3.5, Method: Compositional matrix adjust. Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Query: 133 SNEELIERLTQIKGIGRWTVEMLLIFSLNRDDVMPAD 169 +E+ + L + G+G TV ++L+F L R MP D Sbjct: 154 GHEQARQALAALPGVGHKTVALVLLFDLRR-PAMPVD 189 >5DOQ-A nrPDB Length = 448 Score = 27.7 bits (60), Expect = 4.4, Method: Compositional matrix adjust. Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 3/35 (8%) Query: 184 PKIPTKM-YVLKHSEICAPFRTA--AAWYLWKTSK 215 P +PTK+ +VL S + + F A AAW+LWK ++ Sbjct: 178 PAMPTKVAHVLATSYMTSAFVLASIAAWHLWKGNR 212 >3VDP-A nrPDB Length = 212 Score = 27.3 bits (59), Expect = 6.1, Method: Compositional matrix adjust. Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 4/39 (10%) Query: 133 SNEELIERLTQIKGIGRWTVEMLLIFSLNRDDVMPADDL 171 S +LIE L+++ GIG T + L F +N MP D++ Sbjct: 20 SVAKLIEELSKLPGIGPKTAQRLAFFIIN----MPLDEV 54 >4KK2-A nrPDB Length = 366 Score = 26.9 bits (58), Expect = 8.1, Method: Compositional matrix adjust. Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 2/57 (3%) Query: 130 ERLSNEELIERLTQIKGIGRWTVEMLLIFSLNRDDVMPADDLSIRNGYRYLHRLPKI 186 + L EEL + + W +E L + L DD+M D+ R G RLPK+ Sbjct: 84 QLLKGEELTDDEIFLSSALGWCIEWLQAYFLVLDDIM--DESHTRRGQPCWFRLPKV 138 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 3S6I-A nrPDB 348 1e-96 4B24-A nrPDB 268 1e-72 2H56-A nrPDB 218 2e-57 3OH9-A nrPDB 202 1e-52 2YG8-A nrPDB 190 5e-49 2JHN-A nrPDB 130 4e-31 4EJY-A nrPDB 100 4e-22 Sequences not found previously or not previously below threshold: 3F10-A nrPDB 66 2e-11 4UOB-A nrPDB 64 4e-11 6G3X-A nrPDB 62 2e-10 2NOB-A nrPDB 59 2e-09 1ORP-A nrPDB 53 9e-08 4UNF-A nrPDB 52 2e-07 2ABK-A nrPDB 49 2e-06 1KG4-A nrPDB 47 6e-06 5KN8-A nrPDB 38 0.004 1VRL-A nrPDB 37 0.006 3VDP-A nrPDB 32 0.29 4RDI-A nrPDB 31 0.41 4GFJ-A nrPDB 30 0.80 5HM5-A nrPDB 30 0.96 6HUL-B nrPDB 30 0.99 5MGY-H nrPDB 29 1.2 5HUD-A nrPDB 29 2.1 6HXJ-A nrPDB 29 2.5 1U2E-A nrPDB 29 2.5 1Y88-A nrPDB 28 2.9 2CSB-A nrPDB 28 3.1 >3S6I-A nrPDB Length = 228 Score = 348 bits (893), Expect = 1e-96, Method: Composition-based stats. Identities = 228/228 (100%), Positives = 228/228 (100%) Query: 1 MTLDIEEKEEIVTSLTKAEIHLSGLDENWKRLVKLVGNYRPNRSMEKKEPYEELIRAVAS 60 MTLDIEEKEEIVTSLTKAEIHLSGLDENWKRLVKLVGNYRPNRSMEKKEPYEELIRAVAS Sbjct: 1 MTLDIEEKEEIVTSLTKAEIHLSGLDENWKRLVKLVGNYRPNRSMEKKEPYEELIRAVAS 60 Query: 61 QQLHSKAANAIFNRFKSISNNGQFPTPEEIRDMDFEIMRACGFSARKIDSLKSIAEATIS 120 QQLHSKAANAIFNRFKSISNNGQFPTPEEIRDMDFEIMRACGFSARKIDSLKSIAEATIS Sbjct: 61 QQLHSKAANAIFNRFKSISNNGQFPTPEEIRDMDFEIMRACGFSARKIDSLKSIAEATIS 120 Query: 121 GLIPTKEEAERLSNEELIERLTQIKGIGRWTVEMLLIFSLNRDDVMPADDLSIRNGYRYL 180 GLIPTKEEAERLSNEELIERLTQIKGIGRWTVEMLLIFSLNRDDVMPADDLSIRNGYRYL Sbjct: 121 GLIPTKEEAERLSNEELIERLTQIKGIGRWTVEMLLIFSLNRDDVMPADDLSIRNGYRYL 180 Query: 181 HRLPKIPTKMYVLKHSEICAPFRTAAAWYLWKTSKLADYTKPVRPKKH 228 HRLPKIPTKMYVLKHSEICAPFRTAAAWYLWKTSKLADYTKPVRPKKH Sbjct: 181 HRLPKIPTKMYVLKHSEICAPFRTAAAWYLWKTSKLADYTKPVRPKKH 228 >4B24-A nrPDB Length = 232 Score = 268 bits (686), Expect = 1e-72, Method: Composition-based stats. Identities = 90/201 (44%), Positives = 125/201 (62%), Gaps = 2/201 (0%) Query: 17 KAEIHLSGLDENWKRLVKLVGNYRPNRSMEKKEPYEELIRAVASQQLHSKAANAIFNRFK 76 +AE HLS +D W LVK VG E PYE +IRA+ SQ+L A N+I N+F Sbjct: 28 RAEKHLSSIDNKWSSLVKKVGPCTLTPHPEHA-PYEGIIRAITSQKLSDAATNSIINKFC 86 Query: 77 -SISNNGQFPTPEEIRDMDFEIMRACGFSARKIDSLKSIAEATISGLIPTKEEAERLSNE 135 S+N +FPTP++I + D E + CGFS K + +AEA ++ IP+K E E++S E Sbjct: 87 TQCSDNDEFPTPKQIMETDVETLHECGFSKLKSQEIHIVAEAALNKQIPSKSEIEKMSEE 146 Query: 136 ELIERLTQIKGIGRWTVEMLLIFSLNRDDVMPADDLSIRNGYRYLHRLPKIPTKMYVLKH 195 EL+E L++IKG+ RWT+EM IF+L R D+MPADD +++N + L P V K Sbjct: 147 ELMESLSKIKGVKRWTIEMYSIFTLGRLDIMPADDSTLKNEAKEFFGLSSKPQTEEVEKL 206 Query: 196 SEICAPFRTAAAWYLWKTSKL 216 ++ C P+RT AAWYLW+ KL Sbjct: 207 TKPCKPYRTIAAWYLWQIPKL 227 >2H56-A nrPDB Length = 233 Score = 218 bits (554), Expect = 2e-57, Method: Composition-based stats. Identities = 61/185 (32%), Positives = 100/185 (54%), Gaps = 2/185 (1%) Query: 30 KRLVKLVGNYRPNRSMEKKEPYEELIRAVASQQLHSKAANAIFNRFKSISNNGQFPTPEE 89 RL + + + K P++ L+ ++ QQL KAA+AI+ R + + G PE+ Sbjct: 31 SRLFQFIEIAGEVQLPTKPNPFQSLVSSIVEQQLSIKAASAIYGRVEQLVG-GALEKPEQ 89 Query: 90 IRDMDFEIMRACGFSARKIDSLKSIAEATISGLIPTKEEAERLSNEELIERLTQIKGIGR 149 + + E +R G S RKI+ ++ + E SG + E E +IE+LT IKGIG+ Sbjct: 90 LYRVSDEALRQAGVSKRKIEYIRHVCEHVESGRLDFTE-LEGAEATTVIEKLTAIKGIGQ 148 Query: 150 WTVEMLLIFSLNRDDVMPADDLSIRNGYRYLHRLPKIPTKMYVLKHSEICAPFRTAAAWY 209 WT EM ++FSL R DV+ D+ ++ G ++L+ + K ++ H + AP+ T A Y Sbjct: 149 WTAEMFMMFSLGRLDVLSVGDVGLQRGAKWLYGNGEGDGKKLLIYHGKAWAPYETVACLY 208 Query: 210 LWKTS 214 LWK + Sbjct: 209 LWKAA 213 >3OH9-A nrPDB Length = 289 Score = 202 bits (513), Expect = 1e-52, Method: Composition-based stats. Identities = 44/188 (23%), Positives = 81/188 (43%), Gaps = 19/188 (10%) Query: 35 LVGNYRPNRSMEKK-EPYEELIRAVASQ--------QLHSKAANAIFNRFKSISNNGQFP 85 +G RP + + +E+ +RA+ Q +L ++ A R FP Sbjct: 104 RLGAARPGLRLPGCVDAFEQGVRAILGQLVSVAMAAKLTARVAQLYGERLDDFPEYICFP 163 Query: 86 TPEEIRDMDFEIMRACGFSARKIDSLKSIAEATISGLIPTKEEAERLSNEELIERLTQIK 145 TP+ + D + ++A G ++ ++L +A A + G +P + E+ ++ L Sbjct: 164 TPQRLAAADPQALKALGMPLKRAEALIHLANAALEGTLPMTIPGD---VEQAMKTLQTFP 220 Query: 146 GIGRWTVEMLLIFSLNRDDVMPADDLSIRNGYRYLHRLPKIPTKMYVLKHSEICAPFRTA 205 GIGRWT + DV DD I+ R P + T + +++E P+R+ Sbjct: 221 GIGRWTANYFALRGWQAKDVFLPDDCLIKQ------RFPGM-TPAQIRRYAERWKPWRSY 273 Query: 206 AAWYLWKT 213 A ++W T Sbjct: 274 ALLHIWYT 281 >2YG8-A nrPDB Length = 225 Score = 190 bits (482), Expect = 5e-49, Method: Composition-based stats. Identities = 56/169 (33%), Positives = 90/169 (53%), Gaps = 10/169 (5%) Query: 46 EKKEPYEELIRAVASQQLHSKAANAIFNRFKSISNNGQFPTPEEIRDMDFEIMRACGFSA 105 +P+ L+R+VA QQL KAA AI+ R + + P + + + +R G S Sbjct: 57 PTPDPFGRLVRSVAGQQLSVKAAQAIYGRLEGLPGG---VVPAALLKVSGDDLRGVGLSW 113 Query: 106 RKIDSLKSIAEATISGLIPTKEEAERLSNEELIERLTQIKGIGRWTVEMLLIFSLNRDDV 165 K+ ++++ A A +SG I + + +E +I L Q+ GIGRWT EM L+F+L R DV Sbjct: 114 AKVRTVQAAAAAAVSGQIDFAHLSGQ-PDELVIAELVQLPGIGRWTAEMFLLFALARPDV 172 Query: 166 MPADDLSIRNGYRYLHRLPKIPTKMYVLKHSEICAPFRTAAAWYLWKTS 214 + DL++R G L+ P + + + AP+R+ A+ YLW S Sbjct: 173 FSSGDLALRQGVERLY-----PGEDW-RDVTARWAPYRSLASRYLWANS 215 >2JHN-A nrPDB Length = 295 Score = 130 bits (327), Expect = 4e-31, Method: Composition-based stats. Identities = 56/171 (32%), Positives = 80/171 (46%), Gaps = 17/171 (9%) Query: 51 YEELIRAVASQQLH----SKAANAIFNRFKS-ISNNG----QFPTPEEIRDMDFEIMRAC 101 +E + +A+ QQ+ K A I RF + NG FPT E I E +R C Sbjct: 119 FEGIAKAIIQQQISFVVAEKLAAKIVGRFGDEVEWNGLKFYGFPTQEAILKAGVEGLREC 178 Query: 102 GFSARKIDSLKSIAEATISGLIPTKEEAERLSNEELIERLTQIKGIGRWTVEMLLIFSLN 161 G S RK + + IA+ EE + EE E LT KGIGRWT E++L +L Sbjct: 179 GLSRRKAELIVEIAKEE------NLEELKEWGEEEAYEYLTSFKGIGRWTAELVLSIALG 232 Query: 162 RDDVMPADDLSIRNGYRYLHRLPKIPTKMYVLKHS-EICAPFRTAAAWYLW 211 + +V PADDL +R L+ +I + V + + E F +YL+ Sbjct: 233 K-NVFPADDLGVRRAVSRLYFNGEIQSAEKVREIARERFGRFARDILFYLF 282 >4EJY-A nrPDB Length = 311 Score = 100 bits (249), Expect = 4e-22, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 69/183 (37%), Gaps = 18/183 (9%) Query: 42 NRSMEKKEPYEELIRAVASQQLHSKAANAIFNRFKSISNNG---------QFPTPEEIRD 92 + +++ +E L+ + SQ + + N FP PEE+ Sbjct: 120 GIRILRQDTWETLVSFIVSQNNRIPQIKKVIENLATSFGNPIEYKGKIYYTFPKPEELVM 179 Query: 93 MDFEIMRA--CGFSARKI-DSLKSIAEATISGLIPTKEEAERLSNEELIERLTQIKGIGR 149 D E + CGF A+ I D+ + I+ L + S E+ + L I G+G Sbjct: 180 YDVETIAKTRCGFRAKYIFDAASKVFSGEINLL-----KLHEYSTSEIRDILMTINGVGP 234 Query: 150 WTVEMLLIFSLNRDDVMPADDLSIRNGYRYLHRLPKIPTKMYVLKHSEICAPFRTAAAWY 209 + ++++S+ R D P D+ I+ +L+ + L + A Y Sbjct: 235 KVADCVILYSIGRYDTFPT-DVWIKRIVEHLYLKREGTPVEIQLFAIDKFGDLSGFAQQY 293 Query: 210 LWK 212 L+ Sbjct: 294 LFY 296 >3F10-A nrPDB Length = 292 Score = 65.6 bits (158), Expect = 2e-11, Method: Composition-based stats. Identities = 34/196 (17%), Positives = 74/196 (37%), Gaps = 18/196 (9%) Query: 32 LVKLVGNYRPNRSMEKKEPYEELIRAVASQQLHSKAANAIFNRFKSISN---------NG 82 L+K ++ + +++P+E L+ + S N + Sbjct: 97 LLKKSVDFGEGIRILRQDPFEILLSFIISANNRIPMIKKCINNISEKAGKKLEYKGKIYY 156 Query: 83 QFPTPEEIRDMDFEIMRAC--GFSARKI-DSLKSIAEATISGLIPTKEEAERLSNEELIE 139 FPT +++ + + C GF A+ + D++ I ++ E + L++ E E Sbjct: 157 AFPTVDKLHEFTEKDFEECTAGFRAKYLKDTVDRIYNGELN-----LEYIKSLNDNECHE 211 Query: 140 RLTQIKGIGRWTVEMLLIFSLNRDDVMPADDLSIRNGYRYLHRLPKIPTKMYVLKHSEIC 199 L + G+G + +++FS+ + P D ++ L+ P + K E Sbjct: 212 ELKKFMGVGPQVADCIMLFSMQKYSAFPV-DTWVKKAMMSLYVAPDVSLKKIRDFGREKF 270 Query: 200 APFRTAAAWYLWKTSK 215 A YL+ ++ Sbjct: 271 GSLSGFAQQYLFYYAR 286 >4UOB-A nrPDB Length = 278 Score = 64.4 bits (155), Expect = 4e-11, Method: Composition-based stats. Identities = 40/195 (20%), Positives = 67/195 (34%), Gaps = 23/195 (11%) Query: 32 LVKLVGNYRPNRSMEK--KEPYEELIRAVASQQLHSKAANAIFNRFKSISNNGQFPTPEE 89 L +L Y P + +P LIR + SQQ + A + +P E Sbjct: 44 LSRLRDTYAPELPPPRQFPDPLGGLIRTILSQQNTRRVAQRQWEVL-----TATYPQWEA 98 Query: 90 IRDMDFEIMRAC------GFSARKIDSL----KSIAEATISGLIPTKEEAERLSN--EEL 137 + + A G S K D + + E + E E+ Sbjct: 99 ALLDGPDGIEATLKSAGGGLSRMKADYIYGILAHLQEHHGGLSLRFLREFPHTPEGHEQA 158 Query: 138 IERLTQIKGIGRWTVEMLLIFSLNRDDVMPADDLSIRNGYRYLHRLPKIPTKMYVLKHSE 197 + L + G+G TV ++L+F L R MP D ++ + L +P V + Sbjct: 159 RQALAALPGVGHKTVALVLLFDLRRP-AMPVDG-NMERAAKRLELVPAAWNSHKVERWYA 216 Query: 198 ICAP--FRTAAAWYL 210 P + T A ++ Sbjct: 217 EVMPADWETRFALHI 231 >6G3X-A nrPDB Length = 318 Score = 61.7 bits (148), Expect = 2e-10, Method: Composition-based stats. Identities = 32/219 (14%), Positives = 73/219 (33%), Gaps = 27/219 (12%) Query: 10 EIVTSLTKAEIHLSGLDENWKRLVKLVGNYRPNRSMEKKEPYEELIRAVASQQ------- 62 ++ SL + H + +D +++R+ + + +++P E L + S Sbjct: 94 QLDVSLAQLYSHWASVDSHFQRVAQKF----QGVRLLRQDPTECLFSFICSSNNNIARIT 149 Query: 63 -LHSKAANAIFNRFKSISN--NGQFPTPEEIRDMDFEI-MRACGFSARKIDSLKSIAEA- 117 + + A R + + FP + + E +R G R +++ A+A Sbjct: 150 GMVERLCQAFGPRLIQLDDVTYHGFPNLHALAGPEAETHLRKLGLGYR-ARYVRASAKAI 208 Query: 118 -TISGLIPTKEEAERLSNEELIERLTQIKGIGRWTVEMLLIFSLNRDDVMPAD------- 169 G ++ EE + L + G+G + + + +L++ +P D Sbjct: 209 LEEQGGPAWLQQLRVAPYEEAHKALCTLPGVGAKVADCICLMALDKPQAVPVDVHVWQIA 268 Query: 170 --DLSIRNGYRYLHRLPKIPTKMYVLKHSEICAPFRTAA 206 D + K + P+ A Sbjct: 269 HRDYGWHPKTSQAKGPSPLANKELGNFFRNLWGPYAGWA 307 >2NOB-A nrPDB Length = 325 Score = 58.7 bits (140), Expect = 2e-09, Method: Composition-based stats. Identities = 32/219 (14%), Positives = 73/219 (33%), Gaps = 27/219 (12%) Query: 10 EIVTSLTKAEIHLSGLDENWKRLVKLVGNYRPNRSMEKKEPYEELIRAVASQ-------- 61 ++ +L + H +D +++ + + + +++P E L + S Sbjct: 99 QLDVTLAQLYHHWGSVDSHFQEVAQKF----QGVRLLRQDPIECLFSFICSSCNNIARIT 154 Query: 62 QLHSKAANAIFNRFKSISN--NGQFPTPEEIRDMDFEI-MRACGFSARKIDSLKSIAEA- 117 + + A R + + FP+ + + + E +R G R + + A A Sbjct: 155 GMVERLCQAFGPRLIQLDDVTYHGFPSLQALAGPEVEAHLRKLGLGYR-ARYVSASARAI 213 Query: 118 -TISGLIPTKEEAERLSNEELIERLTQIKGIGRWTVEMLLIFSLNRDDVMPAD------- 169 G + ++ S EE + L + G+G + + + +L++ +P D Sbjct: 214 LEEQGGLAWLQQLRESSYEEAHKALCILPGVGTQVADCICLMALDKPQAVPVDVAMWHIA 273 Query: 170 --DLSIRNGYRYLHRLPKIPTKMYVLKHSEICAPFRTAA 206 D S K + P+ A Sbjct: 274 QRDYSWHPTTSQAKGPSPQTNKELGNFFRSLWGPYAGWA 312 >1ORP-A nrPDB Length = 226 Score = 53.3 bits (126), Expect = 9e-08, Method: Composition-based stats. Identities = 28/149 (18%), Positives = 55/149 (36%), Gaps = 27/149 (18%) Query: 41 PNRSME--KKEPYEELIRAVASQQLHSKAANAIFNRFKSISNNGQFPTPEEIRDMDFE-- 96 P+ E + P+E LI V S Q N + R ++ TP + + E Sbjct: 22 PDAHCELVHRNPFELLIAVVLSAQCTDALVNKVTKRL-----FEKYRTPHDYIAVPLEEL 76 Query: 97 --IMRACGFSARKIDSLKSIAEATI---SGLIPTKEEAERLSNEELIERLTQIKGIGRWT 151 +R+ G K +++ + I +G +P + L ++ G+GR T Sbjct: 77 EQDIRSIGLYRNKARNIQKLCAMLIDKYNGEVPRD-----------RDELMKLPGVGRKT 125 Query: 152 VEMLLIFSLNRDDVMPADDLSIRNGYRYL 180 +++ + + A D + + L Sbjct: 126 ANVVVSVAFGVPAI--AVDTHVERVSKRL 152 >4UNF-A nrPDB Length = 265 Score = 52.1 bits (123), Expect = 2e-07, Method: Composition-based stats. Identities = 29/144 (20%), Positives = 57/144 (39%), Gaps = 13/144 (9%) Query: 30 KRLVKLVGNYRPNRSMEKKEPYEELIRAVASQQLHSKAANAIFNRFKSISNNGQFPTPEE 89 +RL + G+ P ++P ELI + SQ+ A + +++ + Sbjct: 38 ERLHEEYGDQDPTPR---RDPMHELISTILSQRTTHADEEAAYQELRTLGDWDAITL--A 92 Query: 90 IRDMDFEIMRACGFSARKI----DSLKSIAEATISGLIPTKEEAERLSNEELIERLTQIK 145 D +R + K ++L+ I A + L ++ ++ LT + Sbjct: 93 PTDAVAHAIRRSNYPESKAPRIQETLRRIKAAPGGYDLDF---LRDLPVKDALKWLTDLP 149 Query: 146 GIGRWTVEMLLIFSLNRDDVMPAD 169 G+G T ++L+F+ R V P D Sbjct: 150 GVGVKTASLVLLFNYARP-VFPVD 172 >2ABK-A nrPDB Length = 211 Score = 49.0 bits (115), Expect = 2e-06, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 51/164 (31%), Gaps = 19/164 (11%) Query: 38 NYRPNRSMEKKEPYEELIRAVASQQLHSKAANAIFNRFKSISNNGQFPTPEEIRDMDFEI 97 N P + P+E LI + S Q + N + ++N TP + ++ E Sbjct: 17 NPHPTTELNFSSPFELLIAVLLSAQATDVSVNKATAKLYPVAN-----TPAAMLELGVEG 71 Query: 98 ----MRACGFSARKIDSLKSIAEATISGLIPTKEEAERLSNEELIERLTQIKGIGRWTVE 153 ++ G K +++ E E L + G+GR T Sbjct: 72 VKTYIKTIGLYNSKAENIIKTCR--------ILLEQHNGEVPEDRAALEALPGVGRKTAN 123 Query: 154 MLLIFSLNRDDVMPADDLSIRNGYRYLHRLPKIPTKMYVLKHSE 197 ++L + + A D I P + K + Sbjct: 124 VVLNTAFGWPTI--AVDTHIFRVCNRTQFAPGKNVEQVEEKLLK 165 >1KG4-A nrPDB Length = 225 Score = 47.1 bits (110), Expect = 6e-06, Method: Composition-based stats. Identities = 32/150 (21%), Positives = 53/150 (35%), Gaps = 20/150 (13%) Query: 48 KEPYEELIRAVASQQLHSKAANAIFNRFKSISNNGQFPTPEEIRDMD-FEIMR---ACGF 103 K PY+ + V QQ F RF +FPT ++ + E++ G+ Sbjct: 28 KTPYKVWLSEVMLQQTQVATVIPYFERF-----MARFPTVTDLANAPLDEVLHLWTGLGY 82 Query: 104 SARKIDSLKSIAEATISGLIPTKEEAERLSNEELIERLTQIKGIGRWTVEMLLIFSLNRD 163 AR +L A+ + E E + + G+GR T +L SL + Sbjct: 83 YAR-ARNLHKAAQQVAT--------LHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKH 133 Query: 164 DVMPADDLSIRNGYRYLHRLPKIPTKMYVL 193 P D ++ + + P K V Sbjct: 134 --FPILDGNVARVLARCYAVSGWPGKKEVE 161 >5KN8-A nrPDB Length = 232 Score = 37.9 bits (86), Expect = 0.004, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 50/133 (37%), Gaps = 12/133 (9%) Query: 49 EPYEELIRAVASQQLHSKAANAIFNRFKSISNNGQFPTPEEIRDMDFEIMRACGFSARKI 108 +PY+ + V QQ + F +F +FPT E + D D + + Sbjct: 38 DPYKVWVSEVMLQQTRVETVIPYFEQFID-----RFPTLEALADADEDEVLKAWEGLGYY 92 Query: 109 DSLKSIAEATISGLIPTKEEAERLSNEELIERLTQIKGIGRWTVEMLLIFSLNRDDVMPA 168 ++++ A + +E +++KG+G +TV +L + + PA Sbjct: 93 SRVRNLHAAVKEVKTRYGGKVPDDPDE-----FSRLKGVGPYTVGAVLSLAYGVPE--PA 145 Query: 169 DDLSIRNGYRYLH 181 + ++ L Sbjct: 146 VNGNVMRVLSRLF 158 >1VRL-A nrPDB Length = 369 Score = 37.1 bits (84), Expect = 0.006, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 50/133 (37%), Gaps = 12/133 (9%) Query: 49 EPYEELIRAVASQQLHSKAANAIFNRFKSISNNGQFPTPEEIRDMDFEIMRACGFSARKI 108 +PY+ + V QQ + F +F +FPT E + D D + + Sbjct: 38 DPYKVWVSEVMLQQTRVETVIPYFEQFID-----RFPTLEALADADEDEVLKAWEGLGYY 92 Query: 109 DSLKSIAEATISGLIPTKEEAERLSNEELIERLTQIKGIGRWTVEMLLIFSLNRDDVMPA 168 ++++ A + +E +++KG+G +TV +L + + PA Sbjct: 93 SRVRNLHAAVKEVKTRYGGKVPDDPDE-----FSRLKGVGPYTVGAVLSLAYGVPE--PA 145 Query: 169 DDLSIRNGYRYLH 181 + ++ L Sbjct: 146 VNGNVMRVLSRLF 158 >3VDP-A nrPDB Length = 212 Score = 31.7 bits (70), Expect = 0.29, Method: Composition-based stats. Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 4/39 (10%) Query: 133 SNEELIERLTQIKGIGRWTVEMLLIFSLNRDDVMPADDL 171 S +LIE L+++ GIG T + L F +N MP D++ Sbjct: 20 SVAKLIEELSKLPGIGPKTAQRLAFFIIN----MPLDEV 54 >4RDI-A nrPDB Length = 288 Score = 30.9 bits (68), Expect = 0.41, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 22/58 (37%) Query: 141 LTQIKGIGRWTVEMLLIFSLNRDDVMPADDLSIRNGYRYLHRLPKIPTKMYVLKHSEI 198 + I G+G W E L + ++ DD+ + N R +H L +E Sbjct: 55 VVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAER 112 >4GFJ-A nrPDB Length = 685 Score = 30.1 bits (66), Expect = 0.80, Method: Composition-based stats. Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 10/133 (7%) Query: 20 IHLSGLD-ENWKRLVKLVGNYRPNRSMEKKEPYE-ELIRAVASQQLHSKAANAIFNRFKS 77 I + G+D E +RL+K G Y R +E E L A + K +I + Sbjct: 471 ISIRGIDRERAERLLKKYGGYSKVREAGVEELREDGLTDAQIRELKGLKTLESIVGDLEK 530 Query: 78 ISN-NGQFPTPEEIRDMDFEIMRACGFSARKIDSLKSIAEATISGLIPTKEEAERLSNEE 136 ++ + +R + E +R GFS +I +K I + +E + + E Sbjct: 531 ADELKRKYGSASAVRRLPVEELRELGFSDDEIAEIKGIPK-------KLREAFDLETAAE 583 Query: 137 LIERLTQIKGIGR 149 L ER +K IGR Sbjct: 584 LYERYGSLKEIGR 596 Score = 27.1 bits (58), Expect = 5.9, Method: Composition-based stats. Identities = 25/125 (20%), Positives = 47/125 (37%), Gaps = 29/125 (23%) Query: 41 PNRSMEKKEPYEELIRAVASQQ-LHSKAANAIFNRFKSISNNGQFPTPEEIRDMDFEIMR 99 P+ ++E+ + + + + L AA+ + F+SI+ I D E + Sbjct: 339 PDLTLEEAKSVNRTLATLIDEHGLSPDAADELIEHFESIAG---------ILATDLEEIE 389 Query: 100 ACGFSARKIDSLKSIAEATISGLIPTKEEAERLSNEELIERLTQIKGIGRWTVEMLLIFS 159 G + EEA R + E + LT+ +G+GR T E L+ + Sbjct: 390 RM----------------YEEGRL--SEEAYRAAVEIQLAELTKKEGVGRKTAER-LLRA 430 Query: 160 LNRDD 164 + Sbjct: 431 FGNPE 435 >5HM5-A nrPDB Length = 854 Score = 29.8 bits (65), Expect = 0.96, Method: Composition-based stats. Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 10/133 (7%) Query: 20 IHLSGLD-ENWKRLVKLVGNYRPNRSMEKKEPYE-ELIRAVASQQLHSKAANAIFNRFKS 77 I + G+D E +RL+K G Y R +E E L A + K +I + Sbjct: 471 ISIRGIDRERAERLLKKYGGYSKVREAGVEELREDGLTDAQIRELKGLKTLESIVGDLEK 530 Query: 78 ISN-NGQFPTPEEIRDMDFEIMRACGFSARKIDSLKSIAEATISGLIPTKEEAERLSNEE 136 ++ + +R + E +R GFS +I +K I + +E + + E Sbjct: 531 ADELKRKYGSASAVRRLPVEELRELGFSDDEIAEIKGIPK-------KLREAFDLETAAE 583 Query: 137 LIERLTQIKGIGR 149 L ER +K IGR Sbjct: 584 LYERYGSLKEIGR 596 Score = 27.1 bits (58), Expect = 7.0, Method: Composition-based stats. Identities = 25/125 (20%), Positives = 47/125 (37%), Gaps = 29/125 (23%) Query: 41 PNRSMEKKEPYEELIRAVASQQ-LHSKAANAIFNRFKSISNNGQFPTPEEIRDMDFEIMR 99 P+ ++E+ + + + + L AA+ + F+SI+ I D E + Sbjct: 339 PDLTLEEAKSVNRTLATLIDEHGLSPDAADELIEHFESIAG---------ILATDLEEIE 389 Query: 100 ACGFSARKIDSLKSIAEATISGLIPTKEEAERLSNEELIERLTQIKGIGRWTVEMLLIFS 159 G + EEA R + E + LT+ +G+GR T E L+ + Sbjct: 390 RM----------------YEEGRL--SEEAYRAAVEIQLAELTKKEGVGRKTAER-LLRA 430 Query: 160 LNRDD 164 + Sbjct: 431 FGNPE 435 >6HUL-B nrPDB Length = 425 Score = 29.8 bits (65), Expect = 0.99, Method: Composition-based stats. Identities = 24/151 (15%), Positives = 44/151 (29%), Gaps = 10/151 (6%) Query: 54 LIRAVASQQLHSKAANAIFNRFKSISNNGQFPTPEEIRDMDFEIMRACGFSARKIDSLKS 113 L + V QQ + I + + PTP E ++ K + Sbjct: 44 LPKEVLRQQFTIERYIKIPEEVRDRYLSIGRPTPLFRAKRLEEYLKTPARIYFKYEGATP 103 Query: 114 IAEATISGLIPTKEEAERLSNEELIERLTQIKGIGRW------TVEMLLIFSLNRDDVMP 167 I+ IP + EE IE + G G+W M + S + Sbjct: 104 TGSHKINTAIPQAY----FAKEEGIEHVVTETGAGQWGTAVALAASMYNMKSTIFMVKVS 159 Query: 168 ADDLSIRNGYRYLHRLPKIPTKMYVLKHSEI 198 + +R L+ + + ++ Sbjct: 160 YEQKPMRRSIMQLYGANVYASPTNLTEYGRK 190 >5MGY-H nrPDB Length = 332 Score = 29.4 bits (64), Expect = 1.2, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 22/50 (44%), Gaps = 3/50 (6%) Query: 46 EKKEPYEELIRAVASQ---QLHSKAANAIFNRFKSISNNGQFPTPEEIRD 92 KE + A+ Q QL + +++ RF ++ P P+ +R+ Sbjct: 33 PAKEVLHGEVEAILGQLDKQLSTYRSDSDVERFNALPAGSCEPMPDMVRE 82 >5HUD-A nrPDB Length = 472 Score = 28.6 bits (62), Expect = 2.1, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 35/118 (29%), Gaps = 2/118 (1%) Query: 38 NYRPNRSMEKKEPYEELIRAVASQQLHSKAANAIFNR--FKSISNNGQFPTPEEIRDMDF 95 R R+ L+RA+ S + +NR + ++ D Sbjct: 176 PARMIRAYANASAAMNLVRALTSSGTADLYRLSEWNREFVANSPAGARYEALAREIDSGL 235 Query: 96 EIMRACGFSARKIDSLKSIAEATISGLIPTKEEAERLSNEELIERLTQIKGIGRWTVE 153 M ACG S + + + + ++EE E L + W E Sbjct: 236 RFMEACGVSDESLRAADIYCSHEALLVDYERSMLRLATDEEGNEELYDLSAHQLWIGE 293 >6HXJ-A nrPDB Length = 398 Score = 28.6 bits (62), Expect = 2.5, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 26/74 (35%), Gaps = 2/74 (2%) Query: 83 QFPTPEEIRDMDFEIMRACGFS--ARKIDSLKSIAEATISGLIPTKEEAERLSNEELIER 140 P P + MD + + G + + L A I G L+ E+ IE Sbjct: 17 GIPVPNYVVIMDPDRLAQLGEANKWLRESKLVVKAHEAIGGRFKLGLVKIGLNLEQAIEA 76 Query: 141 LTQIKGIGRWTVEM 154 ++ G T E+ Sbjct: 77 AKEMLGAKVGTAEI 90 >1U2E-A nrPDB Length = 289 Score = 28.6 bits (62), Expect = 2.5, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 25/69 (36%), Gaps = 3/69 (4%) Query: 108 IDSLKSIAEATISGLIPTKEEAERLSNEELIERLTQIKGIGRWTVEMLL--IFSLNRDDV 165 D ++ EA ++ ++ ++ E + L Q G E+ + R+D Sbjct: 183 SDLTDALFEARLNNMLSRRDHLENF-VKSLEANPKQFPDFGPRLAEIKAQTLIVWGRNDR 241 Query: 166 MPADDLSIR 174 D +R Sbjct: 242 FVPMDAGLR 250 >1Y88-A nrPDB Length = 199 Score = 28.2 bits (61), Expect = 2.9, Method: Composition-based stats. Identities = 9/32 (28%), Positives = 15/32 (46%) Query: 90 IRDMDFEIMRACGFSARKIDSLKSIAEATISG 121 + E +R G SA+K + + A+ I G Sbjct: 167 VVSAGEEKLREIGLSAKKAREVIAEAKKVIGG 198 >2CSB-A nrPDB Length = 519 Score = 28.2 bits (61), Expect = 3.1, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 62/159 (38%), Gaps = 33/159 (20%) Query: 8 KEEIVTSLTKA-EIHLSGLDENWKRLVKLVGNYRPNRSMEKKEPYEELIRAVASQQ-LHS 65 +E++ L +A + +S + R +K V P+ ++E+ + + + + L Sbjct: 308 REDVALCLARAFDGSISMIATTPYRTLKDV---CPDLTLEEAKSVNRTLATLIDEHGLSP 364 Query: 66 KAANAIFNRFKSISNNGQFPTPEEIRDMDFEIMRACGFSARKIDSLKSIAEATISGLIPT 125 AA+ + F+SI+ I D E + G + Sbjct: 365 DAADELIEHFESIAG---------ILATDLEEIERM----------------YEEGRL-- 397 Query: 126 KEEAERLSNEELIERLTQIKGIGRWTVEMLLIFSLNRDD 164 EEA R + E + LT+ +G+GR T E L+ + + Sbjct: 398 SEEAYRAAVEIQLAELTKKEGVGRKTAER-LLRAFGNPE 435 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.307 0.123 0.316 Lambda K H 0.267 0.0381 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 7,596,037 Number of Sequences: 36641 Number of extensions: 250807 Number of successful extensions: 961 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 34 Number of HSP's successfully gapped in prelim test: 30 Number of HSP's that attempted gapping in prelim test: 894 Number of HSP's gapped (non-prelim): 72 length of query: 228 length of database: 10,336,785 effective HSP length: 94 effective length of query: 134 effective length of database: 6,892,531 effective search space: 923599154 effective search space used: 923599154 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 57 (26.7 bits)