BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q8WXB1 (218 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 4LEC-A nrPDB 437 e-123 4QPN-A nrPDB 164 4e-41 4LG1-A nrPDB 109 9e-25 4MTL-A nrPDB 97 7e-21 1YXM-A nrPDB 35 0.023 4PWY-A nrPDB 32 0.24 5EKU-A nrPDB 30 0.67 4M36-A nrPDB 30 0.72 5LV5-A nrPDB 30 0.95 3DMF-A nrPDB 30 1.0 5EGS-A nrPDB 30 1.1 3IAR-A nrPDB 28 2.7 1WY7-A nrPDB 28 2.9 5UL4-A nrPDB 28 3.6 1G6Q-1 nrPDB 28 3.9 5WP5-A nrPDB 28 4.0 4M8N-A nrPDB 27 5.0 2BGN-E nrPDB 27 5.2 4LWO-B nrPDB 27 6.0 3CJ8-A nrPDB 27 7.0 >4LEC-A nrPDB Length = 212 Score = 437 bits (1123), Expect = e-123, Method: Compositional matrix adjust. Identities = 211/211 (100%), Positives = 211/211 (100%) Query: 8 ETTEFGLQKFHKPLATFSFANHTIQIRQDWRHLGVAAVVWDAAIVLSTYLEMGAVELRGR 67 ETTEFGLQKFHKPLATFSFANHTIQIRQDWRHLGVAAVVWDAAIVLSTYLEMGAVELRGR Sbjct: 2 ETTEFGLQKFHKPLATFSFANHTIQIRQDWRHLGVAAVVWDAAIVLSTYLEMGAVELRGR 61 Query: 68 SAVELGAGTGLVGIVAALLGAHVTITDRKVALEFLKSNVQANLPPHIQTKTVVKELTWGQ 127 SAVELGAGTGLVGIVAALLGAHVTITDRKVALEFLKSNVQANLPPHIQTKTVVKELTWGQ Sbjct: 62 SAVELGAGTGLVGIVAALLGAHVTITDRKVALEFLKSNVQANLPPHIQTKTVVKELTWGQ 121 Query: 128 NLGSFSPGEFDLILGADIIYLEETFTDLLQTLEHLCSNHSVILLACRIRYERDNNFLAML 187 NLGSFSPGEFDLILGADIIYLEETFTDLLQTLEHLCSNHSVILLACRIRYERDNNFLAML Sbjct: 122 NLGSFSPGEFDLILGADIIYLEETFTDLLQTLEHLCSNHSVILLACRIRYERDNNFLAML 181 Query: 188 ERQFTVRKVHYDPEKDVHIYEAQKRNQKEDL 218 ERQFTVRKVHYDPEKDVHIYEAQKRNQKEDL Sbjct: 182 ERQFTVRKVHYDPEKDVHIYEAQKRNQKEDL 212 >4QPN-A nrPDB Length = 227 Score = 164 bits (414), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 90/197 (45%), Positives = 125/197 (63%), Gaps = 6/197 (3%) Query: 22 ATFSFANHTIQIRQDW-RHLGVAAVVWDAAIVLSTYLEMGAVELRGRSAVELGAGTGLVG 80 + F F H + I Q++ LGVAA VWDAA+ L Y E V+ RG+ +ELGAGTG+VG Sbjct: 32 SQFCFCGHVLTITQNFGSRLGVAARVWDAALSLCNYFESQNVDFRGKKVIELGAGTGIVG 91 Query: 81 IVAALLGAHVTITDRKVALEFLKSNVQANLPPHIQTKTVVKELTWGQNLGSFSPGEFDLI 140 I+AAL G VTITD +ALE ++ NVQAN+P Q + V+ L+WG + F P +DL+ Sbjct: 92 ILAALQGGDVTITDLPLALEQIQGNVQANVPAGGQAQ--VRALSWGIDHHVF-PANYDLV 148 Query: 141 LGADIIYLEETFTDLLQTLEHLCSNHSVILLACRIRYER--DNNFLAMLERQFTVRKVHY 198 LGADI+YLE TF LL TL+HLC H I LA ++R E ++ F +L + F + Sbjct: 149 LGADIVYLEPTFPLLLGTLQHLCRPHGTIYLASKMRKEHGTESFFQHLLPQHFQLELAQR 208 Query: 199 DPEKDVHIYEAQKRNQK 215 D +++V+IY A+ R + Sbjct: 209 DEDENVNIYRARHREPR 225 >4LG1-A nrPDB Length = 224 Score = 109 bits (273), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 77/206 (37%), Positives = 109/206 (52%), Gaps = 21/206 (10%) Query: 28 NHTIQIRQDWRHLGVAAVVWDAAIVLSTYLEM------GAVELRGRSAVELGAGTGLVGI 81 + T+ Q + GV VVWDAAIVLS YLE GA L RS +ELG+GTG VG+ Sbjct: 19 DGTVLRLQQYSSGGVGCVVWDAAIVLSKYLETPEFSGDGAHALSRRSVLELGSGTGAVGL 78 Query: 82 VAALLGAHVTITDRKVALEFLKSNVQANLPPHIQTKTV-VKELTWGQNLGSFSPGEFDLI 140 +AA LGA V +TD + + LK N+ N+ H+ T +V K L WG+ + F P D I Sbjct: 79 MAATLGADVVVTDLEELQDLLKMNI--NMNKHLVTGSVQAKVLKWGEEIEGF-PSPPDFI 135 Query: 141 LGADIIYLEETFTDLLQTLEHLCSNHSVILLACRIRY-----ERDNNFLAMLERQFTVRK 195 L AD IY EE+ LL+TL+ + + I+ R E + + +L+ F K Sbjct: 136 LMADCIYYEESLEPLLKTLKDISGFETCIICCYEQRTMGKNPEIEKKYFELLQLDFDFEK 195 Query: 196 V---HYDPE---KDVHIYEAQKRNQK 215 + +D E +D+HI +K+ K Sbjct: 196 IPLEKHDEEYRSEDIHIIYIRKKKSK 221 >4MTL-A nrPDB Length = 244 Score = 96.7 bits (239), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 66/191 (34%), Positives = 96/191 (50%), Gaps = 7/191 (3%) Query: 24 FSFANHTIQIRQDWRHLGVAAVVWDAAIVLSTYLEMGAVELRGRSA--VELGAGTGLVGI 81 + FA I I++ G AVVW A+ L YLE A EL + A +E+GAG GLV I Sbjct: 51 YRFAGKEIVIQESIESYG--AVVWPGAMALCQYLEEHAEELNFQDAKILEIGAGPGLVSI 108 Query: 82 VAALLGAHVTITDRKVALEFLKSNVQANLPPHIQTKTVVKELTWGQNLGSFSPGE---FD 138 VA++LGA VT TD L L+ N+ N VKEL WG++L P +D Sbjct: 109 VASILGAQVTATDLPDVLGNLQYNLLKNTLQCTAHLPEVKELVWGEDLDKNFPKSAFYYD 168 Query: 139 LILGADIIYLEETFTDLLQTLEHLCSNHSVILLACRIRYERDNNFLAMLERQFTVRKVHY 198 +L +D++Y LL T+ +L +V+L A + R+ D FL ++ F + Sbjct: 169 YVLASDVVYHHYFLDKLLTTMVYLSQPGTVLLWANKFRFSTDYEFLDKFKQVFDTTLLAE 228 Query: 199 DPEKDVHIYEA 209 PE V +++ Sbjct: 229 YPESSVKLFKG 239 >1YXM-A nrPDB Length = 303 Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust. Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 10/71 (14%) Query: 55 TYLEMGAVELRGRSAVELGAGTGL-VGIVAALL--GAHVTITDRKVALEFLKS---NVQA 108 +YL G L+G+ A+ G TG+ IV LL G++V I RK LE LKS +QA Sbjct: 9 SYLAPGL--LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRK--LERLKSAADELQA 64 Query: 109 NLPPHIQTKTV 119 NLPP Q + + Sbjct: 65 NLPPTKQARVI 75 >4PWY-A nrPDB Length = 264 Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust. Identities = 35/181 (19%), Positives = 77/181 (42%), Gaps = 7/181 (3%) Query: 45 VVWDAAIVLSTYLEMGAVELRGRSAVELGAG-TGLVGIVAALLG--AHVTITD-RKVALE 100 +W + VL+ Y R + ELG G T L G++ A+ V +TD + A+ Sbjct: 67 CIWPSEEVLAYYCLKHNNIFRALAVCELGGGMTCLAGLMVAISADVKEVLLTDGNEKAIR 126 Query: 101 FLKSNVQANLPPHI-QTKTVVKELTWGQNLGSFS--PGEFDLILGADIIYLEETFTDLLQ 157 ++ + N + +T+ + N S G FD+++ AD ++L++ L+ Sbjct: 127 NVQDIITRNQKAGVFKTQKISSCFLRWDNETDVSQLEGHFDIVMCADCLFLDQYRASLVD 186 Query: 158 TLEHLCSNHSVILLACRIRYERDNNFLAMLERQFTVRKVHYDPEKDVHIYEAQKRNQKED 217 ++ L ++ R N F + E+ + H + ++ + + ++ + + D Sbjct: 187 AIKRLLQPRGKAMVFAPRRGNTLNQFCNLAEKAGFCIQRHENYDEHISNFHSKLKKENPD 246 Query: 218 L 218 + Sbjct: 247 I 247 >5EKU-A nrPDB Length = 390 Score = 30.4 bits (67), Expect = 0.67, Method: Compositional matrix adjust. Identities = 15/42 (35%), Positives = 27/42 (64%), Gaps = 2/42 (4%) Query: 70 VELGAGTGLVGIVAALLGAH--VTITDRKVALEFLKSNVQAN 109 +E+GAG+GL+ ++AA LGA V + + + + N++AN Sbjct: 100 LEIGAGSGLLSLMAAKLGAKWVVAVEGSEELAKLARENIRAN 141 >4M36-A nrPDB Length = 343 Score = 30.0 bits (66), Expect = 0.72, Method: Compositional matrix adjust. Identities = 15/42 (35%), Positives = 27/42 (64%), Gaps = 2/42 (4%) Query: 70 VELGAGTGLVGIVAALLGAH--VTITDRKVALEFLKSNVQAN 109 +E+GAG+GL+ ++AA LGA V + + + + N++AN Sbjct: 65 LEIGAGSGLLSLMAAKLGAKWVVAVEGSEELAKLARENIRAN 106 >5LV5-A nrPDB Length = 403 Score = 29.6 bits (65), Expect = 0.95, Method: Compositional matrix adjust. Identities = 12/25 (48%), Positives = 19/25 (76%) Query: 64 LRGRSAVELGAGTGLVGIVAALLGA 88 LRG++ +++GAGTG++ I A GA Sbjct: 109 LRGKTVLDVGAGTGILSIFCAQAGA 133 >3DMF-A nrPDB Length = 381 Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust. Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 8/103 (7%) Query: 15 QKFHKPLATF--SFANHTIQIRQDWRHL-GV--AAVVWDAAIVLSTYLE--MGAVELRGR 67 +K PL + +F+ + + HL GV A V A+++L L+ +G +RGR Sbjct: 176 EKEAPPLPSLWRAFSARILGAEYTFHHLPGVFSAGKVDPASLLLLEALQERLGPEGVRGR 235 Query: 68 SAVELGAGTGLVGIVAALLGAHVT-ITDRKVALEFLKSNVQAN 109 ++LGAG G + + A +GA V + D ++ L+ ++AN Sbjct: 236 QVLDLGAGYGALTLPLARMGAEVVGVEDDLASVLSLQKGLEAN 278 >5EGS-A nrPDB Length = 376 Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust. Identities = 12/26 (46%), Positives = 19/26 (73%) Query: 64 LRGRSAVELGAGTGLVGIVAALLGAH 89 LRG++ +++GAGTG++ I A GA Sbjct: 82 LRGKTVLDVGAGTGILSIFCAQAGAR 107 >3IAR-A nrPDB Length = 367 Score = 28.1 bits (61), Expect = 2.7, Method: Compositional matrix adjust. Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 9/78 (11%) Query: 82 VAALLGAHVTITDRKVALEFLKSN-------VQANLPPHIQTKTVVKELTWGQNLGSFSP 134 + A+ G I +++A EF++ V+ PH+ + V+ + W Q G +P Sbjct: 66 MPAIAGCREAI--KRIAYEFVEMKAKEGVVYVEVRYSPHLLANSKVEPIPWNQAEGDLTP 123 Query: 135 GEFDLILGADIIYLEETF 152 E ++G + E F Sbjct: 124 DEVVALVGQGLQEGERDF 141 >1WY7-A nrPDB Length = 207 Score = 28.1 bits (61), Expect = 2.9, Method: Compositional matrix adjust. Identities = 13/30 (43%), Positives = 19/30 (63%) Query: 63 ELRGRSAVELGAGTGLVGIVAALLGAHVTI 92 ++ G+ +LGAGTG++ A LLGA I Sbjct: 47 DIEGKVVADLGAGTGVLSYGALLLGAKEVI 76 >5UL4-A nrPDB Length = 744 Score = 27.7 bits (60), Expect = 3.6, Method: Composition-based stats. Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 20/95 (21%) Query: 53 LSTYL---EMGAVELRGRSAVELGAGTGLVGIVAALL-------GAHVTITDRKVALEFL 102 LS+YL ++ VEL +++ GT + I+ LL G V +K+A E L Sbjct: 143 LSSYLRKEQLAKVEL-----IDMQVGTTINQIIKNLLDSQPDIIGLSVNFGQKKLAFEIL 197 Query: 103 KSNVQANLPPHIQTKTVVKELTWGQNLGSFSPGEF 137 + HI+ + +T G + SFSP +F Sbjct: 198 DL-----IYSHIENGDLSSIITVGNVIPSFSPEQF 227 >1G6Q-1 nrPDB Length = 328 Score = 27.7 bits (60), Expect = 3.9, Method: Compositional matrix adjust. Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 64 LRGRSAVELGAGTGLVGIVAALLGA-HVTITDRKVALEFLKSNVQAN 109 + + +++G GTG++ + AA GA HV D +E K V+ N Sbjct: 37 FKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMSSIIEMAKELVELN 83 >5WP5-A nrPDB Length = 491 Score = 27.7 bits (60), Expect = 4.0, Method: Compositional matrix adjust. Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 8/45 (17%) Query: 66 GRSAVELGAGTG-LVGIVAALLGAHVTITDRKVALEFLKSNVQAN 109 G+S +ELGAG G G +A G +AL+F++S +Q N Sbjct: 54 GKSVLELGAGIGRFTGELAQKAG-------EVIALDFIESAIQKN 91 >4M8N-A nrPDB Length = 599 Score = 27.3 bits (59), Expect = 5.0, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 20/36 (55%) Query: 139 LILGADIIYLEETFTDLLQTLEHLCSNHSVILLACR 174 L L D++YL E DLLQ+L SN + LL R Sbjct: 129 LALHGDLLYLTEIMEDLLQSLMDQSSNANPKLLLRR 164 >2BGN-E nrPDB Length = 363 Score = 27.3 bits (59), Expect = 5.2, Method: Compositional matrix adjust. Identities = 22/104 (21%), Positives = 43/104 (41%), Gaps = 13/104 (12%) Query: 82 VAALLGAHVTITDRKVALEFLKSN-------VQANLPPHIQTKTVVKELTWGQNLGSFSP 134 + A+ G I +++A EF++ V+ PH+ + V+ + W Q G +P Sbjct: 69 MPAIAGCRDAI--KRIAYEFVEMKAKDGVVYVEVRYSPHLLANSKVEPIPWNQAEGDLTP 126 Query: 135 GEFDLILGADIIYLEETF----TDLLQTLEHLCSNHSVILLACR 174 E ++ + E F +L + H S S ++ C+ Sbjct: 127 DEVVSLVNQGLQEGERDFGVKVRSILCCMRHQPSWSSEVVELCK 170 >4LWO-B nrPDB Length = 368 Score = 26.9 bits (58), Expect = 6.0, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 5/82 (6%) Query: 32 QIRQDWRHLGVAAVVWDAAIVLSTY---LEMGAVELRGRSAVELGAGTGLVGIVAALLGA 88 Q + + L V ++ + A +S Y +E A + G+ V++G+GTG++ + AA GA Sbjct: 19 QYYESYSDLAVHRLMLEDAQRMSFYRKSIEQSA-SIEGKVVVDVGSGTGILSMWAARAGA 77 Query: 89 -HVTITDRKVALEFLKSNVQAN 109 HV + EF V+ N Sbjct: 78 KHVFSIEASSLSEFQIGVVEDN 99 >3CJ8-A nrPDB Length = 236 Score = 26.9 bits (58), Expect = 7.0, Method: Compositional matrix adjust. Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 5/53 (9%) Query: 49 AAIVLSTYLEMGAVELRGRSAV----ELGAGTGLVGIVAALLGAHVTITDRKV 97 A + T ++MGAV L GR+ V +GAGT L G++ A V I + V Sbjct: 122 AVVGAGTMIDMGAV-LGGRATVGKHCHIGAGTVLAGVIEPPSAAPVVIENEVV 173 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4LEC-A nrPDB 341 1e-94 4QPN-A nrPDB 284 2e-77 4MTL-A nrPDB 258 9e-70 4LG1-A nrPDB 241 1e-64 Sequences not found previously or not previously below threshold: 4PWY-A nrPDB 58 4e-09 4M36-A nrPDB 43 1e-04 3DMF-A nrPDB 42 1e-04 5EKU-A nrPDB 42 2e-04 3MGG-A nrPDB 38 0.003 5BP9-A nrPDB 35 0.017 3CJR-A nrPDB 35 0.029 1G6Q-1 nrPDB 33 0.083 3X0D-A nrPDB 33 0.087 3EGE-A nrPDB 33 0.12 5LV5-A nrPDB 33 0.12 5EGS-A nrPDB 33 0.12 4LWO-B nrPDB 32 0.15 5FUB-A nrPDB 32 0.17 6CU3-A nrPDB 32 0.24 2I6G-A nrPDB 31 0.36 6D00-1 nrPDB 31 0.37 4INE-A nrPDB 31 0.38 4KRI-A nrPDB 31 0.46 1F3L-A nrPDB 31 0.51 6OGN-A nrPDB 30 0.59 3Q7E-A nrPDB 30 0.65 4RYL-A nrPDB 30 0.75 5EVJ-A nrPDB 30 0.78 4QL6-A nrPDB 30 0.89 1R6B-X nrPDB 30 0.95 1L5X-A nrPDB 30 1.0 1WY7-A nrPDB 29 1.2 2IP2-A nrPDB 29 1.4 4JH6-A nrPDB 29 1.5 4HTF-A nrPDB 29 1.6 3CCF-A nrPDB 29 2.0 1DUS-A nrPDB 29 2.1 5DST-A nrPDB 29 2.1 1NHC-A nrPDB 29 2.2 4P7C-A nrPDB 28 2.7 5WP5-A nrPDB 28 3.5 5HTO-A nrPDB 28 3.5 2EFJ-A nrPDB 28 3.7 6GXV-A nrPDB 28 4.2 3L07-A nrPDB 27 7.9 >4LEC-A nrPDB Length = 212 Score = 341 bits (875), Expect = 1e-94, Method: Composition-based stats. Identities = 211/211 (100%), Positives = 211/211 (100%) Query: 8 ETTEFGLQKFHKPLATFSFANHTIQIRQDWRHLGVAAVVWDAAIVLSTYLEMGAVELRGR 67 ETTEFGLQKFHKPLATFSFANHTIQIRQDWRHLGVAAVVWDAAIVLSTYLEMGAVELRGR Sbjct: 2 ETTEFGLQKFHKPLATFSFANHTIQIRQDWRHLGVAAVVWDAAIVLSTYLEMGAVELRGR 61 Query: 68 SAVELGAGTGLVGIVAALLGAHVTITDRKVALEFLKSNVQANLPPHIQTKTVVKELTWGQ 127 SAVELGAGTGLVGIVAALLGAHVTITDRKVALEFLKSNVQANLPPHIQTKTVVKELTWGQ Sbjct: 62 SAVELGAGTGLVGIVAALLGAHVTITDRKVALEFLKSNVQANLPPHIQTKTVVKELTWGQ 121 Query: 128 NLGSFSPGEFDLILGADIIYLEETFTDLLQTLEHLCSNHSVILLACRIRYERDNNFLAML 187 NLGSFSPGEFDLILGADIIYLEETFTDLLQTLEHLCSNHSVILLACRIRYERDNNFLAML Sbjct: 122 NLGSFSPGEFDLILGADIIYLEETFTDLLQTLEHLCSNHSVILLACRIRYERDNNFLAML 181 Query: 188 ERQFTVRKVHYDPEKDVHIYEAQKRNQKEDL 218 ERQFTVRKVHYDPEKDVHIYEAQKRNQKEDL Sbjct: 182 ERQFTVRKVHYDPEKDVHIYEAQKRNQKEDL 212 >4QPN-A nrPDB Length = 227 Score = 284 bits (726), Expect = 2e-77, Method: Composition-based stats. Identities = 90/197 (45%), Positives = 125/197 (63%), Gaps = 6/197 (3%) Query: 22 ATFSFANHTIQIRQDW-RHLGVAAVVWDAAIVLSTYLEMGAVELRGRSAVELGAGTGLVG 80 + F F H + I Q++ LGVAA VWDAA+ L Y E V+ RG+ +ELGAGTG+VG Sbjct: 32 SQFCFCGHVLTITQNFGSRLGVAARVWDAALSLCNYFESQNVDFRGKKVIELGAGTGIVG 91 Query: 81 IVAALLGAHVTITDRKVALEFLKSNVQANLPPHIQTKTVVKELTWGQNLGSFSPGEFDLI 140 I+AAL G VTITD +ALE ++ NVQAN+P Q + V+ L+WG + F P +DL+ Sbjct: 92 ILAALQGGDVTITDLPLALEQIQGNVQANVPAGGQAQ--VRALSWGIDHHVF-PANYDLV 148 Query: 141 LGADIIYLEETFTDLLQTLEHLCSNHSVILLACRIRYER--DNNFLAMLERQFTVRKVHY 198 LGADI+YLE TF LL TL+HLC H I LA ++R E ++ F +L + F + Sbjct: 149 LGADIVYLEPTFPLLLGTLQHLCRPHGTIYLASKMRKEHGTESFFQHLLPQHFQLELAQR 208 Query: 199 DPEKDVHIYEAQKRNQK 215 D +++V+IY A+ R + Sbjct: 209 DEDENVNIYRARHREPR 225 >4MTL-A nrPDB Length = 244 Score = 258 bits (660), Expect = 9e-70, Method: Composition-based stats. Identities = 66/191 (34%), Positives = 96/191 (50%), Gaps = 7/191 (3%) Query: 24 FSFANHTIQIRQDWRHLGVAAVVWDAAIVLSTYLEMGAVELRGRSA--VELGAGTGLVGI 81 + FA I I++ G AVVW A+ L YLE A EL + A +E+GAG GLV I Sbjct: 51 YRFAGKEIVIQESIESYG--AVVWPGAMALCQYLEEHAEELNFQDAKILEIGAGPGLVSI 108 Query: 82 VAALLGAHVTITDRKVALEFLKSNVQANLPPHIQTKTVVKELTWGQNLGSFSPGE---FD 138 VA++LGA VT TD L L+ N+ N VKEL WG++L P +D Sbjct: 109 VASILGAQVTATDLPDVLGNLQYNLLKNTLQCTAHLPEVKELVWGEDLDKNFPKSAFYYD 168 Query: 139 LILGADIIYLEETFTDLLQTLEHLCSNHSVILLACRIRYERDNNFLAMLERQFTVRKVHY 198 +L +D++Y LL T+ +L +V+L A + R+ D FL ++ F + Sbjct: 169 YVLASDVVYHHYFLDKLLTTMVYLSQPGTVLLWANKFRFSTDYEFLDKFKQVFDTTLLAE 228 Query: 199 DPEKDVHIYEA 209 PE V +++ Sbjct: 229 YPESSVKLFKG 239 >4LG1-A nrPDB Length = 224 Score = 241 bits (616), Expect = 1e-64, Method: Composition-based stats. Identities = 77/206 (37%), Positives = 109/206 (52%), Gaps = 21/206 (10%) Query: 28 NHTIQIRQDWRHLGVAAVVWDAAIVLSTYLEM------GAVELRGRSAVELGAGTGLVGI 81 + T+ Q + GV VVWDAAIVLS YLE GA L RS +ELG+GTG VG+ Sbjct: 19 DGTVLRLQQYSSGGVGCVVWDAAIVLSKYLETPEFSGDGAHALSRRSVLELGSGTGAVGL 78 Query: 82 VAALLGAHVTITDRKVALEFLKSNVQANLPPHIQTKTV-VKELTWGQNLGSFSPGEFDLI 140 +AA LGA V +TD + + LK N+ N+ H+ T +V K L WG+ + F P D I Sbjct: 79 MAATLGADVVVTDLEELQDLLKMNI--NMNKHLVTGSVQAKVLKWGEEIEGF-PSPPDFI 135 Query: 141 LGADIIYLEETFTDLLQTLEHLCSNHSVILLACRIRY-----ERDNNFLAMLERQFTVRK 195 L AD IY EE+ LL+TL+ + + I+ R E + + +L+ F K Sbjct: 136 LMADCIYYEESLEPLLKTLKDISGFETCIICCYEQRTMGKNPEIEKKYFELLQLDFDFEK 195 Query: 196 V---HYDPE---KDVHIYEAQKRNQK 215 + +D E +D+HI +K+ K Sbjct: 196 IPLEKHDEEYRSEDIHIIYIRKKKSK 221 >4PWY-A nrPDB Length = 264 Score = 57.8 bits (138), Expect = 4e-09, Method: Composition-based stats. Identities = 35/193 (18%), Positives = 78/193 (40%), Gaps = 8/193 (4%) Query: 33 IRQDWRHLGVAAVVWDAAIVLSTYLEMGAVELRGRSAVELGAG-TGLVGIVAALLG--AH 89 + + + G +W + VL+ Y R + ELG G T L G++ A+ Sbjct: 56 VLTSFDNTGNVC-IWPSEEVLAYYCLKHNNIFRALAVCELGGGMTCLAGLMVAISADVKE 114 Query: 90 VTITD-RKVALEFLKSNVQANLPPHIQTKTVVKE--LTWGQNLGSF-SPGEFDLILGADI 145 V +TD + A+ ++ + N + + L W G FD+++ AD Sbjct: 115 VLLTDGNEKAIRNVQDIITRNQKAGVFKTQKISSCFLRWDNETDVSQLEGHFDIVMCADC 174 Query: 146 IYLEETFTDLLQTLEHLCSNHSVILLACRIRYERDNNFLAMLERQFTVRKVHYDPEKDVH 205 ++L++ L+ ++ L ++ R N F + E+ + H + ++ + Sbjct: 175 LFLDQYRASLVDAIKRLLQPRGKAMVFAPRRGNTLNQFCNLAEKAGFCIQRHENYDEHIS 234 Query: 206 IYEAQKRNQKEDL 218 + ++ + + D+ Sbjct: 235 NFHSKLKKENPDI 247 >4M36-A nrPDB Length = 343 Score = 42.8 bits (99), Expect = 1e-04, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 48/107 (44%), Gaps = 8/107 (7%) Query: 69 AVELGAGTGLVGIVAALLGAH--VTITDRKVALEFLKSNVQANLPPHIQTKTVVKELTWG 126 +E+GAG+GL+ ++AA LGA V + + + + N++AN +++ + V + Sbjct: 64 VLEIGAGSGLLSLMAAKLGAKWVVAVEGSEELAKLARENIRAN---NMEHQVKVLHMMST 120 Query: 127 QNLGSFSPGEFDLILG---ADIIYLEETFTDLLQTLEHLCSNHSVIL 170 + P D++L ++ E ++ L + I+ Sbjct: 121 ELKSKHLPEPPDVLLSEIFGTMMLGESALDYVVDVRNRLLKPTTKII 167 >3DMF-A nrPDB Length = 381 Score = 42.4 bits (98), Expect = 1e-04, Method: Composition-based stats. Identities = 38/175 (21%), Positives = 62/175 (35%), Gaps = 15/175 (8%) Query: 43 AAVVWDAAIVLSTYLEM--GAVELRGRSAVELGAGTGLVGIVAALLGAHVTIT--DRKVA 98 A V A+++L L+ G +RGR ++LGAG G + + A +GA V D Sbjct: 209 AGKVDPASLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARMGAEVVGVEDDLASV 268 Query: 99 LEFLKSNVQANLPPHIQ-TKTVVKELTWGQNLGSFSPGEFDLILGADIIYLEETFTDLLQ 157 L L+ ++AN V + LT + GA I+ + + F ++ Sbjct: 269 LS-LQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAA 327 Query: 158 TLEHLCSNHSVILLACRIRYERDNNFLAMLERQFTVRKVHYDPEKDVHIYEAQKR 212 V L + + F KV + A+KR Sbjct: 328 ARL---RPGGVFFLVSNPFLKYEPLLEEKFG-AFQTLKVAEY-----KVLFAEKR 373 >5EKU-A nrPDB Length = 390 Score = 42.4 bits (98), Expect = 2e-04, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 48/107 (44%), Gaps = 8/107 (7%) Query: 69 AVELGAGTGLVGIVAALLGAH--VTITDRKVALEFLKSNVQANLPPHIQTKTVVKELTWG 126 +E+GAG+GL+ ++AA LGA V + + + + N++AN +++ + V + Sbjct: 99 VLEIGAGSGLLSLMAAKLGAKWVVAVEGSEELAKLARENIRAN---NMEHQVKVLHMMST 155 Query: 127 QNLGSFSPGEFDLILG---ADIIYLEETFTDLLQTLEHLCSNHSVIL 170 + P D++L ++ E ++ L + I+ Sbjct: 156 ELKPKHLPEPPDVLLSEIFGTMMLGESALDYVVDVRNRLLKPTTKII 202 >3MGG-A nrPDB Length = 276 Score = 37.8 bits (86), Expect = 0.003, Method: Composition-based stats. Identities = 27/130 (20%), Positives = 45/130 (34%), Gaps = 9/130 (6%) Query: 43 AAVVWDAAIVLSTYLEMGAVELRGRSAVELGAGTGLVGIVAALLGAHVTITDR---KVAL 99 A + + A L L V G +E G G G ++ A IT +L Sbjct: 15 ALRLSEQAETLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESL 74 Query: 100 EFLKSNVQANLPPHIQTKTVVKELTWGQNLGSFSPGEFDLILGADIIYLEETFTDLLQTL 159 E + N + N + VK L F FD I ++ ++ + L++L Sbjct: 75 EKARENTEKNGIKN------VKFLQANIFSLPFEDSSFDHIFVCFVLEHLQSPEEALKSL 128 Query: 160 EHLCSNHSVI 169 + + I Sbjct: 129 KKVLKPGGTI 138 >5BP9-A nrPDB Length = 281 Score = 35.5 bits (80), Expect = 0.017, Method: Composition-based stats. Identities = 27/132 (20%), Positives = 50/132 (37%), Gaps = 19/132 (14%) Query: 57 LEMGAVELRGRSAVELGAGTGLVGIVAALLGAHVTITDR-KVALEFLKSNVQANLPPHIQ 115 LE A+ + + +++GAG+G + G V+ D +++E +K Sbjct: 93 LERTALAMATGTILDVGAGSGCHALALQESGKEVSAIDISPLSVEVMK------------ 140 Query: 116 TKTVVKELTWGQNLGSFSPGEFDLIL----GADIIYLEETFTDLLQTLEHLCSNHSVILL 171 VK+ FD IL G+ II E + ++ L IL+ Sbjct: 141 -LRGVKDARQVNLFDERFAATFDTILMLMNGSGIIGRLENMPLFFRKMKQLLRPDGCILM 199 Query: 172 -ACRIRYERDNN 182 + +RY ++ Sbjct: 200 DSSDLRYLFEDE 211 >3CJR-A nrPDB Length = 254 Score = 34.7 bits (78), Expect = 0.029, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 35/91 (38%), Gaps = 11/91 (12%) Query: 66 GRSAVELGAGTGLVGIVAALLGAHVTITDR-KVALEFLKSNVQAN-LPPHIQTKTVVKEL 123 G ++LG G+G++ I A LG D + L ++N + N + P ++ L Sbjct: 121 GDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAAL 180 Query: 124 TWGQNLGSFSPGEFDLILGADIIYLEETFTD 154 +G FDL++ L Sbjct: 181 PFG---------PFDLLVANLYAELHAALAP 202 >1G6Q-1 nrPDB Length = 328 Score = 33.1 bits (74), Expect = 0.083, Method: Composition-based stats. Identities = 25/111 (22%), Positives = 44/111 (39%), Gaps = 9/111 (8%) Query: 64 LRGRSAVELGAGTGLVGIVAALLGA-HVTITDRKVALEFLKSNVQANLPPHIQTKTVVKE 122 + + +++G GTG++ + AA GA HV D +E K V+ N T K Sbjct: 37 FKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKL 96 Query: 123 LTWGQNLGSFSPGEFDLILGADIIY---LEETFTDLLQTLEHLCSNHSVIL 170 +++ P D+I+ + Y E +L +H +I Sbjct: 97 ----EDVHLPFPK-VDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIF 142 >3X0D-A nrPDB Length = 655 Score = 33.1 bits (74), Expect = 0.087, Method: Composition-based stats. Identities = 23/94 (24%), Positives = 38/94 (40%), Gaps = 18/94 (19%) Query: 69 AVELGAGTGLVGIVAALLGAH-VTITDRKVALEFLKSNVQANLPPHIQTKTVVKELTWGQ 127 +++G GTGL+ ++AA GA VT + + ++ +N P W Sbjct: 76 VLDIGTGTGLLSLMAAREGADKVTALEVFKPMGDCARHITSNSP-------------WSD 122 Query: 128 NLGSFSPGEFDLILG----ADIIYLEETFTDLLQ 157 + S D+ ADII E T+L+ Sbjct: 123 KITVISERSTDVSQIGGSRADIIVAEVFDTELIG 156 >3EGE-A nrPDB Length = 261 Score = 32.8 bits (73), Expect = 0.12, Method: Composition-based stats. Identities = 20/152 (13%), Positives = 51/152 (33%), Gaps = 11/152 (7%) Query: 65 RGRSAVELGAGTGLVGIVAALLGAHVTITDRKVALEFLKSNVQANLPPHIQTKTVVKELT 124 +G ++GAGTG + A G V + + + + V Sbjct: 34 KGSVIADIGAGTGGYSVALANQGLFVYAVEPSIVMRQ----------QAVVHPQVEWFTG 83 Query: 125 WGQNLGSFSPGEFDLILGADIIYLEETFTDLLQTLEHLCSNHSVILLACRIRYERDNNFL 184 + +NL + D ++ I+ Q ++ + + +++LL IR + Sbjct: 84 YAENL-ALPDKSVDGVISILAIHHFSHLEKSFQEMQRIIRDGTIVLLTFDIRLAQRIWLY 142 Query: 185 AMLERQFTVRKVHYDPEKDVHIYEAQKRNQKE 216 + ++ +++ + + + E Sbjct: 143 DYFPFLWEDALRFLPLDEQINLLQENTKRRVE 174 >5LV5-A nrPDB Length = 403 Score = 32.8 bits (73), Expect = 0.12, Method: Composition-based stats. Identities = 12/26 (46%), Positives = 19/26 (73%) Query: 63 ELRGRSAVELGAGTGLVGIVAALLGA 88 LRG++ +++GAGTG++ I A GA Sbjct: 108 ALRGKTVLDVGAGTGILSIFCAQAGA 133 >5EGS-A nrPDB Length = 376 Score = 32.8 bits (73), Expect = 0.12, Method: Composition-based stats. Identities = 12/26 (46%), Positives = 19/26 (73%) Query: 63 ELRGRSAVELGAGTGLVGIVAALLGA 88 LRG++ +++GAGTG++ I A GA Sbjct: 81 ALRGKTVLDVGAGTGILSIFCAQAGA 106 >4LWO-B nrPDB Length = 368 Score = 32.4 bits (72), Expect = 0.15, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 35 QDWRHLGVAAVVWDAAIVLSTYLE--MGAVELRGRSAVELGAGTGLVGIVAALLGA-HVT 91 + + L V ++ + A +S Y + + + G+ V++G+GTG++ + AA GA HV Sbjct: 22 ESYSDLAVHRLMLEDAQRMSFYRKSIEQSASIEGKVVVDVGSGTGILSMWAARAGAKHVF 81 Query: 92 ITDRKVALEFLKSNVQAN 109 + EF V+ N Sbjct: 82 SIEASSLSEFQIGVVEDN 99 >5FUB-A nrPDB Length = 337 Score = 32.4 bits (72), Expect = 0.17, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 42/103 (40%), Gaps = 11/103 (10%) Query: 59 MGAVELRGRSAVELGAGTGLVGIVAALLG--AHVTITDRKVALEFLKSNVQANLPPHIQT 116 + LR + ++LG GTG++ + ALL A V + E + V+ N + T Sbjct: 38 SNSAALREKVVLDLGCGTGVISLFCALLAKPAGVYAVEASSMAEHTEELVKQNGCDGVVT 97 Query: 117 KTVVKELTWGQNLGSFSPGEFDLIL---GADIIYLEETFTDLL 156 + +NL P + D+++ + + E +L Sbjct: 98 VFQERA----ENLT--LPTKVDVLVSEWMGNCLLFEYMLESVL 134 >6CU3-A nrPDB Length = 336 Score = 31.6 bits (70), Expect = 0.24, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 42/115 (36%), Gaps = 10/115 (8%) Query: 62 VELRGRSAVELGAGTGLVGIVAALLGAH-VTITDRKVALEFLKSNVQANLPPHIQTKTVV 120 + + +++G GTG++ + AA GA V D ++ + V N H+ Sbjct: 48 HLFKDKVVLDIGCGTGILCLFAAKAGAKRVIGIDMSDIIDKARQIVSDNGYSHVIELIKG 107 Query: 121 KELTWGQNLGS--FSPGEFDLILGADIIY---LEETFTDLLQTLEHLCSNHSVIL 170 K +++ F + D+I+ + Y E +L + + Sbjct: 108 KV----EDIAQLPFGIEKVDIIISEWMGYFLLYESMLQTVLSARDRWLRPGGYLF 158 >2I6G-A nrPDB Length = 199 Score = 31.2 bits (69), Expect = 0.36, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 40/102 (39%), Gaps = 12/102 (11%) Query: 70 VELGAGTGLVGIVAALLGAHVTITDR-KVALEFLKSNVQANLPPHIQTKTVVKELTWGQN 128 ++LG G G + A G VT D+ ++ L+ A ++QT V + Sbjct: 36 LDLGCGNGRNSLYLAANGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLV--------D 87 Query: 129 LGSF-SPGEFDLILGADIIYLEE--TFTDLLQTLEHLCSNHS 167 L + GE+D IL ++ E T L+ ++ Sbjct: 88 LNTLTFDGEYDFILSTVVMMFLEAQTIPGLIANMQRCTKPGG 129 >6D00-1 nrPDB Length = 883 Score = 31.2 bits (69), Expect = 0.37, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 22/78 (28%) Query: 13 GLQKFHKPLATFSF-----ANHTIQIRQDWRHLGVAAVVW--DAAIV---LSTYLEMGAV 62 GLQ ++PLA+F F T+ +++ +AA ++ AIV +S Y+E AV Sbjct: 592 GLQNRNRPLASFLFLGPTGCGKTLCVKE------LAAFLFNDPGAIVRIDMSEYMEKHAV 645 Query: 63 ELRGRSAVELGAGTGLVG 80 +GA G +G Sbjct: 646 SRL------VGAPPGYIG 657 >4INE-A nrPDB Length = 454 Score = 31.2 bits (69), Expect = 0.38, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 37/109 (33%), Gaps = 10/109 (9%) Query: 66 GRSAVELGAGTGL-VGIVAALLGAHVTITDRKVALEFLKSNVQANLPP--HIQTKTVVKE 122 G++ +++G G G VA G HV D L SN+ A H + + VK Sbjct: 242 GQTMLDIGVGIGGGARQVADEFGVHVHGID-------LSSNMLAIALERLHEEKDSRVKY 294 Query: 123 LTWGQNLGSFSPGEFDLILGADIIYLEETFTDLLQTLEHLCSNHSVILL 171 + F FD + D I L + +L+ Sbjct: 295 SITDALVYQFEDNSFDYVFSRDCIQHIPDTEKLFSRIYKALKPGGKVLI 343 >4KRI-A nrPDB Length = 433 Score = 30.8 bits (68), Expect = 0.46, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 36/112 (32%), Gaps = 16/112 (14%) Query: 66 GRSAVELGAGTGLVGIVAA------LLGAHVTITDRKVALEFLKSNVQANLPPHIQTKTV 119 G+ +++G G G AA + G ++ VALE + A + + Sbjct: 223 GQRMLDIGVGIGGGARQAASEFGLQVHGVDLSTNMLAVALERVHKEKDARVTYAVCDACE 282 Query: 120 VKELTWGQNLGSFSPGEFDLILGADIIYLEETFTDLLQTLEHLCSNHSVILL 171 + F P FD + D I + L + +L+ Sbjct: 283 YE----------FEPNSFDYVFSRDCIQHIKDTDKLFSRIYRALKPGGKVLI 324 >1F3L-A nrPDB Length = 321 Score = 30.8 bits (68), Expect = 0.51, Method: Composition-based stats. Identities = 18/107 (16%), Positives = 41/107 (38%), Gaps = 7/107 (6%) Query: 56 YLEMGAVELRGRSAVELGAGTGLVGIVAALLGA-HVTITDRKVALEFLKSNVQANLPPHI 114 ++ + + +++G GTG++ + AA GA V D+ L ++ N Sbjct: 36 FIYQNPHIFKDKVVLDVGCGTGILSMFAAKAGAKKVIAVDQSEILYQAMDIIRLNKLEDT 95 Query: 115 QTKTVVKELTWGQNLGSFSPGEFDLILGADIIYLEETFTDLLQTLEH 161 L G+ P E ++ ++ + F +L ++ + Sbjct: 96 I------VLIKGKIEEVSLPVEKVDVIISEWMGYFLLFESMLDSVLY 136 >6OGN-A nrPDB Length = 692 Score = 30.5 bits (67), Expect = 0.59, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 12/74 (16%) Query: 17 FHKPLATFSFANHTIQIRQDWRHL-GVAAVVWDAAIVLSTYLEMGAVELRGRSAVELGAG 75 +H+ +A S+A+ ++ ++ G+ A V S + G L +++G G Sbjct: 26 YHQEIARSSYADMLHDKDRNIKYYQGIRAAV-------SRVKDRGQKAL----VLDIGTG 74 Query: 76 TGLVGIVAALLGAH 89 TGL+ ++A GA Sbjct: 75 TGLLSMMAVTAGAD 88 >3Q7E-A nrPDB Length = 349 Score = 30.5 bits (67), Expect = 0.65, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 44/101 (43%), Gaps = 7/101 (6%) Query: 62 VELRGRSAVELGAGTGLVGIVAALLGA-HVTITDRKVALEFLKSNVQANLPPHIQTKTVV 120 + + +++G+GTG++ + AA GA V + ++ V+AN H+ T Sbjct: 63 HLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKG 122 Query: 121 KELTWGQNLGSFSPGEFDLILGADIIYLEETFTDLLQTLEH 161 K + + P E I+ ++ + + +L T+ H Sbjct: 123 KV----EEVE--LPVEKVDIIISEWMGYCLFYESMLNTVLH 157 >4RYL-A nrPDB Length = 340 Score = 30.1 bits (66), Expect = 0.75, Method: Composition-based stats. Identities = 23/130 (17%), Positives = 49/130 (37%), Gaps = 10/130 (7%) Query: 36 DWRHLGVAAVVWDAAIVLSTYLE---MGAVELRGRSAVELGAGTGLVGIVAALLGA-HVT 91 + H G+ + I +Y + + + +++G GTG++ + AA GA V Sbjct: 32 SYGHYGIHEEMLKDKIRTESYRDFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAGAKKVL 91 Query: 92 ITDRKVALEFLKSNVQANLPPHIQTKTVVKELTWGQNLGSFSPGEFDLILGADIIYLEET 151 D+ L ++ N T L G+ P E ++ ++ + Sbjct: 92 GVDQSEILYQAMDIIRLNKLEDTIT------LIKGKIEEVHLPVEKVDVIISEWMGYFLL 145 Query: 152 FTDLLQTLEH 161 F +L ++ + Sbjct: 146 FESMLDSVLY 155 >5EVJ-A nrPDB Length = 387 Score = 30.1 bits (66), Expect = 0.78, Method: Composition-based stats. Identities = 21/112 (18%), Positives = 41/112 (36%), Gaps = 8/112 (7%) Query: 64 LRGRSAVELGAGTG--------LVGIVAALLGAHVTITDRKVALEFLKSNVQANLPPHIQ 115 + G ++LGAG+G LVG ++ G +T +VA+ + + L Sbjct: 82 IEGLRVLDLGAGSGRDAYVAAKLVGEKGSVTGVDMTPAQLEVAISHADAYARDKLGYGKS 141 Query: 116 TKTVVKELTWGQNLGSFSPGEFDLILGADIIYLEETFTDLLQTLEHLCSNHS 167 T ++ + FDL++ +I L +L + + Sbjct: 142 NMTFIQGEIEYLDRAGLEDSSFDLVISNCVINLSPDKARVLSEAYRVLAPGG 193 >4QL6-A nrPDB Length = 634 Score = 29.7 bits (65), Expect = 0.89, Method: Composition-based stats. Identities = 15/97 (15%), Positives = 38/97 (39%), Gaps = 10/97 (10%) Query: 114 IQTKTVVKELTWGQNLGSFSPGEFDLILGADIIYLEETFTDLLQTLEHLCSNHSVILLAC 173 + K W ++ ++DL+L IYLE+ + + H ++ L Sbjct: 118 MSHTIEKKPSAWASSIEEVKQRQYDLLLSYASIYLEDAAKN-----RYQGKEHGLVKLCI 172 Query: 174 RIRYERDNNFLAMLERQFTVRKVHYDPEKDVHIYEAQ 210 R +N ++ + + + + PE++ + + + Sbjct: 173 RQIENHENPYIGINDHGYRMS-----PEEEANSFHVR 204 >1R6B-X nrPDB Length = 758 Score = 29.7 bits (65), Expect = 0.95, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 33/85 (38%), Gaps = 15/85 (17%) Query: 13 GLQKFHKPLATFSFA-----NHTIQIRQDWRHLGVAAVVWDAAIVLSTYLEMGAVELRGR 67 GL HKP+ +F FA T Q + LG+ + +D +S Y+E V Sbjct: 480 GLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFD----MSEYMERHTVSRL-- 533 Query: 68 SAVELGAGTGLVGIVAALLGAHVTI 92 +GA G VG L I Sbjct: 534 ----IGAPPGYVGFDQGGLLTDAVI 554 >1L5X-A nrPDB Length = 280 Score = 29.7 bits (65), Expect = 1.0, Method: Composition-based stats. Identities = 27/113 (23%), Positives = 49/113 (43%), Gaps = 11/113 (9%) Query: 12 FGL-QKFHKPLATFSFANHT-IQIRQDWRHLGVA---AVVWDAAIVLSTYLEMGAVELRG 66 FGL +K+ L+ + ++T +Q+ LG A A++ A+ S YLE L Sbjct: 79 FGLGRKYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPALAYSAYLENWNELLNN 138 Query: 67 RSAVELGAGTGLVGIVAALLGAHVTITDRKVALEFLKSNVQANLPPHIQTKTV 119 + AVE+ +G V + ++V ++ + N L ++ K V Sbjct: 139 KEAVEI------MGAVVSSTASYVLKNGMPQGVDVISVNFPRRLGRGVRAKLV 185 >1WY7-A nrPDB Length = 207 Score = 29.3 bits (64), Expect = 1.2, Method: Composition-based stats. Identities = 13/30 (43%), Positives = 19/30 (63%) Query: 63 ELRGRSAVELGAGTGLVGIVAALLGAHVTI 92 ++ G+ +LGAGTG++ A LLGA I Sbjct: 47 DIEGKVVADLGAGTGVLSYGALLLGAKEVI 76 >2IP2-A nrPDB Length = 334 Score = 29.3 bits (64), Expect = 1.4, Method: Composition-based stats. Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 9/86 (10%) Query: 63 ELRGRSAVELGAGTGLV--GIVAALLGAHVTITDRKVALEFLKSNVQANLPPHIQTKTVV 120 + RGRS V++G G+G + I+ A A + DR+ +L + N+ + + V Sbjct: 165 DFRGRSFVDVGGGSGELTKAILQAEPSARGVMLDREGSLGVARDNLSS-----LLAGERV 219 Query: 121 KELTWGQNLGSFSPGEFDLILGADII 146 + G ++ P D+ L + II Sbjct: 220 SLV--GGDMLQEVPSNGDIYLLSRII 243 >4JH6-A nrPDB Length = 138 Score = 29.3 bits (64), Expect = 1.5, Method: Composition-based stats. Identities = 20/101 (19%), Positives = 36/101 (35%), Gaps = 14/101 (13%) Query: 126 GQNLGSFSPGEFDLILGADIIYLEETFT-DLLQTLEHLCSNHSVILLAC---RIRYERDN 181 G N FS L I + E+ +LL L + + I R+ Sbjct: 4 GINHLCFSVSN----LEDSIEFYEKVLEGELLVRGRKLAYFNICGVWVALNEEIHIPRNE 59 Query: 182 NFLAMLERQFTVR------KVHYDPEKDVHIYEAQKRNQKE 216 + + F+V + E DVHI + ++R+ ++ Sbjct: 60 IYQSYTHIAFSVEQKDFESLLQRLEENDVHILKGRERDVRD 100 >4HTF-A nrPDB Length = 285 Score = 28.9 bits (63), Expect = 1.6, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 43/116 (37%), Gaps = 14/116 (12%) Query: 58 EMGAVELRGRSAVELGAGTGLVGIVAALLGAHVTITDRKVALEFLKSNVQANLPPHIQTK 117 EMG +LR ++ G G G I A G V + D L + + + K Sbjct: 64 EMGPQKLR---VLDAGGGEGQTAIKMAERGHQVILCD-------LSAQMIDRAKQAAEAK 113 Query: 118 TVVKELTW----GQNLGSFSPGEFDLILGADIIYLEETFTDLLQTLEHLCSNHSVI 169 V + + Q++ S DLIL ++ +LQTL + V+ Sbjct: 114 GVSDNMQFIHCAAQDVASHLETPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVL 169 >3CCF-A nrPDB Length = 279 Score = 28.5 bits (62), Expect = 2.0, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 28/69 (40%), Gaps = 9/69 (13%) Query: 35 QDWRHLGVAAVVWDAAIV------LSTYLEMGAVELR---GRSAVELGAGTGLVGIVAAL 85 Q +LG A WDA + + Y E L G ++LG GTG + A Sbjct: 18 QGMTNLGTAKNFWDATLYQDKHSFVWQYGEDLLQLLNPQPGEFILDLGCGTGQLTEKIAQ 77 Query: 86 LGAHVTITD 94 GA V TD Sbjct: 78 SGAEVLGTD 86 >1DUS-A nrPDB Length = 194 Score = 28.5 bits (62), Expect = 2.1, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 5/54 (9%) Query: 68 SAVELGAGTGLVGI-----VAALLGAHVTITDRKVALEFLKSNVQANLPPHIQT 116 ++LG G G++GI V + A + K+A E +K N N + Sbjct: 55 DILDLGCGYGVIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVH 108 >5DST-A nrPDB Length = 332 Score = 28.5 bits (62), Expect = 2.1, Method: Composition-based stats. Identities = 8/27 (29%), Positives = 17/27 (62%) Query: 62 VELRGRSAVELGAGTGLVGIVAALLGA 88 + + +++G+GTG++ + AA GA Sbjct: 46 HVFKDKVVLDVGSGTGILSMFAAKAGA 72 >1NHC-A nrPDB Length = 336 Score = 28.5 bits (62), Expect = 2.2, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 22/46 (47%) Query: 4 VPYEETTEFGLQKFHKPLATFSFANHTIQIRQDWRHLGVAAVVWDA 49 + +E TT FG +++ PL F + T+ + G + WD+ Sbjct: 45 ITFEGTTSFGYKEWKGPLIRFGGKDLTVTMADGAVIDGDGSRWWDS 90 >4P7C-A nrPDB Length = 322 Score = 28.1 bits (61), Expect = 2.7, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 38/99 (38%), Gaps = 4/99 (4%) Query: 63 ELRGRSAVELGAGTGLVGIVAALLGAHVTITDRKVALEFLKSNVQANLPPHIQTKTVVKE 122 +L+G+ +++G G G GA I L F + P + + Sbjct: 119 DLKGKRVLDVGCGNGYYQWRMLGAGADSVIGVDPNWLFFCQFQAMQRYLPDLPAWHLPFA 178 Query: 123 LTWGQNLGSFSPGEFDLILGADIIYLEETFTDLLQTLEH 161 L ++L + G FD + ++Y ++ D L L+ Sbjct: 179 L---EDLPANLEG-FDTVFSMGVLYHRKSPIDHLLALKD 213 >5WP5-A nrPDB Length = 491 Score = 27.8 bits (60), Expect = 3.5, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 6/46 (13%) Query: 64 LRGRSAVELGAGTGLVGIVAALLGAHVTITDRKVALEFLKSNVQAN 109 G+S +ELGAG G A V AL+F++S +Q N Sbjct: 52 YEGKSVLELGAGIGRFTGELAQKAGEVI------ALDFIESAIQKN 91 >5HTO-A nrPDB Length = 346 Score = 27.8 bits (60), Expect = 3.5, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 39/99 (39%), Gaps = 9/99 (9%) Query: 56 YLEMGAVELRGRSAVELGAGTGLVGIVAALLGAHVTITDRKVALEFLKSNVQANLPPHIQ 115 Y + G++ + + + G+G++G V A L + D + +V N+P Sbjct: 25 YFQRGSMTPKPKIVL---VGSGMIGGVMATLIVQKNLGDV------VMFDVVKNMPQGKA 75 Query: 116 TKTVVKELTWGQNLGSFSPGEFDLILGADIIYLEETFTD 154 T + N +D + GAD++ + FT Sbjct: 76 LDTSHSNVMAYSNCKVTGSNSYDDLKGADVVIVTAGFTK 114 >2EFJ-A nrPDB Length = 384 Score = 27.8 bits (60), Expect = 3.7, Method: Composition-based stats. Identities = 10/70 (14%), Positives = 18/70 (25%) Query: 132 FSPGEFDLILGADIIYLEETFTDLLQTLEHLCSNHSVILLACRIRYERDNNFLAMLERQF 191 F + ++ L T + N I + R +L + F Sbjct: 145 FPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDF 204 Query: 192 TVRKVHYDPE 201 T + E Sbjct: 205 TTFLRIHSEE 214 >6GXV-A nrPDB Length = 484 Score = 27.8 bits (60), Expect = 4.2, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 17/44 (38%), Gaps = 3/44 (6%) Query: 107 QANLPPHIQTKTVVKELTWGQNLGSFSPGEFDLILGADIIYLEE 150 Q+ + K W + + G +D ++GADI Y Sbjct: 169 QSRQLSGKIYQIQGKAWDWEVDSEN---GNYDYLMGADIDYDHP 209 >3L07-A nrPDB Length = 285 Score = 26.6 bits (57), Expect = 7.9, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 31/82 (37%), Gaps = 7/82 (8%) Query: 85 LLGAHVTITDRKVALEFLKSN-------VQANLPPHIQTKTVVKELTWGQNLGSFSPGEF 137 L H T ++ ++ L ++ VQ LP HI V+ + +++ F P Sbjct: 70 TLPEHTTESELLELIDQLNNDSSVHAILVQLPLPAHINKNNVIYSIKPEKDVDGFHPTNV 129 Query: 138 DLILGADIIYLEETFTDLLQTL 159 + D LE + T+ Sbjct: 130 GRLQLRDKKCLESCTPKGIMTM 151 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.309 0.131 0.338 Lambda K H 0.267 0.0406 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 7,537,614 Number of Sequences: 36641 Number of extensions: 273462 Number of successful extensions: 843 Number of sequences better than 10.0: 47 Number of HSP's better than 10.0 without gapping: 35 Number of HSP's successfully gapped in prelim test: 36 Number of HSP's that attempted gapping in prelim test: 789 Number of HSP's gapped (non-prelim): 72 length of query: 218 length of database: 10,336,785 effective HSP length: 93 effective length of query: 125 effective length of database: 6,929,172 effective search space: 866146500 effective search space used: 866146500 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 57 (26.6 bits)