BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q8TBX8 (421 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 2GK9-A nrPDB 806 0.0 3X07-A nrPDB 494 e-140 2YBX-A nrPDB 461 e-130 6CMW-A nrPDB 170 1e-42 4HZI-A nrPDB 33 0.16 1A47-A nrPDB 32 0.51 1CYG-A nrPDB 31 1.1 3R31-A nrPDB 29 4.0 5FWK-A nrPDB 29 4.3 5NBS-A nrPDB 29 4.5 3CYM-A nrPDB 28 6.2 6FEC-u nrPDB 28 6.9 3PRY-A nrPDB 28 8.4 1UHG-A nrPDB 28 9.1 >2GK9-A nrPDB Length = 392 Score = 806 bits (2082), Expect = 0.0, Method: Compositional matrix adjust. Identities = 389/390 (99%), Positives = 390/390 (100%) Query: 32 HFVQQKVKVFRAADPLVGVFLWGVAHSINELSQVPPPVMLLPDDFKASSKIKVNNHLFHR 91 HFVQQKVKVFRAADPLVGVFLWGVAHSINELSQVPPPVMLLPDDFKASSKIKVNNHLFHR Sbjct: 3 HFVQQKVKVFRAADPLVGVFLWGVAHSINELSQVPPPVMLLPDDFKASSKIKVNNHLFHR 62 Query: 92 ENLPSHFKFKEYCPQVFRNLRDRFGIDDQDYLVSLTRNPPSESEGSDGRFLISYDRTLVI 151 ENLPSHFKFKEYCPQVFRNLRDRFGIDDQDYLVSLTRNPPSESEGSDGRFLISYDRTLVI Sbjct: 63 ENLPSHFKFKEYCPQVFRNLRDRFGIDDQDYLVSLTRNPPSESEGSDGRFLISYDRTLVI 122 Query: 152 KEVSSEDIADMHSNLSNYHQYIVKCHGNTLLPQFLGMYRVSVDNEDSYMLVMRNMFSHRL 211 KEVSSEDIADMHSNLSNYHQYIVKCHGNTLLPQFLGMYRVSVDNEDSYMLVMRNMFSHRL Sbjct: 123 KEVSSEDIADMHSNLSNYHQYIVKCHGNTLLPQFLGMYRVSVDNEDSYMLVMRNMFSHRL 182 Query: 212 PVHRKYDLKGSLVSREASDKEKVKELPTLKDMDFLNKNQKVYIGEEEKKIFLEKLKRDVE 271 PVHRKYDLKGSLVSREASDKEKVKELPTL+DMDFLNKNQKVYIGEEEKKIFLEKLKRDVE Sbjct: 183 PVHRKYDLKGSLVSREASDKEKVKELPTLRDMDFLNKNQKVYIGEEEKKIFLEKLKRDVE 242 Query: 272 FLVQLKIMDYSLLLGIHDIIRGSEPEEEAPVREDESEVDGDCSLTGPPALVGSYGTSPEG 331 FLVQLKIMDYSLLLGIHDIIRGSEPEEEAPVREDESEVDGDCSLTGPPALVGSYGTSPEG Sbjct: 243 FLVQLKIMDYSLLLGIHDIIRGSEPEEEAPVREDESEVDGDCSLTGPPALVGSYGTSPEG 302 Query: 332 IGGYIHSHRPLGPGEFESFIDVYAIRSAEGAPQKEVYFMGLIDILTQYDAKKKAAHAAKT 391 IGGYIHSHRPLGPGEFESFIDVYAIRSAEGAPQKEVYFMGLIDILTQYDAKKKAAHAAKT Sbjct: 303 IGGYIHSHRPLGPGEFESFIDVYAIRSAEGAPQKEVYFMGLIDILTQYDAKKKAAHAAKT 362 Query: 392 VKHGAGAEISTVHPEQYAKRFLDFITNIFA 421 VKHGAGAEISTVHPEQYAKRFLDFITNIFA Sbjct: 363 VKHGAGAEISTVHPEQYAKRFLDFITNIFA 392 >3X07-A nrPDB Length = 393 Score = 494 bits (1272), Expect = e-140, Method: Compositional matrix adjust. Identities = 258/389 (66%), Positives = 314/389 (80%), Gaps = 6/389 (1%) Query: 36 QKVKVFRAADPLVGVFLWGVAHSINELSQVPPPVMLLPDDFKASSKIKVNNHLFHRENLP 95 QKVK+FRA++P++ V +WGV H+INELS VP PVML+PDDFKA SKIKV+NHLF++ENLP Sbjct: 8 QKVKLFRASEPILSVLMWGVNHTINELSNVPVPVMLMPDDFKAYSKIKVDNHLFNKENLP 67 Query: 96 SHFKFKEYCPQVFRNLRDRFGIDDQDYLVSLTRNPP--SESEGSDG-RFLISYDRTLVIK 152 S FKFKEYCP VFRNLR+RFGIDDQDY S+TR+ P S+S+G G RFL +YDR VIK Sbjct: 68 SRFKFKEYCPMVFRNLRERFGIDDQDYQNSVTRSAPINSDSQGRCGTRFLTTYDRRFVIK 127 Query: 153 EVSSEDIADMHSNLSNYHQYIVKCHGNTLLPQFLGMYRVSVDNEDSYMLVMRNMFSHRLP 212 VSSED+A+MH+ L YHQ+IV+CHGNTLLPQFLGMYR++VD ++YM+V R +FSHRL Sbjct: 128 TVSSEDVAEMHNILKKYHQFIVECHGNTLLPQFLGMYRLTVDGVETYMVVTRAVFSHRLT 187 Query: 213 VHRKYDLKGSLVSREASDKEKVKELPTLKDMDFLNKNQKVYIGEEEKKIFLEKLKRDVEF 272 VHRKYDLKGS V+REASDKEK K+LPT KD DFLN+ QK+++GEE KK FLEKLKRDVEF Sbjct: 188 VHRKYDLKGSTVAREASDKEKAKDLPTFKDNDFLNEGQKLHVGEESKKNFLEKLKRDVEF 247 Query: 273 LVQLKIMDYSLLLGIHDIIRGSEPEEEAPVREDESEVDGDCSLTGPPALVGSYGTSPEGI 332 L QLKIMDYSLL+GIHD+ R + E E R ++ E + D + G L+ SYGT P+ Sbjct: 248 LAQLKIMDYSLLVGIHDVDRAEQEEMEVEERAEDEECEND-GVGG--NLLCSYGTPPDSP 304 Query: 333 GGYIHSHRPLGPGEFESFIDVYAIRSAEGAPQKEVYFMGLIDILTQYDAKKKAAHAAKTV 392 G + R GPGEF+ +DVYA++S E +P+KEVYFM +IDILT YD KKKAAHAAKTV Sbjct: 305 GNLLSFPRFFGPGEFDPSVDVYAMKSHESSPKKEVYFMAIIDILTPYDTKKKAAHAAKTV 364 Query: 393 KHGAGAEISTVHPEQYAKRFLDFITNIFA 421 KHGAGAEISTV+PEQY+KRF +F++NI Sbjct: 365 KHGAGAEISTVNPEQYSKRFNEFMSNILT 393 >2YBX-A nrPDB Length = 394 Score = 461 bits (1186), Expect = e-130, Method: Compositional matrix adjust. Identities = 247/383 (64%), Positives = 301/383 (78%), Gaps = 11/383 (2%) Query: 41 FRAADPLVGVFLWGVAHSINELSQVPPPVMLLPDDFKASSKIKVNNHLFHRENLPSHFKF 100 F++ DPL+ V +WGV HSINELS V PVML+PDDFKA SKIKV+NHLF++EN+PSHFKF Sbjct: 20 FQSMDPLLSVLMWGVNHSINELSHVQIPVMLMPDDFKAYSKIKVDNHLFNKENMPSHFKF 79 Query: 101 KEYCPQVFRNLRDRFGIDDQDYLVSLTRNPP--SESEGSDG-RFLISYDRTLVIKEVSSE 157 KEYCP VFRNLR+RFGIDDQD+ SLTR+ P ++S+ G RF SYD+ +IK ++SE Sbjct: 80 KEYCPMVFRNLRERFGIDDQDFQNSLTRSAPLPNDSQARSGARFHTSYDKRYIIKTITSE 139 Query: 158 DIADMHSNLSNYHQYIVKCHGNTLLPQFLGMYRVSVDNEDSYMLVMRNMFSHRLPVHRKY 217 D+A+MH+ L YHQYIV+CHG TLLPQFLGMYR++VD + Y++V RN+FSHRL V+RKY Sbjct: 140 DVAEMHNILKKYHQYIVECHGITLLPQFLGMYRLNVDGVEIYVIVTRNVFSHRLSVYRKY 199 Query: 218 DLKGSLVSREASDKEKVKELPTLKDMDFLNKNQKVYIGEEEKKIFLEKLKRDVEFLVQLK 277 DLKGS V+REASDKEK KELPTLKD DF+N+ QK+YI + KK+FLEKLK+DVEFL QLK Sbjct: 200 DLKGSTVAREASDKEKAKELPTLKDNDFINEGQKIYIDDNNKKVFLEKLKKDVEFLAQLK 259 Query: 278 IMDYSLLLGIHDIIRGSEPEEEAPVREDESEVDGDCSLTGPPALVGSYGTSPEGIGGYIH 337 +MDYSLL+GIHD+ R + E E + E E + D T P GT P+ G ++ Sbjct: 260 LMDYSLLVGIHDVERAEQEEVECEENDGEEEGESDG--THP------VGTPPDSPGNTLN 311 Query: 338 SHRPLGPGEFESFIDVYAIRSAEGAPQKEVYFMGLIDILTQYDAKKKAAHAAKTVKHGAG 397 S PL PGEF+ IDVY I+ E +P+KEVYFM +IDILT YDAKKKAAHAAKTVKHGAG Sbjct: 312 SSPPLAPGEFDPNIDVYGIKCHENSPRKEVYFMAIIDILTHYDAKKKAAHAAKTVKHGAG 371 Query: 398 AEISTVHPEQYAKRFLDFITNIF 420 AEISTV+PEQY+KRFLDFI +I Sbjct: 372 AEISTVNPEQYSKRFLDFIGHIL 394 >6CMW-A nrPDB Length = 394 Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 129/384 (33%), Positives = 187/384 (48%), Gaps = 28/384 (7%) Query: 43 AADPLVGVFLWGVAHSINELSQVPPPVMLLPDDFKASSKIKVNNHLFHRENLPSH----F 98 + L G G+ HS+ LSQ P +L+ DF+ I + + P H F Sbjct: 13 TSSALKGAIQLGITHSVGSLSQKPERDVLM-QDFEVVESIFFPSQ--GSSSTPGHHHGDF 69 Query: 99 KFKEYCPQVFRNLRDRFGIDDQDYLVSLTRNPPSE--SEGSDGR-FLISYDRTLVIKEVS 155 KFK Y P FR R+ FGI DYL SL P E + G+ G F +S D +IK V Sbjct: 70 KFKTYAPIAFRYFREMFGIRPDDYLYSLCNEPLIELSNPGASGSLFYVSSDDEFIIKTVQ 129 Query: 156 SEDIADMHSNLSNYHQYIVKCHGNTLLPQFLGMYRVSVDNEDSYMLVMRNMFSHRLPVHR 215 ++ + + L Y + + + TLLP+F G+Y V D ++ ++VM N+ +P+H Sbjct: 130 HKEAEFLQTLLPGYFMNLNQ-NMRTLLPKFYGLYCVQADGKNIRIVVMNNLLPRAVPMHL 188 Query: 216 KYDLKGSLVSREASDKEKVKELPTLKDMDFLNKNQKVYIGEEEKKIFLEK-LKRDVEFLV 274 K+DLKGS R AS KE+ K +PT KD+DF+ + + E + L + ++RD L Sbjct: 189 KFDLKGSTYKRRASPKERSKGVPTYKDLDFMQDMPEGILLENDHYTALSRTMQRDCRVLQ 248 Query: 275 QLKIMDYSLLLGIHDIIRGSEPEEEAPVREDESEVDGDCSLTGPPALVGSYGTSPEGIGG 334 KIMDYSLL+GIH + R E E V + + + G L Y T+ E I G Sbjct: 249 SFKIMDYSLLVGIHILHRAGE-EASTAVPDTQKKGQGQKPL---------YCTAIESIQG 298 Query: 335 YIHSHRPLGPGEFESFIDVYAIRSAEGAPQKEVYFMGLIDILTQYDAKKKAAHAAKTVKH 394 S P +ES + A S ++ + F+G+IDIL Y KK H+ K + H Sbjct: 299 --ESKSKTSPQPYESMGGIPAFNSKG---ERLLVFIGIIDILQSYRLVKKLEHSWKALLH 353 Query: 395 GAGAEISTVHPEQYAKRFLDFITN 418 G +S P YA RF F+ + Sbjct: 354 D-GDTVSVHRPSFYADRFQKFMCS 376 >4HZI-A nrPDB Length = 294 Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust. Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 13/75 (17%) Query: 213 VHRKYDLKGSLVS---------REASDKEKVKELPTLKDMDFLNKNQKVY----IGEEEK 259 + RK +K ++++ R+ S +E+ K L LKD D L+K ++Y GE++K Sbjct: 122 IQRKLTVKDTILTGLFHTIGYYRDPSPEEETKTLQILKDSDLLSKKDQLYNTLSSGEKKK 181 Query: 260 KIFLEKLKRDVEFLV 274 +FL + + +FL+ Sbjct: 182 ILFLRSIVNEPDFLI 196 >1A47-A nrPDB Length = 683 Score = 32.0 bits (71), Expect = 0.51, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 3/54 (5%) Query: 68 PVMLLPDDFKASSKIKVNNHLFHRENLPS--HFKFKEYCPQVFRNLRDR-FGID 118 PV + F +++I VNN F E+ S F+F + QVFR+ D +G+D Sbjct: 252 PVFTFGEWFLGTNEIDVNNTYFANESGMSLLDFRFSQKVRQVFRDNTDTMYGLD 305 >1CYG-A nrPDB Length = 680 Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust. Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%) Query: 68 PVMLLPDDFKASSKIKVNNHLFHRENLPS--HFKFKEYCPQVFRNLRDRF 115 PV + F + +++ NNH F E+ S F+F + QV RN D + Sbjct: 247 PVFTFGEWFLSENEVDANNHYFANESGMSLLDFRFGQKLRQVLRNNSDNW 296 >3R31-A nrPDB Length = 517 Score = 28.9 bits (63), Expect = 4.0, Method: Compositional matrix adjust. Identities = 13/40 (32%), Positives = 23/40 (57%) Query: 247 NKNQKVYIGEEEKKIFLEKLKRDVEFLVQLKIMDYSLLLG 286 + +V++ ++ K FLE LKR E ++ +DY+ LG Sbjct: 293 SNGTRVFVQKKAKARFLENLKRRTEAMILGDPLDYATHLG 332 >5FWK-A nrPDB Length = 727 Score = 28.9 bits (63), Expect = 4.3, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 9/83 (10%) Query: 179 NTLLPQFLGMYRVSVDNEDSYMLVMRNMF--SHRLPVHRKYDLKGS--LVSREASDKEKV 234 + L+P++L R VD+ED + + R M S L V RK +K L S A DKE Sbjct: 370 DELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNIVKKCLELFSELAEDKENY 429 Query: 235 KELPTLKDMDFLNKNQKVYIGEE 257 K+ + +KN K+ I E+ Sbjct: 430 KKF-----YEAFSKNLKLGIHED 447 >5NBS-A nrPDB Length = 857 Score = 28.9 bits (63), Expect = 4.5, Method: Compositional matrix adjust. Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 5/76 (6%) Query: 191 VSVDNEDSYMLVMRNMFSHRLPVHRKYDLKGSLVSREASDKEKVKELPTLKDMDFLNKNQ 250 VS+ + +V+R R+ K K L R+ S + VK+ D + Sbjct: 785 VSLGGPEDPKVVLRGFDRLRVEPGEKVQFKAVLTRRDVSSWDTVKQ-----DWVITEYAK 839 Query: 251 KVYIGEEEKKIFLEKL 266 KVY+G +K+ LE++ Sbjct: 840 KVYVGPSSRKLDLEEV 855 >3CYM-A nrPDB Length = 440 Score = 28.5 bits (62), Expect = 6.2, Method: Compositional matrix adjust. Identities = 17/86 (19%), Positives = 42/86 (48%), Gaps = 4/86 (4%) Query: 181 LLPQFLGMYRVSVDNEDSYMLVMRNMFSHRLPVHRKYDLKGSLVSREASDKEKVKELP-- 238 L+P + V + + ++R +++ R + R+YD+ +L+ ++S E K P Sbjct: 215 LIPWMHVSHITEVMRDRQALAIVRALWTRRDELAREYDIAPTLLLSDSSIIEVAKRKPHN 274 Query: 239 --TLKDMDFLNKNQKVYIGEEEKKIF 262 + + +N+ +++ E+ K+F Sbjct: 275 AAQFRSIRSINERVRIHTDSEQDKMF 300 >6FEC-u nrPDB Length = 636 Score = 28.1 bits (61), Expect = 6.9, Method: Compositional matrix adjust. Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 4/41 (9%) Query: 294 SEPEEEAPVREDESEVDGDCSLTGPPALVGSYGTSPEGIGG 334 ++P EE P R+DE++VDG + P G+ P G GG Sbjct: 540 AQPSEEGPGRKDENKVDG---MNAPKGQTGNSSRGP-GDGG 576 >3PRY-A nrPDB Length = 268 Score = 28.1 bits (61), Expect = 8.4, Method: Compositional matrix adjust. Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 9/83 (10%) Query: 179 NTLLPQFLGMYRVSVDNEDSYMLVMRNMF--SHRLPVHRKYDLKGS--LVSREASDKEKV 234 + L+P++L R VD+ED + + R M S L V RK +K L S A DKE Sbjct: 85 DELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNIVKKCLELFSELAEDKENY 144 Query: 235 KELPTLKDMDFLNKNQKVYIGEE 257 K K + +KN K+ I E+ Sbjct: 145 K-----KFYEAFSKNLKLGIHED 162 >1UHG-A nrPDB Length = 385 Score = 27.7 bits (60), Expect = 9.1, Method: Compositional matrix adjust. Identities = 16/54 (29%), Positives = 26/54 (48%) Query: 185 FLGMYRVSVDNEDSYMLVMRNMFSHRLPVHRKYDLKGSLVSREASDKEKVKELP 238 F G++ + +ED+ + R PV Y + V+ AS+K K+ ELP Sbjct: 180 FKGLWEKAFKDEDTQAMPFRVTEQESKPVQMMYQIGLFRVASMASEKMKILELP 233 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 2GK9-A nrPDB 661 0.0 3X07-A nrPDB 572 e-163 2YBX-A nrPDB 543 e-155 6CMW-A nrPDB 476 e-134 Sequences not found previously or not previously below threshold: 1OHW-A nrPDB 34 0.17 4HZI-A nrPDB 33 0.32 3R31-A nrPDB 30 1.5 6CDD-A nrPDB 29 5.9 6CHS-A nrPDB 28 6.9 2XHE-A nrPDB 28 6.9 4HGN-A nrPDB 28 7.0 1M1J-A nrPDB 28 8.1 2EKC-A nrPDB 28 8.8 CONVERGED! >2GK9-A nrPDB Length = 392 Score = 661 bits (1706), Expect = 0.0, Method: Composition-based stats. Identities = 389/390 (99%), Positives = 390/390 (100%) Query: 32 HFVQQKVKVFRAADPLVGVFLWGVAHSINELSQVPPPVMLLPDDFKASSKIKVNNHLFHR 91 HFVQQKVKVFRAADPLVGVFLWGVAHSINELSQVPPPVMLLPDDFKASSKIKVNNHLFHR Sbjct: 3 HFVQQKVKVFRAADPLVGVFLWGVAHSINELSQVPPPVMLLPDDFKASSKIKVNNHLFHR 62 Query: 92 ENLPSHFKFKEYCPQVFRNLRDRFGIDDQDYLVSLTRNPPSESEGSDGRFLISYDRTLVI 151 ENLPSHFKFKEYCPQVFRNLRDRFGIDDQDYLVSLTRNPPSESEGSDGRFLISYDRTLVI Sbjct: 63 ENLPSHFKFKEYCPQVFRNLRDRFGIDDQDYLVSLTRNPPSESEGSDGRFLISYDRTLVI 122 Query: 152 KEVSSEDIADMHSNLSNYHQYIVKCHGNTLLPQFLGMYRVSVDNEDSYMLVMRNMFSHRL 211 KEVSSEDIADMHSNLSNYHQYIVKCHGNTLLPQFLGMYRVSVDNEDSYMLVMRNMFSHRL Sbjct: 123 KEVSSEDIADMHSNLSNYHQYIVKCHGNTLLPQFLGMYRVSVDNEDSYMLVMRNMFSHRL 182 Query: 212 PVHRKYDLKGSLVSREASDKEKVKELPTLKDMDFLNKNQKVYIGEEEKKIFLEKLKRDVE 271 PVHRKYDLKGSLVSREASDKEKVKELPTL+DMDFLNKNQKVYIGEEEKKIFLEKLKRDVE Sbjct: 183 PVHRKYDLKGSLVSREASDKEKVKELPTLRDMDFLNKNQKVYIGEEEKKIFLEKLKRDVE 242 Query: 272 FLVQLKIMDYSLLLGIHDIIRGSEPEEEAPVREDESEVDGDCSLTGPPALVGSYGTSPEG 331 FLVQLKIMDYSLLLGIHDIIRGSEPEEEAPVREDESEVDGDCSLTGPPALVGSYGTSPEG Sbjct: 243 FLVQLKIMDYSLLLGIHDIIRGSEPEEEAPVREDESEVDGDCSLTGPPALVGSYGTSPEG 302 Query: 332 IGGYIHSHRPLGPGEFESFIDVYAIRSAEGAPQKEVYFMGLIDILTQYDAKKKAAHAAKT 391 IGGYIHSHRPLGPGEFESFIDVYAIRSAEGAPQKEVYFMGLIDILTQYDAKKKAAHAAKT Sbjct: 303 IGGYIHSHRPLGPGEFESFIDVYAIRSAEGAPQKEVYFMGLIDILTQYDAKKKAAHAAKT 362 Query: 392 VKHGAGAEISTVHPEQYAKRFLDFITNIFA 421 VKHGAGAEISTVHPEQYAKRFLDFITNIFA Sbjct: 363 VKHGAGAEISTVHPEQYAKRFLDFITNIFA 392 >3X07-A nrPDB Length = 393 Score = 572 bits (1473), Expect = e-163, Method: Composition-based stats. Identities = 257/389 (66%), Positives = 312/389 (80%), Gaps = 6/389 (1%) Query: 36 QKVKVFRAADPLVGVFLWGVAHSINELSQVPPPVMLLPDDFKASSKIKVNNHLFHRENLP 95 QKVK+FRA++P++ V +WGV H+INELS VP PVML+PDDFKA SKIKV+NHLF++ENLP Sbjct: 8 QKVKLFRASEPILSVLMWGVNHTINELSNVPVPVMLMPDDFKAYSKIKVDNHLFNKENLP 67 Query: 96 SHFKFKEYCPQVFRNLRDRFGIDDQDYLVSLTRNPP--SESEGSDG-RFLISYDRTLVIK 152 S FKFKEYCP VFRNLR+RFGIDDQDY S+TR+ P S+S+G G RFL +YDR VIK Sbjct: 68 SRFKFKEYCPMVFRNLRERFGIDDQDYQNSVTRSAPINSDSQGRCGTRFLTTYDRRFVIK 127 Query: 153 EVSSEDIADMHSNLSNYHQYIVKCHGNTLLPQFLGMYRVSVDNEDSYMLVMRNMFSHRLP 212 VSSED+A+MH+ L YHQ+IV+CHGNTLLPQFLGMYR++VD ++YM+V R +FSHRL Sbjct: 128 TVSSEDVAEMHNILKKYHQFIVECHGNTLLPQFLGMYRLTVDGVETYMVVTRAVFSHRLT 187 Query: 213 VHRKYDLKGSLVSREASDKEKVKELPTLKDMDFLNKNQKVYIGEEEKKIFLEKLKRDVEF 272 VHRKYDLKGS V+REASDKEK K+LPT KD DFLN+ QK+++GEE KK FLEKLKRDVEF Sbjct: 188 VHRKYDLKGSTVAREASDKEKAKDLPTFKDNDFLNEGQKLHVGEESKKNFLEKLKRDVEF 247 Query: 273 LVQLKIMDYSLLLGIHDIIRGSEPEEEAPVREDESEVDGDCSLTGPPALVGSYGTSPEGI 332 L QLKIMDYSLL+GIHD+ R + E E R ++ E + D L+ SYGT P+ Sbjct: 248 LAQLKIMDYSLLVGIHDVDRAEQEEMEVEERAEDEECENDGVGG---NLLCSYGTPPDSP 304 Query: 333 GGYIHSHRPLGPGEFESFIDVYAIRSAEGAPQKEVYFMGLIDILTQYDAKKKAAHAAKTV 392 G + R GPGEF+ +DVYA++S E +P+KEVYFM +IDILT YD KKKAAHAAKTV Sbjct: 305 GNLLSFPRFFGPGEFDPSVDVYAMKSHESSPKKEVYFMAIIDILTPYDTKKKAAHAAKTV 364 Query: 393 KHGAGAEISTVHPEQYAKRFLDFITNIFA 421 KHGAGAEISTV+PEQY+KRF +F++NI Sbjct: 365 KHGAGAEISTVNPEQYSKRFNEFMSNILT 393 >2YBX-A nrPDB Length = 394 Score = 543 bits (1398), Expect = e-155, Method: Composition-based stats. Identities = 247/383 (64%), Positives = 301/383 (78%), Gaps = 11/383 (2%) Query: 41 FRAADPLVGVFLWGVAHSINELSQVPPPVMLLPDDFKASSKIKVNNHLFHRENLPSHFKF 100 F++ DPL+ V +WGV HSINELS V PVML+PDDFKA SKIKV+NHLF++EN+PSHFKF Sbjct: 20 FQSMDPLLSVLMWGVNHSINELSHVQIPVMLMPDDFKAYSKIKVDNHLFNKENMPSHFKF 79 Query: 101 KEYCPQVFRNLRDRFGIDDQDYLVSLTRNPP--SESEGSDG-RFLISYDRTLVIKEVSSE 157 KEYCP VFRNLR+RFGIDDQD+ SLTR+ P ++S+ G RF SYD+ +IK ++SE Sbjct: 80 KEYCPMVFRNLRERFGIDDQDFQNSLTRSAPLPNDSQARSGARFHTSYDKRYIIKTITSE 139 Query: 158 DIADMHSNLSNYHQYIVKCHGNTLLPQFLGMYRVSVDNEDSYMLVMRNMFSHRLPVHRKY 217 D+A+MH+ L YHQYIV+CHG TLLPQFLGMYR++VD + Y++V RN+FSHRL V+RKY Sbjct: 140 DVAEMHNILKKYHQYIVECHGITLLPQFLGMYRLNVDGVEIYVIVTRNVFSHRLSVYRKY 199 Query: 218 DLKGSLVSREASDKEKVKELPTLKDMDFLNKNQKVYIGEEEKKIFLEKLKRDVEFLVQLK 277 DLKGS V+REASDKEK KELPTLKD DF+N+ QK+YI + KK+FLEKLK+DVEFL QLK Sbjct: 200 DLKGSTVAREASDKEKAKELPTLKDNDFINEGQKIYIDDNNKKVFLEKLKKDVEFLAQLK 259 Query: 278 IMDYSLLLGIHDIIRGSEPEEEAPVREDESEVDGDCSLTGPPALVGSYGTSPEGIGGYIH 337 +MDYSLL+GIHD+ R + E E + E E + D T P GT P+ G ++ Sbjct: 260 LMDYSLLVGIHDVERAEQEEVECEENDGEEEGESDG--THP------VGTPPDSPGNTLN 311 Query: 338 SHRPLGPGEFESFIDVYAIRSAEGAPQKEVYFMGLIDILTQYDAKKKAAHAAKTVKHGAG 397 S PL PGEF+ IDVY I+ E +P+KEVYFM +IDILT YDAKKKAAHAAKTVKHGAG Sbjct: 312 SSPPLAPGEFDPNIDVYGIKCHENSPRKEVYFMAIIDILTHYDAKKKAAHAAKTVKHGAG 371 Query: 398 AEISTVHPEQYAKRFLDFITNIF 420 AEISTV+PEQY+KRFLDFI +I Sbjct: 372 AEISTVNPEQYSKRFLDFIGHIL 394 >6CMW-A nrPDB Length = 394 Score = 476 bits (1224), Expect = e-134, Method: Composition-based stats. Identities = 129/384 (33%), Positives = 187/384 (48%), Gaps = 28/384 (7%) Query: 43 AADPLVGVFLWGVAHSINELSQVPPPVMLLPDDFKASSKIKVNNHLFHRENLPSH----F 98 + L G G+ HS+ LSQ P +L+ DF+ I + + P H F Sbjct: 13 TSSALKGAIQLGITHSVGSLSQKPERDVLM-QDFEVVESIFFPSQ--GSSSTPGHHHGDF 69 Query: 99 KFKEYCPQVFRNLRDRFGIDDQDYLVSLTRNPPSE--SEGSDGR-FLISYDRTLVIKEVS 155 KFK Y P FR R+ FGI DYL SL P E + G+ G F +S D +IK V Sbjct: 70 KFKTYAPIAFRYFREMFGIRPDDYLYSLCNEPLIELSNPGASGSLFYVSSDDEFIIKTVQ 129 Query: 156 SEDIADMHSNLSNYHQYIVKCHGNTLLPQFLGMYRVSVDNEDSYMLVMRNMFSHRLPVHR 215 ++ + + L Y + + + TLLP+F G+Y V D ++ ++VM N+ +P+H Sbjct: 130 HKEAEFLQTLLPGYFMNLNQ-NMRTLLPKFYGLYCVQADGKNIRIVVMNNLLPRAVPMHL 188 Query: 216 KYDLKGSLVSREASDKEKVKELPTLKDMDFLNKNQKVYIGEEEKKIFLEK-LKRDVEFLV 274 K+DLKGS R AS KE+ K +PT KD+DF+ + + E + L + ++RD L Sbjct: 189 KFDLKGSTYKRRASPKERSKGVPTYKDLDFMQDMPEGILLENDHYTALSRTMQRDCRVLQ 248 Query: 275 QLKIMDYSLLLGIHDIIRGSEPEEEAPVREDESEVDGDCSLTGPPALVGSYGTSPEGIGG 334 KIMDYSLL+GIH + R E E V + + + G L Y T+ E I G Sbjct: 249 SFKIMDYSLLVGIHILHRAGE-EASTAVPDTQKKGQGQKPL---------YCTAIESIQG 298 Query: 335 YIHSHRPLGPGEFESFIDVYAIRSAEGAPQKEVYFMGLIDILTQYDAKKKAAHAAKTVKH 394 S P +ES + A S ++ + F+G+IDIL Y KK H+ K + H Sbjct: 299 --ESKSKTSPQPYESMGGIPAFNSKG---ERLLVFIGIIDILQSYRLVKKLEHSWKALLH 353 Query: 395 GAGAEISTVHPEQYAKRFLDFITN 418 G +S P YA RF F+ + Sbjct: 354 D-GDTVSVHRPSFYADRFQKFMCS 376 >1OHW-A nrPDB Length = 472 Score = 33.5 bits (75), Expect = 0.17, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 38/110 (34%), Gaps = 9/110 (8%) Query: 307 SEVDGDCSLTGPPALVGSYGTSPEGIGGYIHSHRPLGPG------EFESFIDVYAIRSAE 360 EV TG +G + + + + G EF + Sbjct: 298 DEVQTGGGSTGKFWAHEHWG--LDDPADVMTFSKKMMTGGFFHKEEFRPNAPYRIFNTWL 355 Query: 361 GAPQKEVYFMGLIDILTQYDAKKKAAHAAKTVKHGAGAEISTVHPEQYAK 410 G P K + +I+I+ + D AAHA K + G + +P+ ++ Sbjct: 356 GDPSKNLLLAEVINIIKREDLLSNAAHAGKVLLTGLLD-LQARYPQFISR 404 >4HZI-A nrPDB Length = 294 Score = 32.7 bits (73), Expect = 0.32, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 8/61 (13%) Query: 224 VSREASDKEKVKELPTLKDMDFLNKNQKVY----IGEEEKKIFLEKLKRDVEFLVQLKIM 279 R+ S +E+ K L LKD D L+K ++Y GE++K +FL + + +FL IM Sbjct: 142 YYRDPSPEEETKTLQILKDSDLLSKKDQLYNTLSSGEKKKILFLRSIVNEPDFL----IM 197 Query: 280 D 280 D Sbjct: 198 D 198 >3R31-A nrPDB Length = 517 Score = 30.4 bits (67), Expect = 1.5, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 38/80 (47%), Gaps = 1/80 (1%) Query: 247 NKNQKVYIGEEEKKIFLEKLKRDVEFLVQLKIMDYSLLLGIHDIIRGSEPEEEAPVREDE 306 + +V++ ++ K FLE LKR E ++ +DY+ LG + + + + + + + + Sbjct: 293 SNGTRVFVQKKAKARFLENLKRRTEAMILGDPLDYATHLG-PLVSKAQQEKVLSYIEKGK 351 Query: 307 SEVDGDCSLTGPPALVGSYG 326 +E + G P V G Sbjct: 352 AEGATLITGGGIPNNVAGEG 371 >6CDD-A nrPDB Length = 474 Score = 28.5 bits (62), Expect = 5.9, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%) Query: 238 PTLKDMDFLNKNQKVYIGEEEKKIFLEKLKRDVEFLVQLKIMDYSLLLGIHDIIRGSEPE 297 P D F +N++ Y+GE ++ + K + E + + D+ LL IH + S+ E Sbjct: 375 PLFTDNIFPIENRE-YVGEAQEVSAVAKALKVHEADAPMNVSDFHLLCFIHQMSVLSKEE 433 Query: 298 E 298 E Sbjct: 434 E 434 >6CHS-A nrPDB Length = 659 Score = 28.1 bits (61), Expect = 6.9, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%) Query: 238 PTLKDMDFLNKNQKVYIGEEEKKIFLEKLKRDVEFLVQLKIMDYSLLLGIHDIIRGSEPE 297 P D F +N++ Y+GE ++ + K + E + + D+ LL IH + S+ E Sbjct: 503 PLFTDNIFPIENRE-YVGEAQEVSAVAKALKVHEADAPMNVSDFHLLCFIHQMSVLSKEE 561 Query: 298 E 298 E Sbjct: 562 E 562 >2XHE-A nrPDB Length = 650 Score = 28.1 bits (61), Expect = 6.9, Method: Composition-based stats. Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 11/89 (12%) Query: 179 NTLLPQFLGMYRVSVDNEDSYMLVMRNMFSHRLPVHRKYDL------KGSLVSREASDKE 232 +LPQF G+Y + E+ ++ F+ R P + L +L+++ AS K Sbjct: 62 RKVLPQFHGVYFIEPTEENLDYVIRD--FADRTPTYEAAHLFFLSPVPDALMAKLASAKA 119 Query: 233 KVKELPTLKDMD--FLNKNQKVYIGEEEK 259 VK + TLK+++ F+ K +V+ E Sbjct: 120 -VKYVKTLKEINTLFIPKEHRVFTLNEPH 147 >4HGN-A nrPDB Length = 176 Score = 28.1 bits (61), Expect = 7.0, Method: Composition-based stats. Identities = 10/32 (31%), Positives = 15/32 (46%) Query: 108 FRNLRDRFGIDDQDYLVSLTRNPPSESEGSDG 139 +RN RD++G+ D + L P E G Sbjct: 94 YRNFRDKYGLSDDEILYMGDDVPDIEVMRECG 125 >1M1J-A nrPDB Length = 491 Score = 28.1 bits (61), Expect = 8.1, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 28/81 (34%), Gaps = 4/81 (4%) Query: 72 LPDDFKASSKIKVNNHLFHRENLPSHFKFKEYCPQ----VFRNLRDRFGIDDQDYLVSLT 127 + DF+ ++ + N+P HFK K F N++ + ++ + Sbjct: 194 MHPDFQTTTLSTLKMRPLKDSNVPEHFKLKPSPEMQAMSAFNNIKQMQVVLERPETDHVA 253 Query: 128 RNPPSESEGSDGRFLISYDRT 148 S G+ + S R Sbjct: 254 EARGDSSPSHTGKLITSSHRR 274 >2EKC-A nrPDB Length = 262 Score = 27.7 bits (60), Expect = 8.8, Method: Composition-based stats. Identities = 15/106 (14%), Positives = 39/106 (36%), Gaps = 10/106 (9%) Query: 147 RTLVIKEVSSEDIADMHSNLSNYHQYIVKCHGNTLLPQFLGMYRVSVDNEDSYMLVM--- 203 ++ ++ E+ ++ + + Y V T + + + + D ++ V Sbjct: 124 DGFIVPDLPPEEAEELKAVMKKYVLSFVPLGAPTSTRKRIKLICEAADEMTYFVSVTGTT 183 Query: 204 --RNMFSH-----RLPVHRKYDLKGSLVSREASDKEKVKELPTLKD 242 R + ++ +R+ K +V S KE +E+ + D Sbjct: 184 GAREKLPYERIKKKVEEYRELCDKPVVVGFGVSKKEHAREIGSFAD 229 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.314 0.133 0.354 Lambda K H 0.267 0.0404 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 16,250,546 Number of Sequences: 36641 Number of extensions: 674001 Number of successful extensions: 1840 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 31 Number of HSP's that attempted gapping in prelim test: 1802 Number of HSP's gapped (non-prelim): 48 length of query: 421 length of database: 10,336,785 effective HSP length: 100 effective length of query: 321 effective length of database: 6,672,685 effective search space: 2141931885 effective search space used: 2141931885 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 60 (27.7 bits)