BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q8TBC4 (463 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 1YOV-B nrPDB 922 0.0 2NVU-B nrPDB 905 0.0 1Y8X-B nrPDB 191 4e-49 3KYC-B nrPDB 168 5e-42 3KYD-B nrPDB 167 1e-41 1ZFN-A nrPDB 65 5e-11 1JWB-B nrPDB 59 5e-09 6CWZ-C nrPDB 57 1e-08 3VH2-A nrPDB 57 2e-08 3T7E-A nrPDB 57 2e-08 3H5A-A nrPDB 56 3e-08 5FF5-A nrPDB 55 5e-08 4RDI-A nrPDB 54 1e-07 4P22-A nrPDB 53 4e-07 1TT5-A nrPDB 50 3e-06 5IAA-A nrPDB 35 0.059 2PX9-A nrPDB 33 0.18 3PVZ-A nrPDB 31 1.1 2Q1T-A nrPDB 31 1.2 1UKV-G nrPDB 30 2.1 5C53-B nrPDB 30 2.5 3IKL-A nrPDB 30 2.7 3KYB-A nrPDB 30 3.3 1SC7-A nrPDB 29 4.1 3DKB-A nrPDB 28 7.0 5C52-B nrPDB 28 8.6 1PJ5-A nrPDB 28 8.7 5D1C-A nrPDB 28 9.4 >1YOV-B nrPDB Length = 444 Score = 922 bits (2382), Expect = 0.0, Method: Compositional matrix adjust. Identities = 442/443 (99%), Positives = 442/443 (99%) Query: 21 KMAVDGGCGDTGDWEGRWNHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGL 80 MAVDGGCGDTGDWEGRWNHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGL Sbjct: 2 SMAVDGGCGDTGDWEGRWNHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGL 61 Query: 81 GCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCN 140 GCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCN Sbjct: 62 GCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCN 121 Query: 141 VVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLID 200 VVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLID Sbjct: 122 VVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLID 181 Query: 201 GGTEGFKGNARVILPGMTACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRMLQWPK 260 GGTEGFKGNARVILPGMTACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRMLQWPK Sbjct: 182 GGTEGFKGNARVILPGMTACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRMLQWPK 241 Query: 261 EQPFGEGVPLDGDDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVI 320 EQPFGEGVPLDGDDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVI Sbjct: 242 EQPFGEGVPLDGDDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVI 301 Query: 321 AAVCATEVFKIATSAYIPLNNYLVFNDVDGLYTYTFEAERKENCPACSQLPQNIQFSPSA 380 AAVCATEVFKIATSAYIPLNNYLVFNDVDGLYTYTFEAERKENCPACSQLPQNIQFSPSA Sbjct: 302 AAVCATEVFKIATSAYIPLNNYLVFNDVDGLYTYTFEAERKENCPACSQLPQNIQFSPSA 361 Query: 381 KLQEVLDYLTNSASLQMKSPAITATLEGKNRTLYLQSVTSIEERTRPNLSKTLKELGLVD 440 KLQEVLDYLTNSASLQMKSPAITATLEGKNRTLYLQSVTSIEERTRPNLSKTLKELGLVD Sbjct: 362 KLQEVLDYLTNSASLQMKSPAITATLEGKNRTLYLQSVTSIEERTRPNLSKTLKELGLVD 421 Query: 441 GQELAVADVTTPQTVLFKLHFTS 463 GQELAVADVTTPQTVLFKLHFTS Sbjct: 422 GQELAVADVTTPQTVLFKLHFTS 444 >2NVU-B nrPDB Length = 805 Score = 905 bits (2338), Expect = 0.0, Method: Compositional matrix adjust. Identities = 431/433 (99%), Positives = 431/433 (99%) Query: 31 TGDWEGRWNHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLAL 90 DWEGRWNHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLAL Sbjct: 373 AADWEGRWNHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLAL 432 Query: 91 SGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKIQD 150 SGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKIQD Sbjct: 433 SGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKIQD 492 Query: 151 FNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFKGNA 210 FNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFKGNA Sbjct: 493 FNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFKGNA 552 Query: 211 RVILPGMTACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRMLQWPKEQPFGEGVPL 270 RVILPGMTACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRMLQWPKEQPFGEGVPL Sbjct: 553 RVILPGMTACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRMLQWPKEQPFGEGVPL 612 Query: 271 DGDDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFK 330 DGDDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFK Sbjct: 613 DGDDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFK 672 Query: 331 IATSAYIPLNNYLVFNDVDGLYTYTFEAERKENCPACSQLPQNIQFSPSAKLQEVLDYLT 390 IATSAYIPLNNYLVFNDVDGLYTYTFEAERKENCPACSQLPQNIQFSPSAKLQEVLDYLT Sbjct: 673 IATSAYIPLNNYLVFNDVDGLYTYTFEAERKENCPACSQLPQNIQFSPSAKLQEVLDYLT 732 Query: 391 NSASLQMKSPAITATLEGKNRTLYLQSVTSIEERTRPNLSKTLKELGLVDGQELAVADVT 450 NSASLQMKSPAITATLEGKNRTLYLQSVTSIEERTRPNLSKTLKELGLVDGQELAVADVT Sbjct: 733 NSASLQMKSPAITATLEGKNRTLYLQSVTSIEERTRPNLSKTLKELGLVDGQELAVADVT 792 Query: 451 TPQTVLFKLHFTS 463 TPQTVLFKLHFTS Sbjct: 793 TPQTVLFKLHFTS 805 >1Y8X-B nrPDB Length = 98 Score = 191 bits (486), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 95/97 (97%), Positives = 96/97 (98%) Query: 367 CSQLPQNIQFSPSAKLQEVLDYLTNSASLQMKSPAITATLEGKNRTLYLQSVTSIEERTR 426 SQLPQNIQFSPSAKLQEVLDYLTNSASLQMKSPAITATLEGKNRTLY+QSVTSIEERTR Sbjct: 2 SSQLPQNIQFSPSAKLQEVLDYLTNSASLQMKSPAITATLEGKNRTLYMQSVTSIEERTR 61 Query: 427 PNLSKTLKELGLVDGQELAVADVTTPQTVLFKLHFTS 463 PNLSKTLKELGLVDGQELAVADVTTPQTVLFKLHFTS Sbjct: 62 PNLSKTLKELGLVDGQELAVADVTTPQTVLFKLHFTS 98 >3KYC-B nrPDB Length = 660 Score = 168 bits (425), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 99/236 (41%), Positives = 135/236 (57%), Gaps = 19/236 (8%) Query: 71 KVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAE 130 +VLV+GAGG+GCELLKNL L+GF I +ID+DTIDVSNLNRQFLF+ K +GR KA+VA E Sbjct: 39 RVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKE 98 Query: 131 FLNDRVPNCNVVPHFNKIQ--DFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDG 188 + P N+V + + I D+N F+RQF +++ LD+ AR +N M + Sbjct: 99 SVLQFYPKANIVAYHDSIMNPDYNVEFFRQFILVMNALDNRAARNHVNRMCL-------- 150 Query: 189 VLDPSSIVPLIDGGTEGFKGNARVILPGMTACIECTLELYPPQVNFPMCTIASMPRLPEH 248 ++ VPLI+ GT G+ G I G+T C EC + P Q FP CTI + P P H Sbjct: 151 ----AADVPLIESGTAGYLGQVTTIKKGVTECYECHPK--PTQRTFPGCTIRNTPSEPIH 204 Query: 249 CIEYVRML--QWPKEQPFGEGVPLDGDDPEHIQWIFQKSLERASQYNIRGVTYRLT 302 CI + + L Q E+ + V D DPE W ++ RA N G R++ Sbjct: 205 CIVWAKYLFNQLFGEEDADQEVSPDRADPE-AAWEPTEAEARARACNEDGDIKRIS 259 Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 56/231 (24%), Positives = 89/231 (38%), Gaps = 23/231 (9%) Query: 239 IASMPRLPEHCIEYVRMLQWPKEQPFGEGVPL--DGDDPEHIQWIFQKSLERASQYNIRG 296 + S RL IE +R+ K G+G L D DDP + ++ + R +++ Sbjct: 335 VKSYARLFSKSIETLRVHLAEK----GDGAELIWDKDDPSAMDFVTSAANLRMHIFSMNM 390 Query: 297 VTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNNYLVF---NDVDGLYT 353 + + + IIPA+A+TNAVIA + E KI + + N L Sbjct: 391 KSRFDIKSMAGNIIPAIATTNAVIAGLIVLEGLKILSGKIDQCRTIFLNKQPNPRKKLLV 450 Query: 354 YTFEAERKENCPACSQLPQ-----NIQFSPSAKLQEVLDYLTNSASLQMKSPAITATLEG 408 NC C+ P+ N+ LQ+ + M +P + +G Sbjct: 451 PCALDPPNPNCYVCASKPEVTVRLNVHKVTVLTLQDKI----VKEKFAMVAPDVQIE-DG 505 Query: 409 KNRTLYLQSVTSIEERTRPNLSKTLKELGLVDGQELAVADVTTPQTVLFKL 459 K L ++S E T N K L E G+ +G L D T+L + Sbjct: 506 KGTIL----ISSEEGETEANNHKKLSEFGIRNGSRLQADDFLQDYTLLINI 552 >3KYD-B nrPDB Length = 551 Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 99/236 (41%), Positives = 135/236 (57%), Gaps = 19/236 (8%) Query: 71 KVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAE 130 +VLV+GAGG+GCELLKNL L+GF I +ID+DTIDVSNLNRQFLF+ K +GR KA+VA E Sbjct: 21 RVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKE 80 Query: 131 FLNDRVPNCNVVPHFNKIQ--DFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDG 188 + P N+V + + I D+N F+RQF +++ LD+ AR +N M + Sbjct: 81 SVLQFYPKANIVAYHDSIMNPDYNVEFFRQFILVMNALDNRAARNHVNRMCL-------- 132 Query: 189 VLDPSSIVPLIDGGTEGFKGNARVILPGMTACIECTLELYPPQVNFPMCTIASMPRLPEH 248 ++ VPLI+ GT G+ G I G+T C EC + P Q FP CTI + P P H Sbjct: 133 ----AADVPLIESGTAGYLGQVTTIKKGVTECYECHPK--PTQRTFPGCTIRNTPSEPIH 186 Query: 249 CIEYVRML--QWPKEQPFGEGVPLDGDDPEHIQWIFQKSLERASQYNIRGVTYRLT 302 CI + + L Q E+ + V D DPE W ++ RA N G R++ Sbjct: 187 CIVWAKYLFNQLFGEEDADQEVSPDRADPE-AAWEPTEAEARARACNEDGDIKRIS 241 Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 56/231 (24%), Positives = 89/231 (38%), Gaps = 23/231 (9%) Query: 239 IASMPRLPEHCIEYVRMLQWPKEQPFGEGVPL--DGDDPEHIQWIFQKSLERASQYNIRG 296 + S RL IE +R+ K G+G L D DDP + ++ + R +++ Sbjct: 317 VKSYARLFSKSIETLRVHLAEK----GDGAELIWDKDDPSAMDFVTSAANLRMHIFSMNM 372 Query: 297 VTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNNYLVF---NDVDGLYT 353 + + + IIPA+A+TNAVIA + E KI + + N L Sbjct: 373 KSRFDIKSMAGNIIPAIATTNAVIAGLIVLEGLKILSGKIDQCRTIFLNKQPNPRKKLLV 432 Query: 354 YTFEAERKENCPACSQLPQ-----NIQFSPSAKLQEVLDYLTNSASLQMKSPAITATLEG 408 NC C+ P+ N+ LQ+ + M +P + +G Sbjct: 433 PCALDPPNPNCYVCASKPEVTVRLNVHKVTVLTLQDKI----VKEKFAMVAPDVQIE-DG 487 Query: 409 KNRTLYLQSVTSIEERTRPNLSKTLKELGLVDGQELAVADVTTPQTVLFKL 459 K L ++S E T N K L E G+ +G L D T+L + Sbjct: 488 KGTIL----ISSEEGETEANNHKKLSEFGIRNGSRLQADDFLQDYTLLINI 534 >1ZFN-A nrPDB Length = 253 Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 52/169 (30%), Positives = 79/169 (46%), Gaps = 20/169 (11%) Query: 64 QFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRP 123 Q LLD+ +VL+IG GGLG LA +G + + D D + +SNL RQ LF +DI RP Sbjct: 26 QKLLDS-QVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRP 84 Query: 124 KAEVAAEFLNDRVPNCNVVPHFNKI--QDFNDTFYRQFHIIVCGLDSIIARRWINGMLIS 181 K++V+ + L P+ + ++ + D R ++ C D++ R+ IN ++ Sbjct: 85 KSQVSQQRLTQLNPDIQLTALQQRLTGEALKDAVARADVVLDC-TDNMATRQEINAACVA 143 Query: 182 LLNYEDGVLDPSSIVPLIDGGTEGFKGNARVILPGM-TACIECTLELYP 229 L PLI GF G V+ P C C L+P Sbjct: 144 L------------NTPLITASAVGFGGQLMVLTPPWEQGCYRC---LWP 177 >1JWB-B nrPDB Length = 249 Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 30/80 (37%), Positives = 45/80 (56%) Query: 64 QFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRP 123 Q L +VL++G GGLGC + LA +G + ++D DT+ +SNL RQ L +G+P Sbjct: 26 QEALKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQP 85 Query: 124 KAEVAAEFLNDRVPNCNVVP 143 K E A + L P+ + P Sbjct: 86 KVESARDALTRINPHIAITP 105 >6CWZ-C nrPDB Length = 346 Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 3/110 (2%) Query: 64 QFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRP 123 Q L +VL++G GLG E+ KNL L+G + + ++D + + + QFL R +GR Sbjct: 31 QKRLRASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRN 90 Query: 124 KAEVAAEFLNDRVPNCNVVPHFNKIQDFNDTFYRQFHII---VCGLDSII 170 +AE + E + P +V I+ ++F+ QF + C D I+ Sbjct: 91 RAEASLERAQNLNPMVDVKVDTEDIEKKPESFFTQFDAVCLTCCSRDVIV 140 >3VH2-A nrPDB Length = 616 Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 30/72 (41%), Positives = 43/72 (59%) Query: 66 LLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKA 125 ++ KVL++GAG LGC + + L G R+I +D T+ SN RQ L+ +D G+PKA Sbjct: 324 IIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKA 383 Query: 126 EVAAEFLNDRVP 137 E+AA L P Sbjct: 384 ELAAASLKRIFP 395 >3T7E-A nrPDB Length = 344 Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 30/72 (41%), Positives = 43/72 (59%) Query: 66 LLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKA 125 ++ KVL++GAG LGC + + L G R+I +D T+ SN RQ L+ +D G+PKA Sbjct: 35 IIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKA 94 Query: 126 EVAAEFLNDRVP 137 E+AA L P Sbjct: 95 ELAAASLKRIFP 106 >3H5A-A nrPDB Length = 358 Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 58/119 (48%), Gaps = 1/119 (0%) Query: 36 GRWNHVKKFLERSGPFTH-PDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFR 94 G +N+ + S F H + + +Q L KV+++G GG+G + LA SG Sbjct: 81 GEYNNSTENNRYSRNFLHYQSYGANPVLVQDKLKNAKVVILGCGGIGNHVSVILATSGIG 140 Query: 95 QIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKIQDFND 153 +I +ID D I+ +NL RQ LF D+G+ K EV L R +V I D+ D Sbjct: 141 EIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIALNINDYTD 199 >5FF5-A nrPDB Length = 381 Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 44/82 (53%) Query: 64 QFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRP 123 Q L KV + G GG G LA+SG + +ID D +++SN+NRQ L+R D+G+ Sbjct: 127 QERLKQSKVAIFGMGGWGTWCALQLAMSGIGTLRLIDGDDVELSNINRQVLYRTDDVGKN 186 Query: 124 KAEVAAEFLNDRVPNCNVVPHF 145 K + A + + N +V F Sbjct: 187 KVDAAKDTILAYNENVHVETFF 208 >4RDI-A nrPDB Length = 288 Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 1/81 (1%) Query: 61 ESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDI 120 ++LQ D + V+G GG+G + LA +G I +IDMD + V+N NRQ ++ Sbjct: 43 KALQLFADA-HICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNV 101 Query: 121 GRPKAEVAAEFLNDRVPNCNV 141 G KAEV AE + P C V Sbjct: 102 GLAKAEVMAERIRQINPECRV 122 >4P22-A nrPDB Length = 446 Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 5/75 (6%) Query: 67 LDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAE 126 L T VLV G GLG E+ KN+ L G + + + D T ++L+ QF R +DIG+ +AE Sbjct: 77 LQTSSVLVSGLRGLGVEIAKNIILGGVKAVTLHDQGTAQWADLSSQFYLREEDIGKNRAE 136 Query: 127 VA----AEFLNDRVP 137 V+ AE LN VP Sbjct: 137 VSQPRLAE-LNSYVP 150 >1TT5-A nrPDB Length = 531 Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 3/104 (2%) Query: 64 QFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRP 123 Q L++ V +I A G E+LKNL L G +ID + + + F + IG+ Sbjct: 27 QEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKN 86 Query: 124 KAEVAAEF---LNDRVPNCNVVPHFNKIQDFNDTFYRQFHIIVC 164 +AE A EF LN V V + D + +F+ +F ++V Sbjct: 87 RAEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVA 130 >5IAA-A nrPDB Length = 290 Score = 35.4 bits (80), Expect = 0.059, Method: Compositional matrix adjust. Identities = 39/160 (24%), Positives = 63/160 (39%), Gaps = 32/160 (20%) Query: 88 LALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNK 147 L G ++ + D D ++++N+NR F F+P G K + A L + P+ H Sbjct: 36 LTRCGIGKLLLFDYDKVELANMNRLF-FQPHQAGLSKVQAAEHTLRNINPDVLFEVHNYN 94 Query: 148 I------QDFNDTFY-------RQFHIIVCGLDSIIARRWINGMLISLLN--YEDGVLDP 192 I Q F D + +++ +D+ AR IN L E GV + Sbjct: 95 ITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELGQTWMESGVSE- 153 Query: 193 SSIVPLIDGGTEGFKGNARVILPGMTACIECTLELYPPQV 232 G+ ++I+PG +AC C PP V Sbjct: 154 -----------NAVSGHIQLIIPGESACFACA----PPLV 178 >2PX9-A nrPDB Length = 217 Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 3/74 (4%) Query: 231 QVNFPMCTIASMPRLPEHCIEYVRML--QWPKEQPFGEGVPLDGDDPEHIQWIFQKSLER 288 Q FP CTI + P P HCI + + L Q E+ + V D DPE W ++ R Sbjct: 2 QRTFPGCTIRNTPSEPIHCIVWAKYLFNQLFGEEDADQEVSPDRADPE-AAWEPTEAEAR 60 Query: 289 ASQYNIRGVTYRLT 302 A N G R++ Sbjct: 61 ARASNEDGDIKRIS 74 >3PVZ-A nrPDB Length = 399 Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust. Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 1/74 (1%) Query: 39 NHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVI-GAGGLGCELLKNLALSGFRQIH 97 N + + R H D + + LQ ++ + LV+ GAG +G + K + +++H Sbjct: 5 NSILSLIGRDTELFHQDINANEKELQSVVSQSRFLVLGGAGSIGQAVTKEIFKRNPQKLH 64 Query: 98 VIDMDTIDVSNLNR 111 V+D+ ++ L R Sbjct: 65 VVDISENNMVELVR 78 >2Q1T-A nrPDB Length = 377 Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust. Identities = 15/35 (42%), Positives = 22/35 (62%) Query: 66 LLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVID 100 L +T ++V GAG +G L+K L G Q+HV+D Sbjct: 30 LANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVD 64 >1UKV-G nrPDB Length = 453 Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust. Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 11/81 (13%) Query: 72 VLVIGAGGLGCELLKNLALSGFRQIHVIDMD-------TIDVSNLNRQFLFRPKDIGRPK 124 V+V+G G C L L++ G + +H+ D ++ +S L +F P K Sbjct: 14 VIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAASVTLSQLYEKFKQNP----ISK 69 Query: 125 AEVAAEFLNDRVPNCNVVPHF 145 E ++F DR N +++P F Sbjct: 70 EERESKFGKDRDWNVDLIPKF 90 >5C53-B nrPDB Length = 903 Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust. Identities = 31/116 (26%), Positives = 41/116 (35%), Gaps = 31/116 (26%) Query: 16 ELLAEKMAVDGGCGDTGDWEGRWNHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVI 75 ELL E+ + GG HVK E G HP+ S E + LL+ C+ Sbjct: 31 ELLTERSSPKGG------------HVKSHAELEGNGEHPEAPGSGEGSEALLEICQRRHF 78 Query: 76 -------------------GAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQ 112 G G LG EL KNLA + + V V L+ + Sbjct: 79 LSGSKQQLSRDSLLSGCHPGFGPLGVELRKNLAAEWWTSVVVFREQVFPVDALHHK 134 Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust. Identities = 31/116 (26%), Positives = 41/116 (35%), Gaps = 31/116 (26%) Query: 16 ELLAEKMAVDGGCGDTGDWEGRWNHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVI 75 ELL E+ + GG HVK E G HP+ S E + LL+ C+ Sbjct: 483 ELLTERSSPKGG------------HVKSHAELEGNGEHPEAPGSGEGSEALLEICQRRHF 530 Query: 76 -------------------GAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQ 112 G G LG EL KNLA + + V V L+ + Sbjct: 531 LSGSKQQLSRDSLLSGCHPGFGPLGVELRKNLAAEWWTSVVVFREQVFPVDALHHK 586 >3IKL-A nrPDB Length = 459 Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust. Identities = 31/116 (26%), Positives = 41/116 (35%), Gaps = 31/116 (26%) Query: 16 ELLAEKMAVDGGCGDTGDWEGRWNHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVI 75 ELL E+ + GG HVK E G HP+ S E + LL+ C+ Sbjct: 31 ELLTERSSPKGG------------HVKSHAELEGNGEHPEAPGSGEGSEALLEICQRRHF 78 Query: 76 -------------------GAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQ 112 G G LG EL KNLA + + V V L+ + Sbjct: 79 LSGSKQQLSRDSLLSGCHPGFGPLGVELRKNLAAEWWTSVVVFREQVFPVDALHHK 134 >3KYB-A nrPDB Length = 390 Score = 29.6 bits (65), Expect = 3.3, Method: Compositional matrix adjust. Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%) Query: 67 LDTCKVLVIGAGGLGCELLKNLALSGFRQIHVID 100 + + K+L++GAG G + + LA G Q+H+ID Sbjct: 1 MKSKKILIVGAGFSGAVIGRQLAEKG-HQVHIID 33 >1SC7-A nrPDB Length = 592 Score = 29.3 bits (64), Expect = 4.1, Method: Compositional matrix adjust. Identities = 12/26 (46%), Positives = 16/26 (61%) Query: 43 KFLERSGPFTHPDFEPSTESLQFLLD 68 KFLE GP P +EP E+++F D Sbjct: 45 KFLEHKGPVFAPPYEPLPENVKFYYD 70 >3DKB-A nrPDB Length = 390 Score = 28.5 bits (62), Expect = 7.0, Method: Compositional matrix adjust. Identities = 14/65 (21%), Positives = 28/65 (43%) Query: 9 KKRRRIEELLAEKMAVDGGCGDTGDWEGRWNHVKKFLERSGPFTHPDFEPSTESLQFLLD 68 K R ++E L +++ G C DT +W W+++ K P + ++ + Sbjct: 159 KFRWQLESLKSQEFVETGLCYDTRNWNDEWDNLIKMASTDTPMARSGLQYNSLEEIHIFV 218 Query: 69 TCKVL 73 C +L Sbjct: 219 LCNIL 223 >5C52-B nrPDB Length = 485 Score = 28.1 bits (61), Expect = 8.6, Method: Compositional matrix adjust. Identities = 31/116 (26%), Positives = 40/116 (34%), Gaps = 31/116 (26%) Query: 16 ELLAEKMAVDGGCGDTGDWEGRWNHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVI 75 ELL E+ + GG HVK E G HP+ S E LL+ C+ Sbjct: 31 ELLTERSSPKGG------------HVKSHAELEGNGEHPEAPGSGEGSLALLEICQRRHF 78 Query: 76 -------------------GAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQ 112 G G LG EL KNLA + + V V L+ + Sbjct: 79 LSGSKQQLSRDSLLSGCHPGFGPLGVELRKNLAAEWWTSVVVFREQVFPVDALHHK 134 >1PJ5-A nrPDB Length = 830 Score = 28.1 bits (61), Expect = 8.7, Method: Compositional matrix adjust. Identities = 12/41 (29%), Positives = 23/41 (56%) Query: 66 LLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDV 106 + T ++++IGAG +G L L G+ I V+D +++ Sbjct: 1 MASTPRIVIIGAGIVGTNLADELVTRGWNNITVLDQGPLNM 41 >5D1C-A nrPDB Length = 389 Score = 28.1 bits (61), Expect = 9.4, Method: Compositional matrix adjust. Identities = 10/27 (37%), Positives = 15/27 (55%) Query: 17 LLAEKMAVDGGCGDTGDWEGRWNHVKK 43 + A + +DG C +W G W+H KK Sbjct: 120 ITAAQCLIDGMCKVAINWSGGWHHAKK 146 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 1YOV-B nrPDB 776 0.0 2NVU-B nrPDB 749 0.0 3KYD-B nrPDB 315 3e-86 3KYC-B nrPDB 312 2e-85 1ZFN-A nrPDB 184 8e-47 3H5A-A nrPDB 169 3e-42 1Y8X-B nrPDB 163 2e-40 1JWB-B nrPDB 136 1e-32 6CWZ-C nrPDB 132 3e-31 1TT5-A nrPDB 124 1e-28 5FF5-A nrPDB 115 4e-26 4RDI-A nrPDB 108 5e-24 3VH2-A nrPDB 99 3e-21 3T7E-A nrPDB 99 3e-21 4P22-A nrPDB 96 3e-20 Sequences not found previously or not previously below threshold: 2PX9-A nrPDB 120 2e-27 4W5V-B nrPDB 109 3e-24 5FQ2-B nrPDB 109 3e-24 5IAA-A nrPDB 66 3e-11 4K28-A nrPDB 41 8e-04 3ZHS-A nrPDB 37 0.014 5ILO-A nrPDB 36 0.030 3PVZ-A nrPDB 35 0.085 2HAE-A nrPDB 33 0.26 3BO5-A nrPDB 32 0.45 3K6J-A nrPDB 32 0.61 5XWD-A nrPDB 32 0.74 4JJI-A nrPDB 32 0.82 4GGP-A nrPDB 31 1.00 5CEE-A nrPDB 31 1.1 1Z7L-A nrPDB 31 1.5 2OOE-A nrPDB 30 3.0 2V3B-A nrPDB 29 3.5 2ADD-A nrPDB 29 3.9 >1YOV-B nrPDB Length = 444 Score = 776 bits (2003), Expect = 0.0, Method: Composition-based stats. Identities = 442/443 (99%), Positives = 442/443 (99%) Query: 21 KMAVDGGCGDTGDWEGRWNHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGL 80 MAVDGGCGDTGDWEGRWNHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGL Sbjct: 2 SMAVDGGCGDTGDWEGRWNHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGL 61 Query: 81 GCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCN 140 GCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCN Sbjct: 62 GCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCN 121 Query: 141 VVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLID 200 VVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLID Sbjct: 122 VVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLID 181 Query: 201 GGTEGFKGNARVILPGMTACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRMLQWPK 260 GGTEGFKGNARVILPGMTACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRMLQWPK Sbjct: 182 GGTEGFKGNARVILPGMTACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRMLQWPK 241 Query: 261 EQPFGEGVPLDGDDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVI 320 EQPFGEGVPLDGDDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVI Sbjct: 242 EQPFGEGVPLDGDDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVI 301 Query: 321 AAVCATEVFKIATSAYIPLNNYLVFNDVDGLYTYTFEAERKENCPACSQLPQNIQFSPSA 380 AAVCATEVFKIATSAYIPLNNYLVFNDVDGLYTYTFEAERKENCPACSQLPQNIQFSPSA Sbjct: 302 AAVCATEVFKIATSAYIPLNNYLVFNDVDGLYTYTFEAERKENCPACSQLPQNIQFSPSA 361 Query: 381 KLQEVLDYLTNSASLQMKSPAITATLEGKNRTLYLQSVTSIEERTRPNLSKTLKELGLVD 440 KLQEVLDYLTNSASLQMKSPAITATLEGKNRTLYLQSVTSIEERTRPNLSKTLKELGLVD Sbjct: 362 KLQEVLDYLTNSASLQMKSPAITATLEGKNRTLYLQSVTSIEERTRPNLSKTLKELGLVD 421 Query: 441 GQELAVADVTTPQTVLFKLHFTS 463 GQELAVADVTTPQTVLFKLHFTS Sbjct: 422 GQELAVADVTTPQTVLFKLHFTS 444 >2NVU-B nrPDB Length = 805 Score = 749 bits (1933), Expect = 0.0, Method: Composition-based stats. Identities = 431/432 (99%), Positives = 431/432 (99%) Query: 32 GDWEGRWNHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALS 91 DWEGRWNHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALS Sbjct: 374 ADWEGRWNHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALS 433 Query: 92 GFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKIQDF 151 GFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKIQDF Sbjct: 434 GFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKIQDF 493 Query: 152 NDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFKGNAR 211 NDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFKGNAR Sbjct: 494 NDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFKGNAR 553 Query: 212 VILPGMTACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRMLQWPKEQPFGEGVPLD 271 VILPGMTACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRMLQWPKEQPFGEGVPLD Sbjct: 554 VILPGMTACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRMLQWPKEQPFGEGVPLD 613 Query: 272 GDDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKI 331 GDDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKI Sbjct: 614 GDDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKI 673 Query: 332 ATSAYIPLNNYLVFNDVDGLYTYTFEAERKENCPACSQLPQNIQFSPSAKLQEVLDYLTN 391 ATSAYIPLNNYLVFNDVDGLYTYTFEAERKENCPACSQLPQNIQFSPSAKLQEVLDYLTN Sbjct: 674 ATSAYIPLNNYLVFNDVDGLYTYTFEAERKENCPACSQLPQNIQFSPSAKLQEVLDYLTN 733 Query: 392 SASLQMKSPAITATLEGKNRTLYLQSVTSIEERTRPNLSKTLKELGLVDGQELAVADVTT 451 SASLQMKSPAITATLEGKNRTLYLQSVTSIEERTRPNLSKTLKELGLVDGQELAVADVTT Sbjct: 734 SASLQMKSPAITATLEGKNRTLYLQSVTSIEERTRPNLSKTLKELGLVDGQELAVADVTT 793 Query: 452 PQTVLFKLHFTS 463 PQTVLFKLHFTS Sbjct: 794 PQTVLFKLHFTS 805 >3KYD-B nrPDB Length = 551 Score = 315 bits (806), Expect = 3e-86, Method: Composition-based stats. Identities = 100/247 (40%), Positives = 137/247 (55%), Gaps = 19/247 (7%) Query: 60 TESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKD 119 L + +VLV+GAGG+GCELLKNL L+GF I +ID+DTIDVSNLNRQFLF+ K Sbjct: 10 PRELAEAVAGGRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKH 69 Query: 120 IGRPKAEVAAEFLNDRVPNCNVVPHFNKIQ--DFNDTFYRQFHIIVCGLDSIIARRWING 177 +GR KA+VA E + P N+V + + I D+N F+RQF +++ LD+ AR +N Sbjct: 70 VGRSKAQVAKESVLQFYPKANIVAYHDSIMNPDYNVEFFRQFILVMNALDNRAARNHVNR 129 Query: 178 MLISLLNYEDGVLDPSSIVPLIDGGTEGFKGNARVILPGMTACIECTLELYPPQVNFPMC 237 M ++ + VPLI+ GT G+ G I G+T C EC + P Q FP C Sbjct: 130 MCLA------------ADVPLIESGTAGYLGQVTTIKKGVTECYECHPK--PTQRTFPGC 175 Query: 238 TIASMPRLPEHCIEYVRML--QWPKEQPFGEGVPLDGDDPEHIQWIFQKSLERASQYNIR 295 TI + P P HCI + + L Q E+ + V D DPE W ++ RA N Sbjct: 176 TIRNTPSEPIHCIVWAKYLFNQLFGEEDADQEVSPDRADPE-AAWEPTEAEARARACNED 234 Query: 296 GVTYRLT 302 G R++ Sbjct: 235 GDIKRIS 241 Score = 220 bits (560), Expect = 1e-57, Method: Composition-based stats. Identities = 48/207 (23%), Positives = 79/207 (38%), Gaps = 17/207 (8%) Query: 261 EQPFGEGVPLDGDDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVI 320 E+ G + D DDP + ++ + R +++ + + + IIPA+A+TNAVI Sbjct: 337 EKGDGAELIWDKDDPSAMDFVTSAANLRMHIFSMNMKSRFDIKSMAGNIIPAIATTNAVI 396 Query: 321 AAVCATEVFKIATSAYIPLNNYLVF---NDVDGLYTYTFEAERKENCPACSQLPQ----- 372 A + E KI + + N L NC C+ P+ Sbjct: 397 AGLIVLEGLKILSGKIDQCRTIFLNKQPNPRKKLLVPCALDPPNPNCYVCASKPEVTVRL 456 Query: 373 NIQFSPSAKLQEVLDYLTNSASLQMKSPAITATLEGKNRTLYLQSVTSIEERTRPNLSKT 432 N+ LQ+ + M +P + +GK L ++S E T N K Sbjct: 457 NVHKVTVLTLQDKI----VKEKFAMVAPDVQIE-DGKGTIL----ISSEEGETEANNHKK 507 Query: 433 LKELGLVDGQELAVADVTTPQTVLFKL 459 L E G+ +G L D T+L + Sbjct: 508 LSEFGIRNGSRLQADDFLQDYTLLINI 534 >3KYC-B nrPDB Length = 660 Score = 312 bits (800), Expect = 2e-85, Method: Composition-based stats. Identities = 100/247 (40%), Positives = 137/247 (55%), Gaps = 19/247 (7%) Query: 60 TESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKD 119 L + +VLV+GAGG+GCELLKNL L+GF I +ID+DTIDVSNLNRQFLF+ K Sbjct: 28 PRELAEAVAGGRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKH 87 Query: 120 IGRPKAEVAAEFLNDRVPNCNVVPHFNKIQ--DFNDTFYRQFHIIVCGLDSIIARRWING 177 +GR KA+VA E + P N+V + + I D+N F+RQF +++ LD+ AR +N Sbjct: 88 VGRSKAQVAKESVLQFYPKANIVAYHDSIMNPDYNVEFFRQFILVMNALDNRAARNHVNR 147 Query: 178 MLISLLNYEDGVLDPSSIVPLIDGGTEGFKGNARVILPGMTACIECTLELYPPQVNFPMC 237 M ++ + VPLI+ GT G+ G I G+T C EC + P Q FP C Sbjct: 148 MCLA------------ADVPLIESGTAGYLGQVTTIKKGVTECYECHPK--PTQRTFPGC 193 Query: 238 TIASMPRLPEHCIEYVRML--QWPKEQPFGEGVPLDGDDPEHIQWIFQKSLERASQYNIR 295 TI + P P HCI + + L Q E+ + V D DPE W ++ RA N Sbjct: 194 TIRNTPSEPIHCIVWAKYLFNQLFGEEDADQEVSPDRADPE-AAWEPTEAEARARACNED 252 Query: 296 GVTYRLT 302 G R++ Sbjct: 253 GDIKRIS 259 Score = 218 bits (555), Expect = 4e-57, Method: Composition-based stats. Identities = 48/207 (23%), Positives = 79/207 (38%), Gaps = 17/207 (8%) Query: 261 EQPFGEGVPLDGDDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVI 320 E+ G + D DDP + ++ + R +++ + + + IIPA+A+TNAVI Sbjct: 355 EKGDGAELIWDKDDPSAMDFVTSAANLRMHIFSMNMKSRFDIKSMAGNIIPAIATTNAVI 414 Query: 321 AAVCATEVFKIATSAYIPLNNYLVF---NDVDGLYTYTFEAERKENCPACSQLPQ----- 372 A + E KI + + N L NC C+ P+ Sbjct: 415 AGLIVLEGLKILSGKIDQCRTIFLNKQPNPRKKLLVPCALDPPNPNCYVCASKPEVTVRL 474 Query: 373 NIQFSPSAKLQEVLDYLTNSASLQMKSPAITATLEGKNRTLYLQSVTSIEERTRPNLSKT 432 N+ LQ+ + M +P + +GK L ++S E T N K Sbjct: 475 NVHKVTVLTLQDKI----VKEKFAMVAPDVQIE-DGKGTIL----ISSEEGETEANNHKK 525 Query: 433 LKELGLVDGQELAVADVTTPQTVLFKL 459 L E G+ +G L D T+L + Sbjct: 526 LSEFGIRNGSRLQADDFLQDYTLLINI 552 >1ZFN-A nrPDB Length = 253 Score = 184 bits (466), Expect = 8e-47, Method: Composition-based stats. Identities = 72/269 (26%), Positives = 110/269 (40%), Gaps = 38/269 (14%) Query: 40 HVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVI 99 + + F+ S D Q L +VL+IG GGLG LA +G + + Sbjct: 4 NDRDFMRYSRQILLDDIALDG---QQKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLA 60 Query: 100 DMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKI--QDFNDTFYR 157 D D + +SNL RQ LF +DI RPK++V+ + L P+ + ++ + D R Sbjct: 61 DDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQRLTGEALKDAVAR 120 Query: 158 QFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFKGNARVILPGM 217 ++ C D++ R+ IN ++L PLI GF G V+ P Sbjct: 121 ADVVLDC-TDNMATRQEINAACVAL------------NTPLITASAVGFGGQLMVLTPPW 167 Query: 218 -TACIECTLELYP----PQVNFPMCTIASMPRLPEHCIEYVRMLQWPK-----EQPFGEG 267 C C L+P P+ N C A + + ++ L+ K E P GE Sbjct: 168 EQGCYRC---LWPDNQEPERN---CRTAGVVGPVVGVMGTLQALEAIKLLSGIETPAGEL 221 Query: 268 VPLDGDDPEHIQWIFQKSLERASQYNIRG 296 DG + QW +L RAS + G Sbjct: 222 RLFDG---KSSQWR-SLALRRASGCPVCG 246 >3H5A-A nrPDB Length = 358 Score = 169 bits (427), Expect = 3e-42, Method: Composition-based stats. Identities = 52/195 (26%), Positives = 79/195 (40%), Gaps = 22/195 (11%) Query: 36 GRWNHVKKFLERSGPFTH-PDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFR 94 G +N+ + S F H + + +Q L KV+++G GG+G + LA SG Sbjct: 81 GEYNNSTENNRYSRNFLHYQSYGANPVLVQDKLKNAKVVILGCGGIGNHVSVILATSGIG 140 Query: 95 QIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKIQDFND- 153 +I +ID D I+ +NL RQ LF D+G+ K EV L R +V I D+ D Sbjct: 141 EIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIALNINDYTDL 200 Query: 154 -TFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFKGNARV 212 +V W+N + + P I+ G+ + V Sbjct: 201 HKVPEADIWVVSADHPFNLINWVNKYCV------------RANQPYINA---GYVNDIAV 245 Query: 213 I----LPGMTACIEC 223 +PG T C EC Sbjct: 246 FGPLYVPGKTGCYEC 260 >1Y8X-B nrPDB Length = 98 Score = 163 bits (411), Expect = 2e-40, Method: Composition-based stats. Identities = 95/97 (97%), Positives = 96/97 (98%) Query: 367 CSQLPQNIQFSPSAKLQEVLDYLTNSASLQMKSPAITATLEGKNRTLYLQSVTSIEERTR 426 SQLPQNIQFSPSAKLQEVLDYLTNSASLQMKSPAITATLEGKNRTLY+QSVTSIEERTR Sbjct: 2 SSQLPQNIQFSPSAKLQEVLDYLTNSASLQMKSPAITATLEGKNRTLYMQSVTSIEERTR 61 Query: 427 PNLSKTLKELGLVDGQELAVADVTTPQTVLFKLHFTS 463 PNLSKTLKELGLVDGQELAVADVTTPQTVLFKLHFTS Sbjct: 62 PNLSKTLKELGLVDGQELAVADVTTPQTVLFKLHFTS 98 >1JWB-B nrPDB Length = 249 Score = 136 bits (343), Expect = 1e-32, Method: Composition-based stats. Identities = 46/190 (24%), Positives = 76/190 (40%), Gaps = 19/190 (10%) Query: 42 KKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDM 101 ++ L + F+ Q L +VL++G GGLGC + LA +G + ++D Sbjct: 7 QEMLRYNRQIILRGFDFDG---QEALKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDF 63 Query: 102 DTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKIQDFNDT--FYRQF 159 DT+ +SNL RQ L +G+PK E A + L P+ + P + D Sbjct: 64 DTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALLDDAELAALIAEHD 123 Query: 160 HIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFKGNARVIL-PGMT 218 ++ C D++ R +N + + VPL+ G +G V Sbjct: 124 LVLDC-TDNVAVRNQLNAGCFA------------AKVPLVSGAAIRMEGQITVFTYQDGE 170 Query: 219 ACIECTLELY 228 C C L+ Sbjct: 171 PCYRCLSRLF 180 >6CWZ-C nrPDB Length = 346 Score = 132 bits (332), Expect = 3e-31, Method: Composition-based stats. Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 3/115 (2%) Query: 64 QFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRP 123 Q L +VL++G GLG E+ KNL L+G + + ++D + + + QFL R +GR Sbjct: 31 QKRLRASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRN 90 Query: 124 KAEVAAEFLNDRVPNCNVVPHFNKIQDFNDTFYRQFHII---VCGLDSIIARRWI 175 +AE + E + P +V I+ ++F+ QF + C D I+ I Sbjct: 91 RAEASLERAQNLNPMVDVKVDTEDIEKKPESFFTQFDAVCLTCCSRDVIVKVDQI 145 Score = 29.3 bits (64), Expect = 3.5, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 23/50 (46%) Query: 301 LTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNNYLVFNDVDG 350 L + V+ +A AV+ + A E+ K + P NN+ F+ + G Sbjct: 287 LPEDFVRYCFSEMAPVCAVVGGILAQEIVKALSQRDPPHNNFFFFDGMKG 336 >1TT5-A nrPDB Length = 531 Score = 124 bits (310), Expect = 1e-28, Method: Composition-based stats. Identities = 38/155 (24%), Positives = 65/155 (41%), Gaps = 15/155 (9%) Query: 64 QFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRP 123 Q L++ V +I A G E+LKNL L G +ID + + + F + IG+ Sbjct: 27 QEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKN 86 Query: 124 KAEVAAEFLNDRVPNC---NVVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLI 180 +AE A EFL + + V + D + +F+ +F ++V L Sbjct: 87 RAEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVAT------------QLP 134 Query: 181 SLLNYEDGVLDPSSIVPLIDGGTEGFKGNARVILP 215 + + +S +PL+ T G G R+I+ Sbjct: 135 ESTSLRLADVLWNSQIPLLICRTYGLVGYMRIIIK 169 >2PX9-A nrPDB Length = 217 Score = 120 bits (300), Expect = 2e-27, Method: Composition-based stats. Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 3/75 (4%) Query: 230 PQVNFPMCTIASMPRLPEHCIEYVRML--QWPKEQPFGEGVPLDGDDPEHIQWIFQKSLE 287 Q FP CTI + P P HCI + + L Q E+ + V D DPE W ++ Sbjct: 1 TQRTFPGCTIRNTPSEPIHCIVWAKYLFNQLFGEEDADQEVSPDRADPE-AAWEPTEAEA 59 Query: 288 RASQYNIRGVTYRLT 302 RA N G R++ Sbjct: 60 RARASNEDGDIKRIS 74 >5FF5-A nrPDB Length = 381 Score = 115 bits (288), Expect = 4e-26, Method: Composition-based stats. Identities = 29/87 (33%), Positives = 44/87 (50%) Query: 60 TESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKD 119 Q L KV + G GG G LA+SG + +ID D +++SN+NRQ L+R D Sbjct: 123 PFVYQERLKQSKVAIFGMGGWGTWCALQLAMSGIGTLRLIDGDDVELSNINRQVLYRTDD 182 Query: 120 IGRPKAEVAAEFLNDRVPNCNVVPHFN 146 +G+ K + A + + N +V F Sbjct: 183 VGKNKVDAAKDTILAYNENVHVETFFE 209 >4W5V-B nrPDB Length = 122 Score = 109 bits (272), Expect = 3e-24, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 36/98 (36%), Gaps = 14/98 (14%) Query: 367 CSQLPQ-----NIQFSPSAKLQEVLDYLTNSASLQMKSPAITATLEGKNRTLYLQSVTSI 421 + P+ N+ LQ+ + M +P + +GK L ++S Sbjct: 5 SASKPEVTVRLNVHKVTVLTLQDKI----VKEKFAMVAPDVQIE-DGKGTIL----ISSE 55 Query: 422 EERTRPNLSKTLKELGLVDGQELAVADVTTPQTVLFKL 459 E T N K L E G+ +G L D T+L + Sbjct: 56 EGETEANNHKKLSEFGIRNGSRLQADDFLQDYTLLINI 93 >5FQ2-B nrPDB Length = 105 Score = 109 bits (272), Expect = 3e-24, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 35/96 (36%), Gaps = 14/96 (14%) Query: 369 QLPQ-----NIQFSPSAKLQEVLDYLTNSASLQMKSPAITATLEGKNRTLYLQSVTSIEE 423 P+ N+ LQ+ + M +P + +GK L ++S E Sbjct: 4 SKPEVTVRLNVHKVTVLTLQDKI----VKEKFAMVAPDVQIE-DGKGTIL----ISSEEG 54 Query: 424 RTRPNLSKTLKELGLVDGQELAVADVTTPQTVLFKL 459 T N K L E G+ +G L D T+L + Sbjct: 55 ETEANNHKKLSEFGIRNGSRLQADDFLQDYTLLINI 90 >4RDI-A nrPDB Length = 288 Score = 108 bits (269), Expect = 5e-24, Method: Composition-based stats. Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 15/147 (10%) Query: 61 ESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDI 120 ++LQ D + V+G GG+G + LA +G I +IDMD + V+N NRQ ++ Sbjct: 43 KALQLFAD-AHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNV 101 Query: 121 GRPKAEVAAEFLNDRVPNCNVVPHFNKIQDFNDTFYRQ--FHIIVCGLDSIIARRWINGM 178 G KAEV AE + P C V + + N Y + ++ +DS+ + + Sbjct: 102 GLAKAEVMAERIRQINPECRVTVVDDFVTPDNVAQYMSVGYSYVIDAIDSVRPKAALIAY 161 Query: 179 LISLLNYEDGVLDPSSIVPLIDGGTEG 205 + +PL+ G G Sbjct: 162 C------------RRNKIPLVTTGGAG 176 >3VH2-A nrPDB Length = 616 Score = 99.5 bits (246), Expect = 3e-21, Method: Composition-based stats. Identities = 50/201 (24%), Positives = 78/201 (38%), Gaps = 27/201 (13%) Query: 60 TESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKD 119 + ++ KVL++GAG LGC + + L G R+I +D T+ SN RQ L+ +D Sbjct: 318 PDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFED 377 Query: 120 IGRPKAEVAAEFLNDRVPNCNVVPHFNKI--------------QDFN--DTFYRQFHIIV 163 G+PKAE+AA L P + I +DF+ ++ II Sbjct: 378 CGKPKAELAAASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIF 437 Query: 164 CGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFKGNARVILPGMTACIEC 223 +DS +R W+ +L ++ N L+ GN C C Sbjct: 438 LLVDSRESR-WLPSLLSNIENKTVINAALGFDSYLVMR-----HGNRDEQSSKQLGCYFC 491 Query: 224 TLELYP----PQVNF-PMCTI 239 + P MCT+ Sbjct: 492 HDVVAPTDSLTDRTLDQMCTV 512 >3T7E-A nrPDB Length = 344 Score = 99.5 bits (246), Expect = 3e-21, Method: Composition-based stats. Identities = 50/201 (24%), Positives = 78/201 (38%), Gaps = 27/201 (13%) Query: 60 TESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKD 119 + ++ KVL++GAG LGC + + L G R+I +D T+ SN RQ L+ +D Sbjct: 29 PDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFED 88 Query: 120 IGRPKAEVAAEFLNDRVPNCNVVPHFNKI--------------QDFN--DTFYRQFHIIV 163 G+PKAE+AA L P + I +DF+ ++ II Sbjct: 89 CGKPKAELAAASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIF 148 Query: 164 CGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFKGNARVILPGMTACIEC 223 +DS +R W+ +L ++ N L+ GN C C Sbjct: 149 LLVDSRESR-WLPSLLSNIENKTVINAALGFDSYLVMR-----HGNRDEQSSKQLGCYFC 202 Query: 224 TLELYP----PQVNF-PMCTI 239 + P MCT+ Sbjct: 203 HDVVAPTDSLTDRTLDQMCTV 223 >4P22-A nrPDB Length = 446 Score = 96.4 bits (238), Expect = 3e-20, Method: Composition-based stats. Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 3/99 (3%) Query: 65 FLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPK 124 L T VLV G GLG E+ KN+ L G + + + D T ++L+ QF R +DIG+ + Sbjct: 75 KRLQTSSVLVSGLRGLGVEIAKNIILGGVKAVTLHDQGTAQWADLSSQFYLREEDIGKNR 134 Query: 125 AEVAAEFLNDRVPNCNVVPHFNKIQDFNDTFYRQFHIIV 163 AEV+ L + V + + + F F ++V Sbjct: 135 AEVSQPRLAELNSYVPVTAYTGPLV---EDFLSGFQVVV 170 >5IAA-A nrPDB Length = 290 Score = 65.9 bits (159), Expect = 3e-11, Method: Composition-based stats. Identities = 39/180 (21%), Positives = 71/180 (39%), Gaps = 32/180 (17%) Query: 65 FLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPK 124 + T V ++G GG+G + L G ++ + D D ++++N+NR F+P G K Sbjct: 13 EKIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNR-LFFQPHQAGLSK 71 Query: 125 AEVAAEFLNDRVPNCNVVPHFNKIQDFNDTFYRQF---------------HIIVCGLDSI 169 + A L + P+ H I ++ F +++ +D+ Sbjct: 72 VQAAEHTLRNINPDVLFEVHNYNIT--TVENFQHFMDRISNGGLEEGKPVDLVLSCVDNF 129 Query: 170 IARRWINGML--ISLLNYEDGVLDPSSIVPLIDGGTEGFKGNARVILPGMTACIECTLEL 227 AR IN + E GV + + G+ ++I+PG +AC C L Sbjct: 130 EARMTINTACNELGQTWMESGVSENAVS------------GHIQLIIPGESACFACAPPL 177 >4K28-A nrPDB Length = 269 Score = 41.3 bits (95), Expect = 8e-04, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 48/135 (35%), Gaps = 31/135 (22%) Query: 71 KVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAE 130 + LVIG GG+G + LA +G I + D T + E Sbjct: 127 RALVIGCGGVGSAIAYALAEAGIASITLCDPSTA-------------------RMGAVCE 167 Query: 131 FLNDRVPNCNVVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRW--INGMLISLLNYEDG 188 L + P V F+ ++DF+ + + R ++ L++ L + Sbjct: 168 LLGNGFPGLTVSTQFSGLEDFD-------LVANASPVGMGTRAELPLSAALLATLQPDTL 220 Query: 189 VLD---PSSIVPLID 200 V D I PL++ Sbjct: 221 VADVVTSPEITPLLN 235 >3ZHS-A nrPDB Length = 868 Score = 37.4 bits (85), Expect = 0.014, Method: Composition-based stats. Identities = 62/306 (20%), Positives = 100/306 (32%), Gaps = 41/306 (13%) Query: 182 LLNYEDGVLDPSSIVPLIDGGTEGFKGN---ARVILPGMTACIECTLELYPPQVNFPMCT 238 L E+G + S+VPL+ G F G A + + ++ N T Sbjct: 265 LDTGEEGSDNRFSVVPLMLHGDAAFAGQGVVAETLNLALLRGYRTGGTIHIVVNNQIGFT 324 Query: 239 IASM-PRLPEHCIEYVRMLQWPKEQPFGEGVPLDGDDPEHIQWIFQKSLE---------- 287 A R E+C + +M+ P ++GDDPE W+ + +++ Sbjct: 325 TAPTDSRSSEYCTDVAKMIGAPI-------FHVNGDDPEACAWVARLAVDFRQAFKKDVV 377 Query: 288 ------RASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNN 341 R +N G +TQ + +I + A L + Sbjct: 378 IDMLCYRRRGHNE-GDDPSMTQPYMYDVIDTKRGSRKAYTEALIGRGDISMKEAEDALRD 436 Query: 342 Y-----LVFNDVDGLYTYTFEAERKENCPACSQLPQNIQF-SPSAKLQEVLD-YLTNSAS 394 Y VFN+V L + E E E+ A Q+P + A LQ + D +L Sbjct: 437 YQGQLERVFNEVRELEKH--EIEPSESVEADQQIPSKLATAVDKAMLQRIGDAHLALPEG 494 Query: 395 LQMKSPAITATLEGKNRTLYLQSVTSIEERTRPNLSKTLKELGLV--DGQELAVADVTTP 452 P + LE + Y + L + E LV GQ+ T Sbjct: 495 FT-VHPRVRPVLEKRREMAYEGRIDWAFAELLA-LGSLIAEGKLVRLSGQDTQRGTFTQR 552 Query: 453 QTVLFK 458 V+ Sbjct: 553 HAVIVD 558 >5ILO-A nrPDB Length = 271 Score = 36.3 bits (82), Expect = 0.030, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 39/90 (43%), Gaps = 8/90 (8%) Query: 72 VLVIGAGGLGCELLKNLALSGFRQIHVIDMDT-------IDVSNLNRQFLFRPKDIGRPK 124 V+ GAGG+G ++ K L +G ++ +ID+ + ++ + + D+ K Sbjct: 19 VVTGGAGGIGLQVSKQLLAAGAAKVAIIDLQDNLEEFVKLRAAHPTQSVMIIKMDVANKK 78 Query: 125 -AEVAAEFLNDRVPNCNVVPHFNKIQDFND 153 E E + N ++V + I + D Sbjct: 79 GVEATYEEIAKTFGNIDIVVNVAGIFNDKD 108 >3PVZ-A nrPDB Length = 399 Score = 34.7 bits (78), Expect = 0.085, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 1/76 (1%) Query: 39 NHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVI-GAGGLGCELLKNLALSGFRQIH 97 N + + R H D + + LQ ++ + LV+ GAG +G + K + +++H Sbjct: 5 NSILSLIGRDTELFHQDINANEKELQSVVSQSRFLVLGGAGSIGQAVTKEIFKRNPQKLH 64 Query: 98 VIDMDTIDVSNLNRQF 113 V+D+ ++ L R Sbjct: 65 VVDISENNMVELVRDI 80 >2HAE-A nrPDB Length = 386 Score = 33.2 bits (74), Expect = 0.26, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 39/119 (32%), Gaps = 19/119 (15%) Query: 61 ESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDI 120 + + ++ KV+V G G G ++K L G + + +D I N P+ Sbjct: 174 KLTEKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNEN-------DPETC 226 Query: 121 GRPKAEVAAEFLNDRVPNCNVVPHFNKIQ-DFNDTFYRQFHIIVCGLDSIIARRWINGM 178 LN+ + + ++ D I +I+ WI M Sbjct: 227 -----------LNEYHLEIARITNPERLSGDLETALEGADFFIGVSRGNILKPEWIKKM 274 >3BO5-A nrPDB Length = 290 Score = 32.4 bits (72), Expect = 0.45, Method: Composition-based stats. Identities = 9/21 (42%), Positives = 10/21 (47%) Query: 229 PPQVNFPMCTIASMPRLPEHC 249 P Q+ FP C P LP C Sbjct: 54 PTQITFPGCICVKTPCLPGTC 74 >3K6J-A nrPDB Length = 460 Score = 32.0 bits (71), Expect = 0.61, Method: Composition-based stats. Identities = 13/84 (15%), Positives = 30/84 (35%), Gaps = 5/84 (5%) Query: 65 FLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPK 124 D V +IG G +G + L+G V+ + L + ++ + + Sbjct: 50 EAYDVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQRCKQEL--EVMYARE---KSF 104 Query: 125 AEVAAEFLNDRVPNCNVVPHFNKI 148 + + + N + F+K+ Sbjct: 105 KRLNDKRIEKINANLKITSDFHKL 128 >5XWD-A nrPDB Length = 651 Score = 31.7 bits (70), Expect = 0.74, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 5/42 (11%) Query: 218 TACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRMLQWP 259 + CI+C E P +N I R P++CI+ + P Sbjct: 553 SECIQCHPECLPQAMN-----ITCTGRGPDNCIQCAHYIDGP 589 >4JJI-A nrPDB Length = 378 Score = 31.7 bits (70), Expect = 0.82, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 3/64 (4%) Query: 70 CKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNR---QFLFRPKDIGRPKAE 126 V + G G +G + + +G +I ID+D+ + PKD +P E Sbjct: 195 SNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQE 254 Query: 127 VAAE 130 V + Sbjct: 255 VIVD 258 >4GGP-A nrPDB Length = 401 Score = 31.3 bits (69), Expect = 1.00, Method: Composition-based stats. Identities = 26/100 (26%), Positives = 35/100 (35%), Gaps = 3/100 (3%) Query: 50 PFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNL 109 PFT E S E V V+G + K L+ G + I + + Sbjct: 180 PFTGELKEISAEPANDEEAAATVKVMGGEDWERWI-KQLSKEGLLEEGCITLAYSYIGPE 238 Query: 110 NRQFLFRPKDIGRPK--AEVAAEFLNDRVPNCNVVPHFNK 147 Q L+R IG+ K E A LN P+ NK Sbjct: 239 ATQALYRKGTIGKAKEHLEATAHRLNKENPSIRAFVSVNK 278 >5CEE-A nrPDB Length = 413 Score = 31.3 bits (69), Expect = 1.1, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 21/40 (52%) Query: 61 ESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVID 100 + ++ ++ +V++ GAG G + K L L + ++D Sbjct: 199 KVVKKSIEDVQVVINGAGSAGMAIAKMLLLLKVNNVVLVD 238 >1Z7L-A nrPDB Length = 276 Score = 30.5 bits (67), Expect = 1.5, Method: Composition-based stats. Identities = 7/24 (29%), Positives = 15/24 (62%) Query: 231 QVNFPMCTIASMPRLPEHCIEYVR 254 + + P+CT+ + P EH +++ R Sbjct: 11 EKSIPICTLKNFPNAIEHTLQWAR 34 >2OOE-A nrPDB Length = 530 Score = 29.7 bits (65), Expect = 3.0, Method: Composition-based stats. Identities = 7/32 (21%), Positives = 13/32 (40%) Query: 232 VNFPMCTIASMPRLPEHCIEYVRMLQWPKEQP 263 N P + P+ + + + +QW K P Sbjct: 213 RNAPSVPPQNTPQEAQQVDMWKKYIQWEKSNP 244 >2V3B-A nrPDB Length = 384 Score = 29.3 bits (64), Expect = 3.5, Method: Composition-based stats. Identities = 13/38 (34%), Positives = 19/38 (50%) Query: 55 DFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSG 92 D E Q +VL++GAG +GCE +L+ G Sbjct: 131 DLEDYARFRQAAAGKRRVLLLGAGLIGCEFANDLSSGG 168 >2ADD-A nrPDB Length = 543 Score = 29.3 bits (64), Expect = 3.9, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 28/73 (38%), Gaps = 2/73 (2%) Query: 258 WPKEQPFGEGVPLDGDDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTN 317 W Q F + +D + + IQW + +E Q + L G V I +A++ Sbjct: 307 WAGLQSFPRALWIDRNGKQLIQW-PVEEIEELRQNQVNLQNKNLKPGSVLE-IHGIAASQ 364 Query: 318 AVIAAVCATEVFK 330 A + E K Sbjct: 365 ADVTISFKLEGLK 377 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.309 0.126 0.337 Lambda K H 0.267 0.0387 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 16,794,528 Number of Sequences: 36641 Number of extensions: 660813 Number of successful extensions: 2062 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 50 Number of HSP's successfully gapped in prelim test: 17 Number of HSP's that attempted gapping in prelim test: 1959 Number of HSP's gapped (non-prelim): 80 length of query: 463 length of database: 10,336,785 effective HSP length: 100 effective length of query: 363 effective length of database: 6,672,685 effective search space: 2422184655 effective search space used: 2422184655 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 61 (28.2 bits)