BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q8R527 (205 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 2ATX-A nrPDB 382 e-107 3VHL-B nrPDB 270 4e-73 3TH5-A nrPDB 248 9e-67 3RYT-C nrPDB 248 1e-66 2WKQ-A nrPDB 247 2e-66 2W2X-A nrPDB 239 5e-64 1RYH-A nrPDB 238 1e-63 5C2K-A nrPDB 211 1e-55 2Q3H-A nrPDB 211 2e-55 2J0V-A nrPDB 209 6e-55 5ZHX-e nrPDB 208 1e-54 3BWD-D nrPDB 207 2e-54 2NTY-C nrPDB 207 2e-54 5JCP-B nrPDB 206 4e-54 2WBL-C nrPDB 206 5e-54 4MIT-A nrPDB 202 1e-52 2FV8-A nrPDB 201 2e-52 5VCU-A nrPDB 201 2e-52 4U5X-A nrPDB 198 1e-51 5ZVP-A nrPDB 191 2e-49 3A58-B nrPDB 190 3e-49 5HZH-A nrPDB 186 7e-48 2J1L-A nrPDB 176 7e-45 1M7B-A nrPDB 162 7e-41 1GWN-A nrPDB 162 8e-41 3REG-A nrPDB 156 6e-39 2REX-B nrPDB 134 3e-32 5CM8-B nrPDB 95 2e-20 4M8N-E nrPDB 93 1e-19 1YZU-A nrPDB 92 2e-19 2KE5-A nrPDB 90 7e-19 1ZC4-A nrPDB 90 7e-19 4RKF-A nrPDB 87 5e-18 1EK0-A nrPDB 87 5e-18 4DXA-A nrPDB 87 5e-18 2OCY-C nrPDB 87 6e-18 3CPH-A nrPDB 87 6e-18 3RAB-A nrPDB 86 1e-17 2GF9-A nrPDB 86 1e-17 2RHD-A nrPDB 85 2e-17 2G6B-A nrPDB 85 2e-17 2OCB-A nrPDB 84 3e-17 3DZ8-A nrPDB 84 4e-17 4LHX-A nrPDB 84 4e-17 5SZI-A nrPDB 84 4e-17 1WMS-A nrPDB 83 7e-17 4QXA-A nrPDB 83 7e-17 3L0I-B nrPDB 82 1e-16 1ZBD-A nrPDB 82 1e-16 2WWX-A nrPDB 82 1e-16 5LPN-A nrPDB 81 3e-16 4KLZ-A nrPDB 81 3e-16 6O62-A nrPDB 81 3e-16 4G01-B nrPDB 80 4e-16 4FMC-F nrPDB 80 4e-16 5SZJ-A nrPDB 80 5e-16 5SZH-B nrPDB 80 5e-16 2FFQ-A nrPDB 80 6e-16 4PHF-A nrPDB 80 8e-16 2HUP-A nrPDB 78 3e-15 3CUE-F nrPDB 77 5e-15 2GIL-A nrPDB 77 6e-15 2F9L-A nrPDB 77 7e-15 6IF2-B nrPDB 77 7e-15 1YZN-A nrPDB 76 1e-14 2P5S-A nrPDB 75 2e-14 5LEF-A nrPDB 74 3e-14 4KU4-A nrPDB 74 4e-14 5LDD-C nrPDB 74 4e-14 5FBL-B nrPDB 74 5e-14 5WDQ-A nrPDB 74 5e-14 1X3S-A nrPDB 73 7e-14 3CPJ-B nrPDB 73 9e-14 6HUF-A nrPDB 72 1e-13 3CON-A nrPDB 72 1e-13 5UHV-A nrPDB 72 1e-13 5XR6-A nrPDB 72 2e-13 1Z0A-A nrPDB 72 2e-13 2IL1-A nrPDB 72 2e-13 3OES-A nrPDB 71 3e-13 2FG5-A nrPDB 71 3e-13 4UJ4-A nrPDB 71 3e-13 4WA7-A nrPDB 70 4e-13 2A5J-A nrPDB 70 5e-13 3RWM-B nrPDB 70 6e-13 1Z22-A nrPDB 70 7e-13 3BFK-A nrPDB 69 1e-12 4RKE-A nrPDB 69 2e-12 5UB8-A nrPDB 68 3e-12 2EW1-A nrPDB 68 3e-12 1Z06-A nrPDB 68 3e-12 2ATV-A nrPDB 68 3e-12 3BC1-A nrPDB 67 5e-12 2ERX-A nrPDB 67 7e-12 2G77-B nrPDB 67 7e-12 3RAP-R nrPDB 67 8e-12 3T5G-A nrPDB 66 9e-12 1TU4-A nrPDB 66 1e-11 2F7S-A nrPDB 65 2e-11 2ERY-A nrPDB 65 3e-11 2O52-A nrPDB 64 4e-11 2IEY-A nrPDB 64 4e-11 1D5C-A nrPDB 64 5e-11 2IEZ-A nrPDB 64 7e-11 5YOZ-A nrPDB 63 8e-11 5CLL-A nrPDB 63 9e-11 2N1B-A nrPDB 63 9e-11 5UWI-A nrPDB 62 1e-10 1Z0F-A nrPDB 62 2e-10 3PIR-A nrPDB 62 2e-10 2HEI-A nrPDB 62 2e-10 6IYB-A nrPDB 61 3e-10 1YVD-A nrPDB 60 5e-10 2BMD-A nrPDB 59 2e-09 3CBQ-A nrPDB 59 2e-09 5WDR-A nrPDB 58 3e-09 5XOJ-A nrPDB 57 4e-09 3WYF-A nrPDB 57 7e-09 3E5H-A nrPDB 55 2e-08 3Q85-A nrPDB 54 4e-08 3TSO-A nrPDB 54 4e-08 2GF0-A nrPDB 54 5e-08 2G3Y-A nrPDB 52 2e-07 4DJT-A nrPDB 52 2e-07 2CJW-A nrPDB 52 2e-07 6FF8-A nrPDB 51 4e-07 2NZJ-A nrPDB 50 9e-07 4CZ2-A nrPDB 49 1e-06 5XC3-A nrPDB 49 2e-06 3Q72-A nrPDB 47 4e-06 2FN4-A nrPDB 47 4e-06 3CLV-A nrPDB 45 3e-05 3C5C-A nrPDB 45 3e-05 3IHW-A nrPDB 42 1e-04 3D6T-B nrPDB 41 3e-04 1X8L-A nrPDB 40 0.001 5C1S-A nrPDB 40 0.001 2IWR-A nrPDB 36 0.014 3EC1-A nrPDB 32 0.15 2GAO-A nrPDB 32 0.22 4WNR-A nrPDB 31 0.41 3WIA-A nrPDB 31 0.42 3DPU-A nrPDB 31 0.42 1F6B-A nrPDB 30 0.49 3X1F-A nrPDB 30 0.57 1I6Q-A nrPDB 30 0.71 4NK4-A nrPDB 30 0.79 2YC4-C nrPDB 28 2.9 3H0M-B nrPDB 28 3.7 6HLU-A nrPDB 28 3.8 4R71-B nrPDB 27 4.4 3ZFC-A nrPDB 27 5.4 5A4J-A nrPDB 26 9.4 >2ATX-A nrPDB Length = 194 Score = 382 bits (981), Expect = e-107, Method: Compositional matrix adjust. Identities = 184/185 (99%), Positives = 185/185 (100%) Query: 1 MAHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLG 60 MAHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLG Sbjct: 10 MAHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLG 69 Query: 61 LYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIG 120 LYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIG Sbjct: 70 LYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIG 129 Query: 121 TQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAII 180 TQIDLRDDPKTLARLNDMKEKP+CVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAII Sbjct: 130 TQIDLRDDPKTLARLNDMKEKPICVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAII 189 Query: 181 AILTP 185 AILTP Sbjct: 190 AILTP 194 >3VHL-B nrPDB Length = 195 Score = 270 bits (689), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 124/188 (65%), Positives = 151/188 (80%) Query: 6 GALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTA 65 G +KCVVVGDGAVGK CLL+SY + FP EYVPTVFD+YAV+V +GG+ Y LGL+DTA Sbjct: 7 GMQTIKCVVVGDGAVGKNCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA 66 Query: 66 GQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDL 125 GQEDYDRLRPLSYP TDVFL+CFSVV+P+SF+NVKE+WVPE+ + P PFLL+GTQIDL Sbjct: 67 GQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDL 126 Query: 126 RDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILTP 185 RDDP T+ +L K+KP+ E +KLA+++ A YVECSALTQKGLK VFDEAI+A L P Sbjct: 127 RDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEP 186 Query: 186 KKHTVKKR 193 + +R Sbjct: 187 PEPKKSRR 194 >3TH5-A nrPDB Length = 204 Score = 248 bits (634), Expect = 9e-67, Method: Compositional matrix adjust. Identities = 115/174 (66%), Positives = 143/174 (82%) Query: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQED 69 +KCVVVGDGAVGKTCLL+SY +AFP EY+PTVFD+Y+ +V V GK LGL+DTAGQED Sbjct: 31 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQED 90 Query: 70 YDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDP 129 YDRLRPLSYP TDVFLICFS+V+PASF+NV+ +W PE++ + PN P +L+GT++DLRDD Sbjct: 91 YDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRDDK 150 Query: 130 KTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAIL 183 T+ +L + K P+ QG +AKEIGA Y+ECSALTQ+GLKTVFDEAI A+L Sbjct: 151 DTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVL 204 >3RYT-C nrPDB Length = 180 Score = 248 bits (634), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 116/180 (64%), Positives = 144/180 (80%) Query: 4 GPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYD 63 GP +KCVVVGDGAVGKTCLL+SY +AFP EY+PTVFD+Y+ +V V GK LGL+D Sbjct: 1 GPHMQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWD 60 Query: 64 TAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQI 123 TAG EDYDRLRPLSYP TDVFLICFS+V+PASF+NV+ +W PE++ + PN P +L+GT++ Sbjct: 61 TAGLEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKL 120 Query: 124 DLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAIL 183 DLRDD T+ +L + K P+ QG +AKEIGA Y+ECSALTQ+GLKTVFDEAI A+L Sbjct: 121 DLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVL 180 >2WKQ-A nrPDB Length = 332 Score = 247 bits (631), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 114/177 (64%), Positives = 143/177 (80%) Query: 9 MLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQE 68 ++KCVVVGDGAVGKTCLL+SY +AFP EY+PTVFD+Y+ +V V GK LGL+DTAG E Sbjct: 155 LIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGLE 214 Query: 69 DYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDD 128 DYDRLRPLSYP TDVFLICFS+V+PASF +V+ +W PE++ + PN P +L+GT++DLRDD Sbjct: 215 DYDRLRPLSYPQTDVFLICFSLVSPASFHHVRAKWYPEVRHHCPNTPIILVGTKLDLRDD 274 Query: 129 PKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILTP 185 T+ +L + K P+ QG +AKEIGA Y+ECSALTQ+GLKTVFDEAI A+L P Sbjct: 275 KDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVLCP 331 >2W2X-A nrPDB Length = 185 Score = 239 bits (611), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 112/180 (62%), Positives = 143/180 (79%) Query: 6 GALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTA 65 G+ +KCVVVGD AVGKTCLL+SY +AFP EY+PTVFD+Y+ +V V K LGL+DTA Sbjct: 6 GSQAIKCVVVGDVAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDSKPVNLGLWDTA 65 Query: 66 GQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDL 125 GQEDYDRLRPLSYP TDVFLICFS+V+PAS++NV+ +W PE++ + P+ P +L+GT++DL Sbjct: 66 GQEDYDRLRPLSYPQTDVFLICFSLVSPASYENVRAKWFPEVRHHCPSTPIILVGTKLDL 125 Query: 126 RDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILTP 185 RDD T+ +L + K P+ QG LAKEI + Y+ECSALTQ+GLKTVFDEAI A+L P Sbjct: 126 RDDKDTIEKLKEKKLAPITYPQGLALAKEIDSVKYLECSALTQRGLKTVFDEAIRAVLCP 185 >1RYH-A nrPDB Length = 203 Score = 238 bits (608), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 116/195 (59%), Positives = 144/195 (73%), Gaps = 19/195 (9%) Query: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQED 69 +KCVVVGDGAVGKTCLL+SY +AFP EY+PTVFD+Y+ +V V GK LGL+DTAGQED Sbjct: 6 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQED 65 Query: 70 YDRLRPLSYPMT-------------------DVFLICFSVVNPASFQNVKEEWVPELKEY 110 YDRLRPLSYP T DVFLICFS+V+PASF+NV+ +W PE++ + Sbjct: 66 YDRLRPLSYPQTVGETYGKDITSRGKDKPIADVFLICFSLVSPASFENVRAKWYPEVRHH 125 Query: 111 APNVPFLLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKG 170 PN P +L+GT++DLRDD T+ +L + K P+ QG +AKEIGA Y+ECSALTQ+G Sbjct: 126 CPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRG 185 Query: 171 LKTVFDEAIIAILTP 185 LKTVFDEAI A+L P Sbjct: 186 LKTVFDEAIRAVLCP 200 >5C2K-A nrPDB Length = 415 Score = 211 bits (538), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 101/194 (52%), Positives = 136/194 (70%), Gaps = 2/194 (1%) Query: 2 AHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGL 61 + G A+ K V+VGDGA GKTCLL+ ++ D FPE YVPTVF++Y + V GKQ L L Sbjct: 5 SSGMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELAL 64 Query: 62 YDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGT 121 +DTAGQEDYDRLRPLSYP TDV L+CFS+ +P S +N+ E+W PE+K + PNVP +L+G Sbjct: 65 WDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGN 124 Query: 122 QIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIA 181 + DLR+D T L MK++PV E+G+ +A IGA Y+ECSA T+ G++ VF+ A A Sbjct: 125 KKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRA 184 Query: 182 ILTPKKHTVKKRIG 195 L ++ KK+ G Sbjct: 185 ALQARRG--KKKSG 196 >2Q3H-A nrPDB Length = 201 Score = 211 bits (537), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 99/172 (57%), Positives = 131/172 (76%) Query: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQED 69 +KCV+VGDGAVGKT L++SY + +P EY+PT FD+++ V+V G+ L L DTAGQ++ Sbjct: 21 VKCVLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNFSAVVSVDGRPVRLQLCDTAGQDE 80 Query: 70 YDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDP 129 +D+LRPL Y TD+FL+CFSVV+P+SFQNV E+WVPE++ + P P +L+GTQ DLR+D Sbjct: 81 FDKLRPLCYTNTDIFLLCFSVVSPSSFQNVSEKWVPEIRCHCPKAPIILVGTQSDLREDV 140 Query: 130 KTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIA 181 K L L+ KEKPV E + LA+EI A Y+ECSALTQK LK VFD AI+A Sbjct: 141 KVLIELDKCKEKPVPEEAAKLLAEEIKAASYIECSALTQKNLKEVFDAAIVA 192 >2J0V-A nrPDB Length = 212 Score = 209 bits (533), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 97/206 (47%), Positives = 145/206 (70%), Gaps = 6/206 (2%) Query: 2 AHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGL 61 +H + +KCV VGDGAVGKTC+L+ Y ++ FP +Y+PTVFD+++ +V V G+ LGL Sbjct: 2 SHMSVSKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDGQIVNLGL 61 Query: 62 YDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGT 121 +DTAGQEDY RLRPLSY D+F++ FS+++ AS++NV ++W+PEL+ +APNVP +L+GT Sbjct: 62 WDTAGQEDYSRLRPLSYRGADIFVLAFSLISKASYENVLKKWMPELRRFAPNVPIVLVGT 121 Query: 122 QIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIA 181 ++DLRDD LA ++ + QG++L K+IGA Y+ECS+ TQ+ +K VFD AI Sbjct: 122 KLDLRDDKGYLADHTNV----ITSTQGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKV 177 Query: 182 ILTP--KKHTVKKRIGSRCINCCLIT 205 +L P +K ++R R C + + Sbjct: 178 VLQPPRRKEVPRRRKNHRRSGCSIAS 203 >5ZHX-e nrPDB Length = 198 Score = 208 bits (530), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 98/186 (52%), Positives = 131/186 (70%) Query: 6 GALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTA 65 A+ K V+VGDGA GKTCLL+ ++ D FPE YVPTVF++Y + V GKQ L L+DTA Sbjct: 7 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTA 66 Query: 66 GQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDL 125 GQEDYDRLRPLSYP TDV L+CFS+ +P S +N+ E+W PE+K + PNVP +L+G + DL Sbjct: 67 GQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL 126 Query: 126 RDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILTP 185 R+D T L MK++PV E+G+ +A IGA Y+ECSA T+ G++ VF+ A A L Sbjct: 127 RNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQA 186 Query: 186 KKHTVK 191 ++ K Sbjct: 187 RRGKKK 192 >3BWD-D nrPDB Length = 182 Score = 207 bits (527), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 95/177 (53%), Positives = 132/177 (74%), Gaps = 2/177 (1%) Query: 9 MLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQE 68 +KCV VGDGAVGKTCLL+SY ++ FP +YVPTVFD+++ +V V G LGL+DTAGQE Sbjct: 8 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWDTAGQE 67 Query: 69 DYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDD 128 DY+RLRPLSY DVF++ FS+++ AS++NV ++W+PELK YAP VP +L+GT++DLRDD Sbjct: 68 DYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKLDLRDD 127 Query: 129 PKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILTP 185 + ++ P+ QG++L K IGA Y+ECS+ +Q+ +K VFD AI +L P Sbjct: 128 KQFF--IDHPGAVPITTVQGEELKKLIGAPAYIECSSKSQENVKGVFDAAIRVVLQP 182 >2NTY-C nrPDB Length = 180 Score = 207 bits (527), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 93/177 (52%), Positives = 132/177 (74%), Gaps = 2/177 (1%) Query: 9 MLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQE 68 +KCV VGDGAVGKTC+L+SY ++ FP +YVPTVFD+++ +V V G LGL+DTAGQE Sbjct: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDTAGQE 65 Query: 69 DYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDD 128 DY+RLRPLSY DVF++ FS+++ AS++NV ++W+PEL+ YAP VP +L+GT++DLRDD Sbjct: 66 DYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDD 125 Query: 129 PKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILTP 185 + ++ P+ QG++L K IG+ Y+ECS+ TQ+ +K VFD AI +L P Sbjct: 126 KQFF--IDHPGAVPITTNQGEELKKLIGSPIYIECSSKTQQNVKAVFDAAIKVVLQP 180 >5JCP-B nrPDB Length = 419 Score = 206 bits (525), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 97/178 (54%), Positives = 127/178 (71%) Query: 6 GALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTA 65 A+ K V+VGDGA GKTCLL+ + D FPE YVPTVF++Y + V GKQ L L+DTA Sbjct: 240 AAIRKKLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTA 299 Query: 66 GQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDL 125 GQEDYDRLRPLSYP TDV L+CFS+ +P S +N+ E+W PE+K + PNVP +L+G + DL Sbjct: 300 GQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL 359 Query: 126 RDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAIL 183 R+D T L MK++PV E+G+ +A IGA Y+ECSA T+ G++ VF+ A A L Sbjct: 360 RNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 417 >2WBL-C nrPDB Length = 180 Score = 206 bits (524), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 97/183 (53%), Positives = 132/183 (72%), Gaps = 10/183 (5%) Query: 7 ALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAG 66 A +KCV VGDGAVGKTC+L+SY + FP +YVPTVFD+++ +V V G LGL+DTAG Sbjct: 4 ARFIKCVTVGDGAVGKTCMLISYTGNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAG 63 Query: 67 QEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLR 126 QEDY+RLRPLSY DVFL+ FS+++ AS++N+ ++W+PELK YAP +P +L+GT++DLR Sbjct: 64 QEDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWLPELKHYAPGIPIVLVGTKLDLR 123 Query: 127 DDPKTLARLNDMKEKP----VCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI 182 DD + L K+ P + QG++L K IGA Y+ECS+ TQ+ +K VFD AI Sbjct: 124 DDKQFL------KDHPGAASITTAQGEELRKMIGAVRYLECSSKTQQNVKAVFDTAIRVA 177 Query: 183 LTP 185 L P Sbjct: 178 LRP 180 >4MIT-A nrPDB Length = 186 Score = 202 bits (513), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 94/183 (51%), Positives = 128/183 (69%), Gaps = 2/183 (1%) Query: 1 MAHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLG 60 M+ P ++ K VVVGDGAVGKTCLL+SY+ FPE+Y+PTVFD+Y VS+T G +Q L Sbjct: 4 MSEKPTSI--KLVVVGDGAVGKTCLLISYSIRKFPEDYIPTVFDNYVVSLTAGTRQIQLA 61 Query: 61 LYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIG 120 L+DTAG E+YD+LRPLSY +FLICFSV + S+ NV +W PE+ +AP VP +L+G Sbjct: 62 LWDTAGLEEYDQLRPLSYSSASIFLICFSVTSSVSYDNVITKWHPEVIHFAPKVPIILVG 121 Query: 121 TQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAII 180 T++D R+DP + RL + + +G++L I A Y+ECSA T + LKTVFDEA+ Sbjct: 122 TKLDTRNDPAIVKRLTEQGMTVINTAKGEELKNRIKAVKYIECSAKTSENLKTVFDEAVK 181 Query: 181 AIL 183 +L Sbjct: 182 TVL 184 >2FV8-A nrPDB Length = 207 Score = 201 bits (510), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 99/187 (52%), Positives = 129/187 (68%), Gaps = 7/187 (3%) Query: 11 KCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDY 70 K VVVGDGA GKTCLL+ ++ D FPE YVPTVF++Y + V GKQ L L+DTAGQEDY Sbjct: 27 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 86 Query: 71 DRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDPK 130 DRLRPLSYP TDV L+CFSV +P S +N+ E+WVPE+K + PNVP +L+ + DLR D Sbjct: 87 DRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEH 146 Query: 131 TLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILTPKKHTV 190 L MK++PV + G+ +A I A Y+ECSA T++G++ VF+ A A L Sbjct: 147 VRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAAL------- 199 Query: 191 KKRIGSR 197 +KR GS+ Sbjct: 200 QKRYGSQ 206 >5VCU-A nrPDB Length = 208 Score = 201 bits (510), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 93/170 (54%), Positives = 123/170 (72%) Query: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQED 69 +KCVVVGDGAVGKT LL++Y++ FPE+YVPTVFD+Y ++ G + LYDTAGQED Sbjct: 12 IKCVVVGDGAVGKTALLIAYSSGCFPEDYVPTVFDNYNKNIPYGDGIVSIALYDTAGQED 71 Query: 70 YDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDP 129 YDRLRPLSYP TDVFL+CFS+ NP S +N +W ELK Y P+ P +L+GT++DL+ D Sbjct: 72 YDRLRPLSYPDTDVFLVCFSLENPNSLENCHSKWAEELKHYNPDTPIVLVGTKLDLKKDE 131 Query: 130 KTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAI 179 + + +L + K PV EQGQ++ +I AC Y+ECSA T + L F+ AI Sbjct: 132 EYVKKLKEKKISPVTTEQGQEMKDKIKACGYIECSAKTMENLTEAFNMAI 181 >4U5X-A nrPDB Length = 178 Score = 198 bits (504), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 90/175 (51%), Positives = 130/175 (74%), Gaps = 2/175 (1%) Query: 9 MLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQE 68 +KCV VGDGAVGKTC+L+ Y ++ FP +Y+PTVFD+++ +V+V G LGL+DTAG E Sbjct: 5 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSVDGSVVNLGLWDTAGLE 64 Query: 69 DYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDD 128 DY RLRPLSY DVF++ FS+++ AS++NV+++W+PEL+ +AP VP +L+GT++DLR+D Sbjct: 65 DYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFAPGVPVVLVGTKLDLRED 124 Query: 129 PKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAIL 183 LA + + EQG++L K IGA Y+ECS+ TQ+ +K VFD AI +L Sbjct: 125 RAYLA--DHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVVL 177 >5ZVP-A nrPDB Length = 181 Score = 191 bits (485), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 91/173 (52%), Positives = 122/173 (70%) Query: 11 KCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDY 70 K V+VGDGA GKTCLL+ + FPE YVPTVF++Y V V GK L L+DTAGQEDY Sbjct: 7 KLVIVGDGACGKTCLLIVNSKGTFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDY 66 Query: 71 DRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDPK 130 DRLRPLSYP + V LICF++ +P S NV+E+W+ E+ + +P +L+G + DLR DPK Sbjct: 67 DRLRPLSYPDSHVILICFAIDSPDSLDNVQEKWISEVLHFCQGLPIILVGCKKDLRHDPK 126 Query: 131 TLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAIL 183 T+ L+ +KPV EQG+++ K+IGA Y+ECSA T +G++ VF+ A A L Sbjct: 127 TIEELHKTSQKPVTPEQGEEVRKKIGAYKYLECSARTNEGVREVFEAATRAAL 179 >3A58-B nrPDB Length = 188 Score = 190 bits (483), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 90/181 (49%), Positives = 126/181 (69%) Query: 7 ALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAG 66 ++ K V+VGDGA GKTCLL+ + FPE YVPTVF++Y V V G++ L L+DTAG Sbjct: 8 SIRRKLVIVGDGACGKTCLLIVNSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAG 67 Query: 67 QEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLR 126 QEDYDRLRPLSYP ++V LICFS+ P S +NV+E+W+ E+ + VP +L+G ++DLR Sbjct: 68 QEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLR 127 Query: 127 DDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILTPK 186 +DP+T+ +L ++PV ++GQ +A +IGA Y ECSA T G++ VF+ A A L K Sbjct: 128 NDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLMGK 187 Query: 187 K 187 Sbjct: 188 S 188 >5HZH-A nrPDB Length = 332 Score = 186 bits (471), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 87/143 (60%), Positives = 109/143 (76%) Query: 43 FDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEE 102 D A + GGK LGL+DTAG EDYDRLRPLSYP TDVFLICFS+V+PASF+NV+ + Sbjct: 189 IDEAAKELGSGGKPVNLGLWDTAGLEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAK 248 Query: 103 WVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVE 162 W PE++ + PN P +L+GT++DLRDD T+ +L + K P+ QG +AKEIGA Y+E Sbjct: 249 WYPEVRHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLE 308 Query: 163 CSALTQKGLKTVFDEAIIAILTP 185 CSALTQ+GLKTVFDEAI A+L P Sbjct: 309 CSALTQRGLKTVFDEAIRAVLCP 331 Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 32/45 (71%), Positives = 39/45 (86%) Query: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGG 54 +KCVVVGDGAVGKTCLL+SY +AFP EY+PTVFD+Y+ +V V G Sbjct: 7 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDG 51 >2J1L-A nrPDB Length = 214 Score = 176 bits (445), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 82/182 (45%), Positives = 113/182 (62%) Query: 5 PGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDT 64 PG +K V+VGDG GKT LLM +A+ AFPE Y PTVF+ Y V++ V GK L ++DT Sbjct: 30 PGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDT 89 Query: 65 AGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQID 124 AGQ+DYDRLRPL YP V L+CF V +P SF N+ W PE+ + VP +++G + D Sbjct: 90 AGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTD 149 Query: 125 LRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILT 184 LR D + +L +PV +GQ++A+ +GA Y+ECSA + VF EA L+ Sbjct: 150 LRKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALS 209 Query: 185 PK 186 + Sbjct: 210 SR 211 >1M7B-A nrPDB Length = 184 Score = 162 bits (411), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 77/172 (44%), Positives = 111/172 (64%), Gaps = 1/172 (0%) Query: 11 KCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDY 70 K VVVGD GKT LL +A D FPE YVPTVF++Y S + ++ L L+DT+G Y Sbjct: 9 KIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYY 68 Query: 71 DRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDPK 130 D +RPLSYP +D LICF + P + +V ++W E++E+ PN LL+G + DLR D Sbjct: 69 DNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDVS 128 Query: 131 TLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSAL-TQKGLKTVFDEAIIA 181 TL L++ ++ PV +QG +AK+IGA Y+ECSAL ++ ++ +F A +A Sbjct: 129 TLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLA 180 >1GWN-A nrPDB Length = 205 Score = 162 bits (410), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 77/172 (44%), Positives = 111/172 (64%), Gaps = 1/172 (0%) Query: 11 KCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDY 70 K VVVGD GKT LL +A D FPE YVPTVF++Y S + ++ L L+DT+G Y Sbjct: 30 KIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYY 89 Query: 71 DRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDPK 130 D +RPLSYP +D LICF + P + +V ++W E++E+ PN LL+G + DLR D Sbjct: 90 DNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDVS 149 Query: 131 TLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSAL-TQKGLKTVFDEAIIA 181 TL L++ ++ PV +QG +AK+IGA Y+ECSAL ++ ++ +F A +A Sbjct: 150 TLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLA 201 >3REG-A nrPDB Length = 194 Score = 156 bits (394), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 75/181 (41%), Positives = 114/181 (62%), Gaps = 10/181 (5%) Query: 6 GALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTA 65 G LK VVVGDGAVGKTCLL++++ P YVPTVF++++ + ++++L L+DTA Sbjct: 20 GKKALKIVVVGDGAVGKTCLLLAFSKGEIPTAYVPTVFENFSHVMKYKNEEFILHLWDTA 79 Query: 66 GQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDL 125 GQE+YDRLRPLSY +DV L+CF+V N SF N+ +W PE+K Y +L+G ++DL Sbjct: 80 GQEEYDRLRPLSYADSDVVLLCFAVNNRTSFDNISTKWEPEIKHYIDTAKTVLVGLKVDL 139 Query: 126 RDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILTP 185 R D V ++G L +++G Y+E S++ + GL VF++++ I + Sbjct: 140 RKDG----------SDDVTKQEGDDLCQKLGCVAYIEASSVAKIGLNEVFEKSVDCIFSN 189 Query: 186 K 186 K Sbjct: 190 K 190 >2REX-B nrPDB Length = 197 Score = 134 bits (337), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 70/185 (37%), Positives = 107/185 (57%), Gaps = 3/185 (1%) Query: 2 AHGPGALMLKC--VVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLL 59 P ++ +C V+VGD GKT +L A D +PE YVPTVF++Y + ++ L Sbjct: 1 GRAPQPVVARCKLVLVGDVQCGKTAMLQVLAKDCYPETYVPTVFENYTACLETEEQRVEL 60 Query: 60 GLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLI 119 L+DT+G YD +RPL Y +D L+CF + P + + ++W E+ +Y P+ LLI Sbjct: 61 SLWDTSGSPYYDNVRPLCYSDSDAVLLCFDISRPETVDSALKKWRTEILDYCPSTRVLLI 120 Query: 120 GTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALT-QKGLKTVFDEA 178 G + DLR D TL L+ K+ P+ EQG +AK++GA Y+E SA T +K + ++F A Sbjct: 121 GCKTDLRTDLSTLMELSHQKQAPISYEQGCAIAKQLGAEIYLEGSAFTSEKSIHSIFRTA 180 Query: 179 IIAIL 183 + L Sbjct: 181 SMLCL 185 >5CM8-B nrPDB Length = 203 Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 68/215 (31%), Positives = 105/215 (48%), Gaps = 25/215 (11%) Query: 1 MAHGP--GALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYL 58 M+ P G + K ++VG G VGK+ L + + D F E+Y PT D Y V + G++ Sbjct: 3 MSKKPTAGPALHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQ 62 Query: 59 LGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKE--EWVPELKEYAPNVPF 116 + + DTAGQEDY +R + + FL FS+ + SFQ +E E + +K ++PF Sbjct: 63 IDILDTAGQEDYAAIRDNYFRSGEGFLCVFSITDDESFQATQEFREQILRVKN-DESIPF 121 Query: 117 LLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFD 176 LL+G + D LND ++ P+ Q L + A YVE SA T++ + VF Sbjct: 122 LLVGNKCD----------LNDKRKVPLSECQ---LRAQQWAVPYVETSAKTRENVDKVFF 168 Query: 177 EAIIAILTPKKH-------TVKKRIGSRCINCCLI 204 + + I + K K R R + C L+ Sbjct: 169 DLMREIRSRKTEDSKATSGRAKDRCKKRRLKCTLL 203 >4M8N-E nrPDB Length = 199 Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 54/174 (31%), Positives = 90/174 (51%), Gaps = 15/174 (8%) Query: 4 GPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYD 63 GP K VV+G G VGK+ L + + F E+Y PT+ D Y V V +Q +L + D Sbjct: 1 GPHMREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILD 60 Query: 64 TAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKE--EWVPELKEYAPNVPFLLIGT 121 TAG E + +R L F + +S+ ++F ++++ E + +K+ +VP +L+G Sbjct: 61 TAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKD-TDDVPMILVGN 119 Query: 122 QIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVF 175 + DL D E+ V EQGQ LA++ C ++E SA ++ + +F Sbjct: 120 KCDLED------------ERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIF 161 >1YZU-A nrPDB Length = 170 Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 53/174 (30%), Positives = 95/174 (54%), Gaps = 16/174 (9%) Query: 4 GPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVS-VTVGGKQYLLGLY 62 G A K V++G+G VGKT L++ Y + F ++++ T+ + + +GGK+ L ++ Sbjct: 1 GSRAYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIW 60 Query: 63 DTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPN-VPFLLIGT 121 DTAGQE + L P+ Y ++ ++ + + + SFQ VK WV EL++ N + ++G Sbjct: 61 DTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVK-NWVKELRKMLGNEICLCIVGN 119 Query: 122 QIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVF 175 +IDL KE+ V +++ + A+ +GA Y SA KG++ +F Sbjct: 120 KIDLE------------KERHVSIQEAESYAESVGAKHY-HTSAKQNKGIEELF 160 >2KE5-A nrPDB Length = 174 Score = 89.7 bits (221), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 57/178 (32%), Positives = 88/178 (49%), Gaps = 15/178 (8%) Query: 11 KCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDY 70 K ++VG G VGK+ L + + D F E+Y PT D Y V + G++ + + DTAG EDY Sbjct: 5 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGLEDY 64 Query: 71 DRLRPLSYPMTDVFLICFSVVNPASFQNVKE--EWVPELKEYAPNVPFLLIGTQIDLRDD 128 +R + + FL+ FS+ SF E E + +K +P L++G + DL + Sbjct: 65 AAIRDNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKAEEDKIPLLVVGNKSDLEE- 123 Query: 129 PKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILTPK 186 + V VE+ + A+E G YVE SA T+ + VF + + I T K Sbjct: 124 -----------RRQVPVEEARSKAEEWG-VQYVETSAKTRANVDKVFFDLMREIRTKK 169 >1ZC4-A nrPDB Length = 175 Score = 89.7 bits (221), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 57/167 (34%), Positives = 85/167 (50%), Gaps = 16/167 (9%) Query: 11 KCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDY 70 K ++VG G VGK+ L + + D F E+Y PT D Y V + G++ + + DTAG EDY Sbjct: 8 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGLEDY 67 Query: 71 DRLRPLSYPMTDVFLICFSVVNPASFQNVKE--EWVPELKEYAPNVPFLLIGTQIDLRDD 128 +R + + FL FS+ SF + E + +KE NVPFLL+G + DL D Sbjct: 68 AAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRVKE-DENVPFLLVGNKSDLED- 125 Query: 129 PKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVF 175 ++ V VE+ + A++ YVE SA T+ + VF Sbjct: 126 -----------KRQVSVEEAKNRAEQWN-VNYVETSAKTRANVDKVF 160 >4RKF-A nrPDB Length = 190 Score = 87.0 bits (214), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 55/180 (30%), Positives = 94/180 (52%), Gaps = 17/180 (9%) Query: 9 MLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHYAVSVTVGGKQYLLGLYDTAGQ 67 M K +++G+ +VGKT L YA+D+F +V TV D +V K+ L ++DTAG Sbjct: 23 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGL 82 Query: 68 EDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIGTQIDLR 126 E Y + Y F++ + V N SF +V ++WV ++K Y+ N +L+G + D+ Sbjct: 83 ERYRTITTAYYRGAMGFILMYDVTNEDSFNSV-QDWVTQIKTYSWDNAQVILVGNKCDME 141 Query: 127 DDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILTPK 186 D ++ + E+G++LA ++G + E SA +K VF E ++ I+ K Sbjct: 142 D------------QRVISFERGRQLADQLG-VEFFETSAKENVNVKAVF-ERLVDIICDK 187 >1EK0-A nrPDB Length = 170 Score = 87.0 bits (214), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 53/168 (31%), Positives = 87/168 (51%), Gaps = 13/168 (7%) Query: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVS-VTVGGKQYLLGLYDTAGQE 68 +K V++G+ AVGK+ +++ + ++ F E PT+ + VT+ ++DTAGQE Sbjct: 4 IKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQE 63 Query: 69 DYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAP-NVPFLLIGTQIDLRD 127 + L P+ Y L+ + V P SF + WV EL E A ++ L+G +ID+ Sbjct: 64 RFASLAPMYYRNAQAALVVYDVTKPQSFIKAR-HWVKELHEQASKDIIIALVGNKIDM-- 120 Query: 128 DPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVF 175 L + E+ V E+G+KLA+E G + E SA T + + VF Sbjct: 121 -------LQEGGERKVAREEGEKLAEEKG-LLFFETSAKTGENVNDVF 160 >4DXA-A nrPDB Length = 169 Score = 87.0 bits (214), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 51/167 (30%), Positives = 87/167 (52%), Gaps = 15/167 (8%) Query: 11 KCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDY 70 K VV+G VGK+ L + + F E+Y PT+ D Y V V +Q +L + DTAG E + Sbjct: 7 KLVVLGSVGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTAGTEQF 66 Query: 71 DRLRPLSYPMTDVFLICFSVVNPASFQNVKE--EWVPELKEYAPNVPFLLIGTQIDLRDD 128 +R L F + +S+ ++F ++++ E + +K+ +VP +L+G + DL D Sbjct: 67 TAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKD-TDDVPMILVGNKCDLED- 124 Query: 129 PKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVF 175 E+ V EQGQ LA++ C ++E SA ++ + +F Sbjct: 125 -----------ERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIF 160 >2OCY-C nrPDB Length = 170 Score = 87.0 bits (214), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 49/169 (28%), Positives = 88/169 (52%), Gaps = 17/169 (10%) Query: 9 MLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHYAVSVTVGGKQYLLGLYDTAGQ 67 ++K +++GD VGK+CLL+ + D F ++ T+ D +V + GK+ L L+DTAGQ Sbjct: 3 IMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQ 62 Query: 68 EDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPN-VPFLLIGTQIDLR 126 E + + Y ++ + V + +F N+K +W + E+A + LL+G + Sbjct: 63 ERFRTITTAYYRGAMGIILVYDVTDERTFTNIK-QWFKTVNEHANDEAQLLLVGNK---- 117 Query: 127 DDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVF 175 +DM+ + V +QG+ LAKE+G ++E SA + +F Sbjct: 118 ---------SDMETRVVTADQGEALAKELG-IPFIESSAKNDDNVNEIF 156 >3CPH-A nrPDB Length = 213 Score = 86.7 bits (213), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 49/169 (28%), Positives = 88/169 (52%), Gaps = 17/169 (10%) Query: 9 MLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHYAVSVTVGGKQYLLGLYDTAGQ 67 ++K +++GD VGK+CLL+ + D F ++ T+ D +V + GK+ L L+DTAGQ Sbjct: 20 IMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQ 79 Query: 68 EDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPN-VPFLLIGTQIDLR 126 E + + Y ++ + V + +F N+K +W + E+A + LL+G + Sbjct: 80 ERFRTITTAYYRGAMGIILVYDVTDERTFTNIK-QWFKTVNEHANDEAQLLLVGNK---- 134 Query: 127 DDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVF 175 +DM+ + V +QG+ LAKE+G ++E SA + +F Sbjct: 135 ---------SDMETRVVTADQGEALAKELG-IPFIESSAKNDDNVNEIF 173 >3RAB-A nrPDB Length = 169 Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 53/176 (30%), Positives = 88/176 (50%), Gaps = 16/176 (9%) Query: 9 MLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHYAVSVTVGGKQYLLGLYDTAGQ 67 M K +++G+ +VGKT L YA+D+F +V TV D ++ K+ L ++DTAGQ Sbjct: 5 MFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQ 64 Query: 68 EDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIGTQIDLR 126 E Y + Y F++ + + N SF N ++W ++K Y+ N LL+G + D+ Sbjct: 65 ERYRTITTAYYRGAMGFILMYDITNEESF-NAVQDWSTQIKTYSWDNAQVLLVGNKCDME 123 Query: 127 DDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI 182 D E+ V E+G++LA +G + E SA +K F+ + I Sbjct: 124 D------------ERVVSSERGRQLADHLG-FEFFEASAKDNINVKQTFERLVDVI 166 >2GF9-A nrPDB Length = 189 Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 56/176 (31%), Positives = 89/176 (50%), Gaps = 16/176 (9%) Query: 9 MLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHYAVSVTVGGKQYLLGLYDTAGQ 67 M K +++G+ +VGKT L YA+D+F +V TV D +V K+ L ++DTAGQ Sbjct: 22 MFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQ 81 Query: 68 EDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIGTQIDLR 126 E Y + Y FL+ + + N SF V ++W ++K Y+ N +L+G + DL Sbjct: 82 ERYRTITTAYYRGAMGFLLMYDIANQESFAAV-QDWATQIKTYSWDNAQVILVGNKCDLE 140 Query: 127 DDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI 182 D E+ V E G++LA ++G + E SA +K VF+ + I Sbjct: 141 D------------ERVVPAEDGRRLADDLG-FEFFEASAKENINVKQVFERLVDVI 183 >2RHD-A nrPDB Length = 175 Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 50/169 (29%), Positives = 89/169 (52%), Gaps = 16/169 (9%) Query: 9 MLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHYAVSVTVGGKQYLLGLYDTAGQ 67 + K +++GD VGK+CLL+ +A+D + + Y+ T+ D ++++ K L ++DTAGQ Sbjct: 9 LFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTISLENKTVKLQIWDTAGQ 68 Query: 68 EDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIGTQIDLR 126 E + + Y +I + V + SF NVK +W+ E+ YA NV LL+G + DL Sbjct: 69 ERFRTITSSYYRGAHGIIIVYDVTDRDSFDNVK-QWIQEIDRYAMENVNKLLVGNKCDL- 126 Query: 127 DDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVF 175 + ++ V ++G++LA G ++E SA ++ F Sbjct: 127 -----------VSKRVVTSDEGRELADSHG-IKFIETSAKNAYNVEQAF 163 >2G6B-A nrPDB Length = 180 Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 56/161 (34%), Positives = 84/161 (52%), Gaps = 17/161 (10%) Query: 10 LKCVVVGDGAVGKTCLLMSYANDAF-PEEYVPTV-FDHYAVSVTVGGKQYLLGLYDTAGQ 67 K ++VGD VGKTCLL+ + + AF ++ TV D + V G + L ++DTAGQ Sbjct: 11 FKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAGQ 70 Query: 68 EDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAP-NVPFLLIGTQIDLR 126 E + + Y L+ + V N ASF N+ + W+ E+ EYA +V +L+G ++D Sbjct: 71 ERFRSVTHAYYRDAHALLLLYDVTNKASFDNI-QAWLTEIHEYAQHDVALMLLGNKVD-- 127 Query: 127 DDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALT 167 E+ V E G+KLAKE G ++E SA T Sbjct: 128 ----------SAHERVVKREDGEKLAKEYG-LPFMETSAKT 157 >2OCB-A nrPDB Length = 180 Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 57/192 (29%), Positives = 92/192 (47%), Gaps = 21/192 (10%) Query: 4 GPG-ALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHYAVSVTVGGKQYLLGL 61 G G +L+LK +++GDG VGK+ L+ Y + F + T+ + + V G+ L + Sbjct: 1 GSGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQI 60 Query: 62 YDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-----PNVPF 116 +DTAGQE + LR Y D L+ FSV + SF+N+ W E YA + PF Sbjct: 61 WDTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLG-NWQKEFIYYADVKDPEHFPF 119 Query: 117 LLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFD 176 +++G ++D D + V E+ Q E G Y+E SA + F+ Sbjct: 120 VVLGNKVDKED-------------RQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFE 166 Query: 177 EAIIAILTPKKH 188 EA+ +L ++ Sbjct: 167 EAVRQVLAVEEQ 178 >3DZ8-A nrPDB Length = 191 Score = 84.3 bits (207), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 54/182 (29%), Positives = 90/182 (49%), Gaps = 16/182 (8%) Query: 3 HGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHYAVSVTVGGKQYLLGL 61 G M K +++G+ +VGKT L YA+D F +V TV D +V K+ L + Sbjct: 17 QGNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQI 76 Query: 62 YDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIG 120 +DTAGQE Y + Y F++ + + N SF N ++W ++K Y+ N +L+G Sbjct: 77 WDTAGQERYRTITTAYYRGAMGFILMYDITNEESF-NAVQDWATQIKTYSWDNAQVILVG 135 Query: 121 TQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAII 180 + D+ + E+ V E+GQ LA+++G + E SA ++ F+ + Sbjct: 136 NKCDMEE------------ERVVPTEKGQLLAEQLG-FDFFEASAKENISVRQAFERLVD 182 Query: 181 AI 182 AI Sbjct: 183 AI 184 >4LHX-A nrPDB Length = 186 Score = 84.0 bits (206), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 46/169 (27%), Positives = 89/169 (52%), Gaps = 16/169 (9%) Query: 9 MLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHYAVSVTVGGKQYLLGLYDTAGQ 67 + K +++GD VGKTC+L ++ DAF ++ T+ D ++ + GK+ L ++DTAGQ Sbjct: 10 LFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQ 69 Query: 68 EDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAP-NVPFLLIGTQIDLR 126 E + + Y ++ + + N SF N++ W+ ++E+A +V +++G + D+ Sbjct: 70 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIR-NWIRNIEEHASADVEKMILGNKCDVN 128 Query: 127 DDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVF 175 D ++ V E+G+KLA + G ++E SA ++ F Sbjct: 129 D------------KRQVSKERGEKLALDYG-IKFMETSAKANINVENAF 164 >5SZI-A nrPDB Length = 209 Score = 84.0 bits (206), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 46/169 (27%), Positives = 89/169 (52%), Gaps = 16/169 (9%) Query: 9 MLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHYAVSVTVGGKQYLLGLYDTAGQ 67 + K +++GD VGKTC+L ++ DAF ++ T+ D ++ + GK+ L ++DTAGQ Sbjct: 10 LFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQ 69 Query: 68 EDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAP-NVPFLLIGTQIDLR 126 E + + Y ++ + + N SF N++ W+ ++E+A +V +++G + D+ Sbjct: 70 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIR-NWIRNIEEHASADVEKMILGNKCDVN 128 Query: 127 DDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVF 175 D ++ V E+G+KLA + G ++E SA ++ F Sbjct: 129 D------------KRQVSKERGEKLALDYG-IKFMETSAKANINVENAF 164 >1WMS-A nrPDB Length = 177 Score = 83.2 bits (204), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 20/184 (10%) Query: 9 MLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHYAVSVTVGGKQYLLGLYDTAGQ 67 + K +++GDG VGK+ L+ Y + F + T+ + + V G + ++DTAGQ Sbjct: 7 LFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQ 66 Query: 68 EDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-----PNVPFLLIGTQ 122 E + LR Y +D L+ FSV + SFQN+ W E YA + PF+++G + Sbjct: 67 ERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLS-NWKKEFIYYADVKEPESFPFVILGNK 125 Query: 123 IDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI 182 ID+ E+ V E+ Q ++ G Y E SA + F+EA+ + Sbjct: 126 IDI-------------SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRV 172 Query: 183 LTPK 186 L + Sbjct: 173 LATE 176 >4QXA-A nrPDB Length = 208 Score = 83.2 bits (204), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 57/195 (29%), Positives = 90/195 (46%), Gaps = 21/195 (10%) Query: 1 MAHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHYAVSVTVGGKQYLL 59 M G +L K +++GDG VGK+ L+ Y + F + T+ + + V G + Sbjct: 1 MMAGKSSL-FKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTM 59 Query: 60 GLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-----PNV 114 ++DTAG E + LR Y +D L+ FSV + SFQN+ W E YA + Sbjct: 60 QIWDTAGLERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLS-NWKKEFIYYADVKEPESF 118 Query: 115 PFLLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTV 174 PF+++G + D+ KE+ V E+ Q K+ G Y E SA + Sbjct: 119 PFVILGNKTDI-------------KERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAA 165 Query: 175 FDEAIIAILTPKKHT 189 F+EA+ IL + + Sbjct: 166 FEEAVRRILATEDRS 180 >3L0I-B nrPDB Length = 199 Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 42/119 (35%), Positives = 69/119 (57%), Gaps = 3/119 (2%) Query: 9 MLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHYAVSVTVGGKQYLLGLYDTAGQ 67 + K +++GD VGK+CLL+ +A+D + E Y+ T+ D ++ + GK L ++DTAGQ Sbjct: 33 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 92 Query: 68 EDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAP-NVPFLLIGTQIDL 125 E + + Y ++ + V + SF NVK +W+ E+ YA NV LL+G + DL Sbjct: 93 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVK-QWLQEIDRYASENVNKLLVGNKCDL 150 >1ZBD-A nrPDB Length = 203 Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 52/176 (29%), Positives = 87/176 (49%), Gaps = 16/176 (9%) Query: 9 MLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHYAVSVTVGGKQYLLGLYDTAGQ 67 M K +++G+ +VGKT L YA+D+F +V TV D ++ K+ L ++DTAG Sbjct: 8 MFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGL 67 Query: 68 EDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIGTQIDLR 126 E Y + Y F++ + + N SF N ++W ++K Y+ N LL+G + D+ Sbjct: 68 ERYRTITTAYYRGAMGFILMYDITNEESF-NAVQDWSTQIKTYSWDNAQVLLVGNKCDME 126 Query: 127 DDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI 182 D E+ V E+G++LA +G + E SA +K F+ + I Sbjct: 127 D------------ERVVSSERGRQLADHLG-FEFFEASAKDNINVKQTFERLVDVI 169 >2WWX-A nrPDB Length = 175 Score = 82.0 bits (201), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 42/119 (35%), Positives = 69/119 (57%), Gaps = 3/119 (2%) Query: 9 MLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHYAVSVTVGGKQYLLGLYDTAGQ 67 + K +++GD VGK+CLL+ +A+D + E Y+ T+ D ++ + GK L ++DTAGQ Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67 Query: 68 EDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAP-NVPFLLIGTQIDL 125 E + + Y ++ + V + SF NVK +W+ E+ YA NV LL+G + DL Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVK-QWLQEIDRYASENVNKLLVGIKCDL 125 >5LPN-A nrPDB Length = 177 Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 49/177 (27%), Positives = 92/177 (51%), Gaps = 16/177 (9%) Query: 1 MAHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHYAVSVTVGGKQYLL 59 MA L+ K +++GD VGKTC+L +++DAF ++ T+ D +V + GK+ L Sbjct: 3 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 62 Query: 60 GLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLL 118 ++DTAGQE + + Y ++ + + N SF+N+ +W+ + E+A +V +L Sbjct: 63 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENI-SKWLRNIDEHANEDVERML 121 Query: 119 IGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVF 175 +G + D+ D ++ V +G+++A+E G + E SA ++ F Sbjct: 122 LGNKCDMDD------------KRVVPKGKGEQIAREHG-IRFFETSAKANINIEKAF 165 >4KLZ-A nrPDB Length = 173 Score = 80.9 bits (198), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 49/179 (27%), Positives = 91/179 (50%), Gaps = 16/179 (8%) Query: 11 KCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDY 70 K V++G G VGK+ + M + + FPE++ PT+ D Y + + + + L + DTAGQ ++ Sbjct: 7 KLVMLGAGGVGKSAMTMQFISHRFPEDHDPTIEDAYKIRIRIDDEPANLDILDTAGQAEF 66 Query: 71 DRLRPLSYPMTDVFLICFSVVNPASFQNVKE--EWVPELKEYAPNVPFLLIGTQIDLRDD 128 +R + F+IC+S+ + SF V+E + + ++ + P +L+G + DL+ Sbjct: 67 TAMRDQYMRAGEGFIICYSITDRRSFHEVREFKQLIYRVRR-TDDTPVVLVGNKSDLK-- 123 Query: 129 PKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILTPKK 187 + + V E+G LA+E +C + E SA + + VF + I +K Sbjct: 124 ----------QLRQVTKEEGLALAREF-SCPFFETSAAYRYYIDDVFHALVREIRRKEK 171 >6O62-A nrPDB Length = 184 Score = 80.9 bits (198), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 51/183 (27%), Positives = 94/183 (51%), Gaps = 18/183 (9%) Query: 8 LMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHYAVSVTVGGKQYLLGLYDTAG 66 +++K ++VGD VGK+CLL+ + D F ++ T+ D ++ GK+ L ++DTAG Sbjct: 13 MIMKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKRIKLQVWDTAG 72 Query: 67 QEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIGTQIDL 125 QE + + Y ++ + V + SF+NV E W + ++A + L+G + D Sbjct: 73 QERFRTITTAYYRGAMGIVLIYDVTDSRSFENV-ENWFQTVTQHANEDAQIFLVGNKCD- 130 Query: 126 RDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILTP 185 D + V EQGQ+LA ++ ++E SA + + + ++F E +A + Sbjct: 131 -----------DEVNRQVSKEQGQELAAKLN-VPFLEASAKSNENVDSIFYE--LASIIQ 176 Query: 186 KKH 188 +KH Sbjct: 177 EKH 179 >4G01-B nrPDB Length = 181 Score = 80.5 bits (197), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 57/178 (32%), Positives = 84/178 (47%), Gaps = 16/178 (8%) Query: 2 AHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHYAVSVTVGGKQYLLG 60 A G ++ K V++GD GK+ L++ + D F E T+ ++ ++ V Sbjct: 5 AAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFE 64 Query: 61 LYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLI 119 ++DTAGQE Y L P+ Y +I F V N ASF+ K +WV EL+ PN+ L Sbjct: 65 IWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAK-KWVQELQAQGNPNMVMALA 123 Query: 120 GTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDE 177 G + DL D K V E Q A+E G ++E SA T +K +F E Sbjct: 124 GNKSDLLDARK------------VTAEDAQTYAQENG-LFFMETSAKTATNVKEIFYE 168 >4FMC-F nrPDB Length = 117 Score = 80.5 bits (197), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 41/115 (35%), Positives = 67/115 (58%), Gaps = 3/115 (2%) Query: 13 VVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHYAVSVTVGGKQYLLGLYDTAGQEDYD 71 +++GD VGK+CLL+ +A+D + E Y+ T+ D ++ + GK L ++DTAGQE + Sbjct: 2 LLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFR 61 Query: 72 RLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAP-NVPFLLIGTQIDL 125 + Y ++ + V + SF NVK +W+ E+ YA NV LL+G + DL Sbjct: 62 TITSSYYRGAHGIIVVYDVTDQESFNNVK-QWLQEIDRYASENVNKLLVGNKCDL 115 >5SZJ-A nrPDB Length = 202 Score = 80.5 bits (197), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 49/177 (27%), Positives = 92/177 (51%), Gaps = 16/177 (9%) Query: 1 MAHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHYAVSVTVGGKQYLL 59 MA L+ K +++GD VGKTC+L +++DAF ++ T+ D +V + GK+ L Sbjct: 3 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 62 Query: 60 GLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLL 118 ++DTAGQE + + Y ++ + + N SF+N+ +W+ + E+A +V +L Sbjct: 63 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENI-SKWLRNIDEHANEDVERML 121 Query: 119 IGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVF 175 +G + D+ D ++ V +G+++A+E G + E SA ++ F Sbjct: 122 LGNKCDMDD------------KRVVPKGKGEQIAREHG-IRFFETSAKANINIEKAF 165 >5SZH-B nrPDB Length = 203 Score = 80.5 bits (197), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 41/119 (34%), Positives = 69/119 (57%), Gaps = 3/119 (2%) Query: 9 MLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHYAVSVTVGGKQYLLGLYDTAGQ 67 + K +++GD VGK+CLL+ +A+D + E Y+ T+ D ++ + GK L ++DTAGQ Sbjct: 10 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 69 Query: 68 EDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAP-NVPFLLIGTQIDL 125 E + + Y ++ + V + S+ NVK +W+ E+ YA NV LL+G + DL Sbjct: 70 ERFRTITSSYYRGAHGIIVVYDVTDQESYANVK-QWLQEIDRYASENVNKLLVGNKSDL 127 >2FFQ-A nrPDB Length = 171 Score = 80.1 bits (196), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 49/176 (27%), Positives = 91/176 (51%), Gaps = 16/176 (9%) Query: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHYAVSVTVGGKQYLLGLYDTAGQE 68 K V +G+ +VGKT L+ + D+F Y T+ D + ++ + + L L+DTAGQE Sbjct: 3 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 62 Query: 69 DYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELK-EYAPNVPFLLIGTQIDLRD 127 + L P + V ++ + + N SFQ +W+ +++ E +V +L+G + DL D Sbjct: 63 RFRSLIPSYIRDSTVAVVVYDITNLNSFQQT-SKWIDDVRTERGSDVIIMLVGNKTDLAD 121 Query: 128 DPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAIL 183 ++ + +E+G++ AKE+ + ++E SA T +K +F A+L Sbjct: 122 ------------KRQITIEEGEQRAKEL-SVMFIETSAKTGYNVKQLFRRVASALL 164 >4PHF-A nrPDB Length = 184 Score = 79.7 bits (195), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 54/176 (30%), Positives = 85/176 (48%), Gaps = 19/176 (10%) Query: 9 MLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHYAVSVTVGG-KQYLLGLYDTAG 66 +LK +++GD VGKT L+ Y ND + +Y T+ D VTV G K + ++DTAG Sbjct: 10 ILKVIILGDSGVGKTSLMHRYVNDKYSCQYKATIGADFLTKEVTVDGDKVATMQVWDTAG 69 Query: 67 QEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-----PNVPFLLIGT 121 QE + L Y D ++ + V N +SF+N+K W E +A PF+++G Sbjct: 70 QERFQSLGVAFYRGADCCVLVYDVTNASSFENIK-SWRDEFLVHANVNSPETFPFVILGN 128 Query: 122 QIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDE 177 +ID + K ++ + Q+LAK +G SA + T F+E Sbjct: 129 KIDAEESKKIVSE-----------KSAQELAKSLGDIPLFLTSAKNAINVDTAFEE 173 >2HUP-A nrPDB Length = 201 Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 48/170 (28%), Positives = 87/170 (51%), Gaps = 15/170 (8%) Query: 8 LMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHYAVSVTVGGKQYLLGLYDTAG 66 + K V+VGD +VGKTC++ + AF E T+ D ++ + GK+ L ++DTAG Sbjct: 28 FLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAG 87 Query: 67 QEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIGTQIDL 125 QE + + Y + ++ + + +SF +V W+ ++++YA N+ LLIG + D Sbjct: 88 QERFRTITQSYYRSANGAILAYDITKRSSFLSVP-HWIEDVRKYAGSNIVQLLIGNKSD- 145 Query: 126 RDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVF 175 L++++E V + + Q LA+ C +E SA ++ F Sbjct: 146 ---------LSELRE--VSLAEAQSLAEHYDILCAIETSAKDSSNVEEAF 184 >3CUE-F nrPDB Length = 206 Score = 77.0 bits (188), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 39/121 (32%), Positives = 69/121 (57%), Gaps = 3/121 (2%) Query: 9 MLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHYAVSVTVGGKQYLLGLYDTAGQ 67 + K +++G+ VGK+CLL+ +++D + +Y+ T+ D +V + GK L ++DTAGQ Sbjct: 8 LFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQ 67 Query: 68 EDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPF-LLIGTQIDLR 126 E + + Y + +I + V + SF VK W+ E+ YA + LL+G + DL+ Sbjct: 68 ERFRTITSSYYRGSHGIIIVYDVTDQESFNGVK-MWLQEIDRYATSTVLKLLVGNKCDLK 126 Query: 127 D 127 D Sbjct: 127 D 127 >2GIL-A nrPDB Length = 162 Score = 77.0 bits (188), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 48/175 (27%), Positives = 88/175 (50%), Gaps = 16/175 (9%) Query: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHYAVSVTVGGKQYLLGLYDTAGQE 68 K V +G+ +VGKT L+ + D+F Y T+ D + ++ + + L L+DTAGQE Sbjct: 2 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 61 Query: 69 DYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELK-EYAPNVPFLLIGTQIDLRD 127 + L P + V ++ + + N SFQ +W+ +++ E +V +L+G + DL D Sbjct: 62 RFRSLIPSYIRDSTVAVVVYDITNVNSFQQTT-KWIDDVRTERGSDVIIMLVGNKTDLAD 120 Query: 128 DPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI 182 ++ V +E+G++ AKE+ ++E SA +K +F A+ Sbjct: 121 ------------KRQVSIEEGERKAKELN-VMFIETSAKAGYNVKQLFRRVAAAL 162 >2F9L-A nrPDB Length = 199 Score = 76.6 bits (187), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 57/193 (29%), Positives = 92/193 (47%), Gaps = 21/193 (10%) Query: 9 MLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAV-SVTVGGKQYLLGLYDTAGQ 67 + K V++GD VGK+ LL + + F E T+ +A S+ V GK ++DTAGQ Sbjct: 5 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 64 Query: 68 EDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIGTQIDLR 126 E Y R+ Y L+ + + +++NV E W+ EL+++A N+ +L+G + DLR Sbjct: 65 ERYRRITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHADSNIVIMLVGNKSDLR 123 Query: 127 DDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILTPK 186 + V ++ + A E ++E SAL T +EA ILT Sbjct: 124 ------------HLRAVPTDEARAFA-EKNNLSFIETSALDS----TNVEEAFKNILTEI 166 Query: 187 KHTV-KKRIGSRC 198 V +K+I R Sbjct: 167 YRIVSQKQIADRA 179 >6IF2-B nrPDB Length = 186 Score = 76.6 bits (187), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 54/199 (27%), Positives = 96/199 (48%), Gaps = 23/199 (11%) Query: 4 GPGA--------LMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHYAVSVTVGG 54 GPG+ + K +++GD VGK+ LL+ +A++ F Y+ T+ D +V + G Sbjct: 1 GPGSEFMARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEING 60 Query: 55 KQYLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNV 114 ++ L ++DTAG E + + Y T ++ + V + SF NVK W+ E+ + +V Sbjct: 61 EKVKLQIWDTAGLERFRTITSTYYRGTHGVIVVYDVTSAESFVNVK-RWLHEINQNCDDV 119 Query: 115 PFLLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTV 174 +L+G + DDP + K V E K A ++G + E SA ++ + Sbjct: 120 CRILVGNK---NDDP---------ERKVVETEDAYKFAGQMGIQLF-ETSAKENVNVEEM 166 Query: 175 FDEAIIAILTPKKHTVKKR 193 F+ +L KK + K+ Sbjct: 167 FNCITELVLRAKKDNLAKQ 185 >1YZN-A nrPDB Length = 185 Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 39/121 (32%), Positives = 69/121 (57%), Gaps = 3/121 (2%) Query: 9 MLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHYAVSVTVGGKQYLLGLYDTAGQ 67 + K +++G+ VGK+CLL+ +++D + +Y+ T+ D +V + GK L ++DTAGQ Sbjct: 21 LFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQ 80 Query: 68 EDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPF-LLIGTQIDLR 126 E + + Y + +I + V + SF VK W+ E+ YA + LL+G + DL+ Sbjct: 81 ERFRTITSSYYRGSHGIIIVYDVTDQESFNGVK-MWLQEIDRYATSTVLKLLVGNKCDLK 139 Query: 127 D 127 D Sbjct: 140 D 140 >2P5S-A nrPDB Length = 199 Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 54/159 (33%), Positives = 80/159 (50%), Gaps = 14/159 (8%) Query: 11 KCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHYAVSVTVGGKQYLLGLYDTAGQED 69 K V+ GD AVGK+ LM + F E T+ D ++ V G++ +L L+DTAGQE Sbjct: 30 KIVLAGDAAVGKSSFLMRLCKNEFRENISATLGVDFQMKTLIVDGERTVLQLWDTAGQER 89 Query: 70 YDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIGTQIDLRDD 128 + + + D L+ + V SF N++ EWV +++ A VP +L+G + D+RD Sbjct: 90 FRSIAKSYFRKADGVLLLYDVTCEKSFLNIR-EWVDMIEDAAHETVPIMLVGNKADIRDT 148 Query: 129 PKTLARLNDMKEKPVCV--EQGQKLAKEIGACCYVECSA 165 T E CV G+KLA GA + E SA Sbjct: 149 AAT--------EGQKCVPGHFGEKLAMTYGA-LFCETSA 178 >5LEF-A nrPDB Length = 191 Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 53/204 (25%), Positives = 96/204 (47%), Gaps = 18/204 (8%) Query: 2 AHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHYAVSVTVGGKQYLLG 60 A G K V +G+ +VGKT L+ + D+F Y T+ D + ++ + + L Sbjct: 2 AMGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQ 61 Query: 61 LYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELK-EYAPNVPFLLI 119 L+DTAG E + L P + V ++ + + N SFQ +W+ +++ E +V +L+ Sbjct: 62 LWDTAGLERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTT-KWIDDVRTERGSDVIIMLV 120 Query: 120 GTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAI 179 G + DL D ++ V +E+G++ AKE+ ++E SA +K +F Sbjct: 121 GNKTDLAD------------KRQVSIEEGERKAKELN-VMFIETSAKAGYNVKQLFRRVA 167 Query: 180 IAILTPKKHTVKKRIGSRCINCCL 203 A+ P + + R I+ L Sbjct: 168 AAL--PGMESTQDRSREDMIDIKL 189 >4KU4-A nrPDB Length = 206 Score = 74.3 bits (181), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 38/213 (17%) Query: 1 MAHGPGA--LMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYL 58 MA PGA + K ++G+G VGKT L ++ F E Y PT+ D Y + G Sbjct: 4 MALSPGAGKITDKIAMLGEGGVGKTSLTVNLTKHVFSETYDPTLEDSYRRQCVIDGIPSH 63 Query: 59 LGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKE--EWVPELK-------- 108 L + DTAGQE+Y LR ++F+I F V +SF+ + E V + K Sbjct: 64 LEILDTAGQEEYGALREQWIRQNELFVIVFDVTRRSSFEAAERLFEEVIQTKRKLDETRR 123 Query: 109 ----EYAPNVPF-----LLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACC 159 + ++PF +L+G + DL D + + V +G LAK++G C Sbjct: 124 HPGDRHPDDLPFAPSLVVLVGNKCDL-----------DTR-REVGTLEGSSLAKKLG-CG 170 Query: 160 YVECSALTQKGLKTVFDEAIIAILTPKKHTVKK 192 +VE SA L T +EA +++ + ++ Sbjct: 171 FVETSA----KLGTNVEEAFFSVVRADRRRKRE 199 >5LDD-C nrPDB Length = 207 Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 49/164 (29%), Positives = 78/164 (47%), Gaps = 18/164 (10%) Query: 8 LMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHYAVSVTVGGKQYLLGLYDTAG 66 ++LK +++GD VGKT L+ Y N F Y T+ D V V +Q + L+DTAG Sbjct: 9 VLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVMVDDRQVTMQLWDTAG 68 Query: 67 QEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPE-LKEYAP----NVPFLLIGT 121 QE + L Y D ++ F V N SF + + W E L + +P N PF+++G Sbjct: 69 QERFQSLGVAFYRGADCCVLVFDVNNAKSFDAL-DSWRDEFLIQASPRDPENFPFVVLGI 127 Query: 122 QIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSA 165 +ID+ + + ++ ++ Q + G Y E SA Sbjct: 128 KIDVEESKRVIS-----------TKRAQTFCQSKGGIPYFETSA 160 >5FBL-B nrPDB Length = 221 Score = 73.6 bits (179), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 48/176 (27%), Positives = 85/176 (48%), Gaps = 16/176 (9%) Query: 9 MLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAV-SVTVGGKQYLLGLYDTAGQ 67 + K V++GD VGK+ LL + + F E T+ +A S+ V GK ++DTAGQ Sbjct: 16 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 75 Query: 68 EDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIGTQIDLR 126 E Y + Y L+ + + +++NV E W+ EL+++A N+ +L+G + DLR Sbjct: 76 ERYRAITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHADSNIVIMLVGNKSDLR 134 Query: 127 DDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI 182 + V ++ + A++ G ++E SAL ++ F + I Sbjct: 135 ------------HLRAVPTDEARAFAEKNG-LSFIETSALDSTNVEAAFQTILTEI 177 >5WDQ-A nrPDB Length = 170 Score = 73.6 bits (179), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 47/156 (30%), Positives = 79/156 (50%), Gaps = 17/156 (10%) Query: 22 KTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPMT 81 K+ L + + F +EY PT+ D Y V + G+ LL + DTAGQE+Y +R Sbjct: 20 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 79 Query: 82 DVFLICFSVVNPASFQNVKE--EWVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLNDMK 139 + FL F++ N SF+++ + E + +K+ + +VP +L+G + D Sbjct: 80 EGFLCVFAINNTKSFEDIHQYREQIKRVKD-SDDVPMVLVGNKC-------------DAA 125 Query: 140 EKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVF 175 + V Q Q LA+ G Y+E SA T++G++ F Sbjct: 126 ARTVESRQAQDLARSYG-IPYIETSAKTRQGVEDAF 160 >1X3S-A nrPDB Length = 195 Score = 73.2 bits (178), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 49/180 (27%), Positives = 91/180 (50%), Gaps = 19/180 (10%) Query: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHYAVSVTVGGKQYLLGLYDTAGQE 68 LK +++G+ VGK+ LL+ + +D F E T+ D +++V G + L ++DTAGQE Sbjct: 16 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 75 Query: 69 DYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEY--APNVPFLLIGTQIDLR 126 + L P Y ++ + V +F + + W+ EL+ Y ++ +L+G +I Sbjct: 76 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKI--- 131 Query: 127 DDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAIL-TP 185 D + + V +G K A++ + ++E SA T G++ F+E + I+ TP Sbjct: 132 ----------DKENREVDRNEGLKFARK-HSMLFIEASAKTCDGVQCAFEELVEKIIQTP 180 >3CPJ-B nrPDB Length = 223 Score = 72.8 bits (177), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 53/177 (29%), Positives = 85/177 (48%), Gaps = 16/177 (9%) Query: 8 LMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAV-SVTVGGKQYLLGLYDTAG 66 L+ K V++GD VGK+ LL + + F + T+ +A ++ + GK+ ++DTAG Sbjct: 12 LLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIEGKRIKAQIWDTAG 71 Query: 67 QEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIGTQIDL 125 QE Y + Y LI + + +S++N W+ EL+E A NV LIG + D Sbjct: 72 QERYRAITSAYYRGAVGALIVYDISKSSSYENCN-HWLSELRENADDNVAVGLIGNKSD- 129 Query: 126 RDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI 182 LA L + V E+ + A+E + E SAL + + F+E I I Sbjct: 130 ------LAHL-----RAVPTEESKTFAQE-NQLLFTETSALNSENVDKAFEELINTI 174 >6HUF-A nrPDB Length = 182 Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 53/194 (27%), Positives = 88/194 (45%), Gaps = 17/194 (8%) Query: 2 AHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHYAVSVTVGGKQYLLG 60 + G ++K + +GD VGKT +L Y + F +++ TV D ++ K+ L Sbjct: 2 SDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKTIYRNDKRIKLQ 61 Query: 61 LYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKE--YAPNVPFLL 118 L+DTAG E + L + FL+ F + N SF NV+ W+ +LK Y+ N +L Sbjct: 62 LWDTAGLERFRSLTTAFFRDAMGFLLLFDLTNEESFLNVR-NWISQLKTHAYSENPDIVL 120 Query: 119 IGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEA 178 G + DL D E+ V + ++LA+ G Y E SA + + Sbjct: 121 CGNKSDLED------------ERVVAAAEARQLAEHYG-IPYFETSAANGTNISQAIEML 167 Query: 179 IIAILTPKKHTVKK 192 + I+ + +V K Sbjct: 168 LDLIMKRMERSVDK 181 >3CON-A nrPDB Length = 190 Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 48/156 (30%), Positives = 79/156 (50%), Gaps = 17/156 (10%) Query: 22 KTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPMT 81 K+ L + + F +EY PT+ D Y V + G+ LL + DTAGQE+Y +R Sbjct: 34 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 93 Query: 82 DVFLICFSVVNPASFQ--NVKEEWVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLNDMK 139 + FL F++ N SF N+ E + +K+ + +VP +L+G + DL Sbjct: 94 EGFLCVFAINNSKSFADINLYREQIKRVKD-SDDVPMVLVGNKCDL-------------P 139 Query: 140 EKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVF 175 + V +Q +LAK G ++E SA T++G++ F Sbjct: 140 TRTVDTKQAHELAKSYG-IPFIETSAKTRQGVEDAF 174 >5UHV-A nrPDB Length = 166 Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 48/156 (30%), Positives = 79/156 (50%), Gaps = 17/156 (10%) Query: 22 KTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPMT 81 K+ L + + F +EY PT+ D Y V + G+ LL + DTAGQE+Y +R Sbjct: 16 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 75 Query: 82 DVFLICFSVVNPASFQ--NVKEEWVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLNDMK 139 + FL F++ N SF N+ E + +K+ + +VP +L+G + DL Sbjct: 76 EGFLCVFAINNSKSFADINLYREQIKRVKD-SDDVPMVLVGNKCDL-------------P 121 Query: 140 EKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVF 175 + V +Q +LAK G ++E SA T++G++ F Sbjct: 122 TRTVDTKQAHELAKSYG-IPFIETSAKTRQGVEDAF 156 >5XR6-A nrPDB Length = 194 Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 56/187 (29%), Positives = 85/187 (45%), Gaps = 20/187 (10%) Query: 9 MLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVT-VGGKQYLLGLYDTAGQ 67 + K V++GD VGK+ LL + + F E T+ +A T V GK ++DTAGQ Sbjct: 25 LFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQ 84 Query: 68 EDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIGTQIDLR 126 E Y + Y L+ + V A+F+N W+ EL+ + PN+ +LIG + DLR Sbjct: 85 ERYRAITSAYYRGAVGALLIYDVTRHATFENAA-RWLRELRGHTDPNIVVMLIGNKCDLR 143 Query: 127 DDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILTPK 186 V E+ + A E + ++E SAL ++ F E +LT Sbjct: 144 HLV------------AVKTEEAKAFA-ERESLYFMETSALDATNVENAFTE----VLTQI 186 Query: 187 KHTVKKR 193 V KR Sbjct: 187 HKIVSKR 193 >1Z0A-A nrPDB Length = 174 Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 85/171 (49%), Gaps = 16/171 (9%) Query: 7 ALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHY-AVSVTVGGKQYLLGLYDTA 65 A + K +++GD VGK+CLL+ + + F + T+ + A +T+ GKQ L ++DTA Sbjct: 8 AYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTA 67 Query: 66 GQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIGTQID 124 GQE + + Y L+ + + +F ++ W+ + ++++ N+ +LIG + D Sbjct: 68 GQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHSNSNMVIMLIGNKSD 126 Query: 125 LRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVF 175 L + V E+G+ A+E G ++E SA T ++ F Sbjct: 127 LES------------RREVKKEEGEAFAREHG-LIFMETSAKTASNVEEAF 164 >2IL1-A nrPDB Length = 192 Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 45/181 (24%), Positives = 86/181 (47%), Gaps = 15/181 (8%) Query: 5 PGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHYAVSVTVGGKQYLLGLYD 63 P L+ +++G VGKT L+ + +D F E TV D +V + GK+ L ++D Sbjct: 22 PADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWD 81 Query: 64 TAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAP-NVPFLLIGTQ 122 TAGQE ++ + Y ++ + + +F ++ +W+ + +YA + LL+G + Sbjct: 82 TAGQERFNSITSAYYRSAKGIILVYDITKKETFDDL-PKWMKMIDKYASEDAELLLVGNK 140 Query: 123 IDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI 182 +D D + + +QG+K A++I + E SA + +F + + I Sbjct: 141 LDCETD------------REITRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDI 188 Query: 183 L 183 L Sbjct: 189 L 189 >3OES-A nrPDB Length = 201 Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 59/175 (33%), Positives = 90/175 (51%), Gaps = 18/175 (10%) Query: 11 KCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDY 70 K V++G VGKT L + F E Y PTV + Y+ VT+G ++ L L DTAGQ++Y Sbjct: 26 KVVILGYRCVGKTSLAHQFVEGEFSEGYDPTVENTYSKIVTLGKDEFHLHLVDTAGQDEY 85 Query: 71 DRLRPLSYPM-TDVFLICFSVVNPASFQNVKEEWVPELKE--YAPNVPFLLIGTQIDLRD 127 L P S+ + +++ +SV + SFQ V E +L E VP +L+G + DL Sbjct: 86 SIL-PYSFIIGVHGYVLVYSVTSLHSFQ-VIESLYQKLHEGHGKTRVPVVLVGNKADL-- 141 Query: 128 DPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI 182 P E+ V +G+KLA+ GA ++E SA + + +F + I I Sbjct: 142 SP----------EREVQAVEGKKLAESWGA-TFMESSARENQLTQGIFTKVIQEI 185 >2FG5-A nrPDB Length = 192 Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 50/174 (28%), Positives = 86/174 (49%), Gaps = 16/174 (9%) Query: 4 GPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAV-SVTVGGKQYLLGLY 62 G LK ++GD VGK+ ++ + D F PT+ + +V G + + ++ Sbjct: 18 GSAIRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIW 77 Query: 63 DTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAP-NVPFLLIGT 121 DTAGQE + L P+ Y + +I + + SF +K +WV ELKE+ P N+ + G Sbjct: 78 DTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLK-KWVKELKEHGPENIVMAIAGN 136 Query: 122 QIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVF 175 + D L+D++E P ++ ++ A+ IGA VE SA ++ +F Sbjct: 137 KCD----------LSDIREVP--LKDAKEYAESIGAIV-VETSAKNAINIEELF 177 >4UJ4-A nrPDB Length = 185 Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 49/189 (25%), Positives = 89/189 (47%), Gaps = 18/189 (9%) Query: 9 MLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAV-SVTVGGKQYLLGLYDTAGQ 67 + K V++GD VGK+ LL + + F E T+ +A S+ V GK ++DTAG Sbjct: 10 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGL 69 Query: 68 EDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIGTQIDLR 126 E Y + Y L+ + + +++NV E W+ EL+++A N+ +L+G + DLR Sbjct: 70 ERYRAITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHADSNIVIMLVGNKSDLR 128 Query: 127 DDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI--LT 184 + V ++ + A++ G ++E SAL ++ F + I + Sbjct: 129 ------------HLRAVPTDEARAFAEKNG-LSFIETSALDSTNVEAAFQTILTEIYRIV 175 Query: 185 PKKHTVKKR 193 +K +R Sbjct: 176 SQKQMSDRR 184 >4WA7-A nrPDB Length = 170 Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 17/156 (10%) Query: 22 KTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPMT 81 K+ L + + F +EY PT+ D Y V + G+ LL + DTAG E+Y +R Sbjct: 17 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGLEEYSAMRDQYMRTG 76 Query: 82 DVFLICFSVVNPASFQNVKE--EWVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLNDMK 139 + FL F++ N SF+++ E + +K+ + +VP +L+G + DL Sbjct: 77 EGFLCVFAINNTKSFEDIHHYREQIKRVKD-SEDVPMVLVGNKCDL-------------P 122 Query: 140 EKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVF 175 + V +Q Q LA+ G ++E SA T++G+ F Sbjct: 123 SRTVDTKQAQDLARSYG-IPFIETSAKTRQGVDDAF 157 >2A5J-A nrPDB Length = 191 Score = 70.5 bits (171), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 44/164 (26%), Positives = 82/164 (50%), Gaps = 16/164 (9%) Query: 6 GALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHY-AVSVTVGGKQYLLGLYDT 64 G+ + K +++GD VGK+CLL+ + + F + T+ + A V + GKQ L ++DT Sbjct: 18 GSYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDT 77 Query: 65 AGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEY-APNVPFLLIGTQI 123 AGQE + + Y L+ + + +F ++ W+ + +++ + N+ +LIG + Sbjct: 78 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLT-SWLEDARQHSSSNMVIMLIGNKS 136 Query: 124 DLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALT 167 DL + V E+G+ A+E G ++E SA T Sbjct: 137 DLES------------RRDVKREEGEAFAREHG-LIFMETSAKT 167 >3RWM-B nrPDB Length = 185 Score = 70.1 bits (170), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 56/185 (30%), Positives = 84/185 (45%), Gaps = 17/185 (9%) Query: 9 MLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAV-SVTVGGKQYLLGLYDTAGQ 67 + K V++GD VGK+ LL + D F E T+ +A ++ V K+ ++DTAG Sbjct: 10 LFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTAGL 69 Query: 68 EDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIGTQIDLR 126 E Y + Y LI + + +S++N W+ EL+E A NV LIG + D Sbjct: 70 ERYRAITSAYYRGAVGALIVYDISKSSSYENCN-HWLTELRENADDNVAVGLIGNKSD-- 126 Query: 127 DDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILTP- 185 LA L + V ++ + A E + E SAL + F E I+AI Sbjct: 127 -----LAHL-----RAVPTDEAKNFAME-NQMLFTETSALNSDNVDKAFRELIVAIFQMV 175 Query: 186 KKHTV 190 KH V Sbjct: 176 SKHQV 180 >1Z22-A nrPDB Length = 168 Score = 70.1 bits (170), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 38/121 (31%), Positives = 63/121 (52%), Gaps = 2/121 (1%) Query: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHYAVSVTVGGKQYLLGLYDTAGQE 68 +K VVVG+GAVGK+ ++ Y F ++Y T+ D + V + L L+DTAGQE Sbjct: 6 IKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQE 65 Query: 69 DYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDD 128 ++D + Y ++ FS + SF+ + W ++ ++P L+ +IDL DD Sbjct: 66 EFDAITKAYYRGAQACVLVFSTTDRESFEAIS-SWREKVVAEVGDIPTALVQNKIDLLDD 124 Query: 129 P 129 Sbjct: 125 S 125 >3BFK-A nrPDB Length = 181 Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 54/188 (28%), Positives = 90/188 (47%), Gaps = 19/188 (10%) Query: 9 MLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAV-SVTVGGKQYLLG-LYDTAG 66 + K V++GD VGK+ LL + D F E T+ +A S+ + + + ++DTAG Sbjct: 7 LFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWDTAG 66 Query: 67 QEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIGTQIDL 125 QE Y + Y L+ + + SF+N+ E+W+ EL++ A N+ LL+G + DL Sbjct: 67 QERYRAITSAYYRGAVGALLVYDITKKNSFENI-EKWLKELRDNADSNIVILLVGNKSDL 125 Query: 126 RDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI--L 183 K L +ND + +KLA ++E SAL ++ F + + I + Sbjct: 126 ----KHLRVIND--NDATQYAKKEKLA-------FIETSALEATNVELAFHQLLNEIYNV 172 Query: 184 TPKKHTVK 191 KK K Sbjct: 173 RQKKQATK 180 >4RKE-A nrPDB Length = 176 Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 86/171 (50%), Gaps = 16/171 (9%) Query: 7 ALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHY-AVSVTVGGKQYLLGLYDTA 65 A + K +++GD VGK+CLL+ + + F + T+ + A +T+ GKQ L ++DTA Sbjct: 8 AYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTA 67 Query: 66 GQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIGTQID 124 G E + + Y L+ + + +F ++ W+ + ++++ N+ +LIG + D Sbjct: 68 GLEAFRSITRSYYRGAAGALLVYDITRRETFNHLT-TWLEDARQHSNSNMVIMLIGNKSD 126 Query: 125 LRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVF 175 L D + + V E+G+ A+E G ++E SA T ++ F Sbjct: 127 L--DSR----------REVKKEEGEAFAREHG-LVFMETSARTAANVEEAF 164 >5UB8-A nrPDB Length = 222 Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 49/176 (27%), Positives = 81/176 (46%), Gaps = 16/176 (9%) Query: 9 MLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAV-SVTVGGKQYLLGLYDTAGQ 67 + K V++GD VGK+ LL + D F E T+ +A ++ + GK+ ++DTAGQ Sbjct: 15 LYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDTAGQ 74 Query: 68 EDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIGTQIDLR 126 E Y + Y LI + + S+++V W+ ELKE+A N+ L+G + DL Sbjct: 75 ERYRAITSAYYRGAVGALIVYDIAKTESYESVS-RWLKELKEHADANIIIELVGNKSDLD 133 Query: 127 DDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI 182 + V E+ + A E + E SAL+ + F + + I Sbjct: 134 ------------HLRAVPTEEAKNFAME-NNLLFTEASALSSDNVDLSFHQLLKNI 176 >2EW1-A nrPDB Length = 201 Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 37/120 (30%), Positives = 66/120 (55%), Gaps = 3/120 (2%) Query: 8 LMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHYAVSVTVGGKQYLLGLYDTAG 66 + K V++G+ VGKTCL+ + FP T+ D +V + G++ L ++DTAG Sbjct: 25 FLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAG 84 Query: 67 QEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPN-VPFLLIGTQIDL 125 QE + + Y + ++ + + SF+ + EW+ E+++YA N V +L+G +IDL Sbjct: 85 QERFRSITQSYYRSANALILTYDITCEESFRCLP-EWLREIEQYASNKVITVLVGNKIDL 143 >1Z06-A nrPDB Length = 189 Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 39/127 (30%), Positives = 68/127 (53%), Gaps = 5/127 (3%) Query: 4 GPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHYAVSVTVGGKQYLLGLY 62 G + + K +V+GD VGKTCL + FP+ T+ D +V + G++ + L+ Sbjct: 15 GSRSRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLW 74 Query: 63 DTAGQEDYDR-LRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEY--APNVPFLLI 119 DTAGQE + + + Y + + + N ASF ++ W+ E K++ A ++P +L+ Sbjct: 75 DTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSL-PAWIEECKQHLLANDIPRILV 133 Query: 120 GTQIDLR 126 G + DLR Sbjct: 134 GNKCDLR 140 >2ATV-A nrPDB Length = 196 Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 48/163 (29%), Positives = 80/163 (49%), Gaps = 17/163 (10%) Query: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQED 69 +K + G VGK+ L++ + F EY PT+ Y T+ + + + DTAGQED Sbjct: 29 VKLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQATIDDEVVSMEILDTAGQED 88 Query: 70 YDRLRPLSYPMTDVFLICFSVVNPASFQNVK--EEWVPELKEYAPNVPFLLIGTQIDLRD 127 + R + F++ + + + SF+ V + + E+K+ NV +L+G + DL Sbjct: 89 TIQ-REGHMRWGEGFVLVYDITDRGSFEEVLPLKNILDEIKK-PKNVTLILVGNKADLD- 145 Query: 128 DPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKG 170 + V E+G+KLA E+ AC + ECSA T +G Sbjct: 146 -----------HSRQVSTEEGEKLATEL-ACAFYECSACTGEG 176 >3BC1-A nrPDB Length = 195 Score = 67.0 bits (162), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 27/205 (13%) Query: 1 MAHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHYAVSV--------- 50 M+ G ++K + +GD VGKT +L Y + F +++ TV D V Sbjct: 3 MSDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDG 62 Query: 51 TVG-GKQYLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELK- 108 VG G++ L L+DTAG E + L + FL+ F + N SF NV+ W+ +L+ Sbjct: 63 AVGRGQRIHLQLWDTAGLERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVR-NWISQLQM 121 Query: 109 -EYAPNVPFLLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALT 167 Y+ N +L G + DL D ++ V E+ ++LA++ G Y E SA Sbjct: 122 HAYSENPDIVLCGNKSDLED------------QRAVKEEEARELAEKYG-IPYFETSAAN 168 Query: 168 QKGLKTVFDEAIIAILTPKKHTVKK 192 + + + I+ + +V K Sbjct: 169 GTNISHAIEMLLDLIMKRMERSVDK 193 >2ERX-A nrPDB Length = 172 Score = 66.6 bits (161), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 15/169 (8%) Query: 11 KCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDY 70 + V G G VGK+ L++ + F E Y+PTV D Y ++ L + DT G + Sbjct: 5 RVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQITDTTGSHQF 64 Query: 71 DRLRPLSYPMTDVFLICFSVVNPASFQNVKE--EWVPELKEYAPNVPFLLIGTQIDLRDD 128 ++ LS F++ +S+ + S + +K E + E+K ++P +L+G + D + Sbjct: 65 PAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVGNKCD--ES 122 Query: 129 PKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDE 177 P + V + + LA+ C ++E SA +K +F E Sbjct: 123 PS----------REVQSSEAEALAR-TWKCAFMETSAKLNHNVKELFQE 160 >2G77-B nrPDB Length = 198 Score = 66.6 bits (161), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 66/122 (54%), Gaps = 5/122 (4%) Query: 9 MLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHYAVSVTVGGKQYLLGLYDTAGQ 67 + K +V+GD VGKTCL + FP+ T+ D +V + G++ + L+DTAGQ Sbjct: 29 IFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQ 88 Query: 68 EDYDR-LRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEY--APNVPFLLIGTQID 124 E + + + Y + + + N ASF ++ W+ E K++ A ++P +L+G + D Sbjct: 89 ERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSL-PAWIEECKQHLLANDIPRILVGNKCD 147 Query: 125 LR 126 LR Sbjct: 148 LR 149 >3RAP-R nrPDB Length = 167 Score = 66.6 bits (161), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 47/160 (29%), Positives = 81/160 (50%), Gaps = 16/160 (10%) Query: 22 KTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPMT 81 K+ L + + F E+Y PT+ D Y + V +L + DTAG E + +R L Sbjct: 16 KSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNG 75 Query: 82 DVFLICFSVVNPASFQNVK--EEWVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLNDMK 139 F++ +S+VN SFQ++K + + +K Y VP +L+G ++DL Sbjct: 76 QGFILVYSLVNQQSFQDIKPMRDQIIRVKRY-EKVPVILVGNKVDL------------ES 122 Query: 140 EKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAI 179 E+ V +G+ LA+E G C ++E SA ++ + +F E + Sbjct: 123 EREVSSSEGRALAEEWG-CPFMETSAKSKTMVDELFAEIV 161 >3T5G-A nrPDB Length = 181 Score = 66.2 bits (160), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 48/178 (26%), Positives = 88/178 (49%), Gaps = 16/178 (8%) Query: 5 PGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDT 64 P + K ++G +VGK+ L + + F + Y PT+ + + +TV G++Y L L DT Sbjct: 2 PQSKSRKIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKLITVNGQEYHLQLVDT 61 Query: 65 AGQEDYDRLRPLSYPM-TDVFLICFSVVNPASFQNVKEEWVPELKEYAP-NVPFLLIGTQ 122 AGQ++Y + P +Y + + +++ +SV + SF+ +K L +P +L+G + Sbjct: 62 AGQDEYS-IFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKVQIPIMLVGNK 120 Query: 123 IDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAII 180 DL E+ + E+G+ LA+ A ++E SA + VF I+ Sbjct: 121 KDLH------------MERVISYEEGKALAESWNA-AFLESSAKENQTAVDVFRRIIL 165 >1TU4-A nrPDB Length = 171 Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 16/168 (9%) Query: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAV-SVTVGGKQYLLGLYDTAGQE 68 K V++G+ AVGK+ L++ + F E T+ + +V + ++DTAGQE Sbjct: 8 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 67 Query: 69 DYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIGTQIDLRD 127 Y L P+ Y ++ + + N SF K WV EL+ A PN+ L G + DL + Sbjct: 68 RYHSLAPMYYRGAQAAIVVYDITNEESFARAK-NWVKELQRQASPNIVIALSGNKADLAN 126 Query: 128 DPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVF 175 ++ V ++ Q A + + ++E SA T + +F Sbjct: 127 ------------KRAVDFQEAQSYADD-NSLLFMETSAKTSMNVNEIF 161 >2F7S-A nrPDB Length = 217 Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 27/197 (13%) Query: 9 MLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTV---------GGKQY-- 57 ++K + +GD VGKT L Y ++ F +++ TV + V GK + Sbjct: 25 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 84 Query: 58 LLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELK--EYAPNVP 115 L L+DTAGQE + L + FL+ F + + SF NV+ W+ +L+ Y N Sbjct: 85 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVR-NWMSQLQANAYCENPD 143 Query: 116 FLLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVF 175 +LIG + DL D ++ V Q ++LA + G Y E SA T + ++ Sbjct: 144 IVLIGNKADLPD------------QREVNERQARELADKYG-IPYFETSAATGQNVEKAV 190 Query: 176 DEAIIAILTPKKHTVKK 192 + + I+ + V+K Sbjct: 191 ETLLDLIMKRMEQCVEK 207 >2ERY-A nrPDB Length = 172 Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 76/163 (46%), Gaps = 16/163 (9%) Query: 22 KTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPMT 81 K+ L + + F +Y PT+ D Y + + L + DTAGQE++ +R Sbjct: 18 KSALTIQFIQSYFVTDYDPTIEDSYTKQCVIDDRAARLDILDTAGQEEFGAMREQYMRTG 77 Query: 82 DVFLICFSVVNPASFQNVK--EEWVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLNDMK 139 + FL+ FSV + SF+ + + + +K+ P +LIG + DL Sbjct: 78 EGFLLVFSVTDRGSFEEIYKFQRQILRVKD-RDEFPMILIGNKADLD------------H 124 Query: 140 EKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI 182 ++ V E+GQ+LA+++ Y+E SA + + F E + I Sbjct: 125 QRQVTQEEGQQLARQL-KVTYMEASAKIRMNVDQAFHELVRVI 166 >2O52-A nrPDB Length = 200 Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 44/170 (25%), Positives = 81/170 (47%), Gaps = 16/170 (9%) Query: 8 LMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSV-TVGGKQYLLGLYDTAG 66 + K +V+G GK+CLL + + F ++ T+ + V VGGK L ++DTAG Sbjct: 24 FLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAG 83 Query: 67 QEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIGTQIDL 125 QE + + Y L+ + + + ++ ++ W+ + + A PN+ +L G + DL Sbjct: 84 QERFRSVTRSYYRGAAGALLVYDITSRETYNSLA-AWLTDARTLASPNIVVILCGNKKDL 142 Query: 126 RDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVF 175 DP E+ V + + A+E ++E SALT + ++ F Sbjct: 143 --DP----------EREVTFLEASRFAQE-NELMFLETSALTGENVEEAF 179 >2IEY-A nrPDB Length = 195 Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 31/193 (16%) Query: 1 MAHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV----FDHYAVSVTVG--- 53 M G ++K + +GD VGKT L Y ++ F +++ TV + V T G Sbjct: 3 MTDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADG 62 Query: 54 --GKQY--LLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELK- 108 GK + L L+DTAG E + L + FL+ F + + SF NV+ W+ +L+ Sbjct: 63 ASGKAFKVHLQLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVR-NWMSQLQA 121 Query: 109 -EYAPNVPFLLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALT 167 Y N +LIG + DL D ++ V Q ++LA++ G Y E SA T Sbjct: 122 NAYCENPDIVLIGNKADLPD------------QREVNERQARELAEKYG-IPYFETSAAT 168 Query: 168 ----QKGLKTVFD 176 +K ++T+ D Sbjct: 169 GQNVEKSVETLLD 181 >1D5C-A nrPDB Length = 162 Score = 63.9 bits (154), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 47/167 (28%), Positives = 77/167 (46%), Gaps = 16/167 (9%) Query: 11 KCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHYAVSVTVGGKQYLLGLYDTAGQED 69 K V +G+ AVGKT ++ + D F Y T+ D + ++ + L L+DTAGQE Sbjct: 3 KLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWDTAGQER 62 Query: 70 YDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPE-LKEYAPNVPFLLIGTQIDLRDD 128 + L P + ++ + + N SF+N +W+ + L E +V L+G + DL D Sbjct: 63 FRSLIPSYIRDSAAAIVVYDITNRQSFENT-TKWIQDILNERGKDVIIALVGNKTDLGDL 121 Query: 129 PKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVF 175 K V E+G + A+E + E SA +K +F Sbjct: 122 RK------------VTYEEGMQKAQEYNTMFH-ETSAKAGHNIKVLF 155 >2IEZ-A nrPDB Length = 220 Score = 63.5 bits (153), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 31/193 (16%) Query: 1 MAHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV----FDHYAVSVTVG--- 53 M G ++K + +GD VGKT L Y ++ F +++ TV + V T G Sbjct: 3 MTDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADG 62 Query: 54 --GKQYL--LGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELK- 108 GK + L L+DTAG E + L + FL+ F + + SF NV+ W+ +L+ Sbjct: 63 ASGKAFKVHLQLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVR-NWMSQLQA 121 Query: 109 -EYAPNVPFLLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALT 167 Y N +LIG + DL D ++ V Q ++LA++ G Y E SA T Sbjct: 122 NAYCENPDIVLIGNKADLPD------------QREVNERQARELAEKYG-IPYFETSAAT 168 Query: 168 ----QKGLKTVFD 176 +K ++T+ D Sbjct: 169 GQNVEKSVETLLD 181 >5YOZ-A nrPDB Length = 177 Score = 63.2 bits (152), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 15/167 (8%) Query: 11 KCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHY-AVSVTVGGKQYLLGLYDTAGQED 69 K V++G+ GK+ + + + + F T+ + + +V + G+ ++DTAG E Sbjct: 17 KIVMLGESGAGKSSIALRFTRNEFLANQETTIGAAFLSKTVMIDGRALKYEIWDTAGLER 76 Query: 70 YDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIGTQIDLRDD 128 + L P+ Y L+ + + N S + + W+ EL+ A P++ +L+G + DL Sbjct: 77 FRSLAPIYYRGASGALVVYDITNSESLKKA-QTWIKELRANADPSLIIVLVGNKKDLGS- 134 Query: 129 PKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVF 175 + V E GQ+LA E + E SA ++ VF Sbjct: 135 -----------LRQVSFEDGQRLAAEEQLAAFYEASAKDNNNVEQVF 170 >5CLL-A nrPDB Length = 191 Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 4/128 (3%) Query: 2 AHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPT--VFDHYAVSVTVGGKQYLL 59 A G + K V+VGDG GKT + + F ++YV T V H V T G Sbjct: 3 AQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGP-IKF 61 Query: 60 GLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLI 119 ++DTAGQE + LR Y +I F V + +++NV W +L N+P +L Sbjct: 62 NVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNV-PNWHRDLVRVCENIPIVLC 120 Query: 120 GTQIDLRD 127 G ++D++D Sbjct: 121 GNKVDIKD 128 >2N1B-A nrPDB Length = 261 Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 4/128 (3%) Query: 2 AHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPT--VFDHYAVSVTVGGKQYLL 59 A G + K V+VGDG GKT + + F ++YV T V H V T G Sbjct: 44 AQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGP-IKF 102 Query: 60 GLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLI 119 ++DTAGQE + LR Y +I F V + +++NV W +L N+P +L Sbjct: 103 NVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVP-NWHRDLVRVCENIPIVLC 161 Query: 120 GTQIDLRD 127 G ++D++D Sbjct: 162 GNKVDIKD 169 >5UWI-A nrPDB Length = 237 Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 4/128 (3%) Query: 2 AHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPT--VFDHYAVSVTVGGKQYLL 59 A G + K V+VGDG GKT + + F ++YV T V H V T G Sbjct: 24 AQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGP-IKF 82 Query: 60 GLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLI 119 ++DTAGQE + LR Y +I F V + +++NV W +L N+P +L Sbjct: 83 NVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVP-NWHRDLVRVCENIPIVLC 141 Query: 120 GTQIDLRD 127 G ++D++D Sbjct: 142 GNKVDIKD 149 >1Z0F-A nrPDB Length = 179 Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 42/174 (24%), Positives = 83/174 (47%), Gaps = 16/174 (9%) Query: 7 ALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVS-VTVGGKQYLLGLYDTA 65 + + K +++GD VGK+CLL + F + T+ + + V G++ L ++DTA Sbjct: 13 SYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTA 72 Query: 66 GQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIGTQID 124 GQE + + Y L+ + + +++ ++ W+ + + PN +LIG + D Sbjct: 73 GQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLS-SWLTDARNLTNPNTVIILIGNKAD 131 Query: 125 LRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEA 178 L ++ V E+ ++ A+E G ++E SA T + ++ F EA Sbjct: 132 LE------------AQRDVTYEEAKQFAEENG-LLFLEASAKTGENVEDAFLEA 172 >3PIR-A nrPDB Length = 183 Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 41/146 (28%), Positives = 72/146 (49%), Gaps = 16/146 (10%) Query: 22 KTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPMT 81 K+ L + + F EY PT+ D Y + + +L + DTAGQE++ +R Sbjct: 31 KSALTIQFFQKIFVPEYDPTIEDSYLKHTEIDNQWAILDVLDTAGQEEFSAMREQYMRTG 90 Query: 82 DVFLICFSVVNPASFQNVK--EEWVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLNDMK 139 D FLI +SV + ASF++V + + +K+ + P +L+ ++DL M Sbjct: 91 DGFLIVYSVTDKASFEHVDRFHQLILRVKD-RESFPMILVANKVDL------------MH 137 Query: 140 EKPVCVEQGQKLAKEIGACCYVECSA 165 + V +QG+++A + Y+E SA Sbjct: 138 LRKVTRDQGKEMATKYN-IPYIETSA 162 >2HEI-A nrPDB Length = 179 Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 16/168 (9%) Query: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAV-SVTVGGKQYLLGLYDTAGQE 68 K V++G+ AVGK+ L++ + F E T+ + SV + ++DTAGQE Sbjct: 9 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQE 68 Query: 69 DYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIGTQIDLRD 127 Y L P+ Y ++ + + N +F K WV EL+ A P++ L G + DL + Sbjct: 69 RYHSLAPMYYRGAQAAIVVYDITNQETFARAK-TWVKELQRQASPSIVIALAGNKADLAN 127 Query: 128 DPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVF 175 ++ V E+ Q A + + ++E SA T + +F Sbjct: 128 ------------KRMVEYEEAQAYADD-NSLLFMETSAKTAMNVNDLF 162 >6IYB-A nrPDB Length = 199 Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 8/126 (6%) Query: 8 LMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHYAVSVTVGGKQYLLGLYDTAG 66 ++LK +++GD VGKT L+ Y N F +Y T+ D V V + + ++DTAG Sbjct: 12 VLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAG 71 Query: 67 QEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPE-LKEYAP----NVPFLLIGT 121 E + Y D ++ F V P +F+ + + W E L + +P N PF+++G Sbjct: 72 LERFQSGVAF-YRGADCCVLVFDVTAPNTFKTL-DSWRDEFLIQASPRDPENFPFVVLGN 129 Query: 122 QIDLRD 127 +IDL + Sbjct: 130 KIDLEN 135 >1YVD-A nrPDB Length = 169 Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 34/127 (26%), Positives = 65/127 (51%), Gaps = 3/127 (2%) Query: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAV-SVTVGGKQYLLGLYDTAGQE 68 LK ++GD VGK+ ++ + D+F PT+ + +V + + ++DTAGQE Sbjct: 6 LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65 Query: 69 DYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIGTQIDLRD 127 + L P+ Y + +I + + +F +K WV EL+++ P++ + G + DL D Sbjct: 66 RFRALAPMYYRGSAAAIIVYDITKEETFSTLK-NWVRELRQHGPPSIVVAIAGNKCDLTD 124 Query: 128 DPKTLAR 134 + + R Sbjct: 125 VREVMER 131 >2BMD-A nrPDB Length = 186 Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 41/170 (24%), Positives = 77/170 (45%), Gaps = 16/170 (9%) Query: 8 LMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVS-VTVGGKQYLLGLYDTAG 66 + K +V+G+ GK+CLL + F ++ T+ + + VGGK L ++DTAG Sbjct: 9 FLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAG 68 Query: 67 QEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAP-NVPFLLIGTQIDL 125 QE + + Y L+ + + + ++ N W+ + + A N+ +L G + DL Sbjct: 69 QERFRSVTRSYYRGAAGALLVYDITSRETY-NALTNWLTDARMLASQNIVIILCGNKKDL 127 Query: 126 RDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVF 175 D + V + + A+E ++E SALT + ++ F Sbjct: 128 DAD------------REVTFLEASRFAQE-NELMFLETSALTGENVEEAF 164 >3CBQ-A nrPDB Length = 195 Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 50/180 (27%), Positives = 83/180 (46%), Gaps = 22/180 (12%) Query: 9 MLKCVVVGDGAVGKTCLLMSYAN---DAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTA 65 + K ++VG+ VGK+ L ++ D+ E P D Y + V ++ L +YD Sbjct: 23 IFKVMLVGESGVGKSTLAGTFGGLQGDSAHEPENPE--DTYERRIMVDKEEVTLVVYDIW 80 Query: 66 GQEDYDR-LRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAP--NVPFLLIGTQ 122 Q D LR D FLI FSV + SF V E + L+ P ++P +L+G + Sbjct: 81 EQGDAGGWLRDHCLQTGDAFLIVFSVTDRRSFSKVPETLL-RLRAGRPHHDLPVILVGNK 139 Query: 123 IDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI 182 DL + + V +E+G+ LA + +C ++E SA + +F+ A+ I Sbjct: 140 SDL------------ARSREVSLEEGRHLAGTL-SCKHIETSAALHHNTRELFEGAVRQI 186 >5WDR-A nrPDB Length = 171 Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 16/156 (10%) Query: 22 KTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPMT 81 K+ L + F EY PT+ D Y V++ + LL + DTAGQEDY +R Sbjct: 20 KSALTIQLIQQHFVTEYDPTIEDSYRKHVSIDDEACLLDILDTAGQEDYSAMRDQYMRTG 79 Query: 82 DVFLICFSVVNPASFQNVK--EEWVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLNDMK 139 + FL +S+ + S + E + +K+ VP +L+G + DL + Sbjct: 80 EGFLCVYSIDSQQSLDEIHSFREQILRVKD-QDEVPMILVGNKCDLEE------------ 126 Query: 140 EKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVF 175 + V E GQ +AK + ++E SA + ++ F Sbjct: 127 HREVSTEAGQAVAKSY-SIPFMETSAKKRINVEEAF 161 >5XOJ-A nrPDB Length = 182 Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 2/119 (1%) Query: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHYAVSVTVGGKQYLLGLYDTAGQE 68 K V+VGDG GKT + + F ++Y+ T+ + + +S + ++DTAG E Sbjct: 13 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFGEIKFDVWDTAGLE 72 Query: 69 DYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRD 127 + LR Y +I F V + +++NV W +L N+P +L G ++D+++ Sbjct: 73 KFGGLRDGYYINAQCAIIMFDVTSRITYKNV-PNWHRDLVRVCENIPIVLCGNKVDVKE 130 >3WYF-A nrPDB Length = 219 Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 2/119 (1%) Query: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHYAVSVTVGGKQYLLGLYDTAGQE 68 K V+VGDG GKT + + F ++Y+ T+ + + +S + ++DTAG E Sbjct: 13 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFGEIKFDVWDTAGLE 72 Query: 69 DYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRD 127 + LR Y +I F V + +++NV W +L N+P +L G ++D+++ Sbjct: 73 KFGGLRDGYYINAQCAIIMFDVTSRITYKNV-PNWHRDLVRVCENIPIVLCGNKVDVKE 130 >3E5H-A nrPDB Length = 178 Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 7/128 (5%) Query: 4 GPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHYAVSVTV-GGKQYLLGL 61 G LK VV+GDGA GKT L +A + F ++Y T+ D + +T+ G L + Sbjct: 1 GSHMRQLKIVVLGDGASGKTSLTTCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQI 60 Query: 62 YDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEW---VPELKEYAPNVPFL- 117 +D GQ ++ L+ + + N SF+N+ E+W V ++ E + P + Sbjct: 61 WDIGGQTIGGKMLDKYIYGAQGVLLVYDITNYQSFENL-EDWYTVVKKVSEESETQPLVA 119 Query: 118 LIGTQIDL 125 L+G +IDL Sbjct: 120 LVGNKIDL 127 >3Q85-A nrPDB Length = 169 Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 18/178 (10%) Query: 9 MLKCVVVGDGAVGKTCLLMSYANDAFPEEY-VPTVFDHYAVSVTVGGKQYLLGLYDTAGQ 67 + K ++VG+ VGK+ L ++ + + D Y + V ++ L +YD Q Sbjct: 2 VFKVMLVGESGVGKSTLAGTFGGLQGDHAHEMENSEDTYERRIMVDKEEVTLIVYDIWEQ 61 Query: 68 EDYD-RLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAP--NVPFLLIGTQID 124 D L+ D FLI FSV + SF V E + L+ P ++P +L+G + D Sbjct: 62 GDAGGWLQDHCLQTGDAFLIVFSVTDRRSFSKVPET-LLRLRAGRPHHDLPVILVGNKSD 120 Query: 125 LRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI 182 L + + V +E+G+ LA + +C ++E SA + +F+ A+ I Sbjct: 121 L------------ARSREVSLEEGRHLAGTL-SCKHIETSAALHHNTRELFEGAVRQI 165 >3TSO-A nrPDB Length = 178 Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 42/178 (23%), Positives = 79/178 (44%), Gaps = 16/178 (8%) Query: 8 LMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAV-SVTVGGKQYLLGLYDTAG 66 + K V++G+ VGKT LL + + F + T+ ++ +V +G ++DTAG Sbjct: 9 FVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAG 68 Query: 67 QEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIGTQIDL 125 E Y + Y L+ F + ++ V E W+ EL ++A + +L+G + DL Sbjct: 69 LERYRAITSAYYRGAVGALLVFDLTKHQTYA-VVERWLKELYDHAEATIVVMLVGNKSDL 127 Query: 126 RDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAIL 183 + + V E+ + A+ G ++E SAL ++ F+ + I Sbjct: 128 S------------QAREVPTEEARMFAENNG-LLFLETSALDSTNVELAFETVLKEIF 172 >2GF0-A nrPDB Length = 199 Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 35/160 (21%), Positives = 72/160 (45%), Gaps = 16/160 (10%) Query: 22 KTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPMT 81 K+ L++ + F + Y+PT+ D Y ++ L + DT G + ++ LS Sbjct: 21 KSSLVLRFVKGTFRDTYIPTIEDTYRQVISCDKSVCTLQITDTTGSHQFPAMQRLSISKG 80 Query: 82 DVFLICFSVVNPASFQNVKE--EWVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLNDMK 139 F++ FSV + S + + + + ++K ++P +L+G + D Sbjct: 81 HAFILVFSVTSKQSLEELGPIYKLIVQIKGSVEDIPVMLVGNKC-------------DET 127 Query: 140 EKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAI 179 ++ V + Q +A+E C ++E SA +K +F E + Sbjct: 128 QREVDTREAQAVAQE-WKCAFMETSAKMNYNVKELFQELL 166 >2G3Y-A nrPDB Length = 211 Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 44/194 (22%), Positives = 91/194 (46%), Gaps = 22/194 (11%) Query: 5 PGALMLKCVVVGDGAVGKTCLLMSYA--NDAFPEEYVPTVFDHYAVSVTVGGKQ---YLL 59 G + V++G+ VGK+ L +A +D+ + D Y ++ V G+ LL Sbjct: 33 SGNTYYRVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILL 92 Query: 60 GLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELK-EYAPNVPFLL 118 +++ G+ ++ L + D +LI +S+ + ASF+ E + + ++P +L Sbjct: 93 DMWENKGENEW--LHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIPIIL 150 Query: 119 IGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEA 178 +G + DL ++ + V V +G+ A + C ++E SA Q +K +F E Sbjct: 151 VGNKSDL------------VRCREVSVSEGRACAV-VFDCKFIETSAAVQHNVKELF-EG 196 Query: 179 IIAILTPKKHTVKK 192 I+ + ++ + +K Sbjct: 197 IVRQVRLRRDSKEK 210 >4DJT-A nrPDB Length = 218 Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 9/140 (6%) Query: 4 GPGA-----LMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV--FDHYAVSVTVGGKQ 56 GPG+ L K ++GDG VGKT + + F + Y TV +H + G Sbjct: 1 GPGSMERRELTYKICLIGDGGVGKTTYINRVLDGRFEKNYNATVGAVNHPVTFLDDQGNV 60 Query: 57 YLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPN-VP 115 ++DTAGQE L+ + Y ++ F V + + QN+ WV E + N P Sbjct: 61 IKFNVWDTAGQEKKAVLKDVYYIGASGAILFFDVTSRITCQNLA-RWVKEFQAVVGNEAP 119 Query: 116 FLLIGTQIDLRDDPKTLARL 135 ++ +ID+++ K +L Sbjct: 120 IVVCANKIDIKNRQKISKKL 139 >2CJW-A nrPDB Length = 192 Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 44/193 (22%), Positives = 91/193 (47%), Gaps = 22/193 (11%) Query: 6 GALMLKCVVVGDGAVGKTCLLMSYA--NDAFPEEYVPTVFDHYAVSVTVGGKQ---YLLG 60 G + V++G+ VGK+ L +A +D+ + D Y ++ V G+ LL Sbjct: 3 GMTYYRVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILLD 62 Query: 61 LYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELK-EYAPNVPFLLI 119 +++ G+ ++ L + D +LI +S+ + ASF+ E + + ++P +L+ Sbjct: 63 MWENKGENEW--LHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIPIILV 120 Query: 120 GTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAI 179 G + DL ++ + V V +G+ A + C ++E SA Q +K +F E I Sbjct: 121 GNKSDL------------VRCREVSVSEGRACAV-VFDCKFIETSAAVQHNVKELF-EGI 166 Query: 180 IAILTPKKHTVKK 192 + + ++ + +K Sbjct: 167 VRQVRLRRDSKEK 179 >6FF8-A nrPDB Length = 181 Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 20/164 (12%) Query: 9 MLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYL--LGLYDTAG 66 + K +V+G+ VGKT ++ Y + F + Y T+ +A+ V + L L L+D AG Sbjct: 8 LFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAG 67 Query: 67 QEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPEL--KEYAPN---VPFLLIGT 121 E + + + Y + F + ++F+ V +W +L K + PN +P +L+ Sbjct: 68 LERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGSPIPAVLLAN 126 Query: 122 QIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSA 165 + D D + P V+Q KE G + E SA Sbjct: 127 KCDQNKDS---------SQSPSQVDQ---FCKEHGFAGWFETSA 158 >2NZJ-A nrPDB Length = 175 Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 44/171 (25%), Positives = 80/171 (46%), Gaps = 16/171 (9%) Query: 9 MLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQE 68 + + V++GD VGKT L +A + + D Y ++TV G+ L + DT E Sbjct: 4 LYRVVLLGDPGVGKTSLASLFAGKQERDLHEQLGEDVYERTLTVDGEDTTLVVVDTWEAE 63 Query: 69 DYDRLRPLSYPMT--DVFLICFSVVNPASFQNVKEEWVPELKEY-APNVPFLLIGTQIDL 125 D+ + ++I +S+ + SF++ E + + + A +VP +L+G + D Sbjct: 64 KLDKSWSQESCLQGGSAYVIVYSIADRGSFESASELRIQLRRTHQADHVPIILVGNKAD- 122 Query: 126 RDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFD 176 LAR + V VE+G+ A + C ++E SA Q + +F+ Sbjct: 123 ------LARC-----REVSVEEGRACAV-VFDCKFIETSATLQHNVAELFE 161 >4CZ2-A nrPDB Length = 230 Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 40/164 (24%), Positives = 72/164 (43%), Gaps = 20/164 (12%) Query: 9 MLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYL--LGLYDTAG 66 + K +V+G+ VGKT ++ Y + F + Y T+ +A+ V + L L L+D AG Sbjct: 30 LFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAG 89 Query: 67 QEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPEL--KEYAPN---VPFLLIGT 121 E + + + Y + F + ++F+ V +W +L K + PN +P +L+ Sbjct: 90 LERFGNMTRVYYKEAMGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGSPIPAVLLAN 148 Query: 122 QIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSA 165 + D K+ + Q + KE G + E SA Sbjct: 149 KCDQN------------KDSSMSPSQMDQFCKEHGFAGWFETSA 180 >5XC3-A nrPDB Length = 176 Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 39/172 (22%), Positives = 76/172 (44%), Gaps = 16/172 (9%) Query: 11 KCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTV--GGKQYLLGLYDTAGQE 68 K +++G VGK+ ++ + + PT+ +A + GK L ++DTAGQE Sbjct: 7 KIILIGSSGVGKSSIVHQFLFNRKISNVSPTIGAAFASKQVIAKNGKTLKLNIWDTAGQE 66 Query: 69 DYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLL-IGTQIDLRD 127 + + + Y + L+ F V + SF +V W+ +L+ ++L + +ID+ Sbjct: 67 RFRSITKMYYTNSLGCLVVFDVTDRESFDDV-YYWINDLRINCHTTYYILVVANKIDI-- 123 Query: 128 DPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAI 179 K R+++ + K C + C YV S+ + +F + I Sbjct: 124 -DKNNWRVSENEIKKFCRDND---------CDYVFASSFESDTVNNLFGKMI 165 >3Q72-A nrPDB Length = 166 Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 42/175 (24%), Positives = 76/175 (43%), Gaps = 19/175 (10%) Query: 11 KCVVVGDGAVGKTCLLMSYAN--DAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQE 68 K +++G VGK+ L + D E +D S+ V G++ L +YD Q+ Sbjct: 4 KVLLLGAPGVGKSALARIFGGVEDGPEAEAAGHTYDR---SIVVDGEEASLMVYDIWEQD 60 Query: 69 DYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVP-ELKEYAPNVPFLLIGTQIDLRD 127 L M D ++I +SV + SF+ E V +VP +L+G + DL Sbjct: 61 GGRWLPGHCMAMGDAYVIVYSVTDKGSFEKASELRVQLRRARQTDDVPIILVGNKSDL-- 118 Query: 128 DPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI 182 ++ + V V++G+ A + C ++E SA ++ +F+ + I Sbjct: 119 ----------VRSREVSVDEGRACAV-VFDCKFIETSAALHHNVQALFEGVVRQI 162 >2FN4-A nrPDB Length = 181 Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 33/116 (28%), Positives = 57/116 (49%), Gaps = 4/116 (3%) Query: 22 KTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPMT 81 K+ L + + F +Y PT+ D Y +V G L + DTAGQE++ +R Sbjct: 22 KSALTIQFIQSYFVSDYDPTIEDSYTKICSVDGIPARLDILDTAGQEEFGAMREQYMRAG 81 Query: 82 DVFLICFSVVNPASFQNVKEEWVPELK-EYAPNVPFLLIGTQIDL---RDDPKTLA 133 FL+ F++ + SF V + + L+ + + P +L+G + DL R P++ A Sbjct: 82 HGFLLVFAINDRQSFNEVGKLFTQILRVKDRDDFPVVLVGNKADLESQRQVPRSEA 137 >3CLV-A nrPDB Length = 208 Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 47/204 (23%), Positives = 79/204 (38%), Gaps = 56/204 (27%) Query: 11 KCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV---FDHYAVS------------------ 49 K V++G+ +VGK+ +++ D F E T+ F Y V+ Sbjct: 9 KTVLLGESSVGKSSIVLRLTKDTFHENTNTTIGASFCTYVVNLNDINIKNNSNNEKNNNI 68 Query: 50 ----------VTVGGKQY-------LLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVN 92 +T Y ++DTAGQE Y + PL Y ++ F + N Sbjct: 69 NSINDDNNVIITNQHNNYNENLCNIKFDIWDTAGQERYASIVPLYYRGATCAIVVFDISN 128 Query: 93 PASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLNDMKEK-PVCVEQGQKL 151 + K WV +LK + N +L+ +ID K K V + + QK Sbjct: 129 SNTLDRAK-TWVNQLK-ISSNYIIILVANKID--------------KNKFQVDILEVQKY 172 Query: 152 AKEIGACCYVECSALTQKGLKTVF 175 A++ +++ SA T +K +F Sbjct: 173 AQD-NNLLFIQTSAKTGTNIKNIF 195 >3C5C-A nrPDB Length = 187 Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 48/180 (26%), Positives = 77/180 (42%), Gaps = 22/180 (12%) Query: 6 GALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTA 65 G L + ++G GK+ L + + F EY P + D Y+ TV + L + DTA Sbjct: 18 GPLEVNLAILGRRGAGKSALTVKFLTKRFISEYDPNLEDTYSSEETVDHQPVHLRVMDTA 77 Query: 66 GQEDYDRLRPLSYPMT--DVFLICFSV---VNPASFQNVKEEWVPELKEYAPNVPFLLIG 120 D D R + FL+ +SV + S + E KE ++P LL+G Sbjct: 78 ---DLDTPRNCERYLNWAHAFLVVYSVDSRQSFDSSSSYLELLALHAKETQRSIPALLLG 134 Query: 121 TQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSA-LTQKGLKTVFDEAI 179 ++D+ + + V +G LA G C + E SA L + ++ VF EA+ Sbjct: 135 NKLDM------------AQYRQVTKAEGVALAGRFG-CLFFEVSACLDFEHVQHVFHEAV 181 >3IHW-A nrPDB Length = 184 Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 21/181 (11%) Query: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQED 69 LK +VG+ + GK+ L+ Y + +E P + + V G+ YLL + D G + Sbjct: 21 LKVGIVGNLSSGKSALVHRYLTGTYVQEESPEG-GRFKKEIVVDGQSYLLLIRDEGGPPE 79 Query: 70 YDRLRPLSY-PMTDVFLICFSVVNPASFQNVKEEWVPELK-EYAPNVPFLLIGTQIDLR- 126 L + D + FS+ + SFQ V ++ A VP +L+GTQ + Sbjct: 80 ------LQFAAWVDAVVFVFSLEDEISFQTVYNYFLRLCSFRNASEVPMVLVGTQDAISA 133 Query: 127 DDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILTPK 186 +P+ ++D + + KL+ ++ C Y E A ++ VF + ++ + Sbjct: 134 ANPRV---IDDSRAR--------KLSTDLKRCTYYETCATYGLNVERVFQDVAQKVVALR 182 Query: 187 K 187 K Sbjct: 183 K 183 >3D6T-B nrPDB Length = 171 Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 28/130 (21%), Positives = 59/130 (45%), Gaps = 6/130 (4%) Query: 10 LKCVVVGDGAVGKTCLLMSY-----ANDAFPEEYVPTVFDHYAVSVTVGGKQYL-LGLYD 63 +K ++VG+ GKT LL ++ V + + + K+ L L ++D Sbjct: 1 MKLMIVGNTGSGKTTLLQQLMKTKKSDLGMQSATVGIDVKDWPIQIRDKRKRDLVLNVWD 60 Query: 64 TAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQI 123 AG+E++ P ++L + + + + + W+ +K A + P +L+GT + Sbjct: 61 FAGREEFYSTHPHFMTQRALYLAVYDLSKGQAEVDAMKPWLFNIKARASSSPVILVGTHL 120 Query: 124 DLRDDPKTLA 133 D+ D+ + A Sbjct: 121 DVSDEKQRKA 130 >1X8L-A nrPDB Length = 351 Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust. Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 11/97 (11%) Query: 96 FQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEI 155 F++VKE W K + PN+ FL L+D P ++AR+ D K + EQ Q+L++ + Sbjct: 228 FEHVKEAWA---KRHDPNMLFLFYEDY--LKDLPGSIARIADFLGKKLSEEQIQRLSEHL 282 Query: 156 GACCYVECSALTQKGLKTVFDEAIIAILTPKKHTVKK 192 + A+ + + I IL +H ++K Sbjct: 283 NFEKFKNNGAVNMEDYRE------IGILADGEHFIRK 313 >5C1S-A nrPDB Length = 391 Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust. Identities = 25/124 (20%), Positives = 54/124 (43%), Gaps = 5/124 (4%) Query: 8 LMLKCVVVGDGAVGKTCLLMSYA-NDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAG 66 + ++ ++VGD VGKT + +A D +++ + + + +Y + + D Sbjct: 221 IKIRMLMVGDQNVGKTTFIRKFALQDPTGHDFMNAITTRFEMEKI----KYEIIMIDWGF 276 Query: 67 QEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLR 126 + P + LI + + N SFQN+ ++ P + +V +++G + DL Sbjct: 277 YNKLLQTNPAISRTIEAILIVYDITNEESFQNIHRKYYPLINNKFSDVAGVIVGYKTDLE 336 Query: 127 DDPK 130 K Sbjct: 337 AQRK 340 Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust. Identities = 29/120 (24%), Positives = 51/120 (42%), Gaps = 7/120 (5%) Query: 6 GALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTA 65 G ++ +VVG VGKT L D F E + + V + + + D A Sbjct: 59 GKKEIRLLVVGSSGVGKTTLC-----DCFFESHQSQGEETREKHVQIDNDFIRISISDIA 113 Query: 66 GQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAP-NVPFLLIGTQID 124 GQ+ + Y D L+ + + SF ++K W+P++ Y + ++IG + D Sbjct: 114 GQQSFYACDN-PYDGYDAILVMYDITELKSFTDLKTMWLPDIFLYCNIDTQIIIIGNKKD 172 >2IWR-A nrPDB Length = 178 Score = 35.8 bits (81), Expect = 0.014, Method: Compositional matrix adjust. Identities = 40/183 (21%), Positives = 74/183 (40%), Gaps = 21/183 (11%) Query: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQED 69 L+ V+GD GK+ L+ + ++ + T + Y + V G+ +L+ + + AG D Sbjct: 8 LRLGVLGDARSGKSSLIHRFLTGSY-QVLEKTESEQYKKEMLVDGQTHLVLIREEAGAPD 66 Query: 70 YDRLRPLSYPMTDVFLICFSVVNPASFQNVKE--EWVPELK-EYAPNVPFLLIGTQIDLR 126 D + FS+ + SFQ V + L+ E + L+GTQ + Sbjct: 67 -----AKFSGWADAVIFVFSLEDENSFQAVSRLHGQLSSLRGEGRGGLALALVGTQDRIS 121 Query: 127 -DDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILTP 185 P+ + D + + +C + + C Y E A + VF E ++T Sbjct: 122 ASSPRVV---GDARARALCAD--------MKRCSYYETCATYGLNVDRVFQEVAQKVVTL 170 Query: 186 KKH 188 +K Sbjct: 171 RKQ 173 >3EC1-A nrPDB Length = 369 Score = 32.3 bits (72), Expect = 0.15, Method: Compositional matrix adjust. Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 9/82 (10%) Query: 90 VVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQ 149 VVN + ++P L +A + P LL+G + DL P+++ + P + + Sbjct: 75 VVNIVDIFDFNGSFIPGLPRFAADNPILLVGNKADLL--PRSV-------KYPKLLRWMR 125 Query: 150 KLAKEIGACCYVECSALTQKGL 171 ++A+E+G C C KG+ Sbjct: 126 RMAEELGLCPVDVCLVSAAKGI 147 >2GAO-A nrPDB Length = 208 Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust. Identities = 30/118 (25%), Positives = 49/118 (41%), Gaps = 5/118 (4%) Query: 11 KCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDY 70 K V +G GKT LL +D + +VPT+ + +T+ G + +D G E Sbjct: 37 KLVFLGLDNAGKTTLLHMLKDDRLGQ-HVPTLHP-TSEELTIAGMTFTT--FDLGGHEQA 92 Query: 71 DRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELK-EYAPNVPFLLIGTQIDLRD 127 R+ P + + + + K E + E NVP L++G +ID D Sbjct: 93 RRVWKNYLPAINGIVFLVDCADHSRLVESKVELNALMTDETISNVPILILGNKIDRTD 150 >4WNR-A nrPDB Length = 349 Score = 30.8 bits (68), Expect = 0.41, Method: Compositional matrix adjust. Identities = 25/117 (21%), Positives = 47/117 (40%), Gaps = 7/117 (5%) Query: 10 LKCVVVGDGAVGKTCLLMSYANDAFP-EEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQE 68 +K ++VGDG GKT LL + F E+ + K+ + +D GQE Sbjct: 42 VKVLLVGDGEAGKTSLLKRLLGEGFDGNEHQTQGINIKKWGFKDKDKEIKVNFWDFGGQE 101 Query: 69 DYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEE-WVPELKEYAPNVPFLLIGTQID 124 ++++ S ++ K E W+ ++ + + P L+ +ID Sbjct: 102 IMHATHQFFLSKRSLYILVLD-----SRRDEKAEYWLKHIRSFGGDSPVLVALNKID 153 >3WIA-A nrPDB Length = 287 Score = 30.8 bits (68), Expect = 0.42, Method: Compositional matrix adjust. Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 5/85 (5%) Query: 99 VKEEWVP--ELKEYAPNVPFLLIGTQIDLR-DDPKTLARLNDMKEKPVCVEQGQKLAKEI 155 ++ EW ++ ++ VP ++ + L+ DP T +KEKP+ + G+K+ I Sbjct: 137 IQNEWYKYNDMNDFQNGVPSYVVFSSKALKPGDPNTNGDTFTLKEKPLLAKVGEKIRLYI 196 Query: 156 GACCYVECSALTQKGLKTVFDEAII 180 E S+ G TVFD+ + Sbjct: 197 NNVGPNEVSSFHVVG--TVFDDVYL 219 >3DPU-A nrPDB Length = 535 Score = 30.8 bits (68), Expect = 0.42, Method: Compositional matrix adjust. Identities = 26/128 (20%), Positives = 50/128 (39%), Gaps = 21/128 (16%) Query: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSV------TVGG-------KQ 56 +K ++GDG GKT LL + F P + ++V + G K+ Sbjct: 42 IKVHLIGDGMAGKTSLLKQLIGETFD----PKESQTHGLNVVTKQAPNIKGLENDDELKE 97 Query: 57 YLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPF 116 L +D GQE + V+++ ++ K W+ +++Y P Sbjct: 98 CLFHFWDFGGQEIMHASHQFFMTRSSVYMLLLDSRTDSN----KHYWLRHIEKYGGKSPV 153 Query: 117 LLIGTQID 124 +++ +ID Sbjct: 154 IVVMNKID 161 >1F6B-A nrPDB Length = 198 Score = 30.4 bits (67), Expect = 0.49, Method: Compositional matrix adjust. Identities = 33/129 (25%), Positives = 54/129 (41%), Gaps = 6/129 (4%) Query: 11 KCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDY 70 K V +G GKT LL +D + +VPT+ + +T+ G + +D G Sbjct: 27 KLVFLGLDNAGKTTLLHMLKDDRLGQ-HVPTLHP-TSEELTIAGMTFTT--FDLGGHIQA 82 Query: 71 DRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPEL-KEYAPNVPFLLIGTQIDLRDDP 129 R+ P + + + KEE + E NVP L++G +ID R + Sbjct: 83 RRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKID-RPEA 141 Query: 130 KTLARLNDM 138 + RL +M Sbjct: 142 ISEERLREM 150 >3X1F-A nrPDB Length = 352 Score = 30.4 bits (67), Expect = 0.57, Method: Compositional matrix adjust. Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 5/82 (6%) Query: 99 VKEEWVP--ELKEYAPNVPFLLIGTQIDLR-DDPKTLARLNDMKEKPVCVEQGQKLAKEI 155 ++ EW ++ ++ VP ++ + L+ DP T +KEKP+ + G+K+ I Sbjct: 202 IQNEWYKYNDMNDFQNGVPSYVVFSSKALKPGDPNTNGDTFTLKEKPLLAKVGEKIRLYI 261 Query: 156 GACCYVECSALTQKGLKTVFDE 177 E S+ G TVFD+ Sbjct: 262 NNVGPNEVSSFHVVG--TVFDD 281 >1I6Q-A nrPDB Length = 689 Score = 30.0 bits (66), Expect = 0.71, Method: Compositional matrix adjust. Identities = 15/49 (30%), Positives = 26/49 (53%) Query: 32 DAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPM 80 DAF E ++ V H V+ +V GK+ L+ QE + R +P ++ + Sbjct: 240 DAFQECHLARVPSHAVVARSVNGKEDLIWKLLVKAQEKFGRGKPSAFQL 288 >4NK4-A nrPDB Length = 301 Score = 30.0 bits (66), Expect = 0.79, Method: Compositional matrix adjust. Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 14/87 (16%) Query: 21 GKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPM 80 GK L+M AND + V + + G+ RL+PL+ + Sbjct: 41 GKRGLIMGVANDHSIAWGIAKVLHSAGAQLA----------FSYQGESIGKRLKPLALTV 90 Query: 81 TDVFLICFSVVNPAS----FQNVKEEW 103 F+I +V +P+S F+ +KE W Sbjct: 91 DSDFMIPCNVEDPSSMDLLFERIKERW 117 >2YC4-C nrPDB Length = 208 Score = 28.1 bits (61), Expect = 2.9, Method: Compositional matrix adjust. Identities = 34/132 (25%), Positives = 56/132 (42%), Gaps = 16/132 (12%) Query: 6 GALMLKCVVVGDGAVGKTCLLMSYANDA--FPEEYVPTVFDHYAVS------VTVGGKQY 57 L K VVG+ VGK+ L+ + + F ++Y T V+ TV + + Sbjct: 17 ATLRCKVAVVGEATVGKSALISMFTSKGSKFLKDYAMTSGVEVVVAPVTIPDTTVSVELF 76 Query: 58 LLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPN---- 113 LL DTAG + Y + ++ F V + SF++ K W LK P+ Sbjct: 77 LL---DTAGSDLYKEQISQYWNGVYYAILVFDVSSMESFESCK-AWFELLKSARPDRERP 132 Query: 114 VPFLLIGTQIDL 125 + +L+ + DL Sbjct: 133 LRAVLVANKTDL 144 >3H0M-B nrPDB Length = 478 Score = 27.7 bits (60), Expect = 3.7, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Query: 129 PKTLARLNDM-KEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILTPK 186 P+ LA L + KEK + + G+++ KE+ + +KGLK + DE I L K Sbjct: 369 PEHLAELVKLIKEKVISTKIGKEVIKEMVETGKTPSQIVEEKGLKQITDENQIKELVKK 427 >6HLU-A nrPDB Length = 974 Score = 27.7 bits (60), Expect = 3.8, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 50/127 (39%), Gaps = 19/127 (14%) Query: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVT-----VGG-------KQY 57 +K ++GDG GKT LL + F + T H VT + G K+ Sbjct: 481 IKVHLIGDGMAGKTSLLKQLIGETFDPKESQT---HGLNVVTKQAPNIKGLENDDELKEC 537 Query: 58 LLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFL 117 L +D GQE + V+++ ++ K W+ +++Y P + Sbjct: 538 LFHFWDFGGQEIMHASHQFFMTRSSVYMLLLDSRTDSN----KHYWLRHIEKYGGKSPVI 593 Query: 118 LIGTQID 124 ++ +ID Sbjct: 594 VVMNKID 600 >4R71-B nrPDB Length = 595 Score = 27.3 bits (59), Expect = 4.4, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 36/86 (41%), Gaps = 11/86 (12%) Query: 16 GDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRP 75 GDGA+ + L+ +A + YVP + DH YL L+ E D L P Sbjct: 474 GDGALVGSVLINPFAKNRGWIRYVPVITDHTRDRERAELGSYLYDLFSRCLSESNDGL-P 532 Query: 76 LSYP----MTDVF----LICFSVVNP 93 L P D+F LIC S NP Sbjct: 533 LRGPSGCDSADLFAIDQLICRS--NP 556 >3ZFC-A nrPDB Length = 350 Score = 26.9 bits (58), Expect = 5.4, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 55/130 (42%), Gaps = 25/130 (19%) Query: 39 VPTVFDHYAVSV-----TVGGKQYLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNP 93 + VF Y +V T GK Y +G TA QE + + V + F +N Sbjct: 73 IKGVFKGYNATVLAYGQTGSGKTYSMGGAYTAEQEHDSAIGVIPR----VIQLLFKEINK 128 Query: 94 AS-FQNVKEEWVPELKEYAPNVPFLL-----IGTQIDLRDDPKTLARLNDMKEKPV---- 143 S F+ + V L+ Y + LL TQI++R+DPK ++ + EK V Sbjct: 129 KSDFEFTLK--VSYLEIYNEEILDLLCSSREKATQINIREDPKEGIKIVGLTEKTVLVAS 186 Query: 144 ----CVEQGQ 149 C+EQG Sbjct: 187 DTVSCLEQGN 196 >5A4J-A nrPDB Length = 559 Score = 26.2 bits (56), Expect = 9.4, Method: Compositional matrix adjust. Identities = 12/22 (54%), Positives = 13/22 (59%) Query: 113 NVPFLLIGTQIDLRDDPKTLAR 134 NVP + TQ L DDPK L R Sbjct: 484 NVPVCIAKTQYSLTDDPKLLGR 505 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 2ATX-A nrPDB 275 7e-75 3RYT-C nrPDB 262 6e-71 5C2K-A nrPDB 262 7e-71 2J0V-A nrPDB 262 1e-70 3TH5-A nrPDB 259 5e-70 5ZHX-e nrPDB 257 2e-69 2WKQ-A nrPDB 257 3e-69 3VHL-B nrPDB 257 3e-69 2W2X-A nrPDB 252 6e-68 1RYH-A nrPDB 252 1e-67 5JCP-B nrPDB 251 2e-67 2NTY-C nrPDB 245 8e-66 3BWD-D nrPDB 245 9e-66 2WBL-C nrPDB 245 1e-65 2FV8-A nrPDB 243 3e-65 2J1L-A nrPDB 243 4e-65 3A58-B nrPDB 238 2e-63 5ZVP-A nrPDB 236 4e-63 4U5X-A nrPDB 233 5e-62 5VCU-A nrPDB 231 2e-61 2Q3H-A nrPDB 230 3e-61 4MIT-A nrPDB 225 1e-59 2RHD-A nrPDB 219 7e-58 5FBL-B nrPDB 217 2e-57 5SZI-A nrPDB 216 4e-57 4LHX-A nrPDB 216 6e-57 5SZJ-A nrPDB 215 2e-56 3L0I-B nrPDB 214 2e-56 6IF2-B nrPDB 213 3e-56 5SZH-B nrPDB 213 3e-56 5LPN-A nrPDB 213 4e-56 4QXA-A nrPDB 213 5e-56 2F9L-A nrPDB 213 5e-56 1GWN-A nrPDB 212 7e-56 5CM8-B nrPDB 212 9e-56 2A5J-A nrPDB 212 1e-55 1M7B-A nrPDB 212 1e-55 1Z0A-A nrPDB 210 2e-55 4M8N-E nrPDB 210 4e-55 1ZBD-A nrPDB 210 4e-55 3CPH-A nrPDB 210 5e-55 4UJ4-A nrPDB 209 6e-55 3DZ8-A nrPDB 209 7e-55 3CUE-F nrPDB 209 8e-55 1WMS-A nrPDB 209 8e-55 6O62-A nrPDB 209 9e-55 2OCB-A nrPDB 208 9e-55 2WWX-A nrPDB 208 1e-54 1YZN-A nrPDB 208 1e-54 3CPJ-B nrPDB 208 2e-54 2GF9-A nrPDB 207 2e-54 1Z0F-A nrPDB 207 4e-54 6HUF-A nrPDB 207 4e-54 4RKE-A nrPDB 207 4e-54 2OCY-C nrPDB 206 5e-54 3RAB-A nrPDB 206 5e-54 2F7S-A nrPDB 206 6e-54 4RKF-A nrPDB 205 9e-54 3BC1-A nrPDB 204 2e-53 2IEZ-A nrPDB 204 2e-53 5LEF-A nrPDB 203 3e-53 5XR6-A nrPDB 203 3e-53 5UB8-A nrPDB 203 3e-53 2IEY-A nrPDB 203 4e-53 4G01-B nrPDB 202 1e-52 3RWM-B nrPDB 200 3e-52 1X3S-A nrPDB 200 3e-52 2FG5-A nrPDB 200 5e-52 4DXA-A nrPDB 199 5e-52 2O52-A nrPDB 199 5e-52 2BMD-A nrPDB 199 8e-52 2HUP-A nrPDB 199 9e-52 4KLZ-A nrPDB 198 1e-51 2EW1-A nrPDB 197 3e-51 2IL1-A nrPDB 197 3e-51 2G6B-A nrPDB 196 4e-51 1TU4-A nrPDB 196 5e-51 3TSO-A nrPDB 196 6e-51 3REG-A nrPDB 195 1e-50 3BFK-A nrPDB 195 2e-50 1EK0-A nrPDB 194 2e-50 4PHF-A nrPDB 194 3e-50 2HEI-A nrPDB 194 3e-50 5LDD-C nrPDB 193 6e-50 5HZH-A nrPDB 192 1e-49 1ZC4-A nrPDB 191 1e-49 2KE5-A nrPDB 191 2e-49 1YZU-A nrPDB 190 4e-49 1Z06-A nrPDB 190 4e-49 5YOZ-A nrPDB 190 5e-49 2REX-B nrPDB 190 5e-49 2FFQ-A nrPDB 190 5e-49 6IYB-A nrPDB 188 1e-48 1YVD-A nrPDB 188 1e-48 2GIL-A nrPDB 187 3e-48 1D5C-A nrPDB 186 4e-48 2G77-B nrPDB 186 6e-48 4KU4-A nrPDB 185 1e-47 3CON-A nrPDB 183 4e-47 2ERX-A nrPDB 182 8e-47 4WA7-A nrPDB 182 1e-46 5UHV-A nrPDB 181 1e-46 5WDQ-A nrPDB 181 2e-46 2P5S-A nrPDB 179 6e-46 2ERY-A nrPDB 178 1e-45 5WDR-A nrPDB 177 3e-45 2ATV-A nrPDB 176 8e-45 4FMC-F nrPDB 174 2e-44 2FN4-A nrPDB 174 2e-44 3PIR-A nrPDB 173 6e-44 3T5G-A nrPDB 172 7e-44 1Z22-A nrPDB 170 5e-43 3OES-A nrPDB 167 3e-42 3CBQ-A nrPDB 166 4e-42 4CZ2-A nrPDB 164 2e-41 3RAP-R nrPDB 164 2e-41 2G3Y-A nrPDB 163 4e-41 2GF0-A nrPDB 163 4e-41 6FF8-A nrPDB 163 7e-41 5UWI-A nrPDB 163 7e-41 2N1B-A nrPDB 163 7e-41 5CLL-A nrPDB 163 7e-41 2CJW-A nrPDB 163 7e-41 3Q85-A nrPDB 161 2e-40 5XC3-A nrPDB 160 4e-40 3WYF-A nrPDB 156 5e-39 5XOJ-A nrPDB 155 1e-38 3Q72-A nrPDB 153 4e-38 2NZJ-A nrPDB 153 4e-38 3E5H-A nrPDB 152 1e-37 3CLV-A nrPDB 144 2e-35 4DJT-A nrPDB 142 1e-34 3C5C-A nrPDB 134 2e-32 3IHW-A nrPDB 127 4e-30 5C1S-A nrPDB 111 3e-25 3D6T-B nrPDB 105 1e-23 1X8L-A nrPDB 65 2e-11 Sequences not found previously or not previously below threshold: 4KYI-B nrPDB 193 5e-50 2IWR-A nrPDB 102 9e-23 2YC4-C nrPDB 86 9e-18 2AL7-A nrPDB 83 7e-17 4ILE-A nrPDB 81 4e-16 6HLU-A nrPDB 74 3e-14 3DPU-A nrPDB 74 3e-14 4WNR-A nrPDB 73 8e-14 3LVQ-E nrPDB 73 8e-14 2A5F-A nrPDB 73 1e-13 1YZG-A nrPDB 71 2e-13 2H16-A nrPDB 71 3e-13 6BBQ-A nrPDB 71 4e-13 4YLG-A nrPDB 70 5e-13 5NZV-F nrPDB 69 1e-12 3O47-A nrPDB 69 2e-12 1Z6X-A nrPDB 69 2e-12 3LRP-A nrPDB 69 2e-12 6FAE-B nrPDB 67 5e-12 5UF8-A nrPDB 65 2e-11 6DFF-C nrPDB 65 2e-11 3AQ4-A nrPDB 65 2e-11 1J2J-A nrPDB 64 3e-11 2B6H-A nrPDB 64 4e-11 4C0K-A nrPDB 63 1e-10 4ZI3-A nrPDB 62 2e-10 2H57-A nrPDB 61 5e-10 1MOZ-A nrPDB 60 6e-10 1KSG-A nrPDB 59 2e-09 3BH6-A nrPDB 58 2e-09 4V0N-A nrPDB 58 3e-09 5EE5-B nrPDB 57 5e-09 2GAO-A nrPDB 57 6e-09 3GEH-A nrPDB 56 2e-08 6CES-A nrPDB 55 2e-08 1XZP-A nrPDB 55 2e-08 2GJ9-A nrPDB 53 9e-08 1M2O-B nrPDB 53 9e-08 6GNI-B nrPDB 53 1e-07 3J8G-X nrPDB 53 1e-07 4ARZ-A nrPDB 52 2e-07 5DE3-A nrPDB 52 2e-07 2X77-A nrPDB 51 4e-07 1F6B-A nrPDB 51 4e-07 6IAE-A nrPDB 50 8e-07 3T1O-A nrPDB 50 9e-07 2LKD-A nrPDB 49 9e-07 2YWH-A nrPDB 49 1e-06 5DI3-B nrPDB 48 2e-06 4M9Q-A nrPDB 48 2e-06 2DYK-A nrPDB 47 5e-06 1MKY-A nrPDB 47 6e-06 5KU1-A nrPDB 47 7e-06 5KSO-A nrPDB 46 8e-06 1WF3-A nrPDB 46 1e-05 5J8B-z nrPDB 45 2e-05 5IMR-C nrPDB 45 2e-05 4BAS-A nrPDB 45 2e-05 5DN8-A nrPDB 45 3e-05 5LAD-A nrPDB 45 3e-05 6G79-A nrPDB 44 5e-05 2E87-A nrPDB 44 6e-05 2QAG-A nrPDB 44 6e-05 3FTQ-A nrPDB 43 7e-05 3GEE-A nrPDB 43 7e-05 3T5D-A nrPDB 42 2e-04 5YMX-A nrPDB 42 2e-04 3CB4-D nrPDB 41 3e-04 2QAG-C nrPDB 41 5e-04 6GB2-BC nrPDB 41 5e-04 3JB9-B nrPDB 40 6e-04 5CYO-A nrPDB 40 8e-04 6GDG-D nrPDB 40 8e-04 4KJZ-A nrPDB 40 0.001 4B44-A nrPDB 39 0.001 2GTP-A nrPDB 39 0.001 3J4J-A nrPDB 39 0.001 3PR1-A nrPDB 39 0.001 5KUT-A nrPDB 39 0.002 5YT0-A nrPDB 38 0.003 3R9W-A nrPDB 38 0.003 3IEU-A nrPDB 38 0.003 5NON-A nrPDB 38 0.004 2VNE-A nrPDB 38 0.004 5FG3-A nrPDB 38 0.004 6D4G-A nrPDB 38 0.004 3IZY-P nrPDB 38 0.004 3EC1-A nrPDB 38 0.005 4U00-A nrPDB 37 0.006 3C5H-A nrPDB 37 0.006 4V8Y-CP nrPDB 37 0.007 2CXX-A nrPDB 37 0.007 2ODE-A nrPDB 37 0.008 5KH0-A nrPDB 36 0.009 1PUJ-A nrPDB 36 0.009 3WBI-A nrPDB 36 0.010 4NCF-A nrPDB 36 0.010 3V00-C nrPDB 36 0.010 4V8Z-CV nrPDB 36 0.011 5ZZM-A nrPDB 36 0.017 3LLU-A nrPDB 36 0.017 4V7F-o nrPDB 35 0.019 4KV9-A nrPDB 35 0.025 4TN1-B nrPDB 34 0.032 4UJC-AB nrPDB 34 0.033 6OIK-A nrPDB 34 0.034 4NCL-A nrPDB 34 0.036 4N3G-A nrPDB 34 0.036 1ZCB-A nrPDB 34 0.037 2Q3F-A nrPDB 34 0.043 5IRR-A nrPDB 34 0.045 4DCU-A nrPDB 34 0.046 1SHZ-A nrPDB 34 0.064 6CES-C nrPDB 34 0.065 6G12-A nrPDB 33 0.067 2RGK-A nrPDB 33 0.085 5X4B-A nrPDB 33 0.10 5H7J-A nrPDB 33 0.10 1HEY-A nrPDB 33 0.11 5AR1-A nrPDB 33 0.11 6F1T-i nrPDB 33 0.11 3K53-A nrPDB 33 0.12 1NI3-A nrPDB 33 0.12 4WQY-BZ nrPDB 33 0.12 6HZK-A nrPDB 33 0.12 3H2Y-A nrPDB 33 0.12 6F1Y-j nrPDB 33 0.13 5H7K-A nrPDB 32 0.15 2ZBL-A nrPDB 32 0.16 6D9H-A nrPDB 32 0.17 2WJG-A nrPDB 32 0.17 1TAG-A nrPDB 32 0.22 2P8Y-T nrPDB 32 0.24 2GZA-A nrPDB 31 0.27 1ZCA-A nrPDB 31 0.28 1YE8-A nrPDB 31 0.28 4YMS-J nrPDB 31 0.29 3FVQ-A nrPDB 31 0.32 6N0I-A nrPDB 31 0.32 5B3F-A nrPDB 31 0.37 4QJ3-A nrPDB 31 0.40 5EE0-A nrPDB 31 0.41 2BCJ-Q nrPDB 31 0.42 4Z54-A nrPDB 31 0.44 4OO1-B nrPDB 31 0.46 5LKM-A nrPDB 31 0.49 3A1W-A nrPDB 31 0.49 4HZI-A nrPDB 31 0.50 2XTZ-A nrPDB 31 0.51 5C78-A nrPDB 31 0.53 5M04-A nrPDB 31 0.54 5OCH-A nrPDB 31 0.54 4CSU-9 nrPDB 30 0.71 4TLD-A nrPDB 30 0.72 5TV2-A nrPDB 30 0.75 2YV5-A nrPDB 30 0.75 4MRS-A nrPDB 30 0.76 1ZE1-A nrPDB 30 0.76 3A1U-A nrPDB 30 0.80 3S1A-A nrPDB 30 0.82 2OUK-A nrPDB 30 0.83 2YYZ-A nrPDB 30 0.93 5MRE-WW nrPDB 29 1.00 1IQP-A nrPDB 29 1.00 6ID0-C nrPDB 29 1.0 6OIJ-A nrPDB 29 1.0 1IY1-A nrPDB 29 1.0 3D0O-A nrPDB 29 1.1 2PJZ-A nrPDB 29 1.1 2DHR-A nrPDB 29 1.1 4RY2-A nrPDB 29 1.1 5TY0-A nrPDB 29 1.2 4MYH-A nrPDB 29 1.2 3LLM-A nrPDB 29 1.3 1YR7-A nrPDB 29 1.3 5VHD-D nrPDB 29 1.3 1H65-A nrPDB 29 1.3 2NQL-A nrPDB 29 1.3 3GD7-A nrPDB 29 1.4 5I8Q-A nrPDB 29 1.4 5D0U-A nrPDB 29 1.5 4V7D-BZ nrPDB 29 1.5 1Z6G-A nrPDB 29 1.5 6H7G-A nrPDB 29 1.6 3PXG-A nrPDB 29 1.6 5IDV-A nrPDB 29 1.6 2QAG-B nrPDB 29 1.6 5D4W-A nrPDB 29 1.6 2QU8-A nrPDB 29 1.6 6EMW-E nrPDB 29 1.6 6EM8-A nrPDB 29 1.6 4YPL-A nrPDB 29 1.6 3PXI-A nrPDB 29 1.7 5CDF-E nrPDB 29 1.7 1WXQ-A nrPDB 29 1.7 4YPN-A nrPDB 29 1.7 6ED3-A nrPDB 29 1.8 5OFO-C nrPDB 29 1.8 3B5X-A nrPDB 29 1.8 3J3U-A nrPDB 29 1.8 2P65-A nrPDB 29 1.8 4CIU-A nrPDB 29 1.8 6IC4-I nrPDB 29 1.8 1QVR-A nrPDB 29 1.8 1JBK-A nrPDB 29 1.9 1IHU-A nrPDB 29 1.9 5MKK-A nrPDB 29 2.0 6QUZ-B nrPDB 29 2.0 5THX-A nrPDB 29 2.0 6I3O-A nrPDB 29 2.0 1WDT-A nrPDB 29 2.0 1JAL-A nrPDB 29 2.0 5GM6-Y nrPDB 28 2.1 5ZME-A nrPDB 28 2.2 1R6B-X nrPDB 28 2.2 1IRQ-A nrPDB 28 2.2 2I3B-A nrPDB 28 2.3 6G2G-A nrPDB 28 2.3 5IFK-A nrPDB 28 2.3 3N5F-A nrPDB 28 2.3 4HSE-A nrPDB 28 2.3 5JZV-A nrPDB 28 2.4 2XND-D nrPDB 28 2.4 2W6I-D nrPDB 28 2.4 2P5T-B nrPDB 28 2.5 5ZLU-EE nrPDB 28 2.5 6FA9-A nrPDB 28 2.5 6BZR-B nrPDB 28 2.5 4A9A-A nrPDB 28 2.6 3PV0-A nrPDB 28 2.6 2OHF-A nrPDB 28 2.6 5B6K-A nrPDB 28 2.6 5IK2-D nrPDB 28 2.6 4Q7L-A nrPDB 28 2.6 1M0T-A nrPDB 28 2.7 6QUZ-A nrPDB 28 2.8 4HUQ-A nrPDB 28 2.9 2WJI-A nrPDB 28 2.9 6HA8-V nrPDB 28 3.0 4FID-A nrPDB 28 3.0 4O0M-A nrPDB 28 3.1 1EZ4-A nrPDB 28 3.1 3LXX-A nrPDB 28 3.2 4MKI-B nrPDB 28 3.3 3Q06-A nrPDB 28 3.3 2IW3-A nrPDB 28 3.3 4Q7K-A nrPDB 28 3.3 3VX4-A nrPDB 28 3.3 1E94-E nrPDB 28 3.4 5DO7-A nrPDB 28 3.4 4XD7-D nrPDB 28 3.5 5JSZ-B nrPDB 28 3.5 1IM2-A nrPDB 28 3.5 4XGC-D nrPDB 28 3.6 2XOK-D nrPDB 27 3.7 2QTH-A nrPDB 27 3.7 1OFI-A nrPDB 27 3.7 6FKI-F nrPDB 27 3.8 5NIK-J nrPDB 27 3.8 5LJA-A nrPDB 27 3.8 5LQY-D nrPDB 27 3.9 5FL7-D nrPDB 27 3.9 4ZU9-A nrPDB 27 4.1 5JWO-A nrPDB 27 4.2 6D00-1 nrPDB 27 4.2 2XUA-A nrPDB 27 4.2 4Z8X-A nrPDB 27 4.3 2GHI-A nrPDB 27 4.3 2GA8-A nrPDB 27 4.3 1U0L-A nrPDB 27 4.3 3DEF-A nrPDB 27 4.4 5GKO-A nrPDB 27 4.5 5TV4-A nrPDB 27 4.6 3EPJ-A nrPDB 27 4.9 2P4Q-A nrPDB 27 5.0 5AJ2-A nrPDB 27 5.3 6FOC-D nrPDB 27 5.3 2IYT-A nrPDB 27 5.5 5CA8-A nrPDB 27 5.7 2B8N-A nrPDB 27 5.7 6C2V-A nrPDB 27 5.8 5DGX-A nrPDB 27 5.9 5LZT-jj nrPDB 27 6.6 5EUM-A nrPDB 27 6.6 2R3A-A nrPDB 27 6.7 2IF2-A nrPDB 27 7.0 4D61-i nrPDB 27 7.3 2ZBK-A nrPDB 27 7.6 1Z47-A nrPDB 27 7.8 6AMN-A nrPDB 27 7.8 5VY8-A nrPDB 26 8.9 3ZJC-A nrPDB 26 9.0 3PEN-A nrPDB 26 9.0 6N39-A nrPDB 26 9.1 >2ATX-A nrPDB Length = 194 Score = 275 bits (705), Expect = 7e-75, Method: Composition-based stats. Identities = 184/185 (99%), Positives = 185/185 (100%) Query: 1 MAHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLG 60 MAHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLG Sbjct: 10 MAHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLG 69 Query: 61 LYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIG 120 LYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIG Sbjct: 70 LYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIG 129 Query: 121 TQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAII 180 TQIDLRDDPKTLARLNDMKEKP+CVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAII Sbjct: 130 TQIDLRDDPKTLARLNDMKEKPICVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAII 189 Query: 181 AILTP 185 AILTP Sbjct: 190 AILTP 194 >3RYT-C nrPDB Length = 180 Score = 262 bits (671), Expect = 6e-71, Method: Composition-based stats. Identities = 116/180 (64%), Positives = 144/180 (80%) Query: 4 GPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYD 63 GP +KCVVVGDGAVGKTCLL+SY +AFP EY+PTVFD+Y+ +V V GK LGL+D Sbjct: 1 GPHMQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWD 60 Query: 64 TAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQI 123 TAG EDYDRLRPLSYP TDVFLICFS+V+PASF+NV+ +W PE++ + PN P +L+GT++ Sbjct: 61 TAGLEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKL 120 Query: 124 DLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAIL 183 DLRDD T+ +L + K P+ QG +AKEIGA Y+ECSALTQ+GLKTVFDEAI A+L Sbjct: 121 DLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVL 180 >5C2K-A nrPDB Length = 415 Score = 262 bits (670), Expect = 7e-71, Method: Composition-based stats. Identities = 99/193 (51%), Positives = 133/193 (68%) Query: 2 AHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGL 61 + G A+ K V+VGDGA GKTCLL+ ++ D FPE YVPTVF++Y + V GKQ L L Sbjct: 5 SSGMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELAL 64 Query: 62 YDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGT 121 +DTAGQEDYDRLRPLSYP TDV L+CFS+ +P S +N+ E+W PE+K + PNVP +L+G Sbjct: 65 WDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGN 124 Query: 122 QIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIA 181 + DLR+D T L MK++PV E+G+ +A IGA Y+ECSA T+ G++ VF+ A A Sbjct: 125 KKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRA 184 Query: 182 ILTPKKHTVKKRI 194 L ++ K Sbjct: 185 ALQARRGKKKSGC 197 >2J0V-A nrPDB Length = 212 Score = 262 bits (669), Expect = 1e-70, Method: Composition-based stats. Identities = 97/206 (47%), Positives = 144/206 (69%), Gaps = 6/206 (2%) Query: 2 AHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGL 61 +H + +KCV VGDGAVGKTC+L+ Y ++ FP +Y+PTVFD+++ +V V G+ LGL Sbjct: 2 SHMSVSKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDGQIVNLGL 61 Query: 62 YDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGT 121 +DTAGQEDY RLRPLSY D+F++ FS+++ AS++NV ++W+PEL+ +APNVP +L+GT Sbjct: 62 WDTAGQEDYSRLRPLSYRGADIFVLAFSLISKASYENVLKKWMPELRRFAPNVPIVLVGT 121 Query: 122 QIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIA 181 ++DLRDD LA + + QG++L K+IGA Y+ECS+ TQ+ +K VFD AI Sbjct: 122 KLDLRDDKGYLADHTN----VITSTQGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKV 177 Query: 182 ILTP--KKHTVKKRIGSRCINCCLIT 205 +L P +K ++R R C + + Sbjct: 178 VLQPPRRKEVPRRRKNHRRSGCSIAS 203 >3TH5-A nrPDB Length = 204 Score = 259 bits (663), Expect = 5e-70, Method: Composition-based stats. Identities = 115/174 (66%), Positives = 143/174 (82%) Query: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQED 69 +KCVVVGDGAVGKTCLL+SY +AFP EY+PTVFD+Y+ +V V GK LGL+DTAGQED Sbjct: 31 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQED 90 Query: 70 YDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDP 129 YDRLRPLSYP TDVFLICFS+V+PASF+NV+ +W PE++ + PN P +L+GT++DLRDD Sbjct: 91 YDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRDDK 150 Query: 130 KTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAIL 183 T+ +L + K P+ QG +AKEIGA Y+ECSALTQ+GLKTVFDEAI A+L Sbjct: 151 DTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVL 204 >5ZHX-e nrPDB Length = 198 Score = 257 bits (658), Expect = 2e-69, Method: Composition-based stats. Identities = 98/189 (51%), Positives = 131/189 (69%) Query: 6 GALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTA 65 A+ K V+VGDGA GKTCLL+ ++ D FPE YVPTVF++Y + V GKQ L L+DTA Sbjct: 7 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTA 66 Query: 66 GQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDL 125 GQEDYDRLRPLSYP TDV L+CFS+ +P S +N+ E+W PE+K + PNVP +L+G + DL Sbjct: 67 GQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL 126 Query: 126 RDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILTP 185 R+D T L MK++PV E+G+ +A IGA Y+ECSA T+ G++ VF+ A A L Sbjct: 127 RNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQA 186 Query: 186 KKHTVKKRI 194 ++ K Sbjct: 187 RRGKKKSGC 195 >2WKQ-A nrPDB Length = 332 Score = 257 bits (657), Expect = 3e-69, Method: Composition-based stats. Identities = 114/177 (64%), Positives = 143/177 (80%) Query: 9 MLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQE 68 ++KCVVVGDGAVGKTCLL+SY +AFP EY+PTVFD+Y+ +V V GK LGL+DTAG E Sbjct: 155 LIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGLE 214 Query: 69 DYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDD 128 DYDRLRPLSYP TDVFLICFS+V+PASF +V+ +W PE++ + PN P +L+GT++DLRDD Sbjct: 215 DYDRLRPLSYPQTDVFLICFSLVSPASFHHVRAKWYPEVRHHCPNTPIILVGTKLDLRDD 274 Query: 129 PKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILTP 185 T+ +L + K P+ QG +AKEIGA Y+ECSALTQ+GLKTVFDEAI A+L P Sbjct: 275 KDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVLCP 331 >3VHL-B nrPDB Length = 195 Score = 257 bits (656), Expect = 3e-69, Method: Composition-based stats. Identities = 124/193 (64%), Positives = 152/193 (78%) Query: 2 AHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGL 61 + G +KCVVVGDGAVGK CLL+SY + FP EYVPTVFD+YAV+V +GG+ Y LGL Sbjct: 3 SGSSGMQTIKCVVVGDGAVGKNCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGL 62 Query: 62 YDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGT 121 +DTAGQEDYDRLRPLSYP TDVFL+CFSVV+P+SF+NVKE+WVPE+ + P PFLL+GT Sbjct: 63 FDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGT 122 Query: 122 QIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIA 181 QIDLRDDP T+ +L K+KP+ E +KLA+++ A YVECSALTQKGLK VFDEAI+A Sbjct: 123 QIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILA 182 Query: 182 ILTPKKHTVKKRI 194 L P + +R Sbjct: 183 ALEPPEPKKSRRS 195 >2W2X-A nrPDB Length = 185 Score = 252 bits (645), Expect = 6e-68, Method: Composition-based stats. Identities = 112/180 (62%), Positives = 143/180 (79%) Query: 6 GALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTA 65 G+ +KCVVVGD AVGKTCLL+SY +AFP EY+PTVFD+Y+ +V V K LGL+DTA Sbjct: 6 GSQAIKCVVVGDVAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDSKPVNLGLWDTA 65 Query: 66 GQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDL 125 GQEDYDRLRPLSYP TDVFLICFS+V+PAS++NV+ +W PE++ + P+ P +L+GT++DL Sbjct: 66 GQEDYDRLRPLSYPQTDVFLICFSLVSPASYENVRAKWFPEVRHHCPSTPIILVGTKLDL 125 Query: 126 RDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILTP 185 RDD T+ +L + K P+ QG LAKEI + Y+ECSALTQ+GLKTVFDEAI A+L P Sbjct: 126 RDDKDTIEKLKEKKLAPITYPQGLALAKEIDSVKYLECSALTQRGLKTVFDEAIRAVLCP 185 >1RYH-A nrPDB Length = 203 Score = 252 bits (643), Expect = 1e-67, Method: Composition-based stats. Identities = 115/198 (58%), Positives = 143/198 (72%), Gaps = 19/198 (9%) Query: 7 ALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAG 66 +KCVVVGDGAVGKTCLL+SY +AFP EY+PTVFD+Y+ +V V GK LGL+DTAG Sbjct: 3 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG 62 Query: 67 QEDYDRLRPLSYPM-------------------TDVFLICFSVVNPASFQNVKEEWVPEL 107 QEDYDRLRPLSYP DVFLICFS+V+PASF+NV+ +W PE+ Sbjct: 63 QEDYDRLRPLSYPQTVGETYGKDITSRGKDKPIADVFLICFSLVSPASFENVRAKWYPEV 122 Query: 108 KEYAPNVPFLLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALT 167 + + PN P +L+GT++DLRDD T+ +L + K P+ QG +AKEIGA Y+ECSALT Sbjct: 123 RHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALT 182 Query: 168 QKGLKTVFDEAIIAILTP 185 Q+GLKTVFDEAI A+L P Sbjct: 183 QRGLKTVFDEAIRAVLCP 200 >5JCP-B nrPDB Length = 419 Score = 251 bits (642), Expect = 2e-67, Method: Composition-based stats. Identities = 97/181 (53%), Positives = 127/181 (70%) Query: 5 PGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDT 64 A+ K V+VGDGA GKTCLL+ + D FPE YVPTVF++Y + V GKQ L L+DT Sbjct: 239 SAAIRKKLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDT 298 Query: 65 AGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQID 124 AGQEDYDRLRPLSYP TDV L+CFS+ +P S +N+ E+W PE+K + PNVP +L+G + D Sbjct: 299 AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD 358 Query: 125 LRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILT 184 LR+D T L MK++PV E+G+ +A IGA Y+ECSA T+ G++ VF+ A A L Sbjct: 359 LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ 418 Query: 185 P 185 Sbjct: 419 A 419 >2NTY-C nrPDB Length = 180 Score = 245 bits (627), Expect = 8e-66, Method: Composition-based stats. Identities = 93/181 (51%), Positives = 133/181 (73%), Gaps = 2/181 (1%) Query: 5 PGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDT 64 + +KCV VGDGAVGKTC+L+SY ++ FP +YVPTVFD+++ +V V G LGL+DT Sbjct: 2 SASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDT 61 Query: 65 AGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQID 124 AGQEDY+RLRPLSY DVF++ FS+++ AS++NV ++W+PEL+ YAP VP +L+GT++D Sbjct: 62 AGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLD 121 Query: 125 LRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILT 184 LRDD + ++ P+ QG++L K IG+ Y+ECS+ TQ+ +K VFD AI +L Sbjct: 122 LRDDKQFF--IDHPGAVPITTNQGEELKKLIGSPIYIECSSKTQQNVKAVFDAAIKVVLQ 179 Query: 185 P 185 P Sbjct: 180 P 180 >3BWD-D nrPDB Length = 182 Score = 245 bits (626), Expect = 9e-66, Method: Composition-based stats. Identities = 95/184 (51%), Positives = 133/184 (72%), Gaps = 2/184 (1%) Query: 2 AHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGL 61 + +KCV VGDGAVGKTCLL+SY ++ FP +YVPTVFD+++ +V V G LGL Sbjct: 1 GSMSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGL 60 Query: 62 YDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGT 121 +DTAGQEDY+RLRPLSY DVF++ FS+++ AS++NV ++W+PELK YAP VP +L+GT Sbjct: 61 WDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGT 120 Query: 122 QIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIA 181 ++DLRDD + ++ P+ QG++L K IGA Y+ECS+ +Q+ +K VFD AI Sbjct: 121 KLDLRDDKQFF--IDHPGAVPITTVQGEELKKLIGAPAYIECSSKSQENVKGVFDAAIRV 178 Query: 182 ILTP 185 +L P Sbjct: 179 VLQP 182 >2WBL-C nrPDB Length = 180 Score = 245 bits (625), Expect = 1e-65, Method: Composition-based stats. Identities = 95/181 (52%), Positives = 130/181 (71%), Gaps = 2/181 (1%) Query: 5 PGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDT 64 A +KCV VGDGAVGKTC+L+SY + FP +YVPTVFD+++ +V V G LGL+DT Sbjct: 2 STARFIKCVTVGDGAVGKTCMLISYTGNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDT 61 Query: 65 AGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQID 124 AGQEDY+RLRPLSY DVFL+ FS+++ AS++N+ ++W+PELK YAP +P +L+GT++D Sbjct: 62 AGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWLPELKHYAPGIPIVLVGTKLD 121 Query: 125 LRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILT 184 LRDD + L + + QG++L K IGA Y+ECS+ TQ+ +K VFD AI L Sbjct: 122 LRDDKQFLK--DHPGAASITTAQGEELRKMIGAVRYLECSSKTQQNVKAVFDTAIRVALR 179 Query: 185 P 185 P Sbjct: 180 P 180 >2FV8-A nrPDB Length = 207 Score = 243 bits (622), Expect = 3e-65, Method: Composition-based stats. Identities = 95/183 (51%), Positives = 126/183 (68%) Query: 7 ALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAG 66 + K VVVGDGA GKTCLL+ ++ D FPE YVPTVF++Y + V GKQ L L+DTAG Sbjct: 23 MIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAG 82 Query: 67 QEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLR 126 QEDYDRLRPLSYP TDV L+CFSV +P S +N+ E+WVPE+K + PNVP +L+ + DLR Sbjct: 83 QEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLR 142 Query: 127 DDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILTPK 186 D L MK++PV + G+ +A I A Y+ECSA T++G++ VF+ A A L + Sbjct: 143 SDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQKR 202 Query: 187 KHT 189 + Sbjct: 203 YGS 205 >2J1L-A nrPDB Length = 214 Score = 243 bits (620), Expect = 4e-65, Method: Composition-based stats. Identities = 82/185 (44%), Positives = 113/185 (61%) Query: 5 PGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDT 64 PG +K V+VGDG GKT LLM +A+ AFPE Y PTVF+ Y V++ V GK L ++DT Sbjct: 30 PGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDT 89 Query: 65 AGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQID 124 AGQ+DYDRLRPL YP V L+CF V +P SF N+ W PE+ + VP +++G + D Sbjct: 90 AGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTD 149 Query: 125 LRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILT 184 LR D + +L +PV +GQ++A+ +GA Y+ECSA + VF EA L+ Sbjct: 150 LRKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALS 209 Query: 185 PKKHT 189 + Sbjct: 210 SRGRN 214 >3A58-B nrPDB Length = 188 Score = 238 bits (607), Expect = 2e-63, Method: Composition-based stats. Identities = 90/180 (50%), Positives = 126/180 (70%) Query: 7 ALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAG 66 ++ K V+VGDGA GKTCLL+ + FPE YVPTVF++Y V V G++ L L+DTAG Sbjct: 8 SIRRKLVIVGDGACGKTCLLIVNSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAG 67 Query: 67 QEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLR 126 QEDYDRLRPLSYP ++V LICFS+ P S +NV+E+W+ E+ + VP +L+G ++DLR Sbjct: 68 QEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLR 127 Query: 127 DDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILTPK 186 +DP+T+ +L ++PV ++GQ +A +IGA Y ECSA T G++ VF+ A A L K Sbjct: 128 NDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLMGK 187 >5ZVP-A nrPDB Length = 181 Score = 236 bits (603), Expect = 4e-63, Method: Composition-based stats. Identities = 91/173 (52%), Positives = 122/173 (70%) Query: 11 KCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDY 70 K V+VGDGA GKTCLL+ + FPE YVPTVF++Y V V GK L L+DTAGQEDY Sbjct: 7 KLVIVGDGACGKTCLLIVNSKGTFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDY 66 Query: 71 DRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDPK 130 DRLRPLSYP + V LICF++ +P S NV+E+W+ E+ + +P +L+G + DLR DPK Sbjct: 67 DRLRPLSYPDSHVILICFAIDSPDSLDNVQEKWISEVLHFCQGLPIILVGCKKDLRHDPK 126 Query: 131 TLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAIL 183 T+ L+ +KPV EQG+++ K+IGA Y+ECSA T +G++ VF+ A A L Sbjct: 127 TIEELHKTSQKPVTPEQGEEVRKKIGAYKYLECSARTNEGVREVFEAATRAAL 179 >4U5X-A nrPDB Length = 178 Score = 233 bits (594), Expect = 5e-62, Method: Composition-based stats. Identities = 90/177 (50%), Positives = 130/177 (73%), Gaps = 2/177 (1%) Query: 8 LMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQ 67 +KCV VGDGAVGKTC+L+ Y ++ FP +Y+PTVFD+++ +V+V G LGL+DTAG Sbjct: 4 RFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSVDGSVVNLGLWDTAGL 63 Query: 68 EDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRD 127 EDY RLRPLSY DVF++ FS+++ AS++NV+++W+PEL+ +AP VP +L+GT++DLR+ Sbjct: 64 EDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFAPGVPVVLVGTKLDLRE 123 Query: 128 DPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILT 184 D LA + + EQG++L K IGA Y+ECS+ TQ+ +K VFD AI +L Sbjct: 124 DRAYLA--DHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVVLQ 178 >5VCU-A nrPDB Length = 208 Score = 231 bits (590), Expect = 2e-61, Method: Composition-based stats. Identities = 96/197 (48%), Positives = 130/197 (65%), Gaps = 2/197 (1%) Query: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQED 69 +KCVVVGDGAVGKT LL++Y++ FPE+YVPTVFD+Y ++ G + LYDTAGQED Sbjct: 12 IKCVVVGDGAVGKTALLIAYSSGCFPEDYVPTVFDNYNKNIPYGDGIVSIALYDTAGQED 71 Query: 70 YDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDP 129 YDRLRPLSYP TDVFL+CFS+ NP S +N +W ELK Y P+ P +L+GT++DL+ D Sbjct: 72 YDRLRPLSYPDTDVFLVCFSLENPNSLENCHSKWAEELKHYNPDTPIVLVGTKLDLKKDE 131 Query: 130 KTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAIL--TPKK 187 + + +L + K PV EQGQ++ +I AC Y+ECSA T + L F+ AI + K Sbjct: 132 EYVKKLKEKKISPVTTEQGQEMKDKIKACGYIECSAKTMENLTEAFNMAIDIAMKQRLKD 191 Query: 188 HTVKKRIGSRCINCCLI 204 ++ C L+ Sbjct: 192 APPTANARNQKKKCQLL 208 >2Q3H-A nrPDB Length = 201 Score = 230 bits (587), Expect = 3e-61, Method: Composition-based stats. Identities = 99/172 (57%), Positives = 131/172 (76%) Query: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQED 69 +KCV+VGDGAVGKT L++SY + +P EY+PT FD+++ V+V G+ L L DTAGQ++ Sbjct: 21 VKCVLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNFSAVVSVDGRPVRLQLCDTAGQDE 80 Query: 70 YDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDP 129 +D+LRPL Y TD+FL+CFSVV+P+SFQNV E+WVPE++ + P P +L+GTQ DLR+D Sbjct: 81 FDKLRPLCYTNTDIFLLCFSVVSPSSFQNVSEKWVPEIRCHCPKAPIILVGTQSDLREDV 140 Query: 130 KTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIA 181 K L L+ KEKPV E + LA+EI A Y+ECSALTQK LK VFD AI+A Sbjct: 141 KVLIELDKCKEKPVPEEAAKLLAEEIKAASYIECSALTQKNLKEVFDAAIVA 192 >4MIT-A nrPDB Length = 186 Score = 225 bits (574), Expect = 1e-59, Method: Composition-based stats. Identities = 94/185 (50%), Positives = 128/185 (69%), Gaps = 2/185 (1%) Query: 1 MAHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLG 60 M+ P + +K VVVGDGAVGKTCLL+SY+ FPE+Y+PTVFD+Y VS+T G +Q L Sbjct: 4 MSEKPTS--IKLVVVGDGAVGKTCLLISYSIRKFPEDYIPTVFDNYVVSLTAGTRQIQLA 61 Query: 61 LYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIG 120 L+DTAG E+YD+LRPLSY +FLICFSV + S+ NV +W PE+ +AP VP +L+G Sbjct: 62 LWDTAGLEEYDQLRPLSYSSASIFLICFSVTSSVSYDNVITKWHPEVIHFAPKVPIILVG 121 Query: 121 TQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAII 180 T++D R+DP + RL + + +G++L I A Y+ECSA T + LKTVFDEA+ Sbjct: 122 TKLDTRNDPAIVKRLTEQGMTVINTAKGEELKNRIKAVKYIECSAKTSENLKTVFDEAVK 181 Query: 181 AILTP 185 +L Sbjct: 182 TVLMN 186 >2RHD-A nrPDB Length = 175 Score = 219 bits (558), Expect = 7e-58, Method: Composition-based stats. Identities = 51/179 (28%), Positives = 90/179 (50%), Gaps = 16/179 (8%) Query: 6 GALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVF-DHYAVSVTVGGKQYLLGLYDT 64 + K +++GD VGK+CLL+ +A+D + + Y+ T+ D ++++ K L ++DT Sbjct: 6 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTISLENKTVKLQIWDT 65 Query: 65 AGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIGTQI 123 AGQE + + Y +I + V + SF NVK+ W+ E+ YA NV LL+G + Sbjct: 66 AGQERFRTITSSYYRGAHGIIIVYDVTDRDSFDNVKQ-WIQEIDRYAMENVNKLLVGNKC 124 Query: 124 DLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI 182 DL + ++ V ++G++LA G ++E SA ++ F I Sbjct: 125 DL------------VSKRVVTSDEGRELADSHG-IKFIETSAKNAYNVEQAFHTMAGEI 170 >5FBL-B nrPDB Length = 221 Score = 217 bits (554), Expect = 2e-57, Method: Composition-based stats. Identities = 50/195 (25%), Positives = 89/195 (45%), Gaps = 18/195 (9%) Query: 6 GALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYA-VSVTVGGKQYLLGLYDT 64 + K V++GD VGK+ LL + + F E T+ +A S+ V GK ++DT Sbjct: 13 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 72 Query: 65 AGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAP-NVPFLLIGTQI 123 AGQE Y + Y L+ + + +++NV E W+ EL+++A N+ +L+G + Sbjct: 73 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHADSNIVIMLVGNKS 131 Query: 124 DLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAIL 183 DLR + V ++ + A++ G ++E SAL ++ F + I Sbjct: 132 DLR------------HLRAVPTDEARAFAEKNG-LSFIETSALDSTNVEAAFQTILTEIY 178 Query: 184 T--PKKHTVKKRIGS 196 +K +R Sbjct: 179 RIVSQKQMSDRREND 193 >5SZI-A nrPDB Length = 209 Score = 216 bits (551), Expect = 4e-57, Method: Composition-based stats. Identities = 47/192 (24%), Positives = 92/192 (47%), Gaps = 16/192 (8%) Query: 2 AHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVF-DHYAVSVTVGGKQYLLG 60 + K +++GD VGKTC+L ++ DAF ++ T+ D ++ + GK+ L Sbjct: 3 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQ 62 Query: 61 LYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAP-NVPFLLI 119 ++DTAGQE + + Y ++ + + N SF N++ W+ ++E+A +V +++ Sbjct: 63 IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIR-NWIRNIEEHASADVEKMIL 121 Query: 120 GTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAI 179 G + D+ D ++ V E+G+KLA + G ++E SA ++ F Sbjct: 122 GNKCDVND------------KRQVSKERGEKLALDYG-IKFMETSAKANINVENAFFTLA 168 Query: 180 IAILTPKKHTVK 191 I ++ Sbjct: 169 RDIKAKMDKKLE 180 >4LHX-A nrPDB Length = 186 Score = 216 bits (550), Expect = 6e-57, Method: Composition-based stats. Identities = 47/192 (24%), Positives = 92/192 (47%), Gaps = 16/192 (8%) Query: 2 AHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVF-DHYAVSVTVGGKQYLLG 60 + K +++GD VGKTC+L ++ DAF ++ T+ D ++ + GK+ L Sbjct: 3 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQ 62 Query: 61 LYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAP-NVPFLLI 119 ++DTAGQE + + Y ++ + + N SF N++ W+ ++E+A +V +++ Sbjct: 63 IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIR-NWIRNIEEHASADVEKMIL 121 Query: 120 GTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAI 179 G + D+ D ++ V E+G+KLA + G ++E SA ++ F Sbjct: 122 GNKCDVND------------KRQVSKERGEKLALDYG-IKFMETSAKANINVENAFFTLA 168 Query: 180 IAILTPKKHTVK 191 I ++ Sbjct: 169 RDIKAKMDKKLE 180 >5SZJ-A nrPDB Length = 202 Score = 215 bits (547), Expect = 2e-56, Method: Composition-based stats. Identities = 51/187 (27%), Positives = 94/187 (50%), Gaps = 16/187 (8%) Query: 1 MAHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVF-DHYAVSVTVGGKQYLL 59 MA L+ K +++GD VGKTC+L +++DAF ++ T+ D +V + GK+ L Sbjct: 3 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 62 Query: 60 GLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLL 118 ++DTAGQE + + Y ++ + + N SF+N+ +W+ + E+A +V +L Sbjct: 63 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENIS-KWLRNIDEHANEDVERML 121 Query: 119 IGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEA 178 +G + D+ D ++ V +G+++A+E G + E SA ++ F Sbjct: 122 LGNKCDMDD------------KRVVPKGKGEQIAREHG-IRFFETSAKANINIEKAFLTL 168 Query: 179 IIAILTP 185 IL Sbjct: 169 AEDILRK 175 >3L0I-B nrPDB Length = 199 Score = 214 bits (546), Expect = 2e-56, Method: Composition-based stats. Identities = 51/179 (28%), Positives = 86/179 (48%), Gaps = 16/179 (8%) Query: 6 GALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVF-DHYAVSVTVGGKQYLLGLYDT 64 + K +++GD VGK+CLL+ +A+D + E Y+ T+ D ++ + GK L ++DT Sbjct: 30 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 89 Query: 65 AGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIGTQI 123 AGQE + + Y ++ + V + SF NVK+ W+ E+ YA NV LL+G + Sbjct: 90 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYASENVNKLLVGNKC 148 Query: 124 DLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI 182 DL +K V ++ A +G ++E SA ++ F I Sbjct: 149 DL------------TTKKVVDYTTAKEFADSLG-IPFLETSAKNATNVEQSFMTMAAEI 194 >6IF2-B nrPDB Length = 186 Score = 213 bits (544), Expect = 3e-56, Method: Composition-based stats. Identities = 52/194 (26%), Positives = 93/194 (47%), Gaps = 16/194 (8%) Query: 1 MAHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVF-DHYAVSVTVGGKQYLL 59 MA + K +++GD VGK+ LL+ +A++ F Y+ T+ D +V + G++ L Sbjct: 7 MAR-DYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKL 65 Query: 60 GLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLI 119 ++DTAG E + + Y T ++ + V + SF NVK W+ E+ + +V +L+ Sbjct: 66 QIWDTAGLERFRTITSTYYRGTHGVIVVYDVTSAESFVNVK-RWLHEINQNCDDVCRILV 124 Query: 120 GTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAI 179 G + D D + K V E K A ++G + E SA ++ +F+ Sbjct: 125 GNKND------------DPERKVVETEDAYKFAGQMGIQLF-ETSAKENVNVEEMFNCIT 171 Query: 180 IAILTPKKHTVKKR 193 +L KK + K+ Sbjct: 172 ELVLRAKKDNLAKQ 185 >5SZH-B nrPDB Length = 203 Score = 213 bits (544), Expect = 3e-56, Method: Composition-based stats. Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 16/179 (8%) Query: 6 GALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVF-DHYAVSVTVGGKQYLLGLYDT 64 + K +++GD VGK+CLL+ +A+D + E Y+ T+ D ++ + GK L ++DT Sbjct: 7 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 66 Query: 65 AGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIGTQI 123 AGQE + + Y ++ + V + S+ NVK+ W+ E+ YA NV LL+G + Sbjct: 67 AGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYASENVNKLLVGNKS 125 Query: 124 DLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI 182 DL +K V ++ A +G ++E SA ++ F I Sbjct: 126 DL------------TTKKVVDNTTAKEFADSLG-IPFLETSAKNATNVEQAFMTMAAEI 171 >5LPN-A nrPDB Length = 177 Score = 213 bits (543), Expect = 4e-56, Method: Composition-based stats. Identities = 51/187 (27%), Positives = 94/187 (50%), Gaps = 16/187 (8%) Query: 1 MAHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVF-DHYAVSVTVGGKQYLL 59 MA L+ K +++GD VGKTC+L +++DAF ++ T+ D +V + GK+ L Sbjct: 3 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 62 Query: 60 GLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLL 118 ++DTAGQE + + Y ++ + + N SF+N+ +W+ + E+A +V +L Sbjct: 63 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENIS-KWLRNIDEHANEDVERML 121 Query: 119 IGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEA 178 +G + D+ D ++ V +G+++A+E G + E SA ++ F Sbjct: 122 LGNKCDMDD------------KRVVPKGKGEQIAREHG-IRFFETSAKANINIEKAFLTL 168 Query: 179 IIAILTP 185 IL Sbjct: 169 AEDILRK 175 >4QXA-A nrPDB Length = 208 Score = 213 bits (542), Expect = 5e-56, Method: Composition-based stats. Identities = 56/195 (28%), Positives = 90/195 (46%), Gaps = 21/195 (10%) Query: 1 MAHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHY-AVSVTVGGKQYLL 59 M G + + K +++GDG VGK+ L+ Y + F + T+ + + V G + Sbjct: 1 MMAGKSS-LFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTM 59 Query: 60 GLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAP-----NV 114 ++DTAG E + LR Y +D L+ FSV + SFQN+ W E YA + Sbjct: 60 QIWDTAGLERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLS-NWKKEFIYYADVKEPESF 118 Query: 115 PFLLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTV 174 PF+++G + D+ KE+ V E+ Q K+ G Y E SA + Sbjct: 119 PFVILGNKTDI-------------KERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAA 165 Query: 175 FDEAIIAILTPKKHT 189 F+EA+ IL + + Sbjct: 166 FEEAVRRILATEDRS 180 >2F9L-A nrPDB Length = 199 Score = 213 bits (542), Expect = 5e-56, Method: Composition-based stats. Identities = 51/195 (26%), Positives = 90/195 (46%), Gaps = 19/195 (9%) Query: 6 GALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYA-VSVTVGGKQYLLGLYDT 64 + K V++GD VGK+ LL + + F E T+ +A S+ V GK ++DT Sbjct: 2 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 61 Query: 65 AGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAP-NVPFLLIGTQI 123 AGQE Y R+ Y L+ + + +++NV E W+ EL+++A N+ +L+G + Sbjct: 62 AGQERYRRITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHADSNIVIMLVGNKS 120 Query: 124 DLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAIL 183 DLR + V ++ + A++ ++E SAL ++ F + I Sbjct: 121 DLR------------HLRAVPTDEARAFAEK-NNLSFIETSALDSTNVEEAFKNILTEIY 167 Query: 184 TPKKHTVKKRIGSRC 198 +K+I R Sbjct: 168 RI---VSQKQIADRA 179 >1GWN-A nrPDB Length = 205 Score = 212 bits (541), Expect = 7e-56, Method: Composition-based stats. Identities = 77/180 (42%), Positives = 112/180 (62%), Gaps = 1/180 (0%) Query: 5 PGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDT 64 + K VVVGD GKT LL +A D FPE YVPTVF++Y S + ++ L L+DT Sbjct: 24 NQNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDT 83 Query: 65 AGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQID 124 +G YD +RPLSYP +D LICF + P + +V ++W E++E+ PN LL+G + D Sbjct: 84 SGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSD 143 Query: 125 LRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKG-LKTVFDEAIIAIL 183 LR D TL L++ ++ PV +QG +AK+IGA Y+ECSAL + ++ +F A +A + Sbjct: 144 LRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLACV 203 >5CM8-B nrPDB Length = 203 Score = 212 bits (540), Expect = 9e-56, Method: Composition-based stats. Identities = 67/215 (31%), Positives = 106/215 (49%), Gaps = 25/215 (11%) Query: 1 MAHGP--GALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYL 58 M+ P G + K ++VG G VGK+ L + + D F E+Y PT D Y V + G++ Sbjct: 3 MSKKPTAGPALHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQ 62 Query: 59 LGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKE--EWVPELKEYAPNVPF 116 + + DTAGQEDY +R + + FL FS+ + SFQ +E E + +K ++PF Sbjct: 63 IDILDTAGQEDYAAIRDNYFRSGEGFLCVFSITDDESFQATQEFREQILRVK-NDESIPF 121 Query: 117 LLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFD 176 LL+G + DL D ++ V + + Q A++ A YVE SA T++ + VF Sbjct: 122 LLVGNKCDLND------------KRKVPLSECQLRAQQW-AVPYVETSAKTRENVDKVFF 168 Query: 177 EAIIAILTPKKH-------TVKKRIGSRCINCCLI 204 + + I + K K R R + C L+ Sbjct: 169 DLMREIRSRKTEDSKATSGRAKDRCKKRRLKCTLL 203 >2A5J-A nrPDB Length = 191 Score = 212 bits (539), Expect = 1e-55, Method: Composition-based stats. Identities = 46/185 (24%), Positives = 87/185 (47%), Gaps = 16/185 (8%) Query: 6 GALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHY-AVSVTVGGKQYLLGLYDT 64 G+ + K +++GD VGK+CLL+ + + F + T+ + A V + GKQ L ++DT Sbjct: 18 GSYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDT 77 Query: 65 AGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEY-APNVPFLLIGTQI 123 AGQE + + Y L+ + + +F ++ W+ + +++ + N+ +LIG + Sbjct: 78 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHL-TSWLEDARQHSSSNMVIMLIGNKS 136 Query: 124 DLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAIL 183 DL + V E+G+ A+E G ++E SA T ++ F I Sbjct: 137 DLE------------SRRDVKREEGEAFAREHG-LIFMETSAKTACNVEEAFINTAKEIY 183 Query: 184 TPKKH 188 + Sbjct: 184 RKIQQ 188 >1M7B-A nrPDB Length = 184 Score = 212 bits (539), Expect = 1e-55, Method: Composition-based stats. Identities = 77/180 (42%), Positives = 112/180 (62%), Gaps = 1/180 (0%) Query: 5 PGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDT 64 + K VVVGD GKT LL +A D FPE YVPTVF++Y S + ++ L L+DT Sbjct: 3 NQNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDT 62 Query: 65 AGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQID 124 +G YD +RPLSYP +D LICF + P + +V ++W E++E+ PN LL+G + D Sbjct: 63 SGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSD 122 Query: 125 LRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKG-LKTVFDEAIIAIL 183 LR D TL L++ ++ PV +QG +AK+IGA Y+ECSAL + ++ +F A +A + Sbjct: 123 LRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLACV 182 >1Z0A-A nrPDB Length = 174 Score = 210 bits (536), Expect = 2e-55, Method: Composition-based stats. Identities = 46/179 (25%), Positives = 86/179 (48%), Gaps = 16/179 (8%) Query: 6 GALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHY-AVSVTVGGKQYLLGLYDT 64 A + K +++GD VGK+CLL+ + + F + T+ + A +T+ GKQ L ++DT Sbjct: 7 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 66 Query: 65 AGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIGTQI 123 AGQE + + Y L+ + + +F ++ W+ + ++++ N+ +LIG + Sbjct: 67 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHL-TTWLEDARQHSNSNMVIMLIGNKS 125 Query: 124 DLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI 182 DL + V E+G+ A+E G ++E SA T ++ F I Sbjct: 126 DLE------------SRREVKKEEGEAFAREHG-LIFMETSAKTASNVEEAFINTAKEI 171 >4M8N-E nrPDB Length = 199 Score = 210 bits (535), Expect = 4e-55, Method: Composition-based stats. Identities = 55/181 (30%), Positives = 92/181 (50%), Gaps = 15/181 (8%) Query: 4 GPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYD 63 GP K VV+G G VGK+ L + + F E+Y PT+ D Y V V +Q +L + D Sbjct: 1 GPHMREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILD 60 Query: 64 TAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVK--EEWVPELKEYAPNVPFLLIGT 121 TAG E + +R L F + +S+ ++F +++ E + +K+ +VP +L+G Sbjct: 61 TAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKD-TDDVPMILVGN 119 Query: 122 QIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIA 181 + DL D E+ V EQGQ LA++ C ++E SA ++ + +F + + Sbjct: 120 KCDLED------------ERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQ 167 Query: 182 I 182 I Sbjct: 168 I 168 >1ZBD-A nrPDB Length = 203 Score = 210 bits (534), Expect = 4e-55, Method: Composition-based stats. Identities = 52/187 (27%), Positives = 89/187 (47%), Gaps = 16/187 (8%) Query: 7 ALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVF-DHYAVSVTVGGKQYLLGLYDTA 65 M K +++G+ +VGKT L YA+D+F +V TV D ++ K+ L ++DTA Sbjct: 6 DYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTA 65 Query: 66 GQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIGTQID 124 G E Y + Y F++ + + N SF N ++W ++K Y+ N LL+G + D Sbjct: 66 GLERYRTITTAYYRGAMGFILMYDITNEESF-NAVQDWSTQIKTYSWDNAQVLLVGNKCD 124 Query: 125 LRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILT 184 + D E+ V E+G++LA +G + E SA +K F+ + I Sbjct: 125 MED------------ERVVSSERGRQLADHLGFE-FFEASAKDNINVKQTFERLVDVICE 171 Query: 185 PKKHTVK 191 ++ Sbjct: 172 KMSESLD 178 >3CPH-A nrPDB Length = 213 Score = 210 bits (534), Expect = 5e-55, Method: Composition-based stats. Identities = 49/181 (27%), Positives = 87/181 (48%), Gaps = 17/181 (9%) Query: 4 GPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVF-DHYAVSVTVGGKQYLLGLY 62 ++K +++GD VGK+CLL+ + D F ++ T+ D +V + GK+ L L+ Sbjct: 15 KSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLW 74 Query: 63 DTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPN-VPFLLIGT 121 DTAGQE + + Y ++ + V + +F N+K+ W + E+A + LL+G Sbjct: 75 DTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQ-WFKTVNEHANDEAQLLLVGN 133 Query: 122 QIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIA 181 + D+ + V +QG+ LAKE+G ++E SA + +F Sbjct: 134 KSDMET-------------RVVTADQGEALAKELG-IPFIESSAKNDDNVNEIFFTLAKL 179 Query: 182 I 182 I Sbjct: 180 I 180 >4UJ4-A nrPDB Length = 185 Score = 209 bits (533), Expect = 6e-55, Method: Composition-based stats. Identities = 49/195 (25%), Positives = 89/195 (45%), Gaps = 19/195 (9%) Query: 6 GALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYA-VSVTVGGKQYLLGLYDT 64 + K V++GD VGK+ LL + + F E T+ +A S+ V GK ++DT Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 66 Query: 65 AGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAP-NVPFLLIGTQI 123 AG E Y + Y L+ + + +++NV E W+ EL+++A N+ +L+G + Sbjct: 67 AGLERYRAITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHADSNIVIMLVGNKS 125 Query: 124 DLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAIL 183 DLR + V ++ + A++ G ++E SAL ++ F + I Sbjct: 126 DLR------------HLRAVPTDEARAFAEKNG-LSFIETSALDSTNVEAAFQTILTEIY 172 Query: 184 TPKKHTVKKRIGSRC 198 +K++ R Sbjct: 173 RI---VSQKQMSDRR 184 >3DZ8-A nrPDB Length = 191 Score = 209 bits (532), Expect = 7e-55, Method: Composition-based stats. Identities = 54/189 (28%), Positives = 91/189 (48%), Gaps = 16/189 (8%) Query: 3 HGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVF-DHYAVSVTVGGKQYLLGL 61 G M K +++G+ +VGKT L YA+D F +V TV D +V K+ L + Sbjct: 17 QGNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQI 76 Query: 62 YDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIG 120 +DTAGQE Y + Y F++ + + N SF N ++W ++K Y+ N +L+G Sbjct: 77 WDTAGQERYRTITTAYYRGAMGFILMYDITNEESF-NAVQDWATQIKTYSWDNAQVILVG 135 Query: 121 TQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAII 180 + D+ + E+ V E+GQ LA+++G + E SA ++ F+ + Sbjct: 136 NKCDMEE------------ERVVPTEKGQLLAEQLGF-DFFEASAKENISVRQAFERLVD 182 Query: 181 AILTPKKHT 189 AI + Sbjct: 183 AICDKMSDS 191 >3CUE-F nrPDB Length = 206 Score = 209 bits (532), Expect = 8e-55, Method: Composition-based stats. Identities = 47/190 (24%), Positives = 88/190 (46%), Gaps = 16/190 (8%) Query: 2 AHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVF-DHYAVSVTVGGKQYLLG 60 + + K +++G+ VGK+CLL+ +++D + +Y+ T+ D +V + GK L Sbjct: 1 MNSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQ 60 Query: 61 LYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPF-LLI 119 ++DTAGQE + + Y + +I + V + SF VK W+ E+ YA + LL+ Sbjct: 61 IWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVK-MWLQEIDRYATSTVLKLLV 119 Query: 120 GTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAI 179 G + DL+D ++ V + ++ A + ++E SAL ++ F Sbjct: 120 GNKCDLKD------------KRVVEYDVAKEFA-DANKMPFLETSALDSTNVEDAFLTMA 166 Query: 180 IAILTPKKHT 189 I Sbjct: 167 RQIKESMSQQ 176 >1WMS-A nrPDB Length = 177 Score = 209 bits (532), Expect = 8e-55, Method: Composition-based stats. Identities = 53/187 (28%), Positives = 88/187 (47%), Gaps = 20/187 (10%) Query: 7 ALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHY-AVSVTVGGKQYLLGLYDTA 65 + + K +++GDG VGK+ L+ Y + F + T+ + + V G + ++DTA Sbjct: 5 SSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTA 64 Query: 66 GQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAP-----NVPFLLIG 120 GQE + LR Y +D L+ FSV + SFQN+ W E YA + PF+++G Sbjct: 65 GQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLS-NWKKEFIYYADVKEPESFPFVILG 123 Query: 121 TQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAII 180 +ID+ E+ V E+ Q ++ G Y E SA + F+EA+ Sbjct: 124 NKIDIS-------------ERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVR 170 Query: 181 AILTPKK 187 +L + Sbjct: 171 RVLATED 177 >6O62-A nrPDB Length = 184 Score = 209 bits (532), Expect = 9e-55, Method: Composition-based stats. Identities = 49/179 (27%), Positives = 89/179 (49%), Gaps = 16/179 (8%) Query: 6 GALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVF-DHYAVSVTVGGKQYLLGLYDT 64 +++K ++VGD VGK+CLL+ + D F ++ T+ D ++ GK+ L ++DT Sbjct: 11 YDMIMKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKRIKLQVWDT 70 Query: 65 AGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIGTQI 123 AGQE + + Y ++ + V + SF+NV E W + ++A + L+G + Sbjct: 71 AGQERFRTITTAYYRGAMGIVLIYDVTDSRSFENV-ENWFQTVTQHANEDAQIFLVGNKC 129 Query: 124 DLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI 182 D D + V EQGQ+LA ++ ++E SA + + + ++F E I Sbjct: 130 D------------DEVNRQVSKEQGQELAAKLN-VPFLEASAKSNENVDSIFYELASII 175 >2OCB-A nrPDB Length = 180 Score = 208 bits (531), Expect = 9e-55, Method: Composition-based stats. Identities = 57/192 (29%), Positives = 92/192 (47%), Gaps = 21/192 (10%) Query: 4 GPG-ALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHY-AVSVTVGGKQYLLGL 61 G G +L+LK +++GDG VGK+ L+ Y + F + T+ + + V G+ L + Sbjct: 1 GSGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQI 60 Query: 62 YDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAP-----NVPF 116 +DTAGQE + LR Y D L+ FSV + SF+N+ W E YA + PF Sbjct: 61 WDTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLG-NWQKEFIYYADVKDPEHFPF 119 Query: 117 LLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFD 176 +++G ++D D + V E+ Q E G Y+E SA + F+ Sbjct: 120 VVLGNKVDKED-------------RQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFE 166 Query: 177 EAIIAILTPKKH 188 EA+ +L ++ Sbjct: 167 EAVRQVLAVEEQ 178 >2WWX-A nrPDB Length = 175 Score = 208 bits (531), Expect = 1e-54, Method: Composition-based stats. Identities = 51/179 (28%), Positives = 86/179 (48%), Gaps = 16/179 (8%) Query: 6 GALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVF-DHYAVSVTVGGKQYLLGLYDT 64 + K +++GD VGK+CLL+ +A+D + E Y+ T+ D ++ + GK L ++DT Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64 Query: 65 AGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIGTQI 123 AGQE + + Y ++ + V + SF NVK+ W+ E+ YA NV LL+G + Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYASENVNKLLVGIKC 123 Query: 124 DLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI 182 DL +K V ++ A +G ++E SA ++ F I Sbjct: 124 DL------------TTKKVVDYTTAKEFADSLG-IPFLETSAKNATNVEQSFMTMAAEI 169 >1YZN-A nrPDB Length = 185 Score = 208 bits (530), Expect = 1e-54, Method: Composition-based stats. Identities = 47/179 (26%), Positives = 87/179 (48%), Gaps = 16/179 (8%) Query: 6 GALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVF-DHYAVSVTVGGKQYLLGLYDT 64 + K +++G+ VGK+CLL+ +++D + +Y+ T+ D +V + GK L ++DT Sbjct: 18 YDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDT 77 Query: 65 AGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPF-LLIGTQI 123 AGQE + + Y + +I + V + SF VK W+ E+ YA + LL+G + Sbjct: 78 AGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVK-MWLQEIDRYATSTVLKLLVGNKC 136 Query: 124 DLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI 182 DL+D ++ V + ++ A + ++E SAL ++ F I Sbjct: 137 DLKD------------KRVVEYDVAKEFA-DANKMPFLETSALDSTNVEDAFLTMARQI 182 >3CPJ-B nrPDB Length = 223 Score = 208 bits (529), Expect = 2e-54, Method: Composition-based stats. Identities = 51/183 (27%), Positives = 83/183 (45%), Gaps = 16/183 (8%) Query: 5 PGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYA-VSVTVGGKQYLLGLYD 63 L+ K V++GD VGK+ LL + + F + T+ +A ++ + GK+ ++D Sbjct: 9 DYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIEGKRIKAQIWD 68 Query: 64 TAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIGTQ 122 TAGQE Y + Y LI + + +S++N W+ EL+E A NV LIG + Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENC-NHWLSELRENADDNVAVGLIGNK 127 Query: 123 IDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI 182 DL + V E+ + A+E + E SAL + + F+E I I Sbjct: 128 SDL------------AHLRAVPTEESKTFAQE-NQLLFTETSALNSENVDKAFEELINTI 174 Query: 183 LTP 185 Sbjct: 175 YQK 177 >2GF9-A nrPDB Length = 189 Score = 207 bits (528), Expect = 2e-54, Method: Composition-based stats. Identities = 56/178 (31%), Positives = 89/178 (50%), Gaps = 16/178 (8%) Query: 7 ALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVF-DHYAVSVTVGGKQYLLGLYDTA 65 M K +++G+ +VGKT L YA+D+F +V TV D +V K+ L ++DTA Sbjct: 20 DYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTA 79 Query: 66 GQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIGTQID 124 GQE Y + Y FL+ + + N SF V ++W ++K Y+ N +L+G + D Sbjct: 80 GQERYRTITTAYYRGAMGFLLMYDIANQESFAAV-QDWATQIKTYSWDNAQVILVGNKCD 138 Query: 125 LRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI 182 L D E+ V E G++LA ++G + E SA +K VF+ + I Sbjct: 139 LED------------ERVVPAEDGRRLADDLGFE-FFEASAKENINVKQVFERLVDVI 183 >1Z0F-A nrPDB Length = 179 Score = 207 bits (526), Expect = 4e-54, Method: Composition-based stats. Identities = 43/183 (23%), Positives = 84/183 (45%), Gaps = 16/183 (8%) Query: 5 PGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHY-AVSVTVGGKQYLLGLYD 63 + + K +++GD VGK+CLL + F + T+ + + V G++ L ++D Sbjct: 11 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 70 Query: 64 TAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIGTQ 122 TAGQE + + Y L+ + + +++ ++ W+ + + PN +LIG + Sbjct: 71 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLS-SWLTDARNLTNPNTVIILIGNK 129 Query: 123 IDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI 182 DL ++ V E+ ++ A+E G ++E SA T + ++ F EA I Sbjct: 130 ADLEA------------QRDVTYEEAKQFAEENG-LLFLEASAKTGENVEDAFLEAAKKI 176 Query: 183 LTP 185 Sbjct: 177 YQN 179 >6HUF-A nrPDB Length = 182 Score = 207 bits (526), Expect = 4e-54, Method: Composition-based stats. Identities = 53/194 (27%), Positives = 88/194 (45%), Gaps = 17/194 (8%) Query: 2 AHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVF-DHYAVSVTVGGKQYLLG 60 + G ++K + +GD VGKT +L Y + F +++ TV D ++ K+ L Sbjct: 2 SDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKTIYRNDKRIKLQ 61 Query: 61 LYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA--PNVPFLL 118 L+DTAG E + L + FL+ F + N SF NV+ W+ +LK +A N +L Sbjct: 62 LWDTAGLERFRSLTTAFFRDAMGFLLLFDLTNEESFLNVR-NWISQLKTHAYSENPDIVL 120 Query: 119 IGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEA 178 G + DL D E+ V + ++LA+ G Y E SA + + Sbjct: 121 CGNKSDLED------------ERVVAAAEARQLAEHYG-IPYFETSAANGTNISQAIEML 167 Query: 179 IIAILTPKKHTVKK 192 + I+ + +V K Sbjct: 168 LDLIMKRMERSVDK 181 >4RKE-A nrPDB Length = 176 Score = 207 bits (526), Expect = 4e-54, Method: Composition-based stats. Identities = 45/180 (25%), Positives = 85/180 (47%), Gaps = 16/180 (8%) Query: 5 PGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHY-AVSVTVGGKQYLLGLYD 63 A + K +++GD VGK+CLL+ + + F + T+ + A +T+ GKQ L ++D Sbjct: 6 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 65 Query: 64 TAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIGTQ 122 TAG E + + Y L+ + + +F ++ W+ + ++++ N+ +LIG + Sbjct: 66 TAGLEAFRSITRSYYRGAAGALLVYDITRRETFNHL-TTWLEDARQHSNSNMVIMLIGNK 124 Query: 123 IDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI 182 DL + V E+G+ A+E G ++E SA T ++ F I Sbjct: 125 SDLD------------SRREVKKEEGEAFAREHGLV-FMETSARTAANVEEAFINTAKEI 171 >2OCY-C nrPDB Length = 170 Score = 206 bits (525), Expect = 5e-54, Method: Composition-based stats. Identities = 49/176 (27%), Positives = 87/176 (49%), Gaps = 17/176 (9%) Query: 9 MLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVF-DHYAVSVTVGGKQYLLGLYDTAGQ 67 ++K +++GD VGK+CLL+ + D F ++ T+ D +V + GK+ L L+DTAGQ Sbjct: 3 IMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQ 62 Query: 68 EDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPN-VPFLLIGTQIDLR 126 E + + Y ++ + V + +F N+K+ W + E+A + LL+G + D+ Sbjct: 63 ERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQ-WFKTVNEHANDEAQLLLVGNKSDME 121 Query: 127 DDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI 182 + V +QG+ LAKE+G ++E SA + +F I Sbjct: 122 T-------------RVVTADQGEALAKELG-IPFIESSAKNDDNVNEIFFTLAKLI 163 >3RAB-A nrPDB Length = 169 Score = 206 bits (525), Expect = 5e-54, Method: Composition-based stats. Identities = 53/180 (29%), Positives = 88/180 (48%), Gaps = 16/180 (8%) Query: 5 PGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVF-DHYAVSVTVGGKQYLLGLYD 63 M K +++G+ +VGKT L YA+D+F +V TV D ++ K+ L ++D Sbjct: 1 NFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWD 60 Query: 64 TAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIGTQ 122 TAGQE Y + Y F++ + + N SF N ++W ++K Y+ N LL+G + Sbjct: 61 TAGQERYRTITTAYYRGAMGFILMYDITNEESF-NAVQDWSTQIKTYSWDNAQVLLVGNK 119 Query: 123 IDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI 182 D+ D E+ V E+G++LA +G + E SA +K F+ + I Sbjct: 120 CDMED------------ERVVSSERGRQLADHLGFE-FFEASAKDNINVKQTFERLVDVI 166 >2F7S-A nrPDB Length = 217 Score = 206 bits (524), Expect = 6e-54, Method: Composition-based stats. Identities = 54/204 (26%), Positives = 90/204 (44%), Gaps = 27/204 (13%) Query: 2 AHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVF-DHYAVSVTVGGK----- 55 G ++K + +GD VGKT L Y ++ F +++ TV D V + Sbjct: 18 GSGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGS 77 Query: 56 -----QYLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELK-- 108 + L L+DTAGQE + L + FL+ F + + SF NV+ W+ +L+ Sbjct: 78 SGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVR-NWMSQLQAN 136 Query: 109 EYAPNVPFLLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQ 168 Y N +LIG + DL D ++ V Q ++LA + G Y E SA T Sbjct: 137 AYCENPDIVLIGNKADLPD------------QREVNERQARELADKYG-IPYFETSAATG 183 Query: 169 KGLKTVFDEAIIAILTPKKHTVKK 192 + ++ + + I+ + V+K Sbjct: 184 QNVEKAVETLLDLIMKRMEQCVEK 207 >4RKF-A nrPDB Length = 190 Score = 205 bits (523), Expect = 9e-54, Method: Composition-based stats. Identities = 54/183 (29%), Positives = 92/183 (50%), Gaps = 16/183 (8%) Query: 2 AHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVF-DHYAVSVTVGGKQYLLG 60 A M K +++G+ +VGKT L YA+D+F +V TV D +V K+ L Sbjct: 16 ADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQ 75 Query: 61 LYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLI 119 ++DTAG E Y + Y F++ + V N SF +V ++WV ++K Y+ N +L+ Sbjct: 76 IWDTAGLERYRTITTAYYRGAMGFILMYDVTNEDSFNSV-QDWVTQIKTYSWDNAQVILV 134 Query: 120 GTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAI 179 G + D+ D ++ + E+G++LA ++G + E SA +K VF+ + Sbjct: 135 GNKCDMED------------QRVISFERGRQLADQLG-VEFFETSAKENVNVKAVFERLV 181 Query: 180 IAI 182 I Sbjct: 182 DII 184 >3BC1-A nrPDB Length = 195 Score = 204 bits (520), Expect = 2e-53, Method: Composition-based stats. Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 27/205 (13%) Query: 1 MAHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVF-DHYAVSVTVG------ 53 M+ G ++K + +GD VGKT +L Y + F +++ TV D V Sbjct: 3 MSDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDG 62 Query: 54 ----GKQYLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKE 109 G++ L L+DTAG E + L + FL+ F + N SF NV+ W+ +L+ Sbjct: 63 AVGRGQRIHLQLWDTAGLERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVR-NWISQLQM 121 Query: 110 YA--PNVPFLLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALT 167 +A N +L G + DL D ++ V E+ ++LA++ G Y E SA Sbjct: 122 HAYSENPDIVLCGNKSDLED------------QRAVKEEEARELAEKYG-IPYFETSAAN 168 Query: 168 QKGLKTVFDEAIIAILTPKKHTVKK 192 + + + I+ + +V K Sbjct: 169 GTNISHAIEMLLDLIMKRMERSVDK 193 >2IEZ-A nrPDB Length = 220 Score = 204 bits (520), Expect = 2e-53, Method: Composition-based stats. Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 27/205 (13%) Query: 1 MAHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVF-DHYAVSVTVGGK---- 55 M G ++K + +GD VGKT L Y ++ F +++ TV D V + Sbjct: 3 MTDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADG 62 Query: 56 ------QYLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELK- 108 + L L+DTAG E + L + FL+ F + + SF NV+ W+ +L+ Sbjct: 63 ASGKAFKVHLQLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVR-NWMSQLQA 121 Query: 109 -EYAPNVPFLLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALT 167 Y N +LIG + DL D ++ V Q ++LA++ G Y E SA T Sbjct: 122 NAYCENPDIVLIGNKADLPD------------QREVNERQARELAEKYG-IPYFETSAAT 168 Query: 168 QKGLKTVFDEAIIAILTPKKHTVKK 192 + ++ + + I+ + V+K Sbjct: 169 GQNVEKSVETLLDLIMKRMEKCVEK 193 >5LEF-A nrPDB Length = 191 Score = 203 bits (518), Expect = 3e-53, Method: Composition-based stats. Identities = 53/204 (25%), Positives = 96/204 (47%), Gaps = 18/204 (8%) Query: 2 AHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVF-DHYAVSVTVGGKQYLLG 60 A G K V +G+ +VGKT L+ + D+F Y T+ D + ++ + + L Sbjct: 2 AMGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQ 61 Query: 61 LYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELK-EYAPNVPFLLI 119 L+DTAG E + L P + V ++ + + N SFQ +W+ +++ E +V +L+ Sbjct: 62 LWDTAGLERFRSLIPSYIRDSTVAVVVYDITNVNSFQQT-TKWIDDVRTERGSDVIIMLV 120 Query: 120 GTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAI 179 G + DL D ++ V +E+G++ AKE+ ++E SA +K +F Sbjct: 121 GNKTDLAD------------KRQVSIEEGERKAKELN-VMFIETSAKAGYNVKQLFRRVA 167 Query: 180 IAILTPKKHTVKKRIGSRCINCCL 203 A+ P + + R I+ L Sbjct: 168 AAL--PGMESTQDRSREDMIDIKL 189 >5XR6-A nrPDB Length = 194 Score = 203 bits (518), Expect = 3e-53, Method: Composition-based stats. Identities = 54/191 (28%), Positives = 85/191 (44%), Gaps = 20/191 (10%) Query: 6 GALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYA-VSVTVGGKQYLLGLYDT 64 + K V++GD VGK+ LL + + F E T+ +A + V GK ++DT Sbjct: 22 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDT 81 Query: 65 AGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEY-APNVPFLLIGTQI 123 AGQE Y + Y L+ + V A+F+N W+ EL+ + PN+ +LIG + Sbjct: 82 AGQERYRAITSAYYRGAVGALLIYDVTRHATFENAA-RWLRELRGHTDPNIVVMLIGNKC 140 Query: 124 DLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAIL 183 DLR V E+ + A+ + ++E SAL ++ F E +L Sbjct: 141 DLR------------HLVAVKTEEAKAFAER-ESLYFMETSALDATNVENAFTE----VL 183 Query: 184 TPKKHTVKKRI 194 T V KR Sbjct: 184 TQIHKIVSKRS 194 >5UB8-A nrPDB Length = 222 Score = 203 bits (518), Expect = 3e-53, Method: Composition-based stats. Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 16/180 (8%) Query: 5 PGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYA-VSVTVGGKQYLLGLYD 63 + K V++GD VGK+ LL + D F E T+ +A ++ + GK+ ++D Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWD 70 Query: 64 TAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAP-NVPFLLIGTQ 122 TAGQE Y + Y LI + + S+++V W+ ELKE+A N+ L+G + Sbjct: 71 TAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVS-RWLKELKEHADANIIIELVGNK 129 Query: 123 IDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI 182 DL + V E+ + A E + E SAL+ + F + + I Sbjct: 130 SDLD------------HLRAVPTEEAKNFAME-NNLLFTEASALSSDNVDLSFHQLLKNI 176 >2IEY-A nrPDB Length = 195 Score = 203 bits (517), Expect = 4e-53, Method: Composition-based stats. Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 27/205 (13%) Query: 1 MAHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVF-DHYAVSVTVGGK---- 55 M G ++K + +GD VGKT L Y ++ F +++ TV D V + Sbjct: 3 MTDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADG 62 Query: 56 ------QYLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELK- 108 + L L+DTAG E + L + FL+ F + + SF NV+ W+ +L+ Sbjct: 63 ASGKAFKVHLQLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVR-NWMSQLQA 121 Query: 109 -EYAPNVPFLLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALT 167 Y N +LIG + DL D ++ V Q ++LA++ G Y E SA T Sbjct: 122 NAYCENPDIVLIGNKADLPD------------QREVNERQARELAEKYG-IPYFETSAAT 168 Query: 168 QKGLKTVFDEAIIAILTPKKHTVKK 192 + ++ + + I+ + V+K Sbjct: 169 GQNVEKSVETLLDLIMKRMEKCVEK 193 >4G01-B nrPDB Length = 181 Score = 202 bits (514), Expect = 1e-52, Method: Composition-based stats. Identities = 56/183 (30%), Positives = 85/183 (46%), Gaps = 16/183 (8%) Query: 2 AHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFD-HYAVSVTVGGKQYLLG 60 A G ++ K V++GD GK+ L++ + D F E T+ ++ ++ V Sbjct: 5 AAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFE 64 Query: 61 LYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLI 119 ++DTAGQE Y L P+ Y +I F V N ASF+ K +WV EL+ PN+ L Sbjct: 65 IWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAK-KWVQELQAQGNPNMVMALA 123 Query: 120 GTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAI 179 G + DL D + V E Q A+E G ++E SA T +K +F E Sbjct: 124 GNKSDLLD------------ARKVTAEDAQTYAQENG-LFFMETSAKTATNVKEIFYEIA 170 Query: 180 IAI 182 + Sbjct: 171 RRL 173 >3RWM-B nrPDB Length = 185 Score = 200 bits (510), Expect = 3e-52, Method: Composition-based stats. Identities = 54/190 (28%), Positives = 82/190 (43%), Gaps = 17/190 (8%) Query: 5 PGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYA-VSVTVGGKQYLLGLYD 63 + K V++GD VGK+ LL + D F E T+ +A ++ V K+ ++D Sbjct: 6 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWD 65 Query: 64 TAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIGTQ 122 TAG E Y + Y LI + + +S++N W+ EL+E A NV LIG + Sbjct: 66 TAGLERYRAITSAYYRGAVGALIVYDISKSSSYENC-NHWLTELRENADDNVAVGLIGNK 124 Query: 123 IDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI 182 DL + V ++ + A E + E SAL + F E I+AI Sbjct: 125 SDL------------AHLRAVPTDEAKNFAME-NQMLFTETSALNSDNVDKAFRELIVAI 171 Query: 183 LTP-KKHTVK 191 KH V Sbjct: 172 FQMVSKHQVD 181 >1X3S-A nrPDB Length = 195 Score = 200 bits (510), Expect = 3e-52, Method: Composition-based stats. Identities = 47/179 (26%), Positives = 89/179 (49%), Gaps = 18/179 (10%) Query: 9 MLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVF-DHYAVSVTVGGKQYLLGLYDTAGQ 67 LK +++G+ VGK+ LL+ + +D F E T+ D +++V G + L ++DTAGQ Sbjct: 15 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQ 74 Query: 68 EDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA--PNVPFLLIGTQIDL 125 E + L P Y ++ + V +F + + W+ EL+ Y ++ +L+G +ID Sbjct: 75 ERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKID- 132 Query: 126 RDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILT 184 + + V +G K A++ + ++E SA T G++ F+E + I+ Sbjct: 133 ------------KENREVDRNEGLKFARKH-SMLFIEASAKTCDGVQCAFEELVEKIIQ 178 >2FG5-A nrPDB Length = 192 Score = 200 bits (508), Expect = 5e-52, Method: Composition-based stats. Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 16/182 (8%) Query: 3 HGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHY-AVSVTVGGKQYLLGL 61 G LK ++GD VGK+ ++ + D F PT+ + +V G + + + Sbjct: 17 RGSAIRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLI 76 Query: 62 YDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAP-NVPFLLIG 120 +DTAGQE + L P+ Y + +I + + SF +K +WV ELKE+ P N+ + G Sbjct: 77 WDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLK-KWVKELKEHGPENIVMAIAG 135 Query: 121 TQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAII 180 + DL D + V ++ ++ A+ IGA VE SA ++ +F Sbjct: 136 NKCDLSD------------IREVPLKDAKEYAESIGAIV-VETSAKNAINIEELFQGISR 182 Query: 181 AI 182 I Sbjct: 183 QI 184 >4DXA-A nrPDB Length = 169 Score = 199 bits (507), Expect = 5e-52, Method: Composition-based stats. Identities = 52/178 (29%), Positives = 89/178 (50%), Gaps = 15/178 (8%) Query: 7 ALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAG 66 K VV+G VGK+ L + + F E+Y PT+ D Y V V +Q +L + DTAG Sbjct: 3 MREYKLVVLGSVGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTAG 62 Query: 67 QEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVK--EEWVPELKEYAPNVPFLLIGTQID 124 E + +R L F + +S+ ++F +++ E + +K+ +VP +L+G + D Sbjct: 63 TEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKD-TDDVPMILVGNKCD 121 Query: 125 LRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI 182 L D E+ V EQGQ LA++ C ++E SA ++ + +F + + I Sbjct: 122 LED------------ERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQI 167 >2O52-A nrPDB Length = 200 Score = 199 bits (507), Expect = 5e-52, Method: Composition-based stats. Identities = 44/179 (24%), Positives = 83/179 (46%), Gaps = 16/179 (8%) Query: 7 ALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHY-AVSVTVGGKQYLLGLYDTA 65 + K +V+G GK+CLL + + F ++ T+ + + V VGGK L ++DTA Sbjct: 23 DFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTA 82 Query: 66 GQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIGTQID 124 GQE + + Y L+ + + + ++ ++ W+ + + A PN+ +L G + D Sbjct: 83 GQERFRSVTRSYYRGAAGALLVYDITSRETYNSLA-AWLTDARTLASPNIVVILCGNKKD 141 Query: 125 LRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAIL 183 L E+ V + + A+E ++E SALT + ++ F + IL Sbjct: 142 LD------------PEREVTFLEASRFAQE-NELMFLETSALTGENVEEAFLKCARTIL 187 >2BMD-A nrPDB Length = 186 Score = 199 bits (506), Expect = 8e-52, Method: Composition-based stats. Identities = 43/184 (23%), Positives = 82/184 (44%), Gaps = 16/184 (8%) Query: 6 GALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHY-AVSVTVGGKQYLLGLYDT 64 + K +V+G+ GK+CLL + F ++ T+ + + + VGGK L ++DT Sbjct: 7 YDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDT 66 Query: 65 AGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAP-NVPFLLIGTQI 123 AGQE + + Y L+ + + + ++ N W+ + + A N+ +L G + Sbjct: 67 AGQERFRSVTRSYYRGAAGALLVYDITSRETY-NALTNWLTDARMLASQNIVIILCGNKK 125 Query: 124 DLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAIL 183 DL D + V + + A+E ++E SALT + ++ F + IL Sbjct: 126 DLDAD------------REVTFLEASRFAQE-NELMFLETSALTGENVEEAFVQCARKIL 172 Query: 184 TPKK 187 + Sbjct: 173 NKIE 176 >2HUP-A nrPDB Length = 201 Score = 199 bits (506), Expect = 9e-52, Method: Composition-based stats. Identities = 47/182 (25%), Positives = 86/182 (47%), Gaps = 15/182 (8%) Query: 6 GALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVF-DHYAVSVTVGGKQYLLGLYDT 64 + K V+VGD +VGKTC++ + AF E T+ D ++ + GK+ L ++DT Sbjct: 26 YDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDT 85 Query: 65 AGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIGTQI 123 AGQE + + Y + ++ + + +SF +V W+ ++++YA N+ LLIG + Sbjct: 86 AGQERFRTITQSYYRSANGAILAYDITKRSSFLSV-PHWIEDVRKYAGSNIVQLLIGNKS 144 Query: 124 DLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAIL 183 DL + + V + + Q LA+ C +E SA ++ F ++ Sbjct: 145 DLSEL------------REVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATELI 192 Query: 184 TP 185 Sbjct: 193 MR 194 >4KLZ-A nrPDB Length = 173 Score = 198 bits (504), Expect = 1e-51, Method: Composition-based stats. Identities = 49/184 (26%), Positives = 90/184 (48%), Gaps = 14/184 (7%) Query: 7 ALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAG 66 + K V++G G VGK+ + M + + FPE++ PT+ D Y + + + + L + DTAG Sbjct: 3 SREYKLVMLGAGGVGKSAMTMQFISHRFPEDHDPTIEDAYKIRIRIDDEPANLDILDTAG 62 Query: 67 QEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKE-EWVPELKEYAPNVPFLLIGTQIDL 125 Q ++ +R + F+IC+S+ + SF V+E + + + P +L+G + DL Sbjct: 63 QAEFTAMRDQYMRAGEGFIICYSITDRRSFHEVREFKQLIYRVRRTDDTPVVLVGNKSDL 122 Query: 126 RDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILTP 185 + + + V E+G LA+E +C + E SA + + VF + I Sbjct: 123 K------------QLRQVTKEEGLALAREF-SCPFFETSAAYRYYIDDVFHALVREIRRK 169 Query: 186 KKHT 189 +K Sbjct: 170 EKEA 173 >2EW1-A nrPDB Length = 201 Score = 197 bits (501), Expect = 3e-51, Method: Composition-based stats. Identities = 44/191 (23%), Positives = 88/191 (46%), Gaps = 16/191 (8%) Query: 2 AHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVF-DHYAVSVTVGGKQYLLG 60 + + K V++G+ VGKTCL+ + FP T+ D +V + G++ L Sbjct: 19 SMEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQ 78 Query: 61 LYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPN-VPFLLI 119 ++DTAGQE + + Y + ++ + + SF EW+ E+++YA N V +L+ Sbjct: 79 IWDTAGQERFRSITQSYYRSANALILTYDITCEESF-RCLPEWLREIEQYASNKVITVLV 137 Query: 120 GTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAI 179 G +IDL + + V ++ ++ + E Y+E SA ++ +F + Sbjct: 138 GNKIDL------------AERREVSQQRAEEFS-EAQDMYYLETSAKESDNVEKLFLDLA 184 Query: 180 IAILTPKKHTV 190 +++ + Sbjct: 185 CRLISEARQNT 195 >2IL1-A nrPDB Length = 192 Score = 197 bits (501), Expect = 3e-51, Method: Composition-based stats. Identities = 45/184 (24%), Positives = 86/184 (46%), Gaps = 15/184 (8%) Query: 5 PGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVF-DHYAVSVTVGGKQYLLGLYD 63 P L+ +++G VGKT L+ + +D F E TV D +V + GK+ L ++D Sbjct: 22 PADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWD 81 Query: 64 TAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIGTQ 122 TAGQE ++ + Y ++ + + +F ++ +W+ + +YA + LL+G + Sbjct: 82 TAGQERFNSITSAYYRSAKGIILVYDITKKETFDDL-PKWMKMIDKYASEDAELLLVGNK 140 Query: 123 IDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI 182 +D D + + +QG+K A++I + E SA + +F + + I Sbjct: 141 LDCETD------------REITRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDI 188 Query: 183 LTPK 186 L Sbjct: 189 LKKM 192 >2G6B-A nrPDB Length = 180 Score = 196 bits (500), Expect = 4e-51, Method: Composition-based stats. Identities = 57/188 (30%), Positives = 88/188 (46%), Gaps = 17/188 (9%) Query: 6 GALMLKCVVVGDGAVGKTCLLMSYANDAF-PEEYVPTVF-DHYAVSVTVGGKQYLLGLYD 63 + K ++VGD VGKTCLL+ + + AF ++ TV D + V G + L ++D Sbjct: 7 YDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWD 66 Query: 64 TAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIGTQ 122 TAGQE + + Y L+ + V N ASF N+ + W+ E+ EYA +V +L+G + Sbjct: 67 TAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNI-QAWLTEIHEYAQHDVALMLLGNK 125 Query: 123 IDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI 182 +D E+ V E G+KLAKE G ++E SA T + F + Sbjct: 126 VD------------SAHERVVKREDGEKLAKEYG-LPFMETSAKTGLNVDLAFTAIAKEL 172 Query: 183 LTPKKHTV 190 Sbjct: 173 KRRSMKAP 180 >1TU4-A nrPDB Length = 171 Score = 196 bits (499), Expect = 5e-51, Method: Composition-based stats. Identities = 46/182 (25%), Positives = 79/182 (43%), Gaps = 16/182 (8%) Query: 3 HGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAV-SVTVGGKQYLLGL 61 G K V++G+ AVGK+ L++ + F E T+ + +V + + Sbjct: 1 MGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 60 Query: 62 YDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIG 120 +DTAGQE Y L P+ Y ++ + + N SF K WV EL+ A PN+ L G Sbjct: 61 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAK-NWVKELQRQASPNIVIALSG 119 Query: 121 TQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAII 180 + DL + ++ V ++ Q A + + ++E SA T + +F Sbjct: 120 NKADLAN------------KRAVDFQEAQSYADD-NSLLFMETSAKTSMNVNEIFMAIAK 166 Query: 181 AI 182 + Sbjct: 167 KL 168 >3TSO-A nrPDB Length = 178 Score = 196 bits (498), Expect = 6e-51, Method: Composition-based stats. Identities = 42/183 (22%), Positives = 79/183 (43%), Gaps = 16/183 (8%) Query: 5 PGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYA-VSVTVGGKQYLLGLYD 63 + K V++G+ VGKT LL + + F + T+ ++ +V +G ++D Sbjct: 6 DYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWD 65 Query: 64 TAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAP-NVPFLLIGTQ 122 TAG E Y + Y L+ F + ++ V E W+ EL ++A + +L+G + Sbjct: 66 TAGLERYRAITSAYYRGAVGALLVFDLTKHQTY-AVVERWLKELYDHAEATIVVMLVGNK 124 Query: 123 IDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI 182 DL + + V E+ + A+ G ++E SAL ++ F+ + I Sbjct: 125 SDLS------------QAREVPTEEARMFAENNG-LLFLETSALDSTNVELAFETVLKEI 171 Query: 183 LTP 185 Sbjct: 172 FAK 174 >3REG-A nrPDB Length = 194 Score = 195 bits (495), Expect = 1e-50, Method: Composition-based stats. Identities = 75/182 (41%), Positives = 114/182 (62%), Gaps = 10/182 (5%) Query: 5 PGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDT 64 G LK VVVGDGAVGKTCLL++++ P YVPTVF++++ + ++++L L+DT Sbjct: 19 NGKKALKIVVVGDGAVGKTCLLLAFSKGEIPTAYVPTVFENFSHVMKYKNEEFILHLWDT 78 Query: 65 AGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQID 124 AGQE+YDRLRPLSY +DV L+CF+V N SF N+ +W PE+K Y +L+G ++D Sbjct: 79 AGQEEYDRLRPLSYADSDVVLLCFAVNNRTSFDNISTKWEPEIKHYIDTAKTVLVGLKVD 138 Query: 125 LRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILT 184 LR D V ++G L +++G Y+E S++ + GL VF++++ I + Sbjct: 139 LRKD----------GSDDVTKQEGDDLCQKLGCVAYIEASSVAKIGLNEVFEKSVDCIFS 188 Query: 185 PK 186 K Sbjct: 189 NK 190 >3BFK-A nrPDB Length = 181 Score = 195 bits (495), Expect = 2e-50, Method: Composition-based stats. Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 19/191 (9%) Query: 6 GALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYA-VSVTV-GGKQYLLGLYD 63 + K V++GD VGK+ LL + D F E T+ +A S+ + K ++D Sbjct: 4 YDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWD 63 Query: 64 TAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAP-NVPFLLIGTQ 122 TAGQE Y + Y L+ + + SF+N+ E+W+ EL++ A N+ LL+G + Sbjct: 64 TAGQERYRAITSAYYRGAVGALLVYDITKKNSFENI-EKWLKELRDNADSNIVILLVGNK 122 Query: 123 IDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI 182 DL+ + + + AK+ ++E SAL ++ F + + I Sbjct: 123 SDLK------------HLRVINDNDATQYAKKEK-LAFIETSALEATNVELAFHQLLNEI 169 Query: 183 --LTPKKHTVK 191 + KK K Sbjct: 170 YNVRQKKQATK 180 >1EK0-A nrPDB Length = 170 Score = 194 bits (494), Expect = 2e-50, Method: Composition-based stats. Identities = 54/175 (30%), Positives = 88/175 (50%), Gaps = 13/175 (7%) Query: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVS-VTVGGKQYLLGLYDTAGQE 68 +K V++G+ AVGK+ +++ + ++ F E PT+ + VT+ ++DTAGQE Sbjct: 4 IKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQE 63 Query: 69 DYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAP-NVPFLLIGTQIDLRD 127 + L P+ Y L+ + V P SF + WV EL E A ++ L+G +ID+ Sbjct: 64 RFASLAPMYYRNAQAALVVYDVTKPQSFIKAR-HWVKELHEQASKDIIIALVGNKIDM-- 120 Query: 128 DPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI 182 L + E+ V E+G+KLA+E G + E SA T + + VF I Sbjct: 121 -------LQEGGERKVAREEGEKLAEEKG-LLFFETSAKTGENVNDVFLGIGEKI 167 >4PHF-A nrPDB Length = 184 Score = 194 bits (493), Expect = 3e-50, Method: Composition-based stats. Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 19/184 (10%) Query: 9 MLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVF-DHYAVSVTVGGKQY-LLGLYDTAG 66 +LK +++GD VGKT L+ Y ND + +Y T+ D VTV G + + ++DTAG Sbjct: 10 ILKVIILGDSGVGKTSLMHRYVNDKYSCQYKATIGADFLTKEVTVDGDKVATMQVWDTAG 69 Query: 67 QEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-----PNVPFLLIGT 121 QE + L Y D ++ + V N +SF+N+K W E +A PF+++G Sbjct: 70 QERFQSLGVAFYRGADCCVLVYDVTNASSFENIK-SWRDEFLVHANVNSPETFPFVILGN 128 Query: 122 QIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIA 181 +ID + K V + Q+LAK +G SA + T F+E + Sbjct: 129 KIDAEESKKI-----------VSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARS 177 Query: 182 ILTP 185 L Sbjct: 178 ALQQ 181 >2HEI-A nrPDB Length = 179 Score = 194 bits (493), Expect = 3e-50, Method: Composition-based stats. Identities = 45/183 (24%), Positives = 80/183 (43%), Gaps = 18/183 (9%) Query: 4 GPGALM--LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVS-VTVGGKQYLLG 60 G + + K V++G+ AVGK+ L++ + F E T+ + V + Sbjct: 1 GSASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFE 60 Query: 61 LYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLI 119 ++DTAGQE Y L P+ Y ++ + + N +F K WV EL+ A P++ L Sbjct: 61 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKT-WVKELQRQASPSIVIALA 119 Query: 120 GTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAI 179 G + DL + ++ V E+ Q A + + ++E SA T + +F Sbjct: 120 GNKADLAN------------KRMVEYEEAQAYADD-NSLLFMETSAKTAMNVNDLFLAIA 166 Query: 180 IAI 182 + Sbjct: 167 KKL 169 >4KYI-B nrPDB Length = 170 Score = 193 bits (491), Expect = 5e-50, Method: Composition-based stats. Identities = 45/183 (24%), Positives = 78/183 (42%), Gaps = 16/183 (8%) Query: 2 AHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAV-SVTVGGKQYLLG 60 A G K V++G+ AVGK+ L++ + F E T+ + +V + Sbjct: 2 AMGSKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFE 61 Query: 61 LYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLI 119 ++DTAG E Y L P+ Y ++ + + N +F K WV EL+ A PN+ L Sbjct: 62 IWDTAGLERYHSLAPMYYRGAQAAIVVYDITNTDTFARAK-NWVKELQRQASPNIVIALA 120 Query: 120 GTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAI 179 G + DL ++ V ++ Q A + + ++E SA T + +F Sbjct: 121 GNKADL------------ASKRAVEFQEAQAYADD-NSLLFMETSAKTAMNVNEIFMAIA 167 Query: 180 IAI 182 + Sbjct: 168 KKL 170 >5LDD-C nrPDB Length = 207 Score = 193 bits (490), Expect = 6e-50, Method: Composition-based stats. Identities = 50/186 (26%), Positives = 80/186 (43%), Gaps = 18/186 (9%) Query: 8 LMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVF-DHYAVSVTVGGKQYLLGLYDTAG 66 ++LK +++GD VGKT L+ Y N F Y T+ D V V +Q + L+DTAG Sbjct: 9 VLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVMVDDRQVTMQLWDTAG 68 Query: 67 QEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-----PNVPFLLIGT 121 QE + L Y D ++ F V N SF + + W E A N PF+++G Sbjct: 69 QERFQSLGVAFYRGADCCVLVFDVNNAKSFDAL-DSWRDEFLIQASPRDPENFPFVVLGI 127 Query: 122 QIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIA 181 +ID+ + + + ++ Q + G Y E SA ++ F Sbjct: 128 KIDVEESK-----------RVISTKRAQTFCQSKGGIPYFETSAKEAINVEEAFQVIARN 176 Query: 182 ILTPKK 187 L ++ Sbjct: 177 ALMQEE 182 >5HZH-A nrPDB Length = 332 Score = 192 bits (488), Expect = 1e-49, Method: Composition-based stats. Identities = 87/143 (60%), Positives = 109/143 (76%) Query: 43 FDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEE 102 D A + GGK LGL+DTAG EDYDRLRPLSYP TDVFLICFS+V+PASF+NV+ + Sbjct: 189 IDEAAKELGSGGKPVNLGLWDTAGLEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAK 248 Query: 103 WVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVE 162 W PE++ + PN P +L+GT++DLRDD T+ +L + K P+ QG +AKEIGA Y+E Sbjct: 249 WYPEVRHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLE 308 Query: 163 CSALTQKGLKTVFDEAIIAILTP 185 CSALTQ+GLKTVFDEAI A+L P Sbjct: 309 CSALTQRGLKTVFDEAIRAVLCP 331 Score = 78.0 bits (191), Expect = 2e-15, Method: Composition-based stats. Identities = 33/51 (64%), Positives = 40/51 (78%) Query: 4 GPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGG 54 G +KCVVVGDGAVGKTCLL+SY +AFP EY+PTVFD+Y+ +V V G Sbjct: 1 GGSMQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDG 51 >1ZC4-A nrPDB Length = 175 Score = 191 bits (486), Expect = 1e-49, Method: Composition-based stats. Identities = 59/182 (32%), Positives = 89/182 (48%), Gaps = 16/182 (8%) Query: 9 MLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQE 68 + K ++VG G VGK+ L + + D F E+Y PT D Y V + G++ + + DTAG E Sbjct: 6 LHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGLE 65 Query: 69 DYDRLRPLSYPMTDVFLICFSVVNPASFQNVK--EEWVPELKEYAPNVPFLLIGTQIDLR 126 DY +R + + FL FS+ SF E + +KE NVPFLL+G + DL Sbjct: 66 DYAAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRVKE-DENVPFLLVGNKSDLE 124 Query: 127 DDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILTPK 186 D ++ V VE+ + A++ YVE SA T+ + VF + + I K Sbjct: 125 D------------KRQVSVEEAKNRAEQWN-VNYVETSAKTRANVDKVFFDLMREIRARK 171 Query: 187 KH 188 Sbjct: 172 ME 173 >2KE5-A nrPDB Length = 174 Score = 191 bits (485), Expect = 2e-49, Method: Composition-based stats. Identities = 57/181 (31%), Positives = 89/181 (49%), Gaps = 15/181 (8%) Query: 9 MLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQE 68 + K ++VG G VGK+ L + + D F E+Y PT D Y V + G++ + + DTAG E Sbjct: 3 LHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGLE 62 Query: 69 DYDRLRPLSYPMTDVFLICFSVVNPASFQNVKE--EWVPELKEYAPNVPFLLIGTQIDLR 126 DY +R + + FL+ FS+ SF E E + +K +P L++G + DL Sbjct: 63 DYAAIRDNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKAEEDKIPLLVVGNKSDLE 122 Query: 127 DDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILTPK 186 + + V VE+ + A+E G YVE SA T+ + VF + + I T K Sbjct: 123 E------------RRQVPVEEARSKAEEWG-VQYVETSAKTRANVDKVFFDLMREIRTKK 169 Query: 187 K 187 Sbjct: 170 M 170 >1YZU-A nrPDB Length = 170 Score = 190 bits (483), Expect = 4e-49, Method: Composition-based stats. Identities = 53/182 (29%), Positives = 98/182 (53%), Gaps = 16/182 (8%) Query: 4 GPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHY-AVSVTVGGKQYLLGLY 62 G A K V++G+G VGKT L++ Y + F ++++ T+ + + +GGK+ L ++ Sbjct: 1 GSRAYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIW 60 Query: 63 DTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPN-VPFLLIGT 121 DTAGQE + L P+ Y ++ ++ + + + SFQ VK WV EL++ N + ++G Sbjct: 61 DTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVK-NWVKELRKMLGNEICLCIVGN 119 Query: 122 QIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIA 181 +IDL KE+ V +++ + A+ +GA Y SA KG++ +F + Sbjct: 120 KIDLE------------KERHVSIQEAESYAESVGAKHY-HTSAKQNKGIEELFLDLCKR 166 Query: 182 IL 183 ++ Sbjct: 167 MI 168 >1Z06-A nrPDB Length = 189 Score = 190 bits (482), Expect = 4e-49, Method: Composition-based stats. Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 21/184 (11%) Query: 3 HGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVF-DHYAVSVTVGGKQYLLGL 61 G + + K +V+GD VGKTCL + FP+ T+ D +V + G++ + L Sbjct: 14 RGSRSRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQL 73 Query: 62 YDTAGQEDYD-RLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEY--APNVPFLL 118 +DTAGQE + + Y + + + N ASF ++ W+ E K++ A ++P +L Sbjct: 74 WDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSL-PAWIEECKQHLLANDIPRIL 132 Query: 119 IGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALT---QKGLKTVF 175 +G + DLR V + QK A + E SA ++ +F Sbjct: 133 VGNKCDLRSAI------------QVPTDLAQKFADTH-SMPLFETSAKNPNDNDHVEAIF 179 Query: 176 DEAI 179 Sbjct: 180 MTLA 183 >5YOZ-A nrPDB Length = 177 Score = 190 bits (482), Expect = 5e-49, Method: Composition-based stats. Identities = 41/171 (23%), Positives = 77/171 (45%), Gaps = 15/171 (8%) Query: 11 KCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHY-AVSVTVGGKQYLLGLYDTAGQED 69 K V++G+ GK+ + + + + F T+ + + +V + G+ ++DTAG E Sbjct: 17 KIVMLGESGAGKSSIALRFTRNEFLANQETTIGAAFLSKTVMIDGRALKYEIWDTAGLER 76 Query: 70 YDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIGTQIDLRDD 128 + L P+ Y L+ + + N S + + W+ EL+ A P++ +L+G + DL Sbjct: 77 FRSLAPIYYRGASGALVVYDITNSESLKKA-QTWIKELRANADPSLIIVLVGNKKDL--- 132 Query: 129 PKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAI 179 + V E GQ+LA E + E SA ++ VF + Sbjct: 133 ---------GSLRQVSFEDGQRLAAEEQLAAFYEASAKDNNNVEQVFLDLA 174 >2REX-B nrPDB Length = 197 Score = 190 bits (482), Expect = 5e-49, Method: Composition-based stats. Identities = 69/183 (37%), Positives = 104/183 (56%), Gaps = 1/183 (0%) Query: 11 KCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDY 70 K V+VGD GKT +L A D +PE YVPTVF++Y + ++ L L+DT+G Y Sbjct: 12 KLVLVGDVQCGKTAMLQVLAKDCYPETYVPTVFENYTACLETEEQRVELSLWDTSGSPYY 71 Query: 71 DRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDPK 130 D +RPL Y +D L+CF + P + + ++W E+ +Y P+ LLIG + DLR D Sbjct: 72 DNVRPLCYSDSDAVLLCFDISRPETVDSALKKWRTEILDYCPSTRVLLIGCKTDLRTDLS 131 Query: 131 TLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQK-GLKTVFDEAIIAILTPKKHT 189 TL L+ K+ P+ EQG +AK++GA Y+E SA T + + ++F A + L Sbjct: 132 TLMELSHQKQAPISYEQGCAIAKQLGAEIYLEGSAFTSEKSIHSIFRTASMLCLNKPSPL 191 Query: 190 VKK 192 +K Sbjct: 192 PQK 194 >2FFQ-A nrPDB Length = 171 Score = 190 bits (482), Expect = 5e-49, Method: Composition-based stats. Identities = 49/177 (27%), Positives = 91/177 (51%), Gaps = 16/177 (9%) Query: 9 MLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVF-DHYAVSVTVGGKQYLLGLYDTAGQ 67 K V +G+ +VGKT L+ + D+F Y T+ D + ++ + + L L+DTAGQ Sbjct: 2 KFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 61 Query: 68 EDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELK-EYAPNVPFLLIGTQIDLR 126 E + L P + V ++ + + N SFQ +W+ +++ E +V +L+G + DL Sbjct: 62 ERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTS-KWIDDVRTERGSDVIIMLVGNKTDLA 120 Query: 127 DDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAIL 183 D ++ + +E+G++ AKE+ + ++E SA T +K +F A+L Sbjct: 121 D------------KRQITIEEGEQRAKEL-SVMFIETSAKTGYNVKQLFRRVASALL 164 >6IYB-A nrPDB Length = 199 Score = 188 bits (479), Expect = 1e-48, Method: Composition-based stats. Identities = 48/196 (24%), Positives = 78/196 (39%), Gaps = 24/196 (12%) Query: 2 AHGPGAL---MLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVF-DHYAVSVTVGGKQY 57 A G + +LK +++GD VGKT L+ Y N F +Y T+ D V V + Sbjct: 3 AMGSTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLV 62 Query: 58 LLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-----P 112 + ++DTAG E + Y D ++ F V P +F+ + + W E A Sbjct: 63 TMQIWDTAGLERFQS-GVAFYRGADCCVLVFDVTAPNTFKTL-DSWRDEFLIQASPRDPE 120 Query: 113 NVPFLLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLK 172 N PF+++G +IDL + + V ++ Q Y E SA ++ Sbjct: 121 NFPFVVLGNKIDLEN-------------RQVATKRAQAWCYSKNNIPYFETSAKEAINVE 167 Query: 173 TVFDEAIIAILTPKKH 188 F L + Sbjct: 168 QAFQTIARNALKQETE 183 >1YVD-A nrPDB Length = 169 Score = 188 bits (478), Expect = 1e-48, Method: Composition-based stats. Identities = 44/177 (24%), Positives = 78/177 (44%), Gaps = 16/177 (9%) Query: 8 LMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHY-AVSVTVGGKQYLLGLYDTAG 66 LK ++GD VGK+ ++ + D+F PT+ + +V + + ++DTAG Sbjct: 4 RELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAG 63 Query: 67 QEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIGTQIDL 125 QE + L P+ Y + +I + + +F +K WV EL+++ P++ + G + DL Sbjct: 64 QERFRALAPMYYRGSAAAIIVYDITKEETFSTLK-NWVRELRQHGPPSIVVAIAGNKCDL 122 Query: 126 RDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI 182 D + V + A I A +VE SA + +F E I Sbjct: 123 TDV------------REVMERDAKDYADSIHAI-FVETSAKNAININELFIEISRRI 166 >2GIL-A nrPDB Length = 162 Score = 187 bits (475), Expect = 3e-48, Method: Composition-based stats. Identities = 48/176 (27%), Positives = 88/176 (50%), Gaps = 16/176 (9%) Query: 9 MLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVF-DHYAVSVTVGGKQYLLGLYDTAGQ 67 K V +G+ +VGKT L+ + D+F Y T+ D + ++ + + L L+DTAGQ Sbjct: 1 KFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 60 Query: 68 EDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELK-EYAPNVPFLLIGTQIDLR 126 E + L P + V ++ + + N SFQ +W+ +++ E +V +L+G + DL Sbjct: 61 ERFRSLIPSYIRDSTVAVVVYDITNVNSFQQT-TKWIDDVRTERGSDVIIMLVGNKTDLA 119 Query: 127 DDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI 182 D ++ V +E+G++ AKE+ ++E SA +K +F A+ Sbjct: 120 D------------KRQVSIEEGERKAKELN-VMFIETSAKAGYNVKQLFRRVAAAL 162 >1D5C-A nrPDB Length = 162 Score = 186 bits (474), Expect = 4e-48, Method: Composition-based stats. Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 16/171 (9%) Query: 9 MLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVF-DHYAVSVTVGGKQYLLGLYDTAGQ 67 K V +G+ AVGKT ++ + D F Y T+ D + ++ + L L+DTAGQ Sbjct: 1 KYKLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWDTAGQ 60 Query: 68 EDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPEL-KEYAPNVPFLLIGTQIDLR 126 E + L P + ++ + + N SF+N +W+ ++ E +V L+G + DL Sbjct: 61 ERFRSLIPSYIRDSAAAIVVYDITNRQSFENT-TKWIQDILNERGKDVIIALVGNKTDLG 119 Query: 127 DDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDE 177 D + V E+G + A+E + E SA +K +F + Sbjct: 120 DL------------RKVTYEEGMQKAQEYNTM-FHETSAKAGHNIKVLFKK 157 >2G77-B nrPDB Length = 198 Score = 186 bits (473), Expect = 6e-48, Method: Composition-based stats. Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 21/181 (11%) Query: 6 GALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVF-DHYAVSVTVGGKQYLLGLYDT 64 + + K +V+GD VGKTCL + FP+ T+ D +V + G++ + L+DT Sbjct: 26 RSRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDT 85 Query: 65 AGQEDYD-RLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEY--APNVPFLLIGT 121 AGQE + + Y + + + N ASF ++ W+ E K++ A ++P +L+G Sbjct: 86 AGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSL-PAWIEECKQHLLANDIPRILVGN 144 Query: 122 QIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALT---QKGLKTVFDEA 178 + DLR V + QK A + E SA ++ +F Sbjct: 145 KCDLRSAI------------QVPTDLAQKFADTH-SMPLFETSAKNPNDNDHVEAIFMTL 191 Query: 179 I 179 Sbjct: 192 A 192 >4KU4-A nrPDB Length = 206 Score = 185 bits (470), Expect = 1e-47, Method: Composition-based stats. Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 32/214 (14%) Query: 1 MAHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLG 60 ++ G G + K ++G+G VGKT L ++ F E Y PT+ D Y + G L Sbjct: 6 LSPGAGKITDKIAMLGEGGVGKTSLTVNLTKHVFSETYDPTLEDSYRRQCVIDGIPSHLE 65 Query: 61 LYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELK------------ 108 + DTAGQE+Y LR ++F+I F V +SF+ + + ++ Sbjct: 66 ILDTAGQEEYGALREQWIRQNELFVIVFDVTRRSSFEAAERLFEEVIQTKRKLDETRRHP 125 Query: 109 --EYAPNVPF-----LLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYV 161 + ++PF +L+G + DL + V +G LAK++G C +V Sbjct: 126 GDRHPDDLPFAPSLVVLVGNKCDLDT------------RREVGTLEGSSLAKKLG-CGFV 172 Query: 162 ECSALTQKGLKTVFDEAIIAILTPKKHTVKKRIG 195 E SA ++ F + A K+ + Sbjct: 173 ETSAKLGTNVEEAFFSVVRADRRRKREVTDEEQR 206 >3CON-A nrPDB Length = 190 Score = 183 bits (465), Expect = 4e-47, Method: Composition-based stats. Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 17/171 (9%) Query: 22 KTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPMT 81 K+ L + + F +EY PT+ D Y V + G+ LL + DTAGQE+Y +R Sbjct: 34 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 93 Query: 82 DVFLICFSVVNPASFQ--NVKEEWVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLNDMK 139 + FL F++ N SF N+ E + +K+ + +VP +L+G + DL Sbjct: 94 EGFLCVFAINNSKSFADINLYREQIKRVKD-SDDVPMVLVGNKCDLPT------------ 140 Query: 140 EKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILTPKKHTV 190 + V +Q +LAK G ++E SA T++G++ F + I + + Sbjct: 141 -RTVDTKQAHELAKSYG-IPFIETSAKTRQGVEDAFYTLVREIRQYRMKKL 189 >2ERX-A nrPDB Length = 172 Score = 182 bits (463), Expect = 8e-47, Method: Composition-based stats. Identities = 42/172 (24%), Positives = 78/172 (45%), Gaps = 15/172 (8%) Query: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQED 69 + V G G VGK+ L++ + F E Y+PTV D Y ++ L + DT G Sbjct: 4 YRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQITDTTGSHQ 63 Query: 70 YDRLRPLSYPMTDVFLICFSVVNPASFQNVKE--EWVPELKEYAPNVPFLLIGTQIDLRD 127 + ++ LS F++ +S+ + S + +K E + E+K ++P +L+G + D Sbjct: 64 FPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVGNKCD--- 120 Query: 128 DPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAI 179 + + V + + LA+ C ++E SA +K +F E + Sbjct: 121 ---------ESPSREVQSSEAEALARTWK-CAFMETSAKLNHNVKELFQELL 162 >4WA7-A nrPDB Length = 170 Score = 182 bits (462), Expect = 1e-46, Method: Composition-based stats. Identities = 48/169 (28%), Positives = 82/169 (48%), Gaps = 17/169 (10%) Query: 22 KTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPMT 81 K+ L + + F +EY PT+ D Y V + G+ LL + DTAG E+Y +R Sbjct: 17 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGLEEYSAMRDQYMRTG 76 Query: 82 DVFLICFSVVNPASFQNVK--EEWVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLNDMK 139 + FL F++ N SF+++ E + +K+ + +VP +L+G + DL Sbjct: 77 EGFLCVFAINNTKSFEDIHHYREQIKRVKD-SEDVPMVLVGNKCDL-------------P 122 Query: 140 EKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILTPKKH 188 + V +Q Q LA+ G ++E SA T++G+ F + I K+ Sbjct: 123 SRTVDTKQAQDLARSYG-IPFIETSAKTRQGVDDAFYTLVREIRKHKEK 170 >5UHV-A nrPDB Length = 166 Score = 181 bits (461), Expect = 1e-46, Method: Composition-based stats. Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 17/165 (10%) Query: 22 KTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPMT 81 K+ L + + F +EY PT+ D Y V + G+ LL + DTAGQE+Y +R Sbjct: 16 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 75 Query: 82 DVFLICFSVVNPASFQ--NVKEEWVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLNDMK 139 + FL F++ N SF N+ E + +K+ + +VP +L+G + DL Sbjct: 76 EGFLCVFAINNSKSFADINLYREQIKRVKD-SDDVPMVLVGNKCDLPT------------ 122 Query: 140 EKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILT 184 + V +Q +LAK G ++E SA T++G++ F + I Sbjct: 123 -RTVDTKQAHELAKSYG-IPFIETSAKTRQGVEDAFYTLVREIRQ 165 >5WDQ-A nrPDB Length = 170 Score = 181 bits (459), Expect = 2e-46, Method: Composition-based stats. Identities = 48/165 (29%), Positives = 81/165 (49%), Gaps = 17/165 (10%) Query: 22 KTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPMT 81 K+ L + + F +EY PT+ D Y V + G+ LL + DTAGQE+Y +R Sbjct: 20 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 79 Query: 82 DVFLICFSVVNPASFQNVKE--EWVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLNDMK 139 + FL F++ N SF+++ + E + +K+ + +VP +L+G + D Sbjct: 80 EGFLCVFAINNTKSFEDIHQYREQIKRVKD-SDDVPMVLVGNKCD-------------AA 125 Query: 140 EKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILT 184 + V Q Q LA+ G Y+E SA T++G++ F + I Sbjct: 126 ARTVESRQAQDLARSYG-IPYIETSAKTRQGVEDAFYTLVREIRQ 169 >2P5S-A nrPDB Length = 199 Score = 179 bits (455), Expect = 6e-46, Method: Composition-based stats. Identities = 53/180 (29%), Positives = 82/180 (45%), Gaps = 10/180 (5%) Query: 5 PGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVF-DHYAVSVTVGGKQYLLGLYD 63 K V+ GD AVGK+ LM + F E T+ D ++ V G++ +L L+D Sbjct: 24 SSQKAYKIVLAGDAAVGKSSFLMRLCKNEFRENISATLGVDFQMKTLIVDGERTVLQLWD 83 Query: 64 TAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIGTQ 122 TAGQE + + + D L+ + V SF N++E WV +++ A VP +L+G + Sbjct: 84 TAGQERFRSIAKSYFRKADGVLLLYDVTCEKSFLNIRE-WVDMIEDAAHETVPIMLVGNK 142 Query: 123 IDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI 182 D+RD T +K V G+KLA GA + E SA + + Sbjct: 143 ADIRDTAAT------EGQKCVPGHFGEKLAMTYGAL-FCETSAKDGSNIVEAVLHLAREV 195 >2ERY-A nrPDB Length = 172 Score = 178 bits (453), Expect = 1e-45, Method: Composition-based stats. Identities = 43/168 (25%), Positives = 77/168 (45%), Gaps = 14/168 (8%) Query: 22 KTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPMT 81 K+ L + + F +Y PT+ D Y + + L + DTAGQE++ +R Sbjct: 18 KSALTIQFIQSYFVTDYDPTIEDSYTKQCVIDDRAARLDILDTAGQEEFGAMREQYMRTG 77 Query: 82 DVFLICFSVVNPASFQNVKEEWVPELK-EYAPNVPFLLIGTQIDLRDDPKTLARLNDMKE 140 + FL+ FSV + SF+ + + L+ + P +LIG + DL + Sbjct: 78 EGFLLVFSVTDRGSFEEIYKFQRQILRVKDRDEFPMILIGNKADLD------------HQ 125 Query: 141 KPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILTPKKH 188 + V E+GQ+LA+++ Y+E SA + + F E + I ++ Sbjct: 126 RQVTQEEGQQLARQLK-VTYMEASAKIRMNVDQAFHELVRVIRKFQEQ 172 >5WDR-A nrPDB Length = 171 Score = 177 bits (450), Expect = 3e-45, Method: Composition-based stats. Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 16/165 (9%) Query: 22 KTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPMT 81 K+ L + F EY PT+ D Y V++ + LL + DTAGQEDY +R Sbjct: 20 KSALTIQLIQQHFVTEYDPTIEDSYRKHVSIDDEACLLDILDTAGQEDYSAMRDQYMRTG 79 Query: 82 DVFLICFSVVNPASFQNVK--EEWVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLNDMK 139 + FL +S+ + S + E + +K+ VP +L+G + DL + Sbjct: 80 EGFLCVYSIDSQQSLDEIHSFREQILRVKDQ-DEVPMILVGNKCDLEE------------ 126 Query: 140 EKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILT 184 + V E GQ +AK + ++E SA + ++ F + + I Sbjct: 127 HREVSTEAGQAVAKSY-SIPFMETSAKKRINVEEAFYQLVREIRK 170 >2ATV-A nrPDB Length = 196 Score = 176 bits (446), Expect = 8e-45, Method: Composition-based stats. Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 18/184 (9%) Query: 7 ALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAG 66 + +K + G VGK+ L++ + F EY PT+ Y T+ + + + DTAG Sbjct: 26 SAEVKLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQATIDDEVVSMEILDTAG 85 Query: 67 QEDYDRLRPLSYPMTDVFLICFSVVNPASFQNV--KEEWVPELKEYAPNVPFLLIGTQID 124 QED + R + F++ + + + SF+ V + + E+K+ NV +L+G + D Sbjct: 86 QEDTIQ-REGHMRWGEGFVLVYDITDRGSFEEVLPLKNILDEIKK-PKNVTLILVGNKAD 143 Query: 125 LRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQK-GLKTVFDEAIIAIL 183 L + V E+G+KLA E+ AC + ECSA T + + +F E + Sbjct: 144 LD------------HSRQVSTEEGEKLATEL-ACAFYECSACTGEGNITEIFYELCREVR 190 Query: 184 TPKK 187 + Sbjct: 191 RRRM 194 >4FMC-F nrPDB Length = 117 Score = 174 bits (442), Expect = 2e-44, Method: Composition-based stats. Identities = 41/116 (35%), Positives = 67/116 (57%), Gaps = 3/116 (2%) Query: 12 CVVVGDGAVGKTCLLMSYANDAFPEEYVPTVF-DHYAVSVTVGGKQYLLGLYDTAGQEDY 70 +++GD VGK+CLL+ +A+D + E Y+ T+ D ++ + GK L ++DTAGQE + Sbjct: 1 LLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERF 60 Query: 71 DRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIGTQIDL 125 + Y ++ + V + SF NVK+ W+ E+ YA NV LL+G + DL Sbjct: 61 RTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYASENVNKLLVGNKCDL 115 >2FN4-A nrPDB Length = 181 Score = 174 bits (442), Expect = 2e-44, Method: Composition-based stats. Identities = 37/168 (22%), Positives = 70/168 (41%), Gaps = 14/168 (8%) Query: 22 KTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPMT 81 K+ L + + F +Y PT+ D Y +V G L + DTAGQE++ +R Sbjct: 22 KSALTIQFIQSYFVSDYDPTIEDSYTKICSVDGIPARLDILDTAGQEEFGAMREQYMRAG 81 Query: 82 DVFLICFSVVNPASFQNVKEEWVPELK-EYAPNVPFLLIGTQIDLRDDPKTLARLNDMKE 140 FL+ F++ + SF V + + L+ + + P +L+G + DL + Sbjct: 82 HGFLLVFAINDRQSFNEVGKLFTQILRVKDRDDFPVVLVGNKADLE------------SQ 129 Query: 141 KPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILTPKKH 188 + V + Y E SA + + F++ + A+ ++ Sbjct: 130 RQVPRSEASAFGASHH-VAYFEASAKLRLNVDEAFEQLVRAVRKYQEQ 176 >3PIR-A nrPDB Length = 183 Score = 173 bits (438), Expect = 6e-44, Method: Composition-based stats. Identities = 43/167 (25%), Positives = 77/167 (46%), Gaps = 17/167 (10%) Query: 22 KTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPMT 81 K+ L + + F EY PT+ D Y + + +L + DTAGQE++ +R Sbjct: 31 KSALTIQFFQKIFVPEYDPTIEDSYLKHTEIDNQWAILDVLDTAGQEEFSAMREQYMRTG 90 Query: 82 DVFLICFSVVNPASFQNVKE--EWVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLNDMK 139 D FLI +SV + ASF++V + + +K+ + P +L+ ++DL M Sbjct: 91 DGFLIVYSVTDKASFEHVDRFHQLILRVKDR-ESFPMILVANKVDL------------MH 137 Query: 140 EKPVCVEQGQKLAKEIGACCYVECSALT-QKGLKTVFDEAIIAILTP 185 + V +QG+++A + Y+E SA + F + + I Sbjct: 138 LRKVTRDQGKEMATKYN-IPYIETSAKDPPLNVDKTFHDLVRVIRQQ 183 >3T5G-A nrPDB Length = 181 Score = 172 bits (437), Expect = 7e-44, Method: Composition-based stats. Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 14/179 (7%) Query: 5 PGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDT 64 P + K ++G +VGK+ L + + F + Y PT+ + + +TV G++Y L L DT Sbjct: 2 PQSKSRKIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKLITVNGQEYHLQLVDT 61 Query: 65 AGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAP-NVPFLLIGTQI 123 AGQ++Y + +++ +SV + SF+ +K L +P +L+G + Sbjct: 62 AGQDEYSIFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKVQIPIMLVGNKK 121 Query: 124 DLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI 182 DL E+ + E+G+ LA+ A ++E SA + VF I+ Sbjct: 122 DLH------------MERVISYEEGKALAESWNA-AFLESSAKENQTAVDVFRRIILEA 167 >1Z22-A nrPDB Length = 168 Score = 170 bits (430), Expect = 5e-43, Method: Composition-based stats. Identities = 46/177 (25%), Positives = 77/177 (43%), Gaps = 15/177 (8%) Query: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVF-DHYAVSVTVGGKQYLLGLYDTAGQE 68 +K VVVG+GAVGK+ ++ Y F ++Y T+ D + V + L L+DTAGQE Sbjct: 6 IKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQE 65 Query: 69 DYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDD 128 ++D + Y ++ FS + SF+ + W ++ ++P L+ +IDL DD Sbjct: 66 EFDAITKAYYRGAQACVLVFSTTDRESFEAIS-SWREKVVAEVGDIPTALVQNKIDLLDD 124 Query: 129 PKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILTP 185 + E+ + LAK + + S + VF L Sbjct: 125 SC------------IKNEEAEGLAKRLK-LRFYRTSVKEDLNVSEVFKYLAEKHLQK 168 >3OES-A nrPDB Length = 201 Score = 167 bits (423), Expect = 3e-42, Method: Composition-based stats. Identities = 54/190 (28%), Positives = 90/190 (47%), Gaps = 14/190 (7%) Query: 5 PGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDT 64 P K V++G VGKT L + F E Y PTV + Y+ VT+G ++ L L DT Sbjct: 20 PLVRYRKVVILGYRCVGKTSLAHQFVEGEFSEGYDPTVENTYSKIVTLGKDEFHLHLVDT 79 Query: 65 AGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPN-VPFLLIGTQI 123 AGQ++Y L +++ +SV + SFQ ++ + + + VP +L+G + Sbjct: 80 AGQDEYSILPYSFIIGVHGYVLVYSVTSLHSFQVIESLYQKLHEGHGKTRVPVVLVGNKA 139 Query: 124 DLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAIL 183 DL E+ V +G+KLA+ GA ++E SA + + +F + I I Sbjct: 140 DLS------------PEREVQAVEGKKLAESWGA-TFMESSARENQLTQGIFTKVIQEIA 186 Query: 184 TPKKHTVKKR 193 + ++R Sbjct: 187 RVENSYGQER 196 >3CBQ-A nrPDB Length = 195 Score = 166 bits (422), Expect = 4e-42, Method: Composition-based stats. Identities = 49/191 (25%), Positives = 83/191 (43%), Gaps = 18/191 (9%) Query: 3 HGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVP-TVFDHYAVSVTVGGKQYLLGL 61 G + K ++VG+ VGK+ L ++ + P D Y + V ++ L + Sbjct: 17 QGQKDGIFKVMLVGESGVGKSTLAGTFGGLQGDSAHEPENPEDTYERRIMVDKEEVTLVV 76 Query: 62 YDTAGQED-YDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAP--NVPFLL 118 YD Q D LR D FLI FSV + SF V E + L+ P ++P +L Sbjct: 77 YDIWEQGDAGGWLRDHCLQTGDAFLIVFSVTDRRSFSKVPET-LLRLRAGRPHHDLPVIL 135 Query: 119 IGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEA 178 +G + DL + + V +E+G+ LA + +C ++E SA + +F+ A Sbjct: 136 VGNKSDL------------ARSREVSLEEGRHLAGTL-SCKHIETSAALHHNTRELFEGA 182 Query: 179 IIAILTPKKHT 189 + I + Sbjct: 183 VRQIRLRRGRN 193 >4CZ2-A nrPDB Length = 230 Score = 164 bits (416), Expect = 2e-41, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 78/199 (39%), Gaps = 20/199 (10%) Query: 9 MLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQ--YLLGLYDTAG 66 + K +V+G+ VGKT ++ Y + F + Y T+ +A+ V + L L+D AG Sbjct: 30 LFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAG 89 Query: 67 QEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPEL--KEYAPN---VPFLLIGT 121 E + + + Y + F + ++F+ V +W +L K + PN +P +L+ Sbjct: 90 LERFGNMTRVYYKEAMGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGSPIPAVLLAN 148 Query: 122 QIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIA 181 + D D + Q + KE G + E SA ++ + Sbjct: 149 KCDQNKDSS------------MSPSQMDQFCKEHGFAGWFETSAKDNINIEEAARFLVEK 196 Query: 182 ILTPKKHTVKKRIGSRCIN 200 +L + + I Sbjct: 197 MLVNHQSFPNEENDVDKIK 215 >3RAP-R nrPDB Length = 167 Score = 164 bits (416), Expect = 2e-41, Method: Composition-based stats. Identities = 45/162 (27%), Positives = 80/162 (49%), Gaps = 16/162 (9%) Query: 22 KTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPMT 81 K+ L + + F E+Y PT+ D Y + V +L + DTAG E + +R L Sbjct: 16 KSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNG 75 Query: 82 DVFLICFSVVNPASFQNVKE--EWVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLNDMK 139 F++ +S+VN SFQ++K + + +K Y VP +L+G ++DL + + + Sbjct: 76 QGFILVYSLVNQQSFQDIKPMRDQIIRVKRY-EKVPVILVGNKVDLESEREVSSSE---- 130 Query: 140 EKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIA 181 G+ LA+E G C ++E SA ++ + +F E + Sbjct: 131 --------GRALAEEWG-CPFMETSAKSKTMVDELFAEIVRQ 163 >2G3Y-A nrPDB Length = 211 Score = 163 bits (414), Expect = 4e-41, Method: Composition-based stats. Identities = 41/198 (20%), Positives = 90/198 (45%), Gaps = 22/198 (11%) Query: 1 MAHGPGALMLKCVVVGDGAVGKTCLLMSY--ANDAFPEEYVPTVFDHYAVSVTVGGKQ-- 56 ++ G + V++G+ VGK+ L + +D+ + D Y ++ V G+ Sbjct: 29 ISSESGNTYYRVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESAT 88 Query: 57 -YLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELK-EYAPNV 114 LL +++ G+ + L + D +LI +S+ + ASF+ E + + ++ Sbjct: 89 IILLDMWENKGENE--WLHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDI 146 Query: 115 PFLLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTV 174 P +L+G + DL ++ + V V +G+ A + C ++E SA Q +K + Sbjct: 147 PIILVGNKSDL------------VRCREVSVSEGRACAV-VFDCKFIETSAAVQHNVKEL 193 Query: 175 FDEAIIAILTPKKHTVKK 192 F+ + + ++ + +K Sbjct: 194 FEGIVRQV-RLRRDSKEK 210 >2GF0-A nrPDB Length = 199 Score = 163 bits (413), Expect = 4e-41, Method: Composition-based stats. Identities = 40/193 (20%), Positives = 80/193 (41%), Gaps = 24/193 (12%) Query: 22 KTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPMT 81 K+ L++ + F + Y+PT+ D Y ++ L + DT G + ++ LS Sbjct: 21 KSSLVLRFVKGTFRDTYIPTIEDTYRQVISCDKSVCTLQITDTTGSHQFPAMQRLSISKG 80 Query: 82 DVFLICFSVVNPASFQNVKE--EWVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLNDMK 139 F++ FSV + S + + + + ++K ++P +L+G + D Sbjct: 81 HAFILVFSVTSKQSLEELGPIYKLIVQIKGSVEDIPVMLVGNKCD-------------ET 127 Query: 140 EKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILTP--------KKHTVK 191 ++ V + Q +A+E C ++E SA +K +F E + K+ + Sbjct: 128 QREVDTREAQAVAQEWK-CAFMETSAKMNYNVKELFQELLTLETRRNMSLNIDGKRSGKQ 186 Query: 192 KRIGSRCINCCLI 204 KR C L+ Sbjct: 187 KRTDRVKGKCTLM 199 >6FF8-A nrPDB Length = 181 Score = 163 bits (412), Expect = 7e-41, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 74/182 (40%), Gaps = 20/182 (10%) Query: 9 MLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQ--YLLGLYDTAG 66 + K +V+G+ VGKT ++ Y + F + Y T+ +A+ V + L L+D AG Sbjct: 8 LFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAG 67 Query: 67 QEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPEL--KEYAPN---VPFLLIGT 121 E + + + Y + F + ++F+ V +W +L K + PN +P +L+ Sbjct: 68 LERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGSPIPAVLLAN 126 Query: 122 QIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIA 181 + D D Q + KE G + E SA ++ + Sbjct: 127 KCDQNKDSSQ------------SPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEK 174 Query: 182 IL 183 IL Sbjct: 175 IL 176 >5UWI-A nrPDB Length = 237 Score = 163 bits (412), Expect = 7e-41, Method: Composition-based stats. Identities = 42/183 (22%), Positives = 74/183 (40%), Gaps = 17/183 (9%) Query: 2 AHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDH-YAVSVTVGGKQYLLG 60 A G + K V+VGDG GKT + + F ++YV T+ + + Sbjct: 24 AQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFN 83 Query: 61 LYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIG 120 ++DTAGQE + LR Y +I F V + +++NV W +L N+P +L G Sbjct: 84 VWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNV-PNWHRDLVRVCENIPIVLCG 142 Query: 121 TQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAII 180 ++D++D + ++K Y + SA + + F Sbjct: 143 NKVDIKDRKVKAKSIVFHRKK---------------NLQYYDISAKSNYNFEKPFLWLAR 187 Query: 181 AIL 183 ++ Sbjct: 188 KLI 190 >2N1B-A nrPDB Length = 261 Score = 163 bits (412), Expect = 7e-41, Method: Composition-based stats. Identities = 42/183 (22%), Positives = 74/183 (40%), Gaps = 17/183 (9%) Query: 2 AHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDH-YAVSVTVGGKQYLLG 60 A G + K V+VGDG GKT + + F ++YV T+ + + Sbjct: 44 AQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFN 103 Query: 61 LYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIG 120 ++DTAGQE + LR Y +I F V + +++NV W +L N+P +L G Sbjct: 104 VWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNV-PNWHRDLVRVCENIPIVLCG 162 Query: 121 TQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAII 180 ++D++D + ++K Y + SA + + F Sbjct: 163 NKVDIKDRKVKAKSIVFHRKK---------------NLQYYDISAKSNYNFEKPFLWLAR 207 Query: 181 AIL 183 ++ Sbjct: 208 KLI 210 >5CLL-A nrPDB Length = 191 Score = 163 bits (412), Expect = 7e-41, Method: Composition-based stats. Identities = 42/183 (22%), Positives = 74/183 (40%), Gaps = 17/183 (9%) Query: 2 AHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDH-YAVSVTVGGKQYLLG 60 A G + K V+VGDG GKT + + F ++YV T+ + + Sbjct: 3 AQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFN 62 Query: 61 LYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIG 120 ++DTAGQE + LR Y +I F V + +++NV W +L N+P +L G Sbjct: 63 VWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNV-PNWHRDLVRVCENIPIVLCG 121 Query: 121 TQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAII 180 ++D++D + ++K Y + SA + + F Sbjct: 122 NKVDIKDRKVKAKSIVFHRKK---------------NLQYYDISAKSNYNFEKPFLWLAR 166 Query: 181 AIL 183 ++ Sbjct: 167 KLI 169 >2CJW-A nrPDB Length = 192 Score = 163 bits (412), Expect = 7e-41, Method: Composition-based stats. Identities = 42/200 (21%), Positives = 87/200 (43%), Gaps = 24/200 (12%) Query: 6 GALMLKCVVVGDGAVGKTCLLMSY--ANDAFPEEYVPTVFDHYAVSVTVGGKQ---YLLG 60 G + V++G+ VGK+ L + +D+ + D Y ++ V G+ LL Sbjct: 3 GMTYYRVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILLD 62 Query: 61 LYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELK-EYAPNVPFLLI 119 +++ G+ + L + D +LI +S+ + ASF+ E + + ++P +L+ Sbjct: 63 MWENKGENE--WLHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIPIILV 120 Query: 120 GTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAI 179 G + DL ++ + V V +G+ A + C ++E SA Q +K +F+ + Sbjct: 121 GNKSDL------------VRCREVSVSEGRACAV-VFDCKFIETSAAVQHNVKELFEGIV 167 Query: 180 IAILTPKKHTVKKRIGSRCI 199 + + K R + Sbjct: 168 RQV---RLRRDSKEKNERRL 184 >3Q85-A nrPDB Length = 169 Score = 161 bits (408), Expect = 2e-40, Method: Composition-based stats. Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 18/182 (9%) Query: 9 MLKCVVVGDGAVGKTCLLMSYANDAFPEEYV-PTVFDHYAVSVTVGGKQYLLGLYDTAGQ 67 + K ++VG+ VGK+ L ++ + D Y + V ++ L +YD Q Sbjct: 2 VFKVMLVGESGVGKSTLAGTFGGLQGDHAHEMENSEDTYERRIMVDKEEVTLIVYDIWEQ 61 Query: 68 ED-YDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAP--NVPFLLIGTQID 124 D L+ D FLI FSV + SF V E + L+ P ++P +L+G + D Sbjct: 62 GDAGGWLQDHCLQTGDAFLIVFSVTDRRSFSKVPET-LLRLRAGRPHHDLPVILVGNKSD 120 Query: 125 LRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILT 184 L + + V +E+G+ LA + +C ++E SA + +F+ A+ I Sbjct: 121 L------------ARSREVSLEEGRHLAGTL-SCKHIETSAALHHNTRELFEGAVRQIRL 167 Query: 185 PK 186 + Sbjct: 168 RR 169 >5XC3-A nrPDB Length = 176 Score = 160 bits (405), Expect = 4e-40, Method: Composition-based stats. Identities = 37/175 (21%), Positives = 74/175 (42%), Gaps = 16/175 (9%) Query: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTV--GGKQYLLGLYDTAGQ 67 K +++G VGK+ ++ + + PT+ +A + GK L ++DTAGQ Sbjct: 6 YKIILIGSSGVGKSSIVHQFLFNRKISNVSPTIGAAFASKQVIAKNGKTLKLNIWDTAGQ 65 Query: 68 EDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLL-IGTQIDLR 126 E + + + Y + L+ F V + SF +V W+ +L+ ++L + +ID+ Sbjct: 66 ERFRSITKMYYTNSLGCLVVFDVTDRESFDDVY-YWINDLRINCHTTYYILVVANKIDID 124 Query: 127 DDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIA 181 + V + +K ++ C YV S+ + +F + I Sbjct: 125 KNNWR-----------VSENEIKKFCRD-NDCDYVFASSFESDTVNNLFGKMIDK 167 >3WYF-A nrPDB Length = 219 Score = 156 bits (396), Expect = 5e-39, Method: Composition-based stats. Identities = 38/175 (21%), Positives = 71/175 (40%), Gaps = 17/175 (9%) Query: 9 MLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDH-YAVSVTVGGKQYLLGLYDTAGQ 67 K V+VGDG GKT + + F ++Y+ T+ + +S + ++DTAG Sbjct: 12 TFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFGEIKFDVWDTAGL 71 Query: 68 EDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRD 127 E + LR Y +I F V + +++NV W +L N+P +L G ++D+++ Sbjct: 72 EKFGGLRDGYYINAQCAIIMFDVTSRITYKNV-PNWHRDLVRVCENIPIVLCGNKVDVKE 130 Query: 128 DPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI 182 + ++K Y + SA + + F + Sbjct: 131 RKVKAKTITFHRKK---------------NLQYYDISAKSNYNFEKPFLWLARKL 170 >5XOJ-A nrPDB Length = 182 Score = 155 bits (393), Expect = 1e-38, Method: Composition-based stats. Identities = 38/175 (21%), Positives = 71/175 (40%), Gaps = 17/175 (9%) Query: 9 MLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDH-YAVSVTVGGKQYLLGLYDTAGQ 67 K V+VGDG GKT + + F ++Y+ T+ + +S + ++DTAG Sbjct: 12 TFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFGEIKFDVWDTAGL 71 Query: 68 EDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRD 127 E + LR Y +I F V + +++NV W +L N+P +L G ++D+++ Sbjct: 72 EKFGGLRDGYYINAQCAIIMFDVTSRITYKNV-PNWHRDLVRVCENIPIVLCGNKVDVKE 130 Query: 128 DPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI 182 + ++K Y + SA + + F + Sbjct: 131 RKVKAKTITFHRKK---------------NLQYYDISAKSNYNFEKPFLWLARKL 170 >3Q72-A nrPDB Length = 166 Score = 153 bits (388), Expect = 4e-38, Method: Composition-based stats. Identities = 41/179 (22%), Positives = 77/179 (43%), Gaps = 15/179 (8%) Query: 9 MLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQE 68 + K +++G VGK+ L + E Y S+ V G++ L +YD Q+ Sbjct: 2 VYKVLLLGAPGVGKSALARIFGGVEDGPEAEAA-GHTYDRSIVVDGEEASLMVYDIWEQD 60 Query: 69 DYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELK-EYAPNVPFLLIGTQIDLRD 127 L M D ++I +SV + SF+ E V + +VP +L+G + DL Sbjct: 61 GGRWLPGHCMAMGDAYVIVYSVTDKGSFEKASELRVQLRRARQTDDVPIILVGNKSDL-- 118 Query: 128 DPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILTPK 186 ++ + V V++G+ A + C ++E SA ++ +F+ + I + Sbjct: 119 ----------VRSREVSVDEGRACAV-VFDCKFIETSAALHHNVQALFEGVVRQIRLRR 166 >2NZJ-A nrPDB Length = 175 Score = 153 bits (388), Expect = 4e-38, Method: Composition-based stats. Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 16/173 (9%) Query: 7 ALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAG 66 + + V++GD VGKT L +A + + D Y ++TV G+ L + DT Sbjct: 2 MALYRVVLLGDPGVGKTSLASLFAGKQERDLHEQLGEDVYERTLTVDGEDTTLVVVDTWE 61 Query: 67 QEDYDRLRPL--SYPMTDVFLICFSVVNPASFQNVKEEWVPELKEY-APNVPFLLIGTQI 123 E D+ ++I +S+ + SF++ E + + + A +VP +L+G + Sbjct: 62 AEKLDKSWSQESCLQGGSAYVIVYSIADRGSFESASELRIQLRRTHQADHVPIILVGNKA 121 Query: 124 DLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFD 176 DL + + V VE+G+ A + C ++E SA Q + +F+ Sbjct: 122 DL------------ARCREVSVEEGRACAV-VFDCKFIETSATLQHNVAELFE 161 >3E5H-A nrPDB Length = 178 Score = 152 bits (384), Expect = 1e-37, Method: Composition-based stats. Identities = 48/186 (25%), Positives = 81/186 (43%), Gaps = 20/186 (10%) Query: 4 GPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVF-DHYAVSVTVGGK-QYLLGL 61 G LK VV+GDGA GKT L +A + F ++Y T+ D + +T+ G L + Sbjct: 1 GSHMRQLKIVVLGDGASGKTSLTTCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQI 60 Query: 62 YDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEW---VPELKEYAPNVPFL- 117 +D GQ ++ L+ + + N SF+N+ E+W V ++ E + P + Sbjct: 61 WDIGGQTIGGKMLDKYIYGAQGVLLVYDITNYQSFENL-EDWYTVVKKVSEESETQPLVA 119 Query: 118 LIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDE 177 L+G +IDL + + E+ + +E G + SA T + F + Sbjct: 120 LVGNKIDLE------------HMRTIKPEKHLRFCQENGFSSHF-VSAKTGDSVFLCFQK 166 Query: 178 AIIAIL 183 IL Sbjct: 167 VAAEIL 172 >3CLV-A nrPDB Length = 208 Score = 144 bits (365), Expect = 2e-35, Method: Composition-based stats. Identities = 42/211 (19%), Positives = 76/211 (36%), Gaps = 54/211 (25%) Query: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHY----------------------- 46 K V++G+ +VGK+ +++ D F E T+ + Sbjct: 8 YKTVLLGESSVGKSSIVLRLTKDTFHENTNTTIGASFCTYVVNLNDINIKNNSNNEKNNN 67 Query: 47 ------AVSVTVGGK---------QYLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVV 91 +V + + ++DTAGQE Y + PL Y ++ F + Sbjct: 68 INSINDDNNVIITNQHNNYNENLCNIKFDIWDTAGQERYASIVPLYYRGATCAIVVFDIS 127 Query: 92 NPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKL 151 N + K WV +LK + N +L+ +ID V + + QK Sbjct: 128 NSNTLDRAKT-WVNQLK-ISSNYIIILVANKIDKNKF-------------QVDILEVQKY 172 Query: 152 AKEIGACCYVECSALTQKGLKTVFDEAIIAI 182 A++ +++ SA T +K +F I Sbjct: 173 AQD-NNLLFIQTSAKTGTNIKNIFYMLAEEI 202 >4DJT-A nrPDB Length = 218 Score = 142 bits (359), Expect = 1e-34, Method: Composition-based stats. Identities = 47/185 (25%), Positives = 72/185 (38%), Gaps = 22/185 (11%) Query: 4 GPGA-----LMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVF--DHYAVSVTVGGKQ 56 GPG+ L K ++GDG VGKT + + F + Y TV +H + G Sbjct: 1 GPGSMERRELTYKICLIGDGGVGKTTYINRVLDGRFEKNYNATVGAVNHPVTFLDDQGNV 60 Query: 57 YLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPN-VP 115 ++DTAGQE L+ + Y ++ F V + + QN+ WV E + N P Sbjct: 61 IKFNVWDTAGQEKKAVLKDVYYIGASGAILFFDVTSRITCQNLA-RWVKEFQAVVGNEAP 119 Query: 116 FLLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVF 175 ++ +ID+++ K +L K E Y E SA T F Sbjct: 120 IVVCANKIDIKNRQKISKKLVMEVLKGKNYE-------------YFEISAKTAHNFGLPF 166 Query: 176 DEAII 180 Sbjct: 167 LHLAR 171 >3C5C-A nrPDB Length = 187 Score = 134 bits (338), Expect = 2e-32, Method: Composition-based stats. Identities = 48/185 (25%), Positives = 76/185 (41%), Gaps = 22/185 (11%) Query: 6 GALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTA 65 G L + ++G GK+ L + + F EY P + D Y+ TV + L + DTA Sbjct: 18 GPLEVNLAILGRRGAGKSALTVKFLTKRFISEYDPNLEDTYSSEETVDHQPVHLRVMDTA 77 Query: 66 GQEDYDRLRPL--SYPMTDVFLICFSVV---NPASFQNVKEEWVPELKEYAPNVPFLLIG 120 D D R FL+ +SV + S + E KE ++P LL+G Sbjct: 78 ---DLDTPRNCERYLNWAHAFLVVYSVDSRQSFDSSSSYLELLALHAKETQRSIPALLLG 134 Query: 121 TQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSA-LTQKGLKTVFDEAI 179 ++D+ + + V +G LA G C + E SA L + ++ VF EA+ Sbjct: 135 NKLDM------------AQYRQVTKAEGVALAGRFG-CLFFEVSACLDFEHVQHVFHEAV 181 Query: 180 IAILT 184 Sbjct: 182 REARR 186 >3IHW-A nrPDB Length = 184 Score = 127 bits (319), Expect = 4e-30, Method: Composition-based stats. Identities = 40/181 (22%), Positives = 74/181 (40%), Gaps = 17/181 (9%) Query: 9 MLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQE 68 LK +VG+ + GK+ L+ Y + +E P + + V G+ YLL + D G Sbjct: 20 ELKVGIVGNLSSGKSALVHRYLTGTYVQEESPEGG-RFKKEIVVDGQSYLLLIRDEGGPP 78 Query: 69 DYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELK-EYAPNVPFLLIGTQIDLRD 127 + D + FS+ + SFQ V ++ A VP +L+GTQ Sbjct: 79 EL-----QFAAWVDAVVFVFSLEDEISFQTVYNYFLRLCSFRNASEVPMVLVGTQ----- 128 Query: 128 DPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILTPKK 187 ++ + + + +KL+ ++ C Y E A ++ VF + ++ +K Sbjct: 129 -----DAISAANPRVIDDSRARKLSTDLKRCTYYETCATYGLNVERVFQDVAQKVVALRK 183 Query: 188 H 188 Sbjct: 184 K 184 >5C1S-A nrPDB Length = 391 Score = 111 bits (277), Expect = 3e-25, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 72/181 (39%), Gaps = 18/181 (9%) Query: 7 ALMLKCVVVGDGAVGKTCLLMSYA-NDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTA 65 + ++ ++VGD VGKT + +A D +++ + + + +Y + + D Sbjct: 220 DIKIRMLMVGDQNVGKTTFIRKFALQDPTGHDFMNAITTRFEMEKI----KYEIIMIDWG 275 Query: 66 GQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDL 125 + P + LI + + N SFQN+ ++ P + +V +++G + DL Sbjct: 276 FYNKLLQTNPAISRTIEAILIVYDITNEESFQNIHRKYYPLINNKFSDVAGVIVGYKTDL 335 Query: 126 RDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILTP 185 ++ + + LA +G YVE S+ + ++ +I Sbjct: 336 EA------------QRKITMGDALTLADWLG-YKYVEMSSKDTEDHSSIIKALAHSIRIN 382 Query: 186 K 186 + Sbjct: 383 R 383 Score = 109 bits (274), Expect = 6e-25, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 70/180 (38%), Gaps = 21/180 (11%) Query: 6 GALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTA 65 G ++ +VVG VGKT L D F E + + V + + + D A Sbjct: 59 GKKEIRLLVVGSSGVGKTTLC-----DCFFESHQSQGEETREKHVQIDNDFIRISISDIA 113 Query: 66 GQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAP-NVPFLLIGTQID 124 GQ+ + Y D L+ + + SF ++K W+P++ Y + ++IG + D Sbjct: 114 GQQSFYAC-DNPYDGYDAILVMYDITELKSFTDLKTMWLPDIFLYCNIDTQIIIIGNKKD 172 Query: 125 LRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILT 184 D + + ++ ++ A++ C + E S + +FD L Sbjct: 173 QEID------------RIITRKEAEQFAQDR-LCQFYEISTKD-DSCQLLFDCISRDFLQ 218 >3D6T-B nrPDB Length = 171 Score = 105 bits (263), Expect = 1e-23, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 59/134 (44%), Gaps = 6/134 (4%) Query: 10 LKCVVVGDGAVGKTCLLMSYANDA-----FPEEYVPTVFDHYAVSVTVGGKQYL-LGLYD 63 +K ++VG+ GKT LL V + + + K+ L L ++D Sbjct: 1 MKLMIVGNTGSGKTTLLQQLMKTKKSDLGMQSATVGIDVKDWPIQIRDKRKRDLVLNVWD 60 Query: 64 TAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQI 123 AG+E++ P ++L + + + + + W+ +K A + P +L+GT + Sbjct: 61 FAGREEFYSTHPHFMTQRALYLAVYDLSKGQAEVDAMKPWLFNIKARASSSPVILVGTHL 120 Query: 124 DLRDDPKTLARLND 137 D+ D+ + A ++ Sbjct: 121 DVSDEKQRKACMSK 134 >2IWR-A nrPDB Length = 178 Score = 102 bits (256), Expect = 9e-23, Method: Composition-based stats. Identities = 40/184 (21%), Positives = 73/184 (39%), Gaps = 19/184 (10%) Query: 9 MLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQE 68 L+ V+GD GK+ L+ + ++ + T + Y + V G+ +L+ + + AG Sbjct: 7 ELRLGVLGDARSGKSSLIHRFLTGSY-QVLEKTESEQYKKEMLVDGQTHLVLIREEAGAP 65 Query: 69 DYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEE--WVPELK-EYAPNVPFLLIGTQIDL 125 D D + FS+ + SFQ V + L+ E + L+GTQ Sbjct: 66 DAK-----FSGWADAVIFVFSLEDENSFQAVSRLHGQLSSLRGEGRGGLALALVGTQ--- 117 Query: 126 RDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILTP 185 R++ + V + + L ++ C Y E A + VF E ++T Sbjct: 118 -------DRISASSPRVVGDARARALCADMKRCSYYETCATYGLNVDRVFQEVAQKVVTL 170 Query: 186 KKHT 189 +K Sbjct: 171 RKQQ 174 >2YC4-C nrPDB Length = 208 Score = 86.0 bits (212), Expect = 9e-18, Method: Composition-based stats. Identities = 36/164 (21%), Positives = 62/164 (37%), Gaps = 22/164 (13%) Query: 11 KCVVVGDGAVGKTCLLMSYAND--AFPEEYVPTVFDHYAV---SVTVGGKQYLLGLYDTA 65 K VVG+ VGK+ L+ + + F ++Y T V ++ L L DTA Sbjct: 22 KVAVVGEATVGKSALISMFTSKGSKFLKDYAMTSGVEVVVAPVTIPDTTVSVELFLLDTA 81 Query: 66 GQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPN----VPFLLIGT 121 G + Y + ++ F V + SF++ K W LK P+ + +L+ Sbjct: 82 GSDLYKEQISQYWNGVYYAILVFDVSSMESFESCK-AWFELLKSARPDRERPLRAVLVAN 140 Query: 122 QIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSA 165 + DL + V ++ Q A + + SA Sbjct: 141 KTDL-----------PPQRHQVRLDMAQDWATT-NTLDFFDVSA 172 >2AL7-A nrPDB Length = 186 Score = 83.4 bits (205), Expect = 7e-17, Method: Composition-based stats. Identities = 24/137 (17%), Positives = 49/137 (35%), Gaps = 4/137 (2%) Query: 12 CVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYD 71 +VG GKT + A+ F E+ +PTV + + G + ++D GQ + Sbjct: 25 LTLVGLQYSGKTTFVNVIASGQFSEDMIPTVG--FNMRKVTKGN-VTIKIWDIGGQPRFR 81 Query: 72 RLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPEL-KEYAPNVPFLLIGTQIDLRDDPK 130 + + + + + + E L K +P L++G + DL + Sbjct: 82 SMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALD 141 Query: 131 TLARLNDMKEKPVCVEQ 147 + M + + Sbjct: 142 EKQLIEKMNLSAIQDRE 158 >4ILE-A nrPDB Length = 184 Score = 81.0 bits (199), Expect = 4e-16, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 46/137 (33%), Gaps = 4/137 (2%) Query: 12 CVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYD 71 +VG GKT + A+ F E+ +PTV +T G L +D GQ + Sbjct: 25 LTLVGLQYSGKTTFVNVIASGQFNEDMIPTVG-FNMRKITKGNVTIKL--WDIGGQPRFR 81 Query: 72 RLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPEL-KEYAPNVPFLLIGTQIDLRDDPK 130 + + + + K E L K +P L++G + DL Sbjct: 82 SMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDLPGALD 141 Query: 131 TLARLNDMKEKPVCVEQ 147 + M + + Sbjct: 142 EKELIEKMNLSAIQDRE 158 >6HLU-A nrPDB Length = 974 Score = 74.5 bits (182), Expect = 3e-14, Method: Composition-based stats. Identities = 32/190 (16%), Positives = 65/190 (34%), Gaps = 28/190 (14%) Query: 6 GALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVS-------VTVGG--KQ 56 +K ++GDG GKT LL + F + T + + K+ Sbjct: 477 HLQEIKVHLIGDGMAGKTSLLKQLIGETFDPKESQTHGLNVVTKQAPNIKGLENDDELKE 536 Query: 57 YLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSV-VNPASFQNVKEEWVPELKEYAPNVP 115 L +D GQE + V+++ + K W+ +++Y P Sbjct: 537 CLFHFWDFGGQEIMHASHQFFMTRSSVYMLLLDSRTDSN-----KHYWLRHIEKYGGKSP 591 Query: 116 FLLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVF 175 +++ +ID ++P + E+ +E + S G++++ Sbjct: 592 VIVVMNKID--ENPSYNIEQKKINERFPAIEN-----------RFHRISCKNGDGVESIA 638 Query: 176 DEAIIAILTP 185 A+L P Sbjct: 639 KSLKSAVLHP 648 >3DPU-A nrPDB Length = 535 Score = 74.5 bits (182), Expect = 3e-14, Method: Composition-based stats. Identities = 32/190 (16%), Positives = 65/190 (34%), Gaps = 28/190 (14%) Query: 6 GALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVS-------VTVGG--KQ 56 +K ++GDG GKT LL + F + T + + K+ Sbjct: 38 HLQEIKVHLIGDGMAGKTSLLKQLIGETFDPKESQTHGLNVVTKQAPNIKGLENDDELKE 97 Query: 57 YLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSV-VNPASFQNVKEEWVPELKEYAPNVP 115 L +D GQE + V+++ + K W+ +++Y P Sbjct: 98 CLFHFWDFGGQEIMHASHQFFMTRSSVYMLLLDSRTDSN-----KHYWLRHIEKYGGKSP 152 Query: 116 FLLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVF 175 +++ +ID ++P + E+ +E + S G++++ Sbjct: 153 VIVVMNKID--ENPSYNIEQKKINERFPAIEN-----------RFHRISCKNGDGVESIA 199 Query: 176 DEAIIAILTP 185 A+L P Sbjct: 200 KSLKSAVLHP 209 >4WNR-A nrPDB Length = 349 Score = 73.0 bits (178), Expect = 8e-14, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 43/117 (36%), Gaps = 5/117 (4%) Query: 9 MLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAV-SVTVGGKQYLLGLYDTAGQ 67 +K ++VGDG GKT LL + F T + K+ + +D GQ Sbjct: 41 EVKVLLVGDGEAGKTSLLKRLLGEGFDGNEHQTQGINIKKWGFKDKDKEIKVNFWDFGGQ 100 Query: 68 EDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQID 124 E ++++ + E W+ ++ + + P L+ +ID Sbjct: 101 EIMHATHQFFLSKRSLYILVLD--SRR--DEKAEYWLKHIRSFGGDSPVLVALNKID 153 >3LVQ-E nrPDB Length = 497 Score = 73.0 bits (178), Expect = 8e-14, Method: Composition-based stats. Identities = 25/129 (19%), Positives = 44/129 (34%), Gaps = 5/129 (3%) Query: 3 HGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLY 62 G ++ +++G A GKT +L +PTV +VT K ++ Sbjct: 316 EGLSNKEMRILMLGLDAAGKTTILYKLKLGQ-SVTTIPTVG-FNVETVTY--KNVKFNVW 371 Query: 63 DTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELK-EYAPNVPFLLIGT 121 D GQ+ L Y T + + ++E + + L+ Sbjct: 372 DVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFAN 431 Query: 122 QIDLRDDPK 130 + DL D K Sbjct: 432 KQDLPDAMK 440 >2A5F-A nrPDB Length = 175 Score = 72.6 bits (177), Expect = 1e-13, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 44/126 (34%), Gaps = 5/126 (3%) Query: 6 GALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTA 65 G ++ +++G A GKT +L +PTV +VT K ++D Sbjct: 10 GNKEMRILMLGLDAAGKTTILYKLKLGQ-SVTTIPTVG-FNVETVTY--KNVKFNVWDVG 65 Query: 66 GQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELK-EYAPNVPFLLIGTQID 124 GQ+ L Y T + + ++E + + L+ + D Sbjct: 66 GQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQD 125 Query: 125 LRDDPK 130 L D K Sbjct: 126 LPDAMK 131 >1YZG-A nrPDB Length = 179 Score = 71.4 bits (174), Expect = 2e-13, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 41/117 (35%), Gaps = 5/117 (4%) Query: 11 KCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDY 70 K ++VG GKT +L + + PT+ + V K ++D GQE Sbjct: 18 KVIIVGLDNAGKTTILYQFLMNEVVHT-SPTIGSNVEEIVV---KNTHFLMWDIGGQESL 73 Query: 71 DRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIGTQIDLR 126 Y T+ ++ ++ KEE L L+ + D++ Sbjct: 74 RSSWNTYYSNTEFIILVVDSIDRERLAITKEELYRMLAHEDLRKAAVLIFANKQDMK 130 >2H16-A nrPDB Length = 183 Score = 71.0 bits (173), Expect = 3e-13, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 57/162 (35%), Gaps = 15/162 (9%) Query: 11 KCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDY 70 K ++VG GKT +L ++ + PT+ + + + ++L ++D GQE Sbjct: 24 KVIIVGLDNAGKTTILYQFSMNEVVHT-SPTIGSN-VEEIVINNTRFL--MWDIGGQESL 79 Query: 71 DRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIGTQIDLRDDP 129 Y T+ ++ + +EE L L+ + D+++ Sbjct: 80 RSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVKECM 139 Query: 130 KTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGL 171 +K + Q A C ALT +GL Sbjct: 140 TVAEISQFLKLTSIKDHQWHIQA----------CCALTGEGL 171 >6BBQ-A nrPDB Length = 520 Score = 70.6 bits (172), Expect = 4e-13, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 43/126 (34%), Gaps = 5/126 (3%) Query: 6 GALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTA 65 G ++ +++G A GKT +L +PTV +VT K ++D Sbjct: 356 GNKEMRILMLGLDAAGKTTILYKLKLGQ-SVTTIPTVG-FNVETVTY--KNVKFNVWDVG 411 Query: 66 GQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELK-EYAPNVPFLLIGTQID 124 G + L Y T + + ++E + + L+ + D Sbjct: 412 GLDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQD 471 Query: 125 LRDDPK 130 L D K Sbjct: 472 LPDAMK 477 >4YLG-A nrPDB Length = 173 Score = 70.3 bits (171), Expect = 5e-13, Method: Composition-based stats. Identities = 33/170 (19%), Positives = 54/170 (31%), Gaps = 17/170 (10%) Query: 6 GALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTA 65 G ++ ++VG A GKT +L +PT+ + V TV K ++D Sbjct: 10 GKKEMRILMVGLDAAGKTSILYKLKLGEIVTT-IPTIG--FNVE-TVEYKNISFTVWDVG 65 Query: 66 GQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLI-GTQID 124 GQ+ L Y T + + +EE + L E LL+ + D Sbjct: 66 GQDKIRPLWRHYYQNTQAIIFVVDSNDRDRIGEAREELMKMLNEDEMRNAILLVFANKHD 125 Query: 125 LRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECS-ALTQKGLKT 173 L + + + Y + S A GL Sbjct: 126 LPQAMSISEVTEKLGLQTIK-----------NRKWYCQTSCATNGDGLYE 164 >5NZV-F nrPDB Length = 181 Score = 69.5 bits (169), Expect = 1e-12, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 46/123 (37%), Gaps = 5/123 (4%) Query: 6 GALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTA 65 G ++ ++VG GKT +L +PT+ + V TV K ++D Sbjct: 14 GNKEMRILMVGLDGAGKTTVLYKLKLGE-VITTIPTIG--FNVE-TVQYKNISFTVWDVG 69 Query: 66 GQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKE-YAPNVPFLLIGTQID 124 GQ+ L Y T+ + + + +E L E N +L+ + D Sbjct: 70 GQDRIRSLWRHYYRNTEGVIFVVDSNDRSRIGEAREVMQRMLNEDELRNAAWLVFANKQD 129 Query: 125 LRD 127 L + Sbjct: 130 LPE 132 >3O47-A nrPDB Length = 329 Score = 68.7 bits (167), Expect = 2e-12, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 5/123 (4%) Query: 6 GALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTA 65 G ++ ++VG A GKT +L +PT+ + V TV K ++D Sbjct: 162 GKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVE-TVEYKNISFTVWDVG 217 Query: 66 GQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPEL-KEYAPNVPFLLIGTQID 124 GQ+ L + T + + +EE + L ++ + L+ + D Sbjct: 218 GQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQD 277 Query: 125 LRD 127 L + Sbjct: 278 LPN 280 >1Z6X-A nrPDB Length = 180 Score = 68.7 bits (167), Expect = 2e-12, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 48/135 (35%), Gaps = 5/135 (3%) Query: 6 GALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTA 65 G ++ ++VG A GKT +L +PT+ + V TV K ++D Sbjct: 14 GKKQMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVE-TVEYKNICFTVWDVG 69 Query: 66 GQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVP-ELKEYAPNVPFLLIGTQID 124 GQ+ L + T + + Q V +E L + + LL + D Sbjct: 70 GQDRIRPLWKHYFQNTQGLIFVVDSNDRERIQEVADELQKMLLVDELRDAVLLLFANKQD 129 Query: 125 LRDDPKTLARLNDMK 139 L + + + Sbjct: 130 LPNAMAISEMTDKLG 144 >3LRP-A nrPDB Length = 181 Score = 68.7 bits (167), Expect = 2e-12, Method: Composition-based stats. Identities = 25/119 (21%), Positives = 46/119 (38%), Gaps = 5/119 (4%) Query: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQED 69 ++ ++VG A GKT +L +PT+ + V TV + ++D GQ+ Sbjct: 18 VRILMVGLDAAGKTTILYK-VKLGEVVTTIPTIG--FNVE-TVEFRNISFTVWDVGGQDK 73 Query: 70 YDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLI-GTQIDLRD 127 L Y TD + + + +EE + E +L+ + DL + Sbjct: 74 IRPLWRHYYSNTDGLIFVVDSNDRERIDDAREELHRMINEEELKDAIILVFANKQDLPN 132 >6FAE-B nrPDB Length = 213 Score = 67.2 bits (163), Expect = 5e-12, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 46/119 (38%), Gaps = 5/119 (4%) Query: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQED 69 ++ ++VG A GKT +L +PT+ + V TV K ++D GQ+ Sbjct: 50 MRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVE-TVEYKNISFTVWDVGGQDK 105 Query: 70 YDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPEL-KEYAPNVPFLLIGTQIDLRD 127 L + T + + +EE + L ++ + L+ + DL + Sbjct: 106 IRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPN 164 >5UF8-A nrPDB Length = 181 Score = 65.2 bits (158), Expect = 2e-11, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 45/123 (36%), Gaps = 5/123 (4%) Query: 6 GALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTA 65 G ++ ++VG A GKT +L +PT+ + V TV K ++D Sbjct: 14 GNKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVE-TVEYKNISFTVWDVG 69 Query: 66 GQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKE-YAPNVPFLLIGTQID 124 GQ+ L + T + + +EE L E + L+ + D Sbjct: 70 GQDKIRPLWRYYFQNTQGIIFVVDSNDRDRIAEAREELQQMLNEDELRDALLLVFANKQD 129 Query: 125 LRD 127 L + Sbjct: 130 LPN 132 >1X8L-A nrPDB Length = 351 Score = 65.2 bits (158), Expect = 2e-11, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 11/97 (11%) Query: 96 FQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEI 155 F++VKE W K + PN+ FL L+D P ++AR+ D K + EQ Q+L++ + Sbjct: 228 FEHVKEAWA---KRHDPNMLFLFYEDY--LKDLPGSIARIADFLGKKLSEEQIQRLSEHL 282 Query: 156 GACCYVECSALTQKGLKTVFDEAIIAILTPKKHTVKK 192 + A+ + + + IL +H ++K Sbjct: 283 NFEKFKNNGAVNMEDYREI------GILADGEHFIRK 313 >6DFF-C nrPDB Length = 193 Score = 64.9 bits (157), Expect = 2e-11, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 46/126 (36%), Gaps = 5/126 (3%) Query: 3 HGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLY 62 G ++ ++VG A GKT +L +PT+ + V TV K ++ Sbjct: 23 QGAMGSEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVE-TVEYKNISFTVW 78 Query: 63 DTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPEL-KEYAPNVPFLLIGT 121 D G + L + T + + +EE + L ++ + L+ Sbjct: 79 DVGGLDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFAN 138 Query: 122 QIDLRD 127 + DL + Sbjct: 139 KQDLPN 144 >3AQ4-A nrPDB Length = 184 Score = 64.9 bits (157), Expect = 2e-11, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 44/123 (35%), Gaps = 5/123 (4%) Query: 6 GALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTA 65 ++ ++VG A GKT +L +PT+ + V TV K ++D Sbjct: 17 AKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVE-TVEYKNISFTVWDVG 72 Query: 66 GQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKE-YAPNVPFLLIGTQID 124 GQ+ L + T + + ++E L E + L+ + D Sbjct: 73 GQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQD 132 Query: 125 LRD 127 L + Sbjct: 133 LPN 135 >1J2J-A nrPDB Length = 166 Score = 64.5 bits (156), Expect = 3e-11, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 45/119 (37%), Gaps = 5/119 (4%) Query: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQED 69 ++ ++VG A GKT +L +PT+ + V TV K ++D G + Sbjct: 3 MRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVE-TVEYKNISFTVWDVGGLDK 58 Query: 70 YDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPEL-KEYAPNVPFLLIGTQIDLRD 127 L + T + + +EE + L ++ + L+ + DL + Sbjct: 59 IRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPN 117 >2B6H-A nrPDB Length = 192 Score = 64.1 bits (155), Expect = 4e-11, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 5/123 (4%) Query: 6 GALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTA 65 G ++ ++VG A GKT +L +PT+ + V TV K ++D Sbjct: 26 GKKQMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVE-TVEYKNICFTVWDVG 81 Query: 66 GQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKE-YAPNVPFLLIGTQID 124 GQ+ L + T + + Q +E L+E + L+ + D Sbjct: 82 GQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAVLLVFANKQD 141 Query: 125 LRD 127 + + Sbjct: 142 MPN 144 >4C0K-A nrPDB Length = 423 Score = 62.9 bits (152), Expect = 1e-10, Method: Composition-based stats. Identities = 33/131 (25%), Positives = 56/131 (42%), Gaps = 18/131 (13%) Query: 9 MLKCVVVGDGAVGKTCL--------LMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLG 60 + KC V+G GKT + + F T + SV V G++ L Sbjct: 246 VYKCHVIGPKGSGKTGMCRGFLVEDMHKLIGKEFK-----TNVVNCINSVQVYGQEKHLI 300 Query: 61 LYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPN-VPFLLI 119 L D + D L+P DV + + NP SF+ V + +K YA + +P +++ Sbjct: 301 LRDIDVRHALDPLQPQEV-NCDVACLVYDSSNPRSFEYVARIY---IKYYAESKIPVMIV 356 Query: 120 GTQIDLRDDPK 130 GT+ D+ + + Sbjct: 357 GTKCDMDERRQ 367 >4ZI3-A nrPDB Length = 190 Score = 61.8 bits (149), Expect = 2e-10, Method: Composition-based stats. Identities = 35/186 (18%), Positives = 63/186 (33%), Gaps = 15/186 (8%) Query: 3 HGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLY 62 ++ +++G GKT LL A++ PT SV G + L ++ Sbjct: 11 KSAPDQEVRILLLGLDNAGKTTLLKQLASED-ISHITPTQG-FNIKSVQSQG--FKLNVW 66 Query: 63 DTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPN-VPFLLIGT 121 D GQ + TD+ + + F+ +E L+E + VP L+ Sbjct: 67 DIGGQRKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFAN 126 Query: 122 QIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIA 181 + DL + + + CSALT +G++ + Sbjct: 127 KQDLLTAAPASEIAEGLNLHTI--------RDRVWQIQ--SCSALTGEGVQDGMNWVCKN 176 Query: 182 ILTPKK 187 + KK Sbjct: 177 VNAKKK 182 >2H57-A nrPDB Length = 190 Score = 60.6 bits (146), Expect = 5e-10, Method: Composition-based stats. Identities = 25/134 (18%), Positives = 48/134 (35%), Gaps = 11/134 (8%) Query: 6 GALMLKCVVVGDGAVGKTCLLMSYA-NDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDT 64 G+ + + +G GKT ++ ++A + +PT+ ++D Sbjct: 18 GSKEVHVLCLGLDNSGKTTIINKLKPSNAQSQNILPTIGFSIEKF---KSSSLSFTVFDM 74 Query: 65 AGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEW-----VPELKEYAPNVPFLLI 119 +GQ Y L Y + + KEE P++K +P L Sbjct: 75 SGQGRYRNLWEHYYKEGQAIIFVIDSSDRLRMVVAKEELDTLLNHPDIKHRR--IPILFF 132 Query: 120 GTQIDLRDDPKTLA 133 ++DLRD ++ Sbjct: 133 ANKMDLRDAVTSVK 146 >1MOZ-A nrPDB Length = 183 Score = 60.2 bits (145), Expect = 6e-10, Method: Composition-based stats. Identities = 32/178 (17%), Positives = 56/178 (31%), Gaps = 17/178 (9%) Query: 7 ALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAG 66 L+ +++G GKT +L PT+ + V T+ K L ++D G Sbjct: 16 NKELRILILGLDGAGKTTILYRLQIGEVVTT-KPTIG--FNVE-TLSYKNLKLNVWDLGG 71 Query: 67 QEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIGTQIDL 125 Q Y T + + +E L+E + L+ + D Sbjct: 72 QTSIRPYWRCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQEEELQDAALLVFANKQD- 130 Query: 126 RDDPKTLARLNDMKEKPVCVE-QGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI 182 + + V E +L + V SA+ +G+ D I I Sbjct: 131 --------QPGALSASEVSKELNLVELKDRSWSI--VASSAIKGEGITEGLDWLIDVI 178 >1KSG-A nrPDB Length = 186 Score = 58.7 bits (141), Expect = 2e-09, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 45/119 (37%), Gaps = 5/119 (4%) Query: 8 LMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQ 67 L+ +++G GKT +L + N + PT+ ++ G + L ++D GQ Sbjct: 17 RELRLLMLGLDNAGKTTILKKF-NGEDVDTISPTLG-FNIKTLEHRG--FKLNIWDVGGQ 72 Query: 68 EDYDRLRPLSYPMTDVFLICFSVVNPASFQNV-KEEWVPELKEYAPNVPFLLIGTQIDL 125 + + TD + + Q+ +E ++E L+ + DL Sbjct: 73 KSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDL 131 >3BH6-A nrPDB Length = 164 Score = 58.3 bits (140), Expect = 2e-09, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 59/169 (34%), Gaps = 15/169 (8%) Query: 6 GALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTA 65 G ++ +++G GKT LL A++ PT SV G + L ++D Sbjct: 1 GGSEVRILLLGLDNAGKTTLLKQLASED-ISHITPTQG-FNIKSVQSQG--FKLNVWDIG 56 Query: 66 GQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPN-VPFLLIGTQID 124 G + TD+ + + F+ +E L+E + VP L+ + D Sbjct: 57 GLRKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANKQD 116 Query: 125 LRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKT 173 L + + + CSALT +G++ Sbjct: 117 LLTAAPASEIAEGLNLHTI--------RDRVWQIQ--SCSALTGEGVQD 155 >4V0N-A nrPDB Length = 169 Score = 57.9 bits (139), Expect = 3e-09, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 41/124 (33%), Gaps = 5/124 (4%) Query: 4 GPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYV-PTVFDHYAVSVTVGGKQYLLGLY 62 G + + +VVG GKT ++ V PTV + V V ++ Sbjct: 1 GAASKKVNVLVVGLDNSGKTTIIERLKPRPRQAAEVAPTVG--FTVD-EVEKGPLTFTVF 57 Query: 63 DTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKE-YAPNVPFLLIGT 121 D +G Y L Y D + + ++E LK VP L Sbjct: 58 DMSGAGRYRTLWEQYYREADAVVFVVDSADKLRMVVARDEMEHMLKHSNMRKVPILYFAN 117 Query: 122 QIDL 125 + DL Sbjct: 118 KKDL 121 >5EE5-B nrPDB Length = 171 Score = 57.2 bits (137), Expect = 5e-09, Method: Composition-based stats. Identities = 28/181 (15%), Positives = 52/181 (28%), Gaps = 16/181 (8%) Query: 4 GPGA-LMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLY 62 G ++ +++G GKT +L +PT+ +VT K ++ Sbjct: 1 GSHMTREMRILILGLDGAGKTTILYRLQVGEVVTT-IPTIG-FNVETVTY--KNLKFQVW 56 Query: 63 DTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIGT 121 D G Y TD + + K E V L+E ++ Sbjct: 57 DLGGLTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFAN 116 Query: 122 QIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIA 181 + D+ + N + L + SA GL + + Sbjct: 117 KQDMEQAMTSSEMANSLGL--------PALKDRKWQI--FKTSATKGTGLDEAMEWLVET 166 Query: 182 I 182 + Sbjct: 167 L 167 >2GAO-A nrPDB Length = 208 Score = 56.8 bits (136), Expect = 6e-09, Method: Composition-based stats. Identities = 41/176 (23%), Positives = 64/176 (36%), Gaps = 9/176 (5%) Query: 11 KCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDY 70 K V +G GKT LL +D ++VPT+ + +T+ G + +D G E Sbjct: 37 KLVFLGLDNAGKTTLLHMLKDDRLG-QHVPTLHPT-SEELTIAGMTFT--TFDLGGHEQA 92 Query: 71 DRLRPLSYPMTDVFLICFSVVNPASFQNVKEEW-VPELKEYAPNVPFLLIGTQIDLRDDP 129 R+ P + + + + K E E NVP L++G +ID D Sbjct: 93 RRVWKNYLPAINGIVFLVDCADHSRLVESKVELNALMTDETISNVPILILGNKIDRTDAI 152 Query: 130 KTLARLNDMKEKPVCVEQGQKLAKEIGACCYVE---CSALTQKGLKTVFDEAIIAI 182 +G KE+ A +E CS L ++G F I Sbjct: 153 SEEKLREIFGLYGQTTGKGNVTLKELNARP-MEVFMCSVLKRQGYGEGFRWLSQYI 207 >3GEH-A nrPDB Length = 462 Score = 55.6 bits (133), Expect = 2e-08, Method: Composition-based stats. Identities = 38/195 (19%), Positives = 67/195 (34%), Gaps = 50/195 (25%) Query: 10 LKCVVVGDGAVGKTCLLMSY--ANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAG- 66 LK +VG VGK+ LL ++ ++ A + T D + VGG + DTAG Sbjct: 225 LKVAIVGRPNVGKSSLLNAWSQSDRAIVTDLPGTTRDVVESQLVVGGIPV--QVLDTAGI 282 Query: 67 -----Q------EDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWV---PELKEYAP 112 Q E + D+ L+ W E+ E Sbjct: 283 RETSDQVEKIGVERSRQAAN----TADLVLLTID---------AATGWTTGDQEIYEQVK 329 Query: 113 NVPFLLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLK 172 + P +L+ +IDL + + + V +A ++G+ Sbjct: 330 HRPLILVMNKIDLVEKQLITSLEYPENITQI-----------------VHTAAAQKQGID 372 Query: 173 TVFDEAIIAILTPKK 187 ++ + AI+ I+ K Sbjct: 373 SL-ETAILEIVQTGK 386 >6CES-A nrPDB Length = 313 Score = 55.2 bits (132), Expect = 2e-08, Method: Composition-based stats. Identities = 21/151 (13%), Positives = 53/151 (35%), Gaps = 22/151 (14%) Query: 11 KCVVVGDGAVGKTCL-LMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYL------LGLYD 63 K +++G GKT + + +A Y+ ++ V L L+D Sbjct: 9 KVLLMGKSGSGKTSMRSIIFA------NYIARDTRRLGATIDVEHSHVRFLGNLVLNLWD 62 Query: 64 TAGQE-----DYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEW--VPELKEYAPNVPF 116 GQ+ + R + +V + F V + +++ + + + +P+ Sbjct: 63 CGGQDTFMENYFTSQRDNIFRNVEVLIYVFDVESRELEKDMHYYQSCLEAILQNSPDAKI 122 Query: 117 LLIGTQIDL--RDDPKTLARLNDMKEKPVCV 145 + ++DL D + + + + + Sbjct: 123 FCLVHKMDLVQEDQRDLIFKEREEDLRRLSR 153 >1XZP-A nrPDB Length = 482 Score = 54.8 bits (131), Expect = 2e-08, Method: Composition-based stats. Identities = 35/195 (17%), Positives = 71/195 (36%), Gaps = 32/195 (16%) Query: 10 LKCVVVGDGAVGKTCLLMSYA--NDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAG- 66 L+ V+VG VGK+ LL + A + T D + + + G L + DTAG Sbjct: 244 LRMVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISEEIVIRG--ILFRIVDTAGV 301 Query: 67 -------QEDYDRLRPL-SYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLL 118 E R L D+ L +P ++ ++ E N +L+ Sbjct: 302 RSETNDLVERLGIERTLQEIEKADIVLFVLDASSPLDEED------RKILERIKNKRYLV 355 Query: 119 IGTQID----LRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTV 174 + ++D + ++ D + +G+ L +++ Y E + + Sbjct: 356 VINKVDVVEKINEEEIKNKLGTDRHMVKISALKGEGL-EKLEESIYRET--------QEI 406 Query: 175 FDEAIIAILTPKKHT 189 F+ +++T + Sbjct: 407 FERGSDSLITNLRQK 421 >2GJ9-A nrPDB Length = 172 Score = 52.9 bits (126), Expect = 9e-08, Method: Composition-based stats. Identities = 27/154 (17%), Positives = 49/154 (31%), Gaps = 13/154 (8%) Query: 6 GALMLKCVVVGDGAVGKTCLLMSYANDA--FPEEYVPTVFDHYAVSVTVGGKQYLLGLYD 63 G+ +K V+ G GK+ LL + A + T D + + G L + D Sbjct: 1 GSHGMKVVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMP--LHIID 58 Query: 64 TAGQ-------EDYDRLRP-LSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVP 115 TAG E R D L + E W + +P Sbjct: 59 TAGLREASDEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDPA-EIWPEFIARLPAKLP 117 Query: 116 FLLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQ 149 ++ + D+ + ++ +N + G+ Sbjct: 118 ITVVRNKADITGETLGMSEVNGHALIRLSARTGE 151 >1M2O-B nrPDB Length = 190 Score = 52.9 bits (126), Expect = 9e-08, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 64/180 (35%), Gaps = 22/180 (12%) Query: 11 KCVVVGDGAVGKTCLLMSYANDAF---PEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQ 67 K + +G GKT LL ND + PT + + +G +D G Sbjct: 25 KLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEE-----LAIGN--IKFTTFDLGGH 77 Query: 68 EDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEW-----VPELKEYAPNVPFLLIGTQ 122 RL +P + + +P F + E + ELK +VPF+++G + Sbjct: 78 IQARRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELK----DVPFVILGNK 133 Query: 123 IDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI 182 ID + + + + Q++ + ++ CS + + G F I Sbjct: 134 IDAPNAVSEAELRSALGL--LNTTGSQRIEGQRPVEVFM-CSVVMRNGYLEAFQWLSQYI 190 >6GNI-B nrPDB Length = 167 Score = 52.5 bits (125), Expect = 1e-07, Method: Composition-based stats. Identities = 34/174 (19%), Positives = 63/174 (36%), Gaps = 22/174 (12%) Query: 11 KCVVVGDGAVGKTCLLMSYANDAF---PEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQ 67 K + +G GKT LL ND + PT + + +G +D G Sbjct: 3 KLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEE-----LAIGN--IKFTTFDLGGH 55 Query: 68 EDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEW-----VPELKEYAPNVPFLLIGTQ 122 RL +P + + +P F + E + ELK +VPF+++G + Sbjct: 56 IQARRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELK----DVPFVILGNK 111 Query: 123 IDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFD 176 ID + + + + Q++ + ++ CS + + G F Sbjct: 112 IDAPNAVSEAELRSALGL--LNTTGSQRIEGQRPVEVFM-CSVVMRNGYLEAFQ 162 >3J8G-X nrPDB Length = 490 Score = 52.5 bits (125), Expect = 1e-07, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 74/211 (35%), Gaps = 40/211 (18%) Query: 5 PGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYV--PTVFDHYAVSVTVGGKQYLLGLY 62 P +L +K +VG VGK+ L + Y T D + + G++Y+L Sbjct: 198 PQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLI-- 255 Query: 63 DTAG----------QEDYDRLRPLS-YPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA 111 DTAG E + ++ L +V ++ S Q++ + + Sbjct: 256 DTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLS--LLGFILNSG 313 Query: 112 PNVPFLLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYV---ECSALTQ 168 ++ ++ + D + V + + L +G + SAL Sbjct: 314 RSLVIVV--NKWD-------------GLSQEVKEQVKETLDFRLGFIDFARVHFISALHG 358 Query: 169 KGLKTVFDEAIIAILTPKKHTVKKRIGSRCI 199 G+ +F+ + + +R+G+ + Sbjct: 359 SGVGNLFES-----VREAYDSSTRRVGTSML 384 Score = 36.7 bits (84), Expect = 0.006, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 41/142 (28%), Gaps = 16/142 (11%) Query: 12 CVVVGDGAVGKTCLLMSY--ANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTA---G 66 +VG VGK+ L DA ++ D + G++ DT G Sbjct: 5 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGRE--FICIDTGGIDG 62 Query: 67 QEDYDRLRPLS-----YPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGT 121 ED R DV L V A E L+ P L+ Sbjct: 63 TEDGVETRMAEQSLLAIEEADVVLFM--VDARAGLMPADEAIAKHLRSREK--PTFLVAN 118 Query: 122 QIDLRDDPKTLARLNDMKEKPV 143 + D D + + + + Sbjct: 119 KTDGLDPDQAVVDFYSLGLGEI 140 >4ARZ-A nrPDB Length = 310 Score = 52.2 bits (124), Expect = 2e-07, Method: Composition-based stats. Identities = 24/154 (15%), Positives = 59/154 (38%), Gaps = 22/154 (14%) Query: 11 KCVVVGDGAVGKTCL-LMSYANDAFPEEYVPTVFDHYAVSVTVGGK------QYLLGLYD 63 K +++G GK+ + + + Y ++ V L L+D Sbjct: 8 KLLLMGRSGSGKSSMRSIIF------SNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWD 61 Query: 64 TAGQE-----DYDRLRPLSYPMTDVFLICFSVVNPASFQNVK--EEWVPELKEYAPNVPF 116 GQ+ + + + + M V + F V + ++++ + + +L++Y+P+ Sbjct: 62 CGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKI 121 Query: 117 LLIGTQIDL--RDDPKTLARLNDMKEKPVCVEQG 148 ++ ++DL D + L ++ E G Sbjct: 122 FVLLHKMDLVQLDKREELFQIMMKNLSETSSEFG 155 >5DE3-A nrPDB Length = 169 Score = 51.8 bits (123), Expect = 2e-07, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 65/181 (35%), Gaps = 31/181 (17%) Query: 11 KCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVF---DHYAVSVTVGGKQYLLGLYDTAGQ 67 + +V+G GKT +L A EE + T+ S++ G + L ++D GQ Sbjct: 2 RILVLGLDNAGKTTIL-----KALSEEDITTITPTQGFNIKSLSRDG--FNLKIWDIGGQ 54 Query: 68 EDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLIGTQIDL- 125 + + TD + + + E L+E VP L+ + DL Sbjct: 55 KSIRPYWRNYFDQTDALIYVIDSADSKRLSESEFELTELLQEEKMTGVPLLVFANKQDLV 114 Query: 126 ----RDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIA 181 D+ + L ++++P ++ CSA GLK + + Sbjct: 115 GALAADEIASTLDLTSIRDRPWQIQA---------------CSAKQGTGLKEGMEWMMKQ 159 Query: 182 I 182 + Sbjct: 160 V 160 >2X77-A nrPDB Length = 189 Score = 51.0 bits (121), Expect = 4e-07, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 39/124 (31%), Gaps = 5/124 (4%) Query: 5 PGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDT 64 P ++ +++G GKT +L + V TV T+ K ++D Sbjct: 18 PADRKIRVLMLGLDNAGKTSILYRLHLG----DVVTTVPTVGVNLETLQYKNISFEVWDL 73 Query: 65 AGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKE-YAPNVPFLLIGTQI 123 GQ + TD + + K E L E L+ + Sbjct: 74 GGQTGVRPYWRCYFSDTDAVIYVVDSTDRDRMGVAKHELYALLDEDELRKSLLLIFANKQ 133 Query: 124 DLRD 127 DL D Sbjct: 134 DLPD 137 >1F6B-A nrPDB Length = 198 Score = 51.0 bits (121), Expect = 4e-07, Method: Composition-based stats. Identities = 39/176 (22%), Positives = 64/176 (36%), Gaps = 9/176 (5%) Query: 11 KCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDY 70 K V +G GKT LL +D ++VPT+ + +T+ G + +D G Sbjct: 27 KLVFLGLDNAGKTTLLHMLKDDRLG-QHVPTLHPT-SEELTIAGMTFT--TFDLGGHIQA 82 Query: 71 DRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPEL-KEYAPNVPFLLIGTQIDLRDDP 129 R+ P + + + KEE + E NVP L++G +ID + Sbjct: 83 RRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAI 142 Query: 130 KTLARLNDMKEKPVCVEQGQKLAKEIGACC---YVECSALTQKGLKTVFDEAIIAI 182 +G KE+ A ++ CS L ++G F I Sbjct: 143 SEERLREMFGLYGQTTGKGSVSLKELNARPLEVFM-CSVLKRQGYGEGFRWMAQYI 197 >6IAE-A nrPDB Length = 223 Score = 49.8 bits (118), Expect = 8e-07, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 64/211 (30%), Gaps = 38/211 (18%) Query: 2 AHGPGALMLKCVVVGDGAVGKTCLLMSY--ANDAFPEEYVPTV-FDHYAVSVTVGG---- 54 A ++K +V+G GK+ + D +EY T V + + Sbjct: 2 AASMSDDLVKILVLGPSKSGKSTVTNFLAGTRDTPTKEYHETNPLRVLEVEIALDDTRRS 61 Query: 55 -------KQYLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPEL 107 K+ ++ L+D G + P D + F+ S + + W Sbjct: 62 GRQAAGLKKAVVQLWDVGGSSKHQAGWPAIASNADGIIYVFNPEVKGSEKELL-LWYKN- 119 Query: 108 KEYAPNVPFLLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQ-KLA----------KEIG 156 F L Q +L DD R+ D + A K++ Sbjct: 120 --------FAL--NQDELDDDNNFKMRVTDGHSLIFSHHSSLPEFAVGDNAIPPMPKQLQ 169 Query: 157 ACCYVECSALTQ-KGLKTVFDEAIIAILTPK 186 +E S Q K FD + I+ + Sbjct: 170 GIRALETSLDYQSDNFKEAFDALVEQIIASR 200 >3T1O-A nrPDB Length = 198 Score = 49.8 bits (118), Expect = 9e-07, Method: Composition-based stats. Identities = 41/200 (20%), Positives = 63/200 (31%), Gaps = 33/200 (16%) Query: 4 GPGALMLKCVVVGDGAVGKTC-LLMSYAN------DAFP----EEYVPTVFDHYAVSV-T 51 + K V G G GKT L Y+ E+ FD + + Sbjct: 9 ANREINFKIVYYGPGLSGKTTNLKWIYSKVPEGRKGEMVSLATEDERTLFFDFLPLDIGE 68 Query: 52 VGGKQYLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVV------NPASFQNVKEEWVP 105 V G + LY GQ Y+ R L D + N S +N++E + Sbjct: 69 VKGFKTRFHLYTVPGQVFYNASRKLILRGVDGIVFVADSAPNRLRANAESMRNMREN-LA 127 Query: 106 ELKEYAPNVPFLLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSA 165 E +VP ++ + DL D L + V +G+ +E A Sbjct: 128 EYGLTLDDVPIVIQVNKRDLPD------ALPVEMVRAVVDPEGK--------FPVLEAVA 173 Query: 166 LTQKGLKTVFDEAIIAILTP 185 KG+ E +L Sbjct: 174 TEGKGVFETLKEVSRLVLAR 193 >2LKD-A nrPDB Length = 178 Score = 49.5 bits (117), Expect = 9e-07, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 64/165 (38%), Gaps = 20/165 (12%) Query: 21 GKTCLLMSYANDAFPEEYVPTVFDHYAV-SVTVGGKQYLLGLYDTAGQEDYDRLRPLSYP 79 GKT LL + + E+ + H VTV K+ DT G E + +R Sbjct: 20 GKTTLLDAIRHSKVTEQEAGGITQHIGAYQVTVNDKKITF--LDTPGHEAFTTMRARGAQ 77 Query: 80 MTDVFLICFSVVN---PASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLN 136 +TD+ ++ + + P + + + A NVP ++ ++D + Sbjct: 78 VTDIVILVVAADDGVMPQTVEAIN-------HAKAANVPIIVAINKMDKPEANPDRVMQE 130 Query: 137 DMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIA 181 M+ V E G G + + SA T++GL + + ++ Sbjct: 131 LMEYNLVPEEWG-------GDTIFCKLSAKTKEGLDHLLEMILLV 168 >2YWH-A nrPDB Length = 600 Score = 49.1 bits (116), Expect = 1e-06, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 55/185 (29%), Gaps = 35/185 (18%) Query: 21 GKTCLLMSY-------ANDAFPEEYVPTVFDHYAVSVTV------------GGKQYLLGL 61 GK+ L + E+ + T+ +TV G Y L L Sbjct: 18 GKSTLADRLLEYTGAISEREKREQLLDTLDVERERGITVKMQAVRMFYKAKDGNTYKLHL 77 Query: 62 YDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGT 121 DT G D+ + + L+ Q V W K ++ + + Sbjct: 78 IDTPGHVDFSYEVSRALAACEGALLLIDASQGIEAQTVANFW----KAVEQDLVIIPVIN 133 Query: 122 QIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIA 181 +IDL + + + E+ + SA G++ + + + Sbjct: 134 KIDLPSADVDRVKKQIEEVLGLDPEEA------------ILASAKEGIGIEEILEAIVNR 181 Query: 182 ILTPK 186 I PK Sbjct: 182 IPPPK 186 >5DI3-B nrPDB Length = 263 Score = 48.3 bits (114), Expect = 2e-06, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 42/121 (34%), Gaps = 5/121 (4%) Query: 6 GALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTA 65 G + ++G GKT LL S + PT + + GK Y + ++D Sbjct: 1 GPRKITIALLGLDNAGKTTLLNS-IQGEVDRDTTPTFG--FNSTTLNEGK-YKIEVFDLG 56 Query: 66 GQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPEL-KEYAPNVPFLLIGTQID 124 G ++ + + +P F+ K L ++ + P + + D Sbjct: 57 GGKNIRGVWKKYLAEVHAIVYVVDAADPGRFEESKMTMAEVLENQFMRDKPICIFANKQD 116 Query: 125 L 125 L Sbjct: 117 L 117 >4M9Q-A nrPDB Length = 227 Score = 48.3 bits (114), Expect = 2e-06, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 42/121 (34%), Gaps = 5/121 (4%) Query: 6 GALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTA 65 G + ++G GKT LL S + PT + + GK Y + ++D Sbjct: 1 GPRKITIALLGLDNAGKTTLLNS-IQGEVDRDTTPTFG--FNSTTLNEGK-YKIEVFDLG 56 Query: 66 GQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPEL-KEYAPNVPFLLIGTQID 124 G ++ + + +P F+ K L ++ + P + + D Sbjct: 57 GGKNIRGVWKKYLAEVHAIVYVVDAADPGRFEESKMTMAEVLENQFMRDKPICIFANKQD 116 Query: 125 L 125 L Sbjct: 117 L 117 >2DYK-A nrPDB Length = 161 Score = 47.1 bits (111), Expect = 5e-06, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 40/127 (31%), Gaps = 19/127 (14%) Query: 9 MLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAG-- 66 M K V+VG VGK+ L V + L DT G Sbjct: 1 MHKVVIVGRPNVGKSSLFNRLLKKRSAVVADVPGVTRDLKEGVVETDRGRFLLVDTGGLW 60 Query: 67 ---------QEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFL 117 QE DR + D ++ F+V A E L+ P + Sbjct: 61 SGDKWEKKIQEKVDR------ALEDAEVVLFAVDGRAELTQADYEVAEYLRRKGK--PVI 112 Query: 118 LIGTQID 124 L+ T++D Sbjct: 113 LVATKVD 119 >1MKY-A nrPDB Length = 439 Score = 46.8 bits (110), Expect = 6e-06, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 64/187 (34%), Gaps = 36/187 (19%) Query: 10 LKCVVVGDGAVGKTCLLMSYANDA--FPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQ 67 +K +VG VGK+ L + N T D V + G++Y+ DTAG Sbjct: 181 IKVAIVGRPNVGKSTLFNAILNKERALVSPIPGTTRDPVDDEVFIDGRKYVF--VDTAGL 238 Query: 68 EDYDRLRP------LSYP------MTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVP 115 R+ P +Y DV +I + Q+ + + E + A Sbjct: 239 RRKSRVEPRTVEKYSNYRVVDSIEKADVVVIVLDATQGITRQDQRMAGLMERRGRAS--- 295 Query: 116 FLLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKL-AKEIGACCY---VECSALTQKGL 171 +++ + DL + + ++ KL +++ Y + SA + Sbjct: 296 -VVVFNKWDL------------VVHREKRYDEFTKLFREKLYFIDYSPLIFTSADKGWNI 342 Query: 172 KTVFDEA 178 + D Sbjct: 343 DRMIDAM 349 Score = 41.4 bits (96), Expect = 3e-04, Method: Composition-based stats. Identities = 32/212 (15%), Positives = 57/212 (26%), Gaps = 48/212 (22%) Query: 12 CVVVGDGAVGKTCLLMSYANDA--FPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAG--- 66 ++VG VGK+ L E+ D +V GK + L DT G Sbjct: 4 VLIVGRPNVGKSTLFNKLVKKKKAIVEDEEGVTRDPVQDTVEWYGKTFKL--VDTCGVFD 61 Query: 67 ------QEDYDRLRPLSYPMTDVFLICFS----VVNP-ASFQNVKEEWVPELKEYAPNVP 115 + + D+ L + S + + V Sbjct: 62 NPQDIISQKMKEVTLNMIREADLVLFVVDGKRGITKEDESLADFLRK---------STVD 112 Query: 116 FLLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVE---CSALTQKGLK 172 +L+ + A E+ V E + + + E SA L Sbjct: 113 TILVANK----------AENLREFEREVKPE--------LYSLGFGEPIPVSAEHNINLD 154 Query: 173 TVFDEAIIAILTPKKHTVKKRIGSRCINCCLI 204 T+ + I + K + I ++ Sbjct: 155 TMLETIIKKLEEKGLDLESKPEITDAIKVAIV 186 >5KU1-A nrPDB Length = 424 Score = 46.8 bits (110), Expect = 7e-06, Method: Composition-based stats. Identities = 30/149 (20%), Positives = 60/149 (40%), Gaps = 19/149 (12%) Query: 9 MLKCVVVGDGAVGKT----CLLMSYA--NDAFPEEYVPTVFDHYAV-SVTVGGKQYLLGL 61 + +C V+G GK+ LL E++ +YA+ +V V G++ L L Sbjct: 242 VFRCNVIGVKNCGKSGVLQALLGRNLMRQKKIREDHKS----YYAINTVYVYGQEKYLLL 297 Query: 62 YDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGT 121 +D + E L DV + + V NP SF+ + +P L++ Sbjct: 298 HDISESE---FLTEAEII-CDVVCLVYDVSNPKSFEYCARIFKQHF--MDSRIPCLIVAA 351 Query: 122 QIDLRDDPK--TLARLNDMKEKPVCVEQG 148 + DL + + +++ + ++ + Q Sbjct: 352 KSDLHEVKQEYSISPTDFCRKHKMPPPQA 380 >5KSO-A nrPDB Length = 190 Score = 46.4 bits (109), Expect = 8e-06, Method: Composition-based stats. Identities = 30/149 (20%), Positives = 60/149 (40%), Gaps = 19/149 (12%) Query: 9 MLKCVVVGDGAVGKT----CLLMSYA--NDAFPEEYVPTVFDHYAV-SVTVGGKQYLLGL 61 + +C V+G GK+ LL E++ +YA+ +V V G++ L L Sbjct: 8 VFRCNVIGVKNCGKSGVLQALLGRNLMRQKKIREDHKS----YYAINTVYVYGQEKYLLL 63 Query: 62 YDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGT 121 +D + E L DV + + V NP SF+ + +P L++ Sbjct: 64 HDISESE---FLTEAEII-CDVVCLVYDVSNPKSFEYCARIFKQHF--MDSRIPCLIVAA 117 Query: 122 QIDLRDDPK--TLARLNDMKEKPVCVEQG 148 + DL + + +++ + ++ + Q Sbjct: 118 KSDLHEVKQEYSISPTDFCRKHKMPPPQA 146 >1WF3-A nrPDB Length = 301 Score = 45.6 bits (107), Expect = 1e-05, Method: Composition-based stats. Identities = 43/214 (20%), Positives = 71/214 (33%), Gaps = 42/214 (19%) Query: 1 MAHGPGALMLKCVVVGDGAVGKTCLLMSYAN-DAFPEEYVPTVFDHYAVSVTVGGKQYLL 59 MA + +VG VGK+ LL + P P + G++ + Sbjct: 1 MAEKTYSGF--VAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRR-QI 57 Query: 60 GLYDTAG-------------QEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPE 106 DT G QE Y+ L + + + +P + ++ E Sbjct: 58 VFVDTPGLHKPMDALGEFMDQEVYEALAD-----VNAVVWVVDLRHPPTPED--ELVARA 110 Query: 107 LKEYAPNVPFLLIGTQIDLRDDPKTLAR-------------LNDMKEKPVCVEQGQKLA- 152 LK VP LL+G ++D P+ + L+ + E+ V + LA Sbjct: 111 LKPLVGKVPILLVGNKLDAAKYPEEAMKAYHELLPEAEPRMLSALDERQVAELKADLLAL 170 Query: 153 KEIGACCYVECSALTQKGLKTVFDEAIIAILTPK 186 G Y E A + F E + IL + Sbjct: 171 MPEGPFFYPEDYAKS----DQTFGEWVAEILREE 200 >5J8B-z nrPDB Length = 679 Score = 45.2 bits (106), Expect = 2e-05, Method: Composition-based stats. Identities = 25/185 (13%), Positives = 61/185 (32%), Gaps = 35/185 (18%) Query: 21 GKTCLLMS-------YANDAFPEEYVPTVFDHYAVSVTV------------GGKQYLLGL 61 GK+ L ++ E+++ ++ +T+ G++Y+ L Sbjct: 90 GKSTLADRILELTHAVSDREMREQFLDSLELERERGITIKASAVRVTYRAKDGEEYVFHL 149 Query: 62 YDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGT 121 DT G D+ + + L+ + ++ L+ +P + Sbjct: 150 IDTPGHVDFTYEVSRALAAVEGVLLVVD-ASQGVEAETLAKFYMALEHGHVIIPVI---N 205 Query: 122 QIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIA 181 +IDL + L + + ++ + S T +G++ + + + Sbjct: 206 KIDLPNARPLEVALEVEEVLGLPADEA------------IFASGKTGEGVEEILEAIVQR 253 Query: 182 ILTPK 186 I PK Sbjct: 254 IPPPK 258 >5IMR-C nrPDB Length = 610 Score = 45.2 bits (106), Expect = 2e-05, Method: Composition-based stats. Identities = 25/185 (13%), Positives = 61/185 (32%), Gaps = 35/185 (18%) Query: 21 GKTCLLMS-------YANDAFPEEYVPTVFDHYAVSVTV------------GGKQYLLGL 61 GK+ L ++ E+++ ++ +T+ G++Y+ L Sbjct: 21 GKSTLADRILELTHAVSDREMREQFLDSLELERERGITIKASAVRVTYRAKDGEEYVFHL 80 Query: 62 YDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGT 121 DT G D+ + + L+ + ++ L+ +P + Sbjct: 81 IDTPGHVDFTYEVSRALAAVEGVLLVVD-ASQGVEAETLAKFYMALEHGHVIIPVI---N 136 Query: 122 QIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIA 181 +IDL + L + + ++ + S T +G++ + + + Sbjct: 137 KIDLPNARPLEVALEVEEVLGLPADEA------------IFASGKTGEGVEEILEAIVQR 184 Query: 182 ILTPK 186 I PK Sbjct: 185 IPPPK 189 >4BAS-A nrPDB Length = 199 Score = 45.2 bits (106), Expect = 2e-05, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 42/130 (32%), Gaps = 10/130 (7%) Query: 3 HGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLY 62 G L+ V+ G GKT ++ +++ T Y V T + ++ Sbjct: 11 MGQSKTKLQVVMCGLDNSGKTTIINQVKPAQSSSKHI-TATVGYNVE-TFEKGRVAFTVF 68 Query: 63 DTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA--------PNV 114 D G + + L Y D + + VK E LK V Sbjct: 69 DMGGAKKFRGLWETYYDNIDAVIFVVDSSDHLRLCVVKSEIQAMLKHEDIRRELPGGGRV 128 Query: 115 PFLLIGTQID 124 PFL ++D Sbjct: 129 PFLFFANKMD 138 >5DN8-A nrPDB Length = 446 Score = 44.8 bits (105), Expect = 3e-05, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 62/182 (34%), Gaps = 29/182 (15%) Query: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVP--TVFDHYAVSVTVGGKQYLLGLYDTAG- 66 +K ++G VGK+ L+ + Y T D + + Y L DTAG Sbjct: 179 IKIAMIGRPNVGKSTLINRLLGEERVIVYDQPGTTRDSIYIPFARNDENYTLI--DTAGI 236 Query: 67 ------Q---EDYDRLRPLS-YPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPF 116 Q E + ++ L DV + + Q++ + + E ++ Sbjct: 237 RRRAKIQDYVEKFSMIKSLQAMHAADVVIFLLDARQGVTEQDL--RLLNRIVEAGVSLII 294 Query: 117 LLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFD 176 + + D + + N + + V+ ++ ++ SAL G+ +F Sbjct: 295 AV--NKWDGLNIEERDNVRNAIDRRMPFVDFARRY--------FI--SALHGTGVGKLFR 342 Query: 177 EA 178 Sbjct: 343 AI 344 Score = 29.0 bits (64), Expect = 1.6, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 19/58 (32%), Gaps = 4/58 (6%) Query: 12 CVVVGDGAVGKTCLLMSYANDA--FPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQ 67 +VG VGK+ L + D T+ ++ L L DT G Sbjct: 8 IAIVGRPNVGKSTLFNYLTKSRAALVADVPGVTRDRQYGETTIDSQR--LLLVDTGGL 63 >5LAD-A nrPDB Length = 404 Score = 44.8 bits (105), Expect = 3e-05, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 44/125 (35%), Gaps = 20/125 (16%) Query: 12 CVVVGDGAVGKTCLLMSYAND--AFPEEYVPTVFD-HYAVSVTVGGKQYLLGLYDTAGQE 68 VV G VGK+ + + + EY T D Y L DT G + Sbjct: 12 IVVAGRRNVGKSSFMNALVGQNVSIVSEYAGTTTDPVYKSMELYPVGPVTL--VDTPGLD 69 Query: 69 DYDRL--------RPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIG 120 D L R + Y D ++ P +++ E+ +PF+++ Sbjct: 70 DVGELGRLRVEKARRVFYR-ADCGILVTD-SEPTPYEDDVVNLFKEM-----EIPFVVVV 122 Query: 121 TQIDL 125 +ID+ Sbjct: 123 NKIDV 127 >6G79-A nrPDB Length = 225 Score = 44.1 bits (103), Expect = 5e-05, Method: Composition-based stats. Identities = 27/206 (13%), Positives = 55/206 (26%), Gaps = 39/206 (18%) Query: 5 PGALMLKCVVVGDGAVGKTCLLMS----YANDAFPEEYVPTVFDHYAVSVTVGGKQYLLG 60 A +K +++G GK+ ++ + V H+ K Sbjct: 26 SAAKDVKLLLLGADNSGKSTIVKQMKIIHGGSGGSGGTTGIVETHFT------FKNLHFR 79 Query: 61 LYDTAGQ--EDYDRLRPLSYPMTDVFLICFSVVN----PAS---FQNVKEEWVPELKEYA 111 L+D GQ E + + + C + + S F ++ ++ Sbjct: 80 LFDVGGQRSERKKWI--HCFEDVTAIIFCVDLSDYNRMHESLMLFDSICNN------KFF 131 Query: 112 PNVPFLLIGTQIDLRDDPKTLARLN---DMKEKPVCVEQGQKL--------AKEIGACCY 160 + +L + DL + + L P E + Y Sbjct: 132 IDTSIILFLNKKDLFGEKIKKSPLTICFPEYTGPNTYEDAAAYIQAQFESKNRSPNKEIY 191 Query: 161 VE-CSALTQKGLKTVFDEAIIAILTP 185 A + +FD I+ Sbjct: 192 CHMTCATDTNNAQVIFDAVTDIIIAN 217 >2E87-A nrPDB Length = 357 Score = 43.7 bits (102), Expect = 6e-05, Method: Composition-based stats. Identities = 38/202 (18%), Positives = 68/202 (33%), Gaps = 44/202 (21%) Query: 12 CVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVG---GKQYLLGLYDTAGQE 68 V+ G VGK+ LL + P + VG + + DT G Sbjct: 170 VVIAGHPNVGKSTLLKALTTAKPEIASYP----FTTRGINVGQFEDGYFRYQIIDTPGLL 225 Query: 69 DYDRLRPLSYPM-------------TDVFLICFSVVNPASF---QNVKEEWVPELKEYAP 112 D RP+S ++ + F F + + E+ Sbjct: 226 D----RPISERNEIEKQAILALRYLGNLIIYIFDPSEHCGFPLEEQIH--LFEEVHGEFK 279 Query: 113 NVPFLLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLK 172 ++PFL++ +ID+ D+ +K KE G ++ SAL G+ Sbjct: 280 DLPFLVVINKIDVADEENIKRL--------------EKFVKEKGLNP-IKISALKGTGID 324 Query: 173 TVFDEAIIAILTPKKHTVKKRI 194 V +E I + + +++I Sbjct: 325 LVKEEIIKTLRPLAEKVAREKI 346 >2QAG-A nrPDB Length = 361 Score = 43.7 bits (102), Expect = 6e-05, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 30/80 (37%), Gaps = 10/80 (12%) Query: 8 LMLKCVVVGDGAVGKTCLLMS-YANDAFPEEYVPTVFDHYAVSVTVGGKQY--------- 57 +VVG+ +GK+ L+ S + D +PE +P + +V + Sbjct: 36 FEFTLMVVGESGLGKSTLINSLFLTDLYPERVIPGAAEKIERTVQIEASTVEIEERGVKL 95 Query: 58 LLGLYDTAGQEDYDRLRPLS 77 L + DT G D R Sbjct: 96 RLTVVDTPGYGDAINCRDCF 115 >3FTQ-A nrPDB Length = 274 Score = 43.3 bits (101), Expect = 7e-05, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 30/80 (37%), Gaps = 10/80 (12%) Query: 8 LMLKCVVVGDGAVGKTCLLMS-YANDAFPEEYVPTVFDHYAVSVTVGGKQY--------- 57 +VVG+ +GK+ L+ S + D +PE +P + +V + Sbjct: 4 FEFTLMVVGESGLGKSTLINSLFLTDLYPERIIPGAAEKIERTVQIEASTVEIEERGVKL 63 Query: 58 LLGLYDTAGQEDYDRLRPLS 77 L + DT G D R Sbjct: 64 RLTVVDTPGYGDAINCRDCF 83 >3GEE-A nrPDB Length = 476 Score = 43.3 bits (101), Expect = 7e-05, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 44/121 (36%), Gaps = 12/121 (9%) Query: 13 VVVGDGAVGKTCLLMSYA-NDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYD 71 V+ G GK+ LL + + ++P Y + K + L DTAG + Sbjct: 237 VIAGKPNAGKSTLLNTLLGQERAIVSHMPGTTRDYIEECFIHDKT-MFRLTDTAGLREAG 295 Query: 72 ------RLRPLSYPMTDVFLICF--SVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQI 123 +R M + LI + + + E + ELK P FL + ++ Sbjct: 296 EEIEHEGIRRSRMKMAEADLILYLLDLGTERLDDELTE--IRELKAAHPAAKFLTVANKL 353 Query: 124 D 124 D Sbjct: 354 D 354 >3T5D-A nrPDB Length = 274 Score = 41.7 bits (97), Expect = 2e-04, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 10/72 (13%) Query: 4 GPGALMLKCVVVGDGAVGKTCLLMS-YANDAFPEEY-------VPTVFDHYAVS-VTVGG 54 G G +VVG+ +GK+ L+ S + D + EY TV + + GG Sbjct: 4 GSG-FEFTLMVVGESGLGKSTLINSLFLTDLYSPEYPGPSHRIKKTVQVEQSKVLIKEGG 62 Query: 55 KQYLLGLYDTAG 66 Q LL + DT G Sbjct: 63 VQLLLTIVDTPG 74 >5YMX-A nrPDB Length = 203 Score = 41.7 bits (97), Expect = 2e-04, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 51/157 (32%), Gaps = 21/157 (13%) Query: 11 KCVVVGDGAVGKTCLLMSYANDAF-----------PEEYVPTVF-DHYAVSV-TVGGKQY 57 K V G G GKT L Y + E T+F D +S+ + G + Sbjct: 14 KIVYYGPGLCGKTTNL-QYIYNKTAAETKGKLISLSTETDRTLFFDFLPLSLGEIRGFKT 72 Query: 58 LLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSV------VNPASFQNVKEEWVPELKEYA 111 LY GQ YD R L D + N S +N++ + Sbjct: 73 RFHLYTVPGQVFYDASRKLILKGVDGVVFVADSQIERMEANMESLENLRINLAEQ-GYDL 131 Query: 112 PNVPFLLIGTQIDLRDDPKTLARLNDMKEKPVCVEQG 148 +P+++ + DL + + + + Q Sbjct: 132 NKIPYVIQYNKRDLPNAVTVEEMRKALNHRNIPEYQA 168 >3CB4-D nrPDB Length = 599 Score = 41.0 bits (95), Expect = 3e-04, Method: Composition-based stats. Identities = 28/133 (21%), Positives = 45/133 (33%), Gaps = 22/133 (16%) Query: 53 GGKQYLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSV---VNPASFQNVKEEWVPELKE 109 G+ Y L DT G D+ S + L+ V + N +L+ Sbjct: 67 DGETYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTAMEMDLEV 126 Query: 110 YAPNVPFLLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQK 169 VP L +IDL R+ + E V ++ + CSA T Sbjct: 127 ----VPVL---NKIDLPA--ADPERVAEEIEDIVGIDATDAVR----------CSAKTGV 167 Query: 170 GLKTVFDEAIIAI 182 G++ V + + I Sbjct: 168 GVQDVLERLVRDI 180 >2QAG-C nrPDB Length = 418 Score = 40.6 bits (94), Expect = 5e-04, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 9/68 (13%) Query: 8 LMLKCVVVGDGAVGKTCLLMS-YANDAFPEEY-------VPTVFDHYAVS-VTVGGKQYL 58 +VVG+ +GK+ L+ S + D + EY TV + + GG Q L Sbjct: 30 FEFTLMVVGESGLGKSTLINSLFLTDLYSPEYPGPSHRIKKTVQVEQSKVLIKEGGVQLL 89 Query: 59 LGLYDTAG 66 L + DT G Sbjct: 90 LTIVDTPG 97 >6GB2-BC nrPDB Length = 657 Score = 40.6 bits (94), Expect = 5e-04, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 57/161 (35%), Gaps = 31/161 (19%) Query: 21 GKTCLLMSYANDAFPEEYVPTVFD--------HYAVSVTVGGKQYLLGLYDTAGQEDYDR 72 GKT LL D F + V V + VS+ G++ DT G + Sbjct: 122 GKTTLL-----DKFRKTQVAAVETGGITQHIGAFLVSLP-SGEKITF--LDTPGHAAFSA 173 Query: 73 LRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPN--VPFLLIGTQIDLRDDPK 130 +R +TD+ ++ + + + E ++A + VP +L + D + Sbjct: 174 MRARGAQVTDIVVLVVAADDG------VMKQTVESIQHAKDAQVPIILAVNKCDKAEADP 227 Query: 131 TLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGL 171 + + VC + G G V SALT L Sbjct: 228 EKVKKELLAYDVVCEDYG-------GDVQAVPVSALTGDNL 261 >3JB9-B nrPDB Length = 984 Score = 40.2 bits (93), Expect = 6e-04, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 54/164 (32%), Gaps = 30/164 (18%) Query: 21 GKTCLL------------------MSYANDAFPEEYVPTVFDHYAVSVTV---GGKQYLL 59 GK+ LL + Y + + E +++ V GK + Sbjct: 153 GKSALLDLLVYYTHPDTKPPKRRSLRYTDTHYLERERVMSIKSTPLTLAVSDMKGKTFAF 212 Query: 60 GLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA--PNVPFL 117 DT G D+ ++D ++ V+ + V + ++A ++P + Sbjct: 213 QCIDTPGHVDFVDEVAAPMAISDGVVLVVDVI-----EGVMIN-TTRIIKHAILHDMPIV 266 Query: 118 LIGTQID-LRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCY 160 L+ ++D L + + K + V E + + Y Sbjct: 267 LVLNKVDRLILELRLPPNDAYHKLRHVIDEVNDNICQISKDLKY 310 >5CYO-A nrPDB Length = 274 Score = 39.8 bits (92), Expect = 8e-04, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 26/69 (37%), Gaps = 10/69 (14%) Query: 8 LMLKCVVVGDGAVGKTCLLMSYANDAFPEEYV-PTVFDHYAVSVTV---------GGKQY 57 +VVG +GK+ L+ + + V PT + ++ + G + Sbjct: 3 FEFNIMVVGQSGLGKSTLINTLFKSKISRKSVQPTSEERIPKTIEIKSITHDIEEKGVRM 62 Query: 58 LLGLYDTAG 66 L + DT G Sbjct: 63 KLTVIDTPG 71 >6GDG-D nrPDB Length = 248 Score = 39.8 bits (92), Expect = 8e-04, Method: Composition-based stats. Identities = 14/127 (11%), Positives = 33/127 (25%), Gaps = 17/127 (13%) Query: 11 KCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDY 70 + +++G GK+ ++ + V + ++D GQ D Sbjct: 37 RLLLLGADNSGKSTIVKQMRILHGGSGGSGGTSGIFETKFQVD--KVNFHMFDVGGQRDE 94 Query: 71 DRLRPLSYPMTDVFLICFSVVNPASFQNVK--------EEWVPELKEYAPNVPFLLIGTQ 122 R + + + Q W+ + +L + Sbjct: 95 RRKWIQCFNDVTAIIFVVDSSDYNRLQEALNLFKSIWNNRWLRTIS-------VILFLNK 147 Query: 123 IDLRDDP 129 DL + Sbjct: 148 QDLLAEK 154 >4KJZ-A nrPDB Length = 473 Score = 39.8 bits (92), Expect = 0.001, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 59/171 (34%), Gaps = 18/171 (10%) Query: 12 CVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYD 71 V++G GKT LL Y + E + + V Q + DT G E + Sbjct: 75 VVIMGHVDHGKTTLLD-YLRKSRIAEKEAGGITQHVGAFEVKTPQGTVVFIDTPGHEAFT 133 Query: 72 RLRPLSYPMTDVFLICFSVVN---PASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDD 128 +R + D+ +I + + P + + + K + +IDL Sbjct: 134 TIRQRGAKVADIAVIVIAADDGIMPQTEEAIAHAKAAGAK-------LIFAINKIDLPQA 186 Query: 129 PKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAI 179 + M+ V E G G + SA T +G++ + + + Sbjct: 187 DPEKVKRQLMERGFVPEEYG-------GDAIVIPISAKTGQGVQDLLEMIL 230 >4B44-A nrPDB Length = 363 Score = 39.4 bits (91), Expect = 0.001, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 59/171 (34%), Gaps = 18/171 (10%) Query: 12 CVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYD 71 V++G GKT LL Y + E + + V Q + DT G E + Sbjct: 76 VVIMGHVDHGKTTLLD-YLRKSRIAEKEAGGITQHVGAFEVKTPQGTVVFIDTPGHEAFT 134 Query: 72 RLRPLSYPMTDVFLICFSVVN---PASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDD 128 +R + D+ +I + + P + + + K + +IDL Sbjct: 135 TIRQRGAKVADIAVIVIAADDGIMPQTEEAIAHAKAAGAK-------LIFAINKIDLPQA 187 Query: 129 PKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAI 179 + M+ V E G G + SA T +G++ + + + Sbjct: 188 DPEKVKRQLMERGFVPEEYG-------GDAIVIPISAKTGQGVQDLLEMIL 231 >2GTP-A nrPDB Length = 323 Score = 39.1 bits (90), Expect = 0.001, Method: Composition-based stats. Identities = 27/192 (14%), Positives = 50/192 (26%), Gaps = 50/192 (26%) Query: 35 PEEYVPTVFDHYAVSVTVGG--------KQYLLGLYDTAGQ--EDYDRLRPLSYPMTDVF 84 Y+PT D V G K ++D GQ E + + Sbjct: 133 QPNYIPTQQDVLRTRVKTTGIVETHFTFKDLHFKMFDVGGQRSERKKWI--HCFEGVTAI 190 Query: 85 LIC-----FSVV------------NPASFQNV-KEEWVPELKEYAPNVPFLLIGTQIDLR 126 + C + +V + F ++ +W + +L + DL Sbjct: 191 IFCVALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFT-------DTSIILFLNKKDLF 243 Query: 127 DDPKTLARLN---DMKEKPVCVEQGQKL----------AKEIGACCYVECSALTQKGLKT 173 ++ + L E+ K+ A K ++ Sbjct: 244 EEKIKKSPLTICYPEYAGSNTYEEAAAYIQCQFEDLNKRKDTKEIYTHFTCATDTKNVQF 303 Query: 174 VFDEAIIAILTP 185 VFD I+ Sbjct: 304 VFDAVTDVIIKN 315 Score = 27.1 bits (59), Expect = 5.6, Method: Composition-based stats. Identities = 5/21 (23%), Positives = 12/21 (57%) Query: 8 LMLKCVVVGDGAVGKTCLLMS 28 +K +++G G GK+ ++ Sbjct: 1 REVKLLLLGAGESGKSTIVKQ 21 >3J4J-A nrPDB Length = 569 Score = 39.1 bits (90), Expect = 0.001, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 59/171 (34%), Gaps = 18/171 (10%) Query: 12 CVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYD 71 V++G GKT LL Y + E + + V Q + DT G E + Sbjct: 76 VVIMGHVDHGKTTLLD-YLRKSRIAEKEAGGITQHVGAFEVKTPQGTVVFIDTPGHEAFT 134 Query: 72 RLRPLSYPMTDVFLICFSVVN---PASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDD 128 +R + D+ +I + + P + + + K + +IDL Sbjct: 135 TIRQRGAKVADIAVIVIAADDGIMPQTEEAIAHAKAAGAK-------LIFAINKIDLPQA 187 Query: 129 PKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAI 179 + M+ V E G G + SA T +G++ + + + Sbjct: 188 DPEKVKRQLMERGFVPEEYG-------GDAIVIPISAKTGQGVQDLLEMIL 231 >3PR1-A nrPDB Length = 195 Score = 39.1 bits (90), Expect = 0.001, Method: Composition-based stats. Identities = 39/188 (20%), Positives = 71/188 (37%), Gaps = 36/188 (19%) Query: 5 PGALMLKCVVVGDGAVGKTCLLMSYANDA--FPEEYVPTVFDHYAVSVTVGGKQYLLGLY 62 P L + VG VGK+ LL + N F + T +++ + +Y Sbjct: 19 PPPLKGEVAFVGRSNVGKSSLLNALFNRKIAFVSK---TPGKTRSINFYLVNSKYYF--V 73 Query: 63 DTAGQ--------ED--YDRLRPLSYPMT----DVFLICFSVVNPASFQNVKEEWVPELK 108 D G E + RL + VFL+ + P + EW+ L Sbjct: 74 DLPGYGYAKVSKKERMLWKRLVEDYFKNRWSLQMVFLLVDGRIPPQDSDLMMVEWMKSL- 132 Query: 109 EYAPNVPFLLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQ 168 N+PF ++ T++D M E+ +E+ +K+ + G + S++T Sbjct: 133 ----NIPFTIVLTKMD----------KVKMSERAKKLEEHRKVFSKYGEYTIIPTSSVTG 178 Query: 169 KGLKTVFD 176 +G+ + D Sbjct: 179 EGISELLD 186 >5KUT-A nrPDB Length = 189 Score = 38.7 bits (89), Expect = 0.002, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 45/140 (32%), Gaps = 26/140 (18%) Query: 14 VVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAV-------SVTVGGKQYLLGLYD--T 64 VVG VGK+ L ++ + D +V V G++ L L + T Sbjct: 14 VVGACGVGKSAFLQAFLGRGLGHQ------DTREQPPGYAIDTVQVNGQEKYLILCEVGT 67 Query: 65 AGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEY--APNVPFLLIGTQ 122 G L DV + F +P SF + + K + P L + ++ Sbjct: 68 DGL-----LATSLDATCDVACLMFDGSDPKSFAHCASVY----KHHYMDGQTPCLFVSSK 118 Query: 123 IDLRDDPKTLARLNDMKEKP 142 DL + + Sbjct: 119 ADLPEGVAVSGPSPAEFCRK 138 >5YT0-A nrPDB Length = 364 Score = 38.3 bits (88), Expect = 0.003, Method: Composition-based stats. Identities = 30/144 (20%), Positives = 47/144 (32%), Gaps = 30/144 (20%) Query: 4 GPGALMLK---CVVVGDGAVGKTCLLMSY------------ANDAFPEEYVPTVFDHYAV 48 G G L+ VV+G GKT LL VP Sbjct: 8 GDGERRLRQPIVVVLGHVDHGKTTLLDKIRRTAVAAKEAGGITQHIGASIVPADVIEKIA 67 Query: 49 SVTVGGKQYLLGL-----YDTAGQEDYDRLRPLSYPMTDVFLICFSVV---NPASFQNVK 100 L + DT G E + LR + D ++ ++ P +++ + Sbjct: 68 EPLKKVIPVKLVIPGLLFIDTPGHELFSNLRRRGGSVADFAILVVDIMEGFKPQTYEAL- 126 Query: 101 EEWVPELKEYAPNVPFLLIGTQID 124 E + E + VPFL+ +ID Sbjct: 127 -ELLKERR-----VPFLIAANKID 144 >3R9W-A nrPDB Length = 307 Score = 38.3 bits (88), Expect = 0.003, Method: Composition-based stats. Identities = 28/184 (15%), Positives = 54/184 (29%), Gaps = 33/184 (17%) Query: 12 CVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGL--YDTAG-QE 68 +VG VGK+ LL + P + V + DT G E Sbjct: 12 VAIVGKPNVGKSTLLNNLL-GTKVSIISPKAGTTRMRVLGVKNIPNEAQIIFLDTPGIYE 70 Query: 69 DYDR---------LRPLSYPMTDVFLICFSVVN--PASFQNVKEEWVPELKEYAPNVPFL 117 + S DV L + + + ++ L N P + Sbjct: 71 PKKSDVLGHSMVEIAKQSLEEADVILFMIDATEGWRPRDEEIYQNFIKPL-----NKPVI 125 Query: 118 LIGTQID-LRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFD 176 ++ +ID + L ++++ +K + + + SAL L + Sbjct: 126 VVINKIDKIGPAKNVLPLIDEIHKKHPELTEIVPI------------SALKGANLDELVK 173 Query: 177 EAII 180 + Sbjct: 174 TILK 177 >3IEU-A nrPDB Length = 301 Score = 37.9 bits (87), Expect = 0.003, Method: Composition-based stats. Identities = 36/199 (18%), Positives = 56/199 (28%), Gaps = 34/199 (17%) Query: 12 CVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLY-DTAGQ--E 68 +VG VGK+ LL V + + +Y DT G E Sbjct: 11 IAIVGRPNVGKSTLLNKLLGQKISITSRKA-QTTRHRIVGIHTEGAYQAIYVDTPGLHME 69 Query: 69 DYDRLRP-----LSYPMTDVFLICFSVVNPASFQNVKEEWVPE-----LKEYAPNVPFLL 118 + + S + DV L+ F V W P+ K P +L Sbjct: 70 EKRAINRLMNKAASSSIGDVELVIFVVE--------GTRWTPDDEMVLNKLREGKAPVIL 121 Query: 119 IGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEA 178 ++D + L LA ++ V SA T + T+ Sbjct: 122 AVNKVDNVQEKADLLPHLQF------------LASQMNFLDIVPISAETGLNVDTIAAIV 169 Query: 179 IIAILTPKKHTVKKRIGSR 197 + H + I R Sbjct: 170 RKHLPEATHHFPEDYITDR 188 >5NON-A nrPDB Length = 165 Score = 37.5 bits (86), Expect = 0.004, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 9/51 (17%) Query: 5 PGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGK 55 PGA K ++GDG VG T L M++ FP EY + V + Sbjct: 46 PGAFE-KLEIIGDGGVG-TILDMTFVPGEFPHEYK-------EKFILVDNE 87 >2VNE-A nrPDB Length = 201 Score = 37.5 bits (86), Expect = 0.004, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 9/51 (17%) Query: 5 PGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGK 55 PGA K ++GDG VG T L M++ FP EY + V + Sbjct: 62 PGAFE-KLEIIGDGGVG-TILDMTFVPGEFPHEYK-------EKFILVDNE 103 >5FG3-A nrPDB Length = 623 Score = 37.5 bits (86), Expect = 0.004, Method: Composition-based stats. Identities = 30/144 (20%), Positives = 47/144 (32%), Gaps = 30/144 (20%) Query: 4 GPGALMLK---CVVVGDGAVGKTCLLMSY------------ANDAFPEEYVPTVFDHYAV 48 G G L+ VV+G GKT LL VP Sbjct: 8 GDGERRLRQPIVVVLGHVDHGKTTLLDKIRRTAVAAKEAGGITQHIGASIVPADVIEKIA 67 Query: 49 SVTVGGKQYLLGL-----YDTAGQEDYDRLRPLSYPMTDVFLICFSVV---NPASFQNVK 100 L + DT G E + LR + D ++ ++ P +++ + Sbjct: 68 EPLKKVIPVKLVIPGLLFIDTPGHELFSNLRRRGGSVADFAILVVDIMEGFKPQTYEAL- 126 Query: 101 EEWVPELKEYAPNVPFLLIGTQID 124 E + E + VPFL+ +ID Sbjct: 127 -ELLKERR-----VPFLIAANKID 144 >6D4G-A nrPDB Length = 271 Score = 37.5 bits (86), Expect = 0.004, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 34/105 (32%), Gaps = 19/105 (18%) Query: 82 DVFLICFSVVNP--ASFQNVKEEWVPELKEYAPNV--PFLLIGTQIDLRDDPKTLARLND 137 D FL+ V +F + + ++V L P +++ T+ D + Sbjct: 163 DGFLLGIDVSRGMNRNFDD-QLKFVSNLYNQLAKTKKPIVIVLTKCD------------E 209 Query: 138 MKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI 182 E+ + A VE SA + + F + I Sbjct: 210 GVERYI--RDAHTFALSKKNLQVVETSARSNVNVDLAFSTLVQLI 252 >3IZY-P nrPDB Length = 537 Score = 37.5 bits (86), Expect = 0.004, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 51/154 (33%), Gaps = 19/154 (12%) Query: 21 GKTCLLMSYANDAFPEEYVPTVFDHYAVSVTV--GGKQYLLGLYDTAGQEDYDRLRPLSY 78 GKT LL + H + G++ DT G + +R Sbjct: 16 GKTTLLDKLRKTQVAAMEAGGITQHIGAFLVSLPSGEKITF--LDTPGHAAFSAMRARGT 73 Query: 79 PMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPN--VPFLLIGTQIDLRDDPKTLARLN 136 +TD+ ++ + + + E ++A + VP +L + D + + Sbjct: 74 QVTDIVILVVAADDG------VMKQTVESIQHAKDAHVPIVLAINKCDKAEADPEKVKKE 127 Query: 137 DMKEKPVCVEQGQKLAKEIGACCYVECSALTQKG 170 + VC + G G V SALT + Sbjct: 128 LLAYDVVCEDYG-------GDVQAVHVSALTGEN 154 >3EC1-A nrPDB Length = 369 Score = 37.5 bits (86), Expect = 0.005, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 32/81 (39%), Gaps = 11/81 (13%) Query: 102 EWVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYV 161 ++P L +A + P LL+G + DL +L + +A+E+G C Sbjct: 87 SFIPGLPRFAADNPILLVGNKADLLPRSVKYPKLLRWMRR---------MAEELGLCPVD 137 Query: 162 EC--SALTQKGLKTVFDEAII 180 C SA G+ V + Sbjct: 138 VCLVSAAKGIGMAKVMEAINR 158 >4U00-A nrPDB Length = 244 Score = 37.1 bits (85), Expect = 0.006, Method: Composition-based stats. Identities = 36/174 (20%), Positives = 59/174 (33%), Gaps = 34/174 (19%) Query: 11 KCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDY 70 K V++G GK+ L+ + + D V V G D Sbjct: 32 KLVIIGPSGSGKSTLIR----------TINRLEDFQEGEVVVDGLSVK----------DD 71 Query: 71 DRLRPLSYPMTDVFLICFSVVNPAS-FQNVK------EEWVPELKEYAPNVPFLLIGTQI 123 LR + + VF F++ + +NV W E A L+ Sbjct: 72 RALREIRREVGMVFQQ-FNLFPHMTVLENVTLAPMRVRRWPRE---KAEKKALELLERVG 127 Query: 124 DLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVE-CSALTQKGLKTVFD 176 L K A+L+ +++ V + + LA E + E SAL + + V D Sbjct: 128 ILDQARKYPAQLSGGQQQRVAI--ARALAMEPKIMLFDEPTSALDPEMVGEVLD 179 >3C5H-A nrPDB Length = 255 Score = 36.7 bits (84), Expect = 0.006, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 34/105 (32%), Gaps = 19/105 (18%) Query: 82 DVFLICFSVVNP--ASFQNVKEEWVPELKEYAPNV--PFLLIGTQIDLRDDPKTLARLND 137 D FL+ V +F + + ++V L P +++ T+ D + Sbjct: 164 DGFLLGIDVSRGMNRNFDD-QLKFVSNLYNQLAKTKKPIVVVLTKCD------------E 210 Query: 138 MKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI 182 E+ + A VE SA + + F + I Sbjct: 211 GVERYI--RDAHTFALSKKNLQVVETSARSNVNVDLAFSTLVQLI 253 >4V8Y-CP nrPDB Length = 339 Score = 36.7 bits (84), Expect = 0.007, Method: Composition-based stats. Identities = 33/205 (16%), Positives = 70/205 (34%), Gaps = 52/205 (25%) Query: 12 CVVVGDGAVGKTCLLMSY------------ANDAFPEEYVPTVFDHYAVSVTVGGKQYLL 59 C ++G GKT LL Y P V ++ Sbjct: 8 CCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVMAEYEKQTF 67 Query: 60 GL-----YDTAGQEDYDRLRPLSYPMTDVFLICFSVV---NPASFQNVKEEWVPELKEYA 111 + DT G E + LR + ++ ++ ++ + +++ + + + K Sbjct: 68 DVPGLLVIDTPGHESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIESI--KLLRDRKA-- 123 Query: 112 PNVPFLLIGTQIDLRDDPKTLARLN-----DMKEKPVCVE-QGQ------KLAKE-IGAC 158 PF++ +ID D K + + + + V E Q + +LA++ + + Sbjct: 124 ---PFVVALNKIDRLYDWKAIPNNSFRDSFAKQSRAVQEEFQSRYSKIQLELAEQGLNSE 180 Query: 159 CYVE------------CSALTQKGL 171 Y + SA+T +G+ Sbjct: 181 LYFQNKNMSKYVSIVPTSAVTGEGV 205 >2CXX-A nrPDB Length = 190 Score = 36.7 bits (84), Expect = 0.007, Method: Composition-based stats. Identities = 29/207 (14%), Positives = 63/207 (30%), Gaps = 48/207 (23%) Query: 12 CVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAG----- 66 + G VGK+ L+ P V + + K + + D G Sbjct: 4 IIFAGRSNVGKSTLIYRLTGKKVRRGKRPGVT---RKIIEIEWKNHK--IIDMPGFGFMM 58 Query: 67 ------QEDYDRLRPLSY----PMTDVFLICFSVVNPASFQNVKEEWVPE---------- 106 QE DV ++ V+ + + + W Sbjct: 59 GLPKEVQERIKDEIVHFIEDNAKNIDVAVLV---VDGKAAPEIIKRWEKRGEIPIDVEFY 115 Query: 107 --LKEYAPNVPFLLIGTQID-LRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVEC 163 L+E ++P ++ ++D +++ + + L + E P+ EI ++ Sbjct: 116 QFLREL--DIPTIVAVNKLDKIKNVQEVINFLAEKFEVPLS---------EIDKV-FIPI 163 Query: 164 SALTQKGLKTVFDEAIIAILTPKKHTV 190 SA ++ + + I + V Sbjct: 164 SAKFGDNIERLKNRIFEVIRERQGRRV 190 >2ODE-A nrPDB Length = 350 Score = 36.7 bits (84), Expect = 0.008, Method: Composition-based stats. Identities = 27/190 (14%), Positives = 50/190 (26%), Gaps = 46/190 (24%) Query: 35 PEEYVPTVFDHYAVSVTVGG--------KQYLLGLYDTAGQEDYDRLRPLSYPMTDVFLI 86 Y+PT D V G K ++D GQ + + + Sbjct: 163 QSNYIPTQQDVLRTRVKTTGIVETHFTFKDLYFKMFDVGGQRSERKKWIHCFEGVTAIIF 222 Query: 87 C-----FSVV------------NPASFQNV-KEEWVPELKEYAPNVPFLLIGTQIDLRDD 128 C + +V + F ++ +W E +L + DL ++ Sbjct: 223 CVALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTETS-------IILFLNKKDLFEE 275 Query: 129 PKTLARLNDMKEKPV---CVEQGQKL----------AKEIGACCYVECSALTQKGLKTVF 175 + L + E+ K+ A K ++ VF Sbjct: 276 KIKRSPLTICYPEYTGSNTYEEAAAYIQCQFEDLNRRKDTKEIYTHFTCATDTKNVQFVF 335 Query: 176 DEAIIAILTP 185 D I+ Sbjct: 336 DAVTDVIIKN 345 Score = 27.1 bits (59), Expect = 5.6, Method: Composition-based stats. Identities = 6/23 (26%), Positives = 13/23 (56%) Query: 6 GALMLKCVVVGDGAVGKTCLLMS 28 A +K +++G G GK+ ++ Sbjct: 29 AAKEVKLLLLGAGESGKSTIVKQ 51 >5KH0-A nrPDB Length = 396 Score = 36.4 bits (83), Expect = 0.009, Method: Composition-based stats. Identities = 24/138 (17%), Positives = 42/138 (30%), Gaps = 22/138 (15%) Query: 12 CVVVGDGAVGKTCLLMSYANDA--FPEEYVPTVFD--HYAVSVTVGGKQYLLGLYDTAGQ 67 + G VGK+ + + T D ++ ++ G L DT G Sbjct: 11 IAITGRRNVGKSSFMNALIGQEVSIVSNVAGTTTDPVFKSMELSPVG-PITLI--DTPGL 67 Query: 68 EDYDRL--------RPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLI 119 +D L + Y LI + P +F+ + EL +P+ + Sbjct: 68 DDVGELGIKRIKKAKKSLYRADCGILIVDDI--PGNFEEQIIKLFKEL-----EIPYFIA 120 Query: 120 GTQIDLRDDPKTLARLND 137 +ID D Sbjct: 121 INKIDTIDHENIEKEYKK 138 >1PUJ-A nrPDB Length = 282 Score = 36.4 bits (83), Expect = 0.009, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 25/65 (38%), Gaps = 3/65 (4%) Query: 2 AHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGL 61 A G ++ +++G VGK+ L+ A + V VG + L L Sbjct: 113 AKGVKPRAIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKE---LEL 169 Query: 62 YDTAG 66 DT G Sbjct: 170 LDTPG 174 >3WBI-A nrPDB Length = 606 Score = 36.4 bits (83), Expect = 0.010, Method: Composition-based stats. Identities = 35/216 (16%), Positives = 73/216 (33%), Gaps = 55/216 (25%) Query: 4 GPGALMLK---CVVVGDGAVGKTCLLMSY------------ANDAFPEEYVPTVFDHYAV 48 G L+ C ++G GKT LL Y P Sbjct: 1 GSHMKDLRSPICCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKT 60 Query: 49 SVTVGGKQYLLGL-----YDTAGQEDYDRLRPLSYPMTDVFLICFSVV---NPASFQNVK 100 V ++ + DT G E + LR + ++ ++ ++ + +++ Sbjct: 61 KVMAEYEKQTFDVPGLLVIDTPGHESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIESI- 119 Query: 101 EEWVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLN-----DMKEKPVCVE-QGQ----- 149 + + + K PF++ +ID D K + + + + V E Q + Sbjct: 120 -KLLRDRKA-----PFVVALNKIDRLYDWKAIPNNSFRDSFAKQSRAVQEEFQSRYSKIQ 173 Query: 150 -KLAKE-IGACCYVE------------CSALTQKGL 171 +LA++ + + Y + SA+T +G+ Sbjct: 174 LELAEQGLNSELYFQNKNMSKYVSIVPTSAVTGEGV 209 >4NCF-A nrPDB Length = 457 Score = 36.4 bits (83), Expect = 0.010, Method: Composition-based stats. Identities = 33/205 (16%), Positives = 70/205 (34%), Gaps = 52/205 (25%) Query: 12 CVVVGDGAVGKTCLLMSY------------ANDAFPEEYVPTVFDHYAVSVTVGGKQYLL 59 C ++G GKT LL Y P V ++ Sbjct: 13 CCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVMAEYEKQTF 72 Query: 60 GL-----YDTAGQEDYDRLRPLSYPMTDVFLICFSVV---NPASFQNVKEEWVPELKEYA 111 + DT G E + LR + ++ ++ ++ + +++ + + + K Sbjct: 73 DVPGLLVIDTPGHESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIESI--KLLRDRKA-- 128 Query: 112 PNVPFLLIGTQIDLRDDPKTLARLN-----DMKEKPVCVE-QGQ------KLAKE-IGAC 158 PF++ +ID D K + + + + V E Q + +LA++ + + Sbjct: 129 ---PFVVALNKIDRLYDWKAIPNNSFRDSFAKQSRAVQEEFQSRYSKIQLELAEQGLNSE 185 Query: 159 CYVE------------CSALTQKGL 171 Y + SA+T +G+ Sbjct: 186 LYFQNKNMSKYVSIVPTSAVTGEGV 210 >3V00-C nrPDB Length = 356 Score = 36.4 bits (83), Expect = 0.010, Method: Composition-based stats. Identities = 29/194 (14%), Positives = 52/194 (26%), Gaps = 58/194 (29%) Query: 36 EEYVPTVFDHYAVSVTVGG--------KQYLLGLYDTAGQ--EDYDRLRPLSYPMTDVFL 85 YVPT D V G K ++D GQ E + + + Sbjct: 167 PGYVPTEQDVLRSRVKTTGIIETQFSFKDLNFRMFDVGGQRSERKKWI--HCFEGVTAII 224 Query: 86 IC-----FSVV------------NPASFQNV-KEEWVPELKEYAPNVPFLLIGTQIDLRD 127 C + +V + F ++ +W + +L + DL + Sbjct: 225 FCVALSDYDLVLAEDEEMNRMHESMHLFNSICNNKWFT-------DTSIILFLNKKDLFE 277 Query: 128 DPKTLARLN---DMKEKPVCVEQGQKLAKEIGACCYVE--------------CSALTQKG 170 + + L E+ A ++E A + Sbjct: 278 EKIKKSPLTICYPEYAGSNTYEE----AGNYIKVQFLELNMRRDVKEIYSHMTCATDTQN 333 Query: 171 LKTVFDEAIIAILT 184 +K VFD I+ Sbjct: 334 VKFVFDAVTDIIIK 347 Score = 27.9 bits (61), Expect = 3.3, Method: Composition-based stats. Identities = 6/22 (27%), Positives = 13/22 (59%) Query: 7 ALMLKCVVVGDGAVGKTCLLMS 28 A +K +++G G GK+ ++ Sbjct: 33 ARTVKLLLLGAGESGKSTIVKQ 54 >4V8Z-CV nrPDB Length = 586 Score = 36.0 bits (82), Expect = 0.011, Method: Composition-based stats. Identities = 33/205 (16%), Positives = 70/205 (34%), Gaps = 52/205 (25%) Query: 12 CVVVGDGAVGKTCLLMSY------------ANDAFPEEYVPTVFDHYAVSVTVGGKQYLL 59 C ++G GKT LL Y P V ++ Sbjct: 8 CCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVMAEYEKQTF 67 Query: 60 GL-----YDTAGQEDYDRLRPLSYPMTDVFLICFSVV---NPASFQNVKEEWVPELKEYA 111 + DT G E + LR + ++ ++ ++ + +++ + + + K Sbjct: 68 DVPGLLVIDTPGHESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIESI--KLLRDRKA-- 123 Query: 112 PNVPFLLIGTQIDLRDDPKTLARLN-----DMKEKPVCVE-QGQ------KLAKE-IGAC 158 PF++ +ID D K + + + + V E Q + +LA++ + + Sbjct: 124 ---PFVVALNKIDRLYDWKAIPNNSFRDSFAKQSRAVQEEFQSRYSKIQLELAEQGLNSE 180 Query: 159 CYVE------------CSALTQKGL 171 Y + SA+T +G+ Sbjct: 181 LYFQNKNMSKYVSIVPTSAVTGEGV 205 >5ZZM-A nrPDB Length = 426 Score = 35.6 bits (81), Expect = 0.017, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 57/189 (30%), Gaps = 45/189 (23%) Query: 12 CVVVGDGAVGKTCLLMS------YANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTA 65 +VG GK+ L YA D PT+ + V G+ L DT Sbjct: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTL---RRIDVADVGETVLA---DTV 253 Query: 66 GQED---------YDRLRPLSYPMTDVFLICFSVVNPASFQNVK--EEWVPELKEYAPNV 114 G + + L + +N++ + E+ + + Sbjct: 254 GFIRHLPHDLVAAFKA-TLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAH--EI 310 Query: 115 PFLLIGTQID-LRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKT 173 P LL+ +ID L D + R + K V + SA T G+ Sbjct: 311 PTLLVMNKIDMLEDFEPRIDRDEENKPNRVWL------------------SAQTGAGIPQ 352 Query: 174 VFDEAIIAI 182 +F + Sbjct: 353 LFQALTERL 361 >3LLU-A nrPDB Length = 196 Score = 35.6 bits (81), Expect = 0.017, Method: Composition-based stats. Identities = 21/182 (11%), Positives = 55/182 (30%), Gaps = 16/182 (8%) Query: 11 KCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGG----KQYLLGLYDTAG 66 + +++G GK+ + T+F + ++D G Sbjct: 22 RILLMGLRRSGKSS-IQKVVFHKMSPNE--TLFLESTNKIYKDDISNSSFVNFQIWDFPG 78 Query: 67 QEDYDRLR---PLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA--PNVPFLLIGT 121 Q D+ + + T + + + + + K Y P++ F + Sbjct: 79 QMDFFDPTFDYEMIFRGTGALIYVIDAQD-DYMEALTRLHITVSKAYKVNPDMNFEVFIH 137 Query: 122 QIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIA 181 ++D D + D+ ++ L K + S + + F + + Sbjct: 138 KVDGLSDDHKIETQRDIHQRANDDLADAGLEKLH--LSFYLTS-IYDHSIFEAFSKVVQK 194 Query: 182 IL 183 ++ Sbjct: 195 LI 196 >4V7F-o nrPDB Length = 647 Score = 35.2 bits (80), Expect = 0.019, Method: Composition-based stats. Identities = 28/194 (14%), Positives = 57/194 (29%), Gaps = 27/194 (13%) Query: 12 CVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGG---KQYLLGLYDTAG-- 66 ++ G VGK+ L + + S+ VG K DT G Sbjct: 170 LLICGYPNVGKSSFLRCITK----SDVDVQPYAFTTKSLYVGHFDYKYLRFQAIDTPGIL 225 Query: 67 ---QEDYDRLRPLS-YPMTD---VFLICFSVVNPASFQ-NVKEEWVPELKEYAPNVPFLL 118 E+ + + S Y + L + F + + +K N ++ Sbjct: 226 DRPTEEMNNIEMQSIYAIAHLRSCVLYFMDLSEQCGFTIEAQVKLFHSIKPLFANKSVMV 285 Query: 119 IGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEA 178 + + D+ + E KE+ + S ++ + V ++A Sbjct: 286 VINKTDIIRPEDLDEERAQLLESV----------KEVPGVEIMTSSCQLEENVMEVRNKA 335 Query: 179 IIAILTPKKHTVKK 192 +L + K Sbjct: 336 CEKLLASRIENKLK 349 >4KV9-A nrPDB Length = 412 Score = 34.8 bits (79), Expect = 0.025, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 29/72 (40%), Gaps = 9/72 (12%) Query: 5 PGALMLKCVVVGDGAVGKTCLLMSYANDAF---PEEYVPTVFDHYAVSVTVGGKQY---- 57 + + VG+ +GK+ LL + N F P + T D +VT K+ Sbjct: 37 SQGFVFNILCVGETGIGKSTLLETLFNQKFDFSPSTHDLT--DPKLKAVTYDLKEANVKL 94 Query: 58 LLGLYDTAGQED 69 L + +T G D Sbjct: 95 KLTVVETCGYGD 106 >4TN1-B nrPDB Length = 345 Score = 34.4 bits (78), Expect = 0.032, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 69/206 (33%), Gaps = 54/206 (26%) Query: 12 CVVVGDGAVGKTCLLMSY------------ANDAFPEEYVPTVFDHYAVSVTV--GGK-Q 56 C ++G GKT LL Y P V + V GK + Sbjct: 13 CCILGHVRTGKTKLLDKIRQTNVQEGEAGGITQQIGATYFP-VEAIKQKTAVVNKDGKFE 71 Query: 57 YL---LGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVV---NPASFQNVKEEWVPELKEY 110 + L + DT G E + LR + ++ ++ ++ P + +++ + E K Sbjct: 72 FKVPGLLIIDTPGHESFSNLRSRGSSLCNIAILVVDIMHGLEPQTIESL--RLLRERK-- 127 Query: 111 APNVPFLLIGTQID-----LRDDPKTLARLNDMKEKPVCVEQ-------GQKLAKE-IGA 157 PF++ +ID + + ++ K V E + A++ + Sbjct: 128 ---TPFVVALNKIDRLYGWKKIENNGFRESFALQNKAVQNEFRNRLDQVKLQFAEQGFNS 184 Query: 158 CCYVE------------CSALTQKGL 171 + E SA T +G+ Sbjct: 185 ELFYENKNFARYVSLVPTSAHTGEGI 210 >4UJC-AB nrPDB Length = 627 Score = 34.4 bits (78), Expect = 0.033, Method: Composition-based stats. Identities = 26/140 (18%), Positives = 51/140 (36%), Gaps = 35/140 (25%) Query: 59 LGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVV---NPASFQNVKEEWVPELKEYAPNVP 115 + + DT G E + LR + D+ ++ ++ P + +++ LK + P Sbjct: 105 MLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESI-----NLLK--SKKCP 157 Query: 116 FLLIGTQI----DLRDDPKTLARLNDMKEKPVCVEQGQKLAKEI---------GACCYVE 162 F++ +I D + P + K+K ++ ++ AK I A + E Sbjct: 158 FIVALNKIDRLYDWKKSPDSDVAATLKKQKKNTKDEFEERAKAIIVEFAQQGLNAALFYE 217 Query: 163 ------------CSALTQKG 170 SA T G Sbjct: 218 NKDPRTFVSLVPTSAHTGDG 237 >6OIK-A nrPDB Length = 354 Score = 34.4 bits (78), Expect = 0.034, Method: Composition-based stats. Identities = 28/188 (14%), Positives = 47/188 (25%), Gaps = 47/188 (25%) Query: 37 EYVPTVFDHYAVSVTVGG--------KQYLLGLYDTAGQ--EDYDRLRPLSYPMTDVFLI 86 +Y PT D V G K L+D GQ E + + + Sbjct: 167 DYQPTEQDILRTRVKTTGIVETHFTFKNLHFRLFDVGGQRSERKKWI--HCFEDVTAIIF 224 Query: 87 C-----FS-------VVNP--AS---FQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDP 129 C + N S F ++ ++ + +L + DL + Sbjct: 225 CVALSGYDQVLHEDETTNRMHESLMLFDSICNN------KFFIDTSIILFLNKKDLFGEK 278 Query: 130 KTLARLN---DMKEKPVCVEQGQKLAK--------EIGACCYVE-CSALTQKGLKTVFDE 177 + L P E + Y A ++ VFD Sbjct: 279 IKKSPLTICFPEYTGPNTYEDAAAYIQAQFESKNRSPNKEIYCHMTCATDTNNIQVVFDA 338 Query: 178 AIIAILTP 185 I+ Sbjct: 339 VTDIIIAN 346 Score = 29.0 bits (64), Expect = 1.5, Method: Composition-based stats. Identities = 21/96 (21%), Positives = 39/96 (40%), Gaps = 18/96 (18%) Query: 5 PGALMLKCVVVGDGAVGKTCLLMSYA---NDAF----PEEYVPTVFDHYAVSVTVGGKQY 57 A +K +++G G GK+ ++ D F ++Y P V+ + T+ Sbjct: 29 SAAKDVKLLLLGAGESGKSTIVKQMKIIHEDGFSGEDVKQYKPVVYSN-----TIQSLAA 83 Query: 58 LLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNP 93 ++ DT G E D+ D ++C VV+ Sbjct: 84 IVRAMDTLGIEYGDKE-----RKADAKMVC-DVVSR 113 >4NCL-A nrPDB Length = 457 Score = 34.4 bits (78), Expect = 0.036, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 69/206 (33%), Gaps = 54/206 (26%) Query: 12 CVVVGDGAVGKTCLLMSY------------ANDAFPEEYVPTVFDHYAVSVTV--GGK-Q 56 C ++G GKT LL Y P V + V GK + Sbjct: 13 CCILGHVDTGKTKLLDKIRQTNVQEGEAGGITQQIGATYFP-VEAIKQKTAVVNKDGKFE 71 Query: 57 YL---LGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVV---NPASFQNVKEEWVPELKEY 110 + L + DT G E + LR + ++ ++ ++ P + +++ + E K Sbjct: 72 FKVPGLLIIDTPGHESFSNLRSRGSSLCNIAILVVDIMHGLEPQTIESL--RLLRERK-- 127 Query: 111 APNVPFLLIGTQID-----LRDDPKTLARLNDMKEKPVCVEQ-------GQKLAKE-IGA 157 PF++ +ID + + ++ K V E + A++ + Sbjct: 128 ---TPFVVALNKIDRLYGWKKIENNGFRESFALQNKAVQNEFRNRLDQVKLQFAEQGFNS 184 Query: 158 CCYVE------------CSALTQKGL 171 + E SA T +G+ Sbjct: 185 ELFYENKNFARYVSLVPTSAHTGEGI 210 >4N3G-A nrPDB Length = 603 Score = 34.4 bits (78), Expect = 0.036, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 69/206 (33%), Gaps = 54/206 (26%) Query: 12 CVVVGDGAVGKTCLLMSY------------ANDAFPEEYVPTVFDHYAVSVTV--GGK-Q 56 C ++G GKT LL Y P V + V GK + Sbjct: 13 CCILGHVDTGKTKLLDKIRQTNVQEGEAGGITQQIGATYFP-VEAIKQKTAVVNKDGKFE 71 Query: 57 YL---LGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVV---NPASFQNVKEEWVPELKEY 110 + L + DT G E + LR + ++ ++ ++ P + +++ + E K Sbjct: 72 FKVPGLLIIDTPGHESFSNLRSRGSSLCNIAILVVDIMHGLEPQTIESL--RLLRERK-- 127 Query: 111 APNVPFLLIGTQID-----LRDDPKTLARLNDMKEKPVCVEQ-------GQKLAKE-IGA 157 PF++ +ID + + ++ K V E + A++ + Sbjct: 128 ---TPFVVALNKIDRLYGWKKIENNGFRESFALQNKAVQNEFRNRLDQVKLQFAEQGFNS 184 Query: 158 CCYVE------------CSALTQKGL 171 + E SA T +G+ Sbjct: 185 ELFYENKNFARYVSLVPTSAHTGEGI 210 >1ZCB-A nrPDB Length = 362 Score = 34.4 bits (78), Expect = 0.037, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 28/64 (43%), Gaps = 10/64 (15%) Query: 7 ALMLKCVVVGDGAVGKTCLLMSY-------ANDAFPEEYVPTVFDHYAV--SVTVGGKQY 57 A ++K +++G G GK+ L + EE+ PT++ + V V ++ Sbjct: 31 ARLVKILLLGAGESGKSTFLKQMRIIHGQDFDQRAREEFRPTIYSNVIKGMRVLVDARE- 89 Query: 58 LLGL 61 L + Sbjct: 90 KLHI 93 Score = 29.0 bits (64), Expect = 1.6, Method: Composition-based stats. Identities = 14/102 (13%), Positives = 35/102 (34%), Gaps = 20/102 (19%) Query: 96 FQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLND---------MKEKPVCV- 145 F+ + NV +L + DL ++ + + D + V Sbjct: 257 FETIVNN------RVFSNVSIILFLNKTDLLEEKVQVVSIKDYFLEFEGDPHCLRDVQKF 310 Query: 146 ----EQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAIL 183 +G++ ++ + +A+ + ++ VF + IL Sbjct: 311 LVECFRGKRRDQQQRPLYHHFTTAINTENIRLVFRDVKDTIL 352 >2Q3F-A nrPDB Length = 181 Score = 34.0 bits (77), Expect = 0.043, Method: Composition-based stats. Identities = 19/181 (10%), Positives = 56/181 (30%), Gaps = 14/181 (7%) Query: 11 KCVVVGDGAVGKTCLL-MSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQED 69 + +++G GK+ + + + + E + ++D GQ D Sbjct: 6 RILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNKICREDVSNSSFVNFQIWDFPGQID 65 Query: 70 YDRLR---PLSYPMTDVFLICFSVVNPASF-QNVKEEWVPELKEYAPNVPF---LLIGTQ 122 + + + T + + + + + + + + Y N + I + Sbjct: 66 FFDPTFDYEMIFRGTGALIFV--IDSQDDYMEALARLHLTVTRAYKVNTDINFEVFI-HK 122 Query: 123 IDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI 182 +D D + D+ ++ L K + S + + F + + + Sbjct: 123 VDGLSDDHKIETQRDIHQRANDDLADAGLEKIH--LSFYLTS-IYDHSIFEAFSKVVQKL 179 Query: 183 L 183 + Sbjct: 180 I 180 >5IRR-A nrPDB Length = 308 Score = 34.0 bits (77), Expect = 0.045, Method: Composition-based stats. Identities = 10/23 (43%), Positives = 14/23 (60%) Query: 8 LMLKCVVVGDGAVGKTCLLMSYA 30 +K +VVGD +GKT L+ S Sbjct: 25 KYIKLIVVGDSGLGKTTLIKSLI 47 >4DCU-A nrPDB Length = 456 Score = 34.0 bits (77), Expect = 0.046, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 68/187 (36%), Gaps = 29/187 (15%) Query: 9 MLKCVVVGDGAVGKTCLLMSYANDA--FPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAG 66 +++ ++G VGK+ L+ + + T D S T ++ + DTAG Sbjct: 195 VIQFCLIGRPNVGKSSLVNAMLGEERVIVSNVAGTTRDAVDTSFTYNQQE--FVIVDTAG 252 Query: 67 ----------QEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNV-- 114 E Y LR L + V++ + + E + YA Sbjct: 253 MRKKGKVYETTEKYSVLRALKAIDRSEVVAV--VLDGE--EGIIE-QDKRIAGYAHEAGK 307 Query: 115 PFLLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTV 174 +++ + D D ++ + + + + Q L + ++ SALT+K + T+ Sbjct: 308 AVVIVVNKWDAVDKDESTMKEFEENIR----DHFQFL--DYAPILFM--SALTKKRIHTL 359 Query: 175 FDEAIIA 181 I A Sbjct: 360 MPAIIKA 366 Score = 32.5 bits (73), Expect = 0.11, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 40/133 (30%), Gaps = 18/133 (13%) Query: 3 HGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVS---VTVGGK--QY 57 G +VG VGK+ + A + + V D V+ + + Y Sbjct: 17 RGSHMGKPVVAIVGRPNVGKSTIFNRIAGER-----ISIVEDTPGVTRDRIYSSAEWLNY 71 Query: 58 LLGLYDTAGQEDYDRLRPLSYPMT------DVFLICFSVVNPASFQNVKEEWVPELKEYA 111 L DT G + D + +I F V EE L Y Sbjct: 72 DFNLIDTGGIDIGDEPFLAQIRQQAEIAMDEADVIIFMVNGREGVTAADEEVAKIL--YR 129 Query: 112 PNVPFLLIGTQID 124 P +L ++D Sbjct: 130 TKKPVVLAVNKLD 142 >1SHZ-A nrPDB Length = 340 Score = 33.7 bits (76), Expect = 0.064, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 27/65 (41%), Gaps = 10/65 (15%) Query: 6 GALMLKCVVVGDGAVGKTCLLMSY-------ANDAFPEEYVPTVFDHYAV--SVTVGGKQ 56 A +K +++G G GK+ L + EE+ PT++ + V V ++ Sbjct: 9 AAREVKLLLLGAGESGKSTFLKQMRIIHGQDFDQRAREEFRPTIYSNVIKGMRVLVDARE 68 Query: 57 YLLGL 61 L + Sbjct: 69 -KLHI 72 Score = 33.3 bits (75), Expect = 0.075, Method: Composition-based stats. Identities = 19/162 (11%), Positives = 42/162 (25%), Gaps = 38/162 (23%) Query: 55 KQYLLGLYDTAGQEDYDRLRPLSYPMTDVFLIC-----FS---VVNPAS---------FQ 97 K ++D GQ + + + C + + + + F Sbjct: 178 KDLHFKMFDVGGQRSERKKWFECFEGVTAIIFCVALSDYDQVLMEDRQTNRMHESMKLFD 237 Query: 98 NV-KEEWVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLN---DMKEKPVCVEQGQKL-- 151 ++ +W + +L + DL ++ + L E+ Sbjct: 238 SICNNKWFT-------DTSIILFLNKKDLFEEKIKKSPLTICYPEYAGSNTYEEAAAYIQ 290 Query: 152 --------AKEIGACCYVECSALTQKGLKTVFDEAIIAILTP 185 K+ A K ++ VFD I+ Sbjct: 291 CQFEDLNKRKDTKEIYTHFTCATDTKNVQFVFDAVTDVIIKN 332 >6CES-C nrPDB Length = 399 Score = 33.7 bits (76), Expect = 0.065, Method: Composition-based stats. Identities = 21/182 (11%), Positives = 54/182 (29%), Gaps = 16/182 (8%) Query: 11 KCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGG----KQYLLGLYDTAG 66 + +++G GK + T+F + ++D G Sbjct: 63 RILLMGLRRSGKNS-IQKVVFHKMSPNE--TLFLESTNKIYKDDISNSSFVNFQIWDFPG 119 Query: 67 QEDYDRLR---PLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA--PNVPFLLIGT 121 Q D+ + + T + + + + + K Y P++ F + Sbjct: 120 QMDFFDPTFDYEMIFRGTGALIYVIDAQD-DYMEALTRLHITVSKAYKVNPDMNFEVFIH 178 Query: 122 QIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIA 181 ++D D + D+ ++ L K + S + + F + + Sbjct: 179 KVDGLSDDHKIETQRDIHQRANDDLADAGLEKLH--LSFYLTS-IYDHSIFEAFSKVVQK 235 Query: 182 IL 183 ++ Sbjct: 236 LI 237 >6G12-A nrPDB Length = 301 Score = 33.3 bits (75), Expect = 0.067, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 25/65 (38%), Gaps = 3/65 (4%) Query: 2 AHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGL 61 A G ++ ++VG VGK+ L+ A + + + VG L L Sbjct: 120 AKGLKPRAIRAMIVGIPNVGKSTLINKLAKRSIAQTGNKPGVTKQQQWIKVGNA---LQL 176 Query: 62 YDTAG 66 DT G Sbjct: 177 LDTPG 181 >2RGK-A nrPDB Length = 421 Score = 33.3 bits (75), Expect = 0.085, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 20/56 (35%), Gaps = 10/56 (17%) Query: 59 LGLYDTAGQ--EDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAP 112 L +D A E+Y + + FLI + V + ++W+ A Sbjct: 155 LESWDEAFSKTEEYRG-GNANMHAVEAFLIVYDVTH-------DKKWLDRAIRVAS 202 >5X4B-A nrPDB Length = 162 Score = 32.9 bits (74), Expect = 0.10, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 39/124 (31%), Gaps = 18/124 (14%) Query: 12 CVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVS---VTVGGK--QYLLGLYDTAG 66 +VG VGK+ + A + + V D V+ + + Y L DT G Sbjct: 5 VAIVGRPNVGKSTIFNRIAGER-----ISIVEDTPGVTRDRIYSSAEWLNYDFNLIDTGG 59 Query: 67 QEDYDRLRPLSYPMT------DVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIG 120 + D + +I F V EE L Y P +L Sbjct: 60 IDIGDEPFLAQIRQQAEIAMDEADVIIFMVNGREGVTAADEEVAKIL--YRTKKPVVLAV 117 Query: 121 TQID 124 ++D Sbjct: 118 NKLD 121 >5H7J-A nrPDB Length = 743 Score = 32.9 bits (74), Expect = 0.10, Method: Composition-based stats. Identities = 35/169 (20%), Positives = 61/169 (36%), Gaps = 39/169 (23%) Query: 53 GGKQYLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVN---PASFQNVKEEWVPELKE 109 GK YL+ L DT G D+ + D +I V P + V++ L+E Sbjct: 87 EGKDYLINLIDTPGHVDFGGDVTRAMRAIDGVIIVVDAVEGVMPQTETVVRQA----LRE 142 Query: 110 YAPNVPFLLIGTQID-------------LRDDPKTLARLNDMKEKPVCVEQGQKL--AKE 154 Y V F+ ++D + K + +N + ++ E +K E Sbjct: 143 YVKPVLFI---NKVDRLIRELKLTPQQMMERFSKIIMDVNRLIQRYAPEEYKKKWMVKVE 199 Query: 155 IGACCYVECSALTQ----------KGLKTVFDEAIIAILTPKKHTVKKR 193 G+ + SA G+K F+E I L T++++ Sbjct: 200 DGSVAF--GSAYYNWALSVPFMKRTGVK--FNEIIDLTLKGDNRTLRQK 244 >1HEY-A nrPDB Length = 128 Score = 32.9 bits (74), Expect = 0.11, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 31/99 (31%), Gaps = 10/99 (10%) Query: 6 GALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLY--- 62 LK +VVG+G GK+ + F + GG +++ + Sbjct: 1 ADKELKFLVVGNGGTGKSTVRNLLKELGFNNVEDAEDGVDALNKLQAGGYGFVISDWNMP 60 Query: 63 --DTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNV 99 D G E +R L V A +N+ Sbjct: 61 NMD--GLELLKTIRAD---GAMSALPVLMVTAEAKKENI 94 >5AR1-A nrPDB Length = 303 Score = 32.9 bits (74), Expect = 0.11, Method: Composition-based stats. Identities = 13/74 (17%), Positives = 23/74 (31%), Gaps = 13/74 (17%) Query: 6 GALMLKCVVVGDGAVGKTCLLMSYANDAFPEEY--------VPTVFDHYAVSVTV----- 52 G + ++VG G++ + + + T D TV Sbjct: 24 GGITFTVMIVGQSGSGRSTFINTLCGQQVVDTSTTILLPTDTSTEIDLQLREETVELEDD 83 Query: 53 GGKQYLLGLYDTAG 66 G + L + DT G Sbjct: 84 EGVKIQLNIIDTPG 97 >6F1T-i nrPDB Length = 492 Score = 32.5 bits (73), Expect = 0.11, Method: Composition-based stats. Identities = 12/83 (14%), Positives = 29/83 (34%), Gaps = 2/83 (2%) Query: 90 VVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQ 149 + + + +NV + + +P L++ T+ D + D + + Sbjct: 201 LTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSH-LR 259 Query: 150 KLAKEIGACCYVECSALTQKGLK 172 + + GA + S +K L Sbjct: 260 RFCLQYGAAL-IYTSVKEEKNLD 281 >3K53-A nrPDB Length = 271 Score = 32.5 bits (73), Expect = 0.12, Method: Composition-based stats. Identities = 22/169 (13%), Positives = 50/169 (29%), Gaps = 24/169 (14%) Query: 12 CVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYD 71 +VG+ VGKT + + P V + ++ + D G Sbjct: 6 VALVGNPNVGKTTIFNALTGLRQHVGNWPGVTVEKKEGIMEYREK-EFLVVDLPGIYSLT 64 Query: 72 R------LRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDL 125 + + +I +V+ + + N+ +L + DL Sbjct: 65 AHSIDELIARNFILDGNADVIV-DIVDSTCLMRNLFLTLELFEMEVKNIILVL--NKFDL 121 Query: 126 RDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTV 174 + +K+ KE+G + +A +G++ + Sbjct: 122 LKKKGAKIDI-------------KKMRKELG-VPVIPTNAKKGEGVEEL 156 >1NI3-A nrPDB Length = 392 Score = 32.5 bits (73), Expect = 0.12, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 31/85 (36%), Gaps = 17/85 (20%) Query: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFD--HYAVSVTVGGKQYLLGLYDTAGQ 67 LK +VG VGK+ F + + +Y T+ ++ + + D Sbjct: 21 LKTGIVGMPNVGKSTF--------FRAITKSVLGNPANYP-YATIDPEEAKVAVPD---- 67 Query: 68 EDYDRLRPLSYPMTD--VFLICFSV 90 E +D L P + FL F + Sbjct: 68 ERFDWLCEAYKPKSRVPAFLTVFDI 92 >4WQY-BZ nrPDB Length = 758 Score = 32.5 bits (73), Expect = 0.12, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 28/74 (37%), Gaps = 12/74 (16%) Query: 55 KQYLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEE----WVPELKEY 110 K + + + DT G D+ S + D ++ F S Q V+ + W K Sbjct: 142 KDHRINIIDTPGHVDFTIEVERSMRVLDGAIVVFD-----SSQGVEPQSETVWRQAEKYK 196 Query: 111 APNVPFLLIGTQID 124 P + F ++D Sbjct: 197 VPRIAF---ANKMD 207 >6HZK-A nrPDB Length = 333 Score = 32.5 bits (73), Expect = 0.12, Method: Composition-based stats. Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 4/35 (11%) Query: 11 KCVVVG---DGAVGKTCLLMSYANDAFPEEYVPTV 42 + V++G D GK+ L A D F E + + Sbjct: 6 RVVLIGVAGDSGCGKSTFLNRLA-DLFGTELMTVI 39 >3H2Y-A nrPDB Length = 368 Score = 32.5 bits (73), Expect = 0.12, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 13/24 (54%) Query: 102 EWVPELKEYAPNVPFLLIGTQIDL 125 W+P L + N LL+G + DL Sbjct: 85 SWLPGLHRFVGNNKVLLVGNKADL 108 Score = 30.2 bits (67), Expect = 0.66, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 21/59 (35%), Gaps = 5/59 (8%) Query: 12 CVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLG----LYDTAG 66 VVG VGK+ + F +E + + T+ L LYDT G Sbjct: 163 VYVVGCTNVGKSTFINRMIK-EFSDETENVITTSHFPGTTLDLIDIPLDEESSLYDTPG 220 >6F1Y-j nrPDB Length = 337 Score = 32.5 bits (73), Expect = 0.13, Method: Composition-based stats. Identities = 12/90 (13%), Positives = 32/90 (35%), Gaps = 2/90 (2%) Query: 90 VVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQ 149 + + + +NV + + +P L++ T+ D + D + + Sbjct: 165 LTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSH-LR 223 Query: 150 KLAKEIGACCYVECSALTQKGLKTVFDEAI 179 + + GA + S +K L ++ + Sbjct: 224 RFCLQYGAAL-IYTSVKEEKNLDLLYKYIV 252 >5H7K-A nrPDB Length = 397 Score = 32.1 bits (72), Expect = 0.15, Method: Composition-based stats. Identities = 35/169 (20%), Positives = 61/169 (36%), Gaps = 39/169 (23%) Query: 53 GGKQYLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVN---PASFQNVKEEWVPELKE 109 GK YL+ L DT G D+ + D +I V P + V++ L+E Sbjct: 87 EGKDYLINLIDTPGHVDFGGDVTRAMRAIDGVIIVVDAVEGVMPQTETVVRQA----LRE 142 Query: 110 YAPNVPFLLIGTQID-------------LRDDPKTLARLNDMKEKPVCVEQGQKL--AKE 154 Y V F+ ++D + K + +N + ++ E +K E Sbjct: 143 YVKPVLFI---NKVDRLIRELKLTPQQMMERFSKIIMDVNRLIQRYAPEEYKKKWMVKVE 199 Query: 155 IGACCYVECSALTQ----------KGLKTVFDEAIIAILTPKKHTVKKR 193 G+ + SA G+K F+E I L T++++ Sbjct: 200 DGSVAF--GSAYYNWALSVPFMKRTGVK--FNEIIDLTLKGDNRTLRQK 244 >2ZBL-A nrPDB Length = 421 Score = 32.1 bits (72), Expect = 0.16, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 20/56 (35%), Gaps = 10/56 (17%) Query: 59 LGLYDTAGQ--EDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAP 112 L +D A EDY + + FLI + V + ++W+ A Sbjct: 155 LESWDEAFSQTEDYRG-GNANMHAVEAFLIVYDVTH-------DKKWLDRALRIAS 202 >6D9H-A nrPDB Length = 355 Score = 32.1 bits (72), Expect = 0.17, Method: Composition-based stats. Identities = 25/192 (13%), Positives = 52/192 (27%), Gaps = 50/192 (26%) Query: 35 PEEYVPTVFDHYAVSVTVGG--------KQYLLGLYDTAGQ--EDYDRLRPLSYPMTDVF 84 +Y+PT D V G K ++D Q E + + Sbjct: 165 QSDYIPTQQDVLRTRVKTTGIVETHFTFKDLHFKMFDVGAQRSERKKWI--HCFEGVTAI 222 Query: 85 LIC-----FSVV------------NPASFQNV-KEEWVPELKEYAPNVPFLLIGTQIDLR 126 + C + +V + F ++ +W + +L + DL Sbjct: 223 IFCVALSAYDLVLAEDEEMNRMHASMKLFDSICNNKWFT-------DTSIILFLNKKDLF 275 Query: 127 DDPKTLARL-------------NDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKT 173 ++ T + L ++ + K+ + K ++ Sbjct: 276 EEKITHSPLTICFPEYTGANKYDEAASYIQSKFEDLNKRKDTKEIYTHFTCSTDTKNVQF 335 Query: 174 VFDEAIIAILTP 185 VFD I+ Sbjct: 336 VFDAVTDVIIKN 347 >2WJG-A nrPDB Length = 188 Score = 32.1 bits (72), Expect = 0.17, Method: Composition-based stats. Identities = 6/56 (10%), Positives = 20/56 (35%), Gaps = 1/56 (1%) Query: 4 GPGALMLKCVVVGDGAVGKTCLLMSYA-NDAFPEEYVPTVFDHYAVSVTVGGKQYL 58 G + ++G+ VGK+ + + + + + + G+++ Sbjct: 2 GSHMKSYEIALIGNPNVGKSTIFNALTGENVYIGNWPGVTVEKKEGEFEYNGEKFK 57 >1TAG-A nrPDB Length = 324 Score = 31.7 bits (71), Expect = 0.22, Method: Composition-based stats. Identities = 30/193 (15%), Positives = 49/193 (25%), Gaps = 56/193 (29%) Query: 36 EEYVPTVFDHYAVSVTVGG--------KQYLLGLYDTAGQ--EDYDRLRPLSYPMTDVFL 85 YVPT D V G K ++D GQ E + + + Sbjct: 135 PGYVPTEQDVLRSRVKTTGIIETQFSFKDLNFRMFDVGGQRSERKKWI--HCFEGVTCII 192 Query: 86 IC-----FS---VVN------PAS---FQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDD 128 + V + S F ++ Y +L + D+ + Sbjct: 193 FIAALSAYDMVLVEDDEVNRMHESLHLFNSICNH------RYFATTSIVLFLNKKDVFSE 246 Query: 129 PKTLARLN---DMKEKPVCVEQGQKLAKEIGACCYVE--------------CSALTQKGL 171 A L+ P E A ++E A + + Sbjct: 247 KIKKAHLSICFPDYNGPNTYED----AGNYIKVQFLELNMRRDVKEIYSHMTCATDTQNV 302 Query: 172 KTVFDEAIIAILT 184 K VFD I+ Sbjct: 303 KFVFDAVTDIIIK 315 Score = 27.9 bits (61), Expect = 3.1, Method: Composition-based stats. Identities = 6/22 (27%), Positives = 13/22 (59%) Query: 7 ALMLKCVVVGDGAVGKTCLLMS 28 A +K +++G G GK+ ++ Sbjct: 1 ARTVKLLLLGAGESGKSTIVKQ 22 >2P8Y-T nrPDB Length = 842 Score = 31.7 bits (71), Expect = 0.24, Method: Composition-based stats. Identities = 17/106 (16%), Positives = 38/106 (35%), Gaps = 12/106 (11%) Query: 43 FDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNP---ASFQNV 99 D + G +L+ L D+ G D+ + +TD L+ + + + Sbjct: 84 EDVKEIKQKTDGNSFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDTIEGVCVQTETVL 143 Query: 100 KEEWVPELKEYAPNVPFLLIGTQID--LRDDPKTLARLNDMKEKPV 143 ++ +K P ++I ++D L + + L + V Sbjct: 144 RQALGERIK------PVVVI-NKVDRALLELQVSKEDLYQTFARTV 182 >2GZA-A nrPDB Length = 361 Score = 31.3 bits (70), Expect = 0.27, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 20/48 (41%) Query: 12 CVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLL 59 VV G+ GKT L+ + + ++ + T+ D + + L Sbjct: 178 IVVAGETGSGKTTLMKALMQEIPFDQRLITIEDVPELFLPDHPNHVHL 225 >1ZCA-A nrPDB Length = 359 Score = 31.3 bits (70), Expect = 0.28, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 10/63 (15%) Query: 8 LMLKCVVVGDGAVGKTCLL--MSYAND-AFPE----EYVPTVFDHYAV--SVTVGGKQYL 58 ++K +++G G GK+ L M + F + E+ T+FD+ V V + Sbjct: 34 RLVKILLLGAGESGKSTFLKQMRIIHGREFDQKALLEFRDTIFDNILKGSRVLVDARD-K 92 Query: 59 LGL 61 LG+ Sbjct: 93 LGI 95 Score = 26.7 bits (58), Expect = 7.6, Method: Composition-based stats. Identities = 22/160 (13%), Positives = 43/160 (26%), Gaps = 36/160 (22%) Query: 55 KQYLLGLYDTAGQEDYDRLRPLSYPMTDVFLIC-----FS------------VVNPASFQ 97 K+ + D GQ + + L + V + F+ Sbjct: 197 KKIPFKMVDVGGQRSQRQKWFQCFDGITSILFMVSSSEYDQVLMEDRRTNRLVESMNIFE 256 Query: 98 NVKEEWVPELKEYAPNVPFLLIGTQIDLRDDP----KTLARLNDMKEKPVCVEQGQKL-- 151 + + NV +L ++DL + D K P +E Q+ Sbjct: 257 TIVNN------KLFFNVSIILFLNKMDLLVEKVKSVSIKKHFPDFKGDPHRLEDVQRYLV 310 Query: 152 -------AKEIGACCYVECSALTQKGLKTVFDEAIIAILT 184 + +A+ + ++ VF IL Sbjct: 311 QCFDRKRRNRSKPLFHHFTTAIDTENIRFVFHAVKDTILQ 350 >1YE8-A nrPDB Length = 178 Score = 31.3 bits (70), Expect = 0.28, Method: Composition-based stats. Identities = 7/22 (31%), Positives = 12/22 (54%) Query: 10 LKCVVVGDGAVGKTCLLMSYAN 31 +K ++ G+ VGKT L+ Sbjct: 1 MKIIITGEPGVGKTTLVKKIVE 22 >4YMS-J nrPDB Length = 240 Score = 31.3 bits (70), Expect = 0.29, Method: Composition-based stats. Identities = 9/49 (18%), Positives = 17/49 (34%), Gaps = 5/49 (10%) Query: 12 CVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLG 60 V++G GK+ LL PT + + V + + + Sbjct: 30 VVIIGPSGSGKSTLLR-----CINLLEEPTKGEVFIDGVKINNGKVNIN 73 >3FVQ-A nrPDB Length = 359 Score = 31.3 bits (70), Expect = 0.32, Method: Composition-based stats. Identities = 9/31 (29%), Positives = 15/31 (48%), Gaps = 3/31 (9%) Query: 1 MAHGPGALMLKCVVVGDGAVGKTCLLMSYAN 31 ++ PG ++ ++G GKT LL A Sbjct: 25 LSLDPGEILF---IIGASGCGKTTLLRCLAG 52 >6N0I-A nrPDB Length = 706 Score = 31.3 bits (70), Expect = 0.32, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 30/73 (41%), Gaps = 10/73 (13%) Query: 55 KQYLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVN---PASFQNVKEEWVPELKEYA 111 +Y + DT G D+ S + D ++ FS + P S + V W K + Sbjct: 84 HKYRFNIIDTPGHVDFTIEVERSLRVLDGAVVVFSGADGVEPQS-ETV---WRQANKYHV 139 Query: 112 PNVPFLLIGTQID 124 P + ++ ++D Sbjct: 140 PRLAYI---NKMD 149 >5B3F-A nrPDB Length = 343 Score = 31.0 bits (69), Expect = 0.37, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%) Query: 7 ALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHY 46 L+ V GD GK+ +D F EE V ++ D Y Sbjct: 35 PLVYLIGVAGDSGSGKSTFT-RAISDIFGEELVSSITVDDY 74 >4QJ3-A nrPDB Length = 379 Score = 31.0 bits (69), Expect = 0.40, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 57/182 (31%), Gaps = 32/182 (17%) Query: 35 PEEYVPTVFDHYAVSVTVGG--------KQYLLGLYDTAGQ--EDYDRLRPLSYPMTDVF 84 Y+PT D V V G + + + D GQ E + + +F Sbjct: 189 DPSYLPTQQDVLRVRVPTTGIIEYPFDLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMF 248 Query: 85 LICFSVVNPASFQNVKEEWVPELKEYAPNVP---------FLLIGTQIDLRDDPKTLARL 135 L+ S + ++ E + E K + +L + DL ++ + L Sbjct: 249 LVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMYSHL 308 Query: 136 NDMKEKPVCVEQGQKLAKEIGACCYV-------------ECSALTQKGLKTVFDEAIIAI 182 D + ++ + A+E +V A + ++ VF I Sbjct: 309 VDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTI 368 Query: 183 LT 184 L Sbjct: 369 LQ 370 Score = 27.1 bits (59), Expect = 4.9, Method: Composition-based stats. Identities = 6/21 (28%), Positives = 11/21 (52%) Query: 8 LMLKCVVVGDGAVGKTCLLMS 28 LK +++G G GK+ + Sbjct: 58 RELKLLLLGTGESGKSTFIKQ 78 >5EE0-A nrPDB Length = 395 Score = 31.0 bits (69), Expect = 0.41, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 30/80 (37%), Gaps = 12/80 (15%) Query: 4 GPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYD 63 G + LK +VG VGK+ + P E P T+ + + + D Sbjct: 20 GRFSSHLKIGIVGLPNVGKSTFFNIVTKLSIPAENFP--------FCTIDPNEARVYVPD 71 Query: 64 TAGQEDYDRLRPLSYPMTDV 83 E +D L L P ++V Sbjct: 72 ----ERFDWLCQLYKPKSEV 87 >2BCJ-Q nrPDB Length = 353 Score = 31.0 bits (69), Expect = 0.42, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 57/182 (31%), Gaps = 32/182 (17%) Query: 35 PEEYVPTVFDHYAVSVTVGG--------KQYLLGLYDTAGQ--EDYDRLRPLSYPMTDVF 84 Y+PT D V V G + + + D GQ E + + +F Sbjct: 163 DPSYLPTQQDVLRVRVPTTGIIEYPFDLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMF 222 Query: 85 LICFSVVNPASFQNVKEEWVPELKEYAPNVP---------FLLIGTQIDLRDDPKTLARL 135 L+ S + ++ E + E K + +L + DL ++ + L Sbjct: 223 LVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMYSHL 282 Query: 136 NDMKEKPVCVEQGQKLAKEIGACCYV-------------ECSALTQKGLKTVFDEAIIAI 182 D + ++ + A+E +V A + ++ VF I Sbjct: 283 VDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTI 342 Query: 183 LT 184 L Sbjct: 343 LQ 344 Score = 27.1 bits (59), Expect = 5.0, Method: Composition-based stats. Identities = 6/21 (28%), Positives = 11/21 (52%) Query: 8 LMLKCVVVGDGAVGKTCLLMS 28 LK +++G G GK+ + Sbjct: 32 RELKLLLLGTGESGKSTFIKQ 52 >4Z54-A nrPDB Length = 287 Score = 30.6 bits (68), Expect = 0.44, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 24/67 (35%), Gaps = 10/67 (14%) Query: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVP-TVFDHYAVSVTV---------GGKQYLL 59 +VVG +GK+ L+ + + + +V + GG + L Sbjct: 20 FNIMVVGQSGLGKSTLVNTLFKSQVSRKASSWNREEKIPKTVEIKAIGHVIEEGGVKMKL 79 Query: 60 GLYDTAG 66 + DT G Sbjct: 80 TVIDTPG 86 >4OO1-B nrPDB Length = 250 Score = 30.6 bits (68), Expect = 0.46, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 47/145 (32%), Gaps = 21/145 (14%) Query: 23 TCLLMSYANDAFPEEYVPTVFDHYAVSVTVGG-------KQYLLGLYDTAGQEDYDRLRP 75 T L+ + + Y TV D + G L L D AG +D Sbjct: 106 TSLVRMFEKNVMLNIYPRTVIDIEIHVLEQDGGIMGSLINGITLALID-AGISMFD---- 160 Query: 76 LSYPMTDVFLICFSVV---NPASF-QNVKEEWVPELKEYAPNVPFLLIGTQI--DLRDDP 129 V L + + S +N + + + LL+ +I D ++ Sbjct: 161 -YISGISVGL--YDTTPLLDTNSLEENAMSTVTLGVVGKSEKLSLLLVEDKIPLDRLENV 217 Query: 130 KTLARLNDMKEKPVCVEQGQKLAKE 154 + + + + E+ +K A++ Sbjct: 218 LAIGIAGAHRVRDLMDEELRKHAQK 242 >5LKM-A nrPDB Length = 452 Score = 30.6 bits (68), Expect = 0.49, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 55/161 (34%), Gaps = 41/161 (25%) Query: 5 PGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDT 64 PG+L ++ GD +GK+ LL+ + V TV + V G++ + Sbjct: 87 PGSL---VLIGGDPGIGKSTLLLQVST---QLSQVGTV-------LYVSGEESAQQIKLR 133 Query: 65 AGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQID 124 A E + Y ++ N S + E++ P+ + D Sbjct: 134 A--ERLGDIDSEFY--------LYAETNMQSVRA-------EVERIQPDFLII------D 170 Query: 125 ----LRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYV 161 + + + + + + V E Q LAK ++ Sbjct: 171 SIQTIMSPEISGVQGSVSQVREVTAELMQ-LAKTNNIAIFI 210 >3A1W-A nrPDB Length = 168 Score = 30.6 bits (68), Expect = 0.49, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 61/181 (33%), Gaps = 31/181 (17%) Query: 9 MLKCVVVGDGAVGKTCLLMSYA-NDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQ 67 M+K + G VGKT L + + + + T G Y + L D G Sbjct: 5 MVKVALAGCPNVGKTSLFNALTGTKQYVANWPGVTVEKKEGVFTYKG--YTINLIDLPGT 62 Query: 68 ED--YDRLRPLSYP------MTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLI 119 Y + D+ ++ VNP + E+ E V + Sbjct: 63 YSLGYSSIDEKIARDYLLKGDADLVILVADSVNPEQ----SLYLLLEILEMEKKVILAM- 117 Query: 120 GTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAI 179 + + KT +++ +L K +G V S++T +GL+ + ++ + Sbjct: 118 ---TAIDEAKKTGMKIDRY-----------ELQKHLG-IPVVFTSSVTGEGLEELKEKIV 162 Query: 180 I 180 Sbjct: 163 E 163 >4HZI-A nrPDB Length = 294 Score = 30.6 bits (68), Expect = 0.50, Method: Composition-based stats. Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 4/59 (6%) Query: 12 CVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAV--SVTVGGKQYLLGLYDTAGQE 68 CV++G GK+ L+ T+ + + + +G+ D++ QE Sbjct: 63 CVLLGRNGAGKSTLVN-LIYG-MIWATSGTIRLFQETYGEIAIQDLRKRIGILDSSQQE 119 >2XTZ-A nrPDB Length = 354 Score = 30.6 bits (68), Expect = 0.51, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 24/58 (41%), Gaps = 7/58 (12%) Query: 2 AHGPGALMLKCVVVGDGAVGKTCLLMS---YANDAFPE----EYVPTVFDHYAVSVTV 52 A G G + K +++G G GK+ + F E YVP + + ++ + Sbjct: 2 AMGSGIHIRKLLLLGAGESGKSTIFKQIKLLFQTGFDEGELKSYVPVIHANVYQTIKL 59 >5C78-A nrPDB Length = 564 Score = 30.6 bits (68), Expect = 0.53, Method: Composition-based stats. Identities = 5/16 (31%), Positives = 9/16 (56%) Query: 11 KCVVVGDGAVGKTCLL 26 K +G+ GK+ L+ Sbjct: 377 KIAFIGESGCGKSTLV 392 >5M04-A nrPDB Length = 360 Score = 30.6 bits (68), Expect = 0.54, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 17/75 (22%) Query: 104 VPELKEYAPNV---PFLLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGAC-C 159 + EL++Y+ ++ P L+ +IDL D + E+ + +A+ +G Sbjct: 283 ISELEKYSQDLATKPRWLVFNKIDLLDKVEA-------------EEKAKAIAEALGWEDK 329 Query: 160 YVECSALTQKGLKTV 174 Y SA + G+K + Sbjct: 330 YYLISAASGLGVKDL 344 >5OCH-A nrPDB Length = 612 Score = 30.6 bits (68), Expect = 0.54, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 21/78 (26%), Gaps = 30/78 (38%) Query: 12 CVVVGDGAVGKT---CLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQE 68 +VG GKT LL + Y PT V + G+ Sbjct: 394 VALVGQSGGGKTTVASLLERF--------YDPTAGV-----VMLDGR------------- 427 Query: 69 DYDRLRPLSYPM-TDVFL 85 D L P F+ Sbjct: 428 DLRTLDPSWLRGQVVGFI 445 >4CSU-9 nrPDB Length = 390 Score = 30.2 bits (67), Expect = 0.71, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 17/75 (22%) Query: 104 VPELKEYAPNV---PFLLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGAC-C 159 + EL++Y+ ++ P L+ +IDL D + E+ + +A+ +G Sbjct: 263 ISELEKYSQDLATKPRWLVFNKIDLLDKVEA-------------EEKAKAIAEALGWEDK 309 Query: 160 YVECSALTQKGLKTV 174 Y SA + G+K + Sbjct: 310 YYLISAASGLGVKDL 324 >4TLD-A nrPDB Length = 253 Score = 30.2 bits (67), Expect = 0.72, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 20/49 (40%) Query: 1 MAHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVS 49 ++HG + +V G GKT + + + E P VF + + Sbjct: 31 ISHGGLPIGRSTLVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEET 79 >5TV2-A nrPDB Length = 405 Score = 29.8 bits (66), Expect = 0.75, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 40/99 (40%), Gaps = 11/99 (11%) Query: 46 YAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPMTDVFLICF---SVVNPASFQNVKEE 102 + + + + + + DT G D+ S + D ++ F S V P S + V Sbjct: 71 FWRGMEAQFQDHRVNIIDTPGHVDFTIEVERSLRVLDGAVVVFCGSSGVEPQS-ETV--- 126 Query: 103 WVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLNDMKEK 141 W K + P + F+ ++D R L ++ +K + Sbjct: 127 WRQADKYHVPRMVFV---NKMD-RAGADFLRVVDQIKNR 161 >2YV5-A nrPDB Length = 302 Score = 29.8 bits (66), Expect = 0.75, Method: Composition-based stats. Identities = 7/29 (24%), Positives = 13/29 (44%) Query: 12 CVVVGDGAVGKTCLLMSYANDAFPEEYVP 40 C++ G VGK+ +L + + V Sbjct: 168 CILAGPSGVGKSSILSRLTGEELRTQEVS 196 >4MRS-A nrPDB Length = 614 Score = 29.8 bits (66), Expect = 0.76, Method: Composition-based stats. Identities = 9/50 (18%), Positives = 17/50 (34%), Gaps = 16/50 (32%) Query: 11 KCVVVGDGAVGKTC---LLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQY 57 + +VG GK+ LL + Y P + + + G+ Sbjct: 389 RVAIVGPSGAGKSTIARLLFRF--------YDP-----WEGRILIDGQDI 425 >1ZE1-A nrPDB Length = 309 Score = 29.8 bits (66), Expect = 0.76, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 26/64 (40%), Gaps = 3/64 (4%) Query: 102 EWVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQ--KLAKEIGACC 159 EW+P + + + +L G+QI L + + E+G+ LA+ Sbjct: 227 EWLPRVVVHQESTKMILNGSQIHLEMLKEWDGFKKGEVVRVFN-EEGRLLALAEAERNSS 285 Query: 160 YVEC 163 ++E Sbjct: 286 FLET 289 >3A1U-A nrPDB Length = 258 Score = 29.8 bits (66), Expect = 0.80, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 61/181 (33%), Gaps = 31/181 (17%) Query: 9 MLKCVVVGDGAVGKTCLLMSYA-NDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQ 67 M+K + G VGKT L + + + + T G Y + L D G Sbjct: 5 MVKVALAGCPNVGKTSLFNALTGTKQYVANWPGVTVEKKEGVFTYKG--YTINLIDLPGT 62 Query: 68 ED--YDRLRPLSYP------MTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLI 119 Y + D+ ++ VNP + E+ E V + Sbjct: 63 YSLGYSSIDEKIARDYLLKGDADLVILVADSVNPEQ----SLYLLLEILEMEKKVILAM- 117 Query: 120 GTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAI 179 + + KT +++ +L K +G V S++T +GL+ + ++ + Sbjct: 118 ---TAIDEAKKTGMKIDRY-----------ELQKHLG-IPVVFTSSVTGEGLEELKEKIV 162 Query: 180 I 180 Sbjct: 163 E 163 >3S1A-A nrPDB Length = 525 Score = 29.8 bits (66), Expect = 0.82, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 20/49 (40%) Query: 1 MAHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVS 49 ++HG + +V G GKT + + + E P VF + + Sbjct: 31 ISHGGLPIGRSTLVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEET 79 Score = 27.1 bits (59), Expect = 6.1, Method: Composition-based stats. Identities = 5/21 (23%), Positives = 9/21 (42%) Query: 12 CVVVGDGAVGKTCLLMSYAND 32 + G GKT L+ + + Sbjct: 284 ILATGATGTGKTLLVSRFVEN 304 >2OUK-A nrPDB Length = 263 Score = 29.8 bits (66), Expect = 0.83, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 54/165 (32%), Gaps = 21/165 (12%) Query: 12 CVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYD 71 VV+G GK+ L + D + + G L DT Sbjct: 53 VVVIGPSGSGKSTFLRCL----------NLLEDFDEGEIIIDG--INLKAKDT-NLNKVR 99 Query: 72 RLRPLSYPMTDVFLICFSVVNPASFQNVK-EEWVPELKEYAPNVPFLLIGTQIDLRDDPK 130 + + ++F +V+N + +K +W E K A + L ++ L+D Sbjct: 100 EEVGMVFQRFNLFPHM-TVLNNITLAPMKVRKWPRE-KAEAKAMELL---DKVGLKDKAH 154 Query: 131 TLARLNDMKEKPVCVEQGQKLAKEIGACCYVE-CSALTQKGLKTV 174 + V + LA E + E SAL + + V Sbjct: 155 AYPDSLSGGQAQ-RVAIARALAMEPKIMLFDEPTSALDPEMVGEV 198 >2YYZ-A nrPDB Length = 359 Score = 29.8 bits (66), Expect = 0.93, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 16/43 (37%), Gaps = 5/43 (11%) Query: 12 CVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGG 54 ++G GKT L+ A Y PT + Y V V Sbjct: 32 VALLGPSGCGKTTTLLMLAG-----IYKPTSGEIYFDDVLVND 69 >5MRE-WW nrPDB Length = 401 Score = 29.4 bits (65), Expect = 1.00, Method: Composition-based stats. Identities = 8/18 (44%), Positives = 11/18 (61%) Query: 11 KCVVVGDGAVGKTCLLMS 28 K ++ G+ VGKT LL Sbjct: 96 KFIITGEPGVGKTVLLSQ 113 >1IQP-A nrPDB Length = 327 Score = 29.4 bits (65), Expect = 1.00, Method: Composition-based stats. Identities = 24/166 (14%), Positives = 55/166 (33%), Gaps = 30/166 (18%) Query: 12 CVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFD---HYAVSVTVGGKQYLLGLYDTAGQE 68 + G VGKT ++ A + F E + + + V ++ Sbjct: 49 LLFAGPPGVGKTTAALALARELFGENWRHNFLELNASDERGINVIREKVK---------- 98 Query: 69 DYDRLRPLSYPMTDVFLICF-SVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQ----- 122 ++ R +P F I F + + Q+ ++ ++ ++ NV F+L Sbjct: 99 EFARTKP---IGGASFKIIFLDEADALT-QDAQQALRRTMEMFSSNVRFILSCNYSSKII 154 Query: 123 ------IDLRDDPKTLARLNDMKEKPVCVEQGQKLAKE-IGACCYV 161 + + + + +G +L +E + A Y+ Sbjct: 155 EPIQSRCAIFRFRPLRDEDIAKRLRYIAENEGLELTEEGLQAILYI 200 >6ID0-C nrPDB Length = 972 Score = 29.4 bits (65), Expect = 1.0, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 39/126 (30%), Gaps = 27/126 (21%) Query: 21 GKTCLL------------------MSYANDAFPEEYVPTVFDHYAVSVTV---GGKQYLL 59 GKTC + + Y + F E+ V+V + GK YL Sbjct: 141 GKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVGIKSTPVTVVLPDTKGKSYLF 200 Query: 60 GLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKE-YAPNVPFLL 118 + DT G ++ ++D ++ + V +K + + Sbjct: 201 NIMDTPGHVNFSDEVTAGLRISDGVVLFIDAA-----EGVMLNTERLIKHAVQERLAVTV 255 Query: 119 IGTQID 124 +ID Sbjct: 256 CINKID 261 >6OIJ-A nrPDB Length = 353 Score = 29.4 bits (65), Expect = 1.0, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 57/179 (31%), Gaps = 32/179 (17%) Query: 38 YVPTVFDHYAVSVTVGG--------KQYLLGLYDTAGQ--EDYDRLRPLSYPMTDVFLIC 87 Y+PT D V V G + + + D GQ E + + +FL+ Sbjct: 166 YLPTQQDVLRVRVPTTGIIEYPFDLENIIFRMVDVGGQRSERRKWIHCFENVTSIMFLVA 225 Query: 88 FSVVNPASFQNVKEEWVPELKEYAPNVP---------FLLIGTQIDLRDDPKTLARLNDM 138 S + ++ E + E K + +L + DL +D + L D Sbjct: 226 LSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEDKILYSHLVDY 285 Query: 139 KEKPVCVEQGQKLAKEIGACCYV-------------ECSALTQKGLKTVFDEAIIAILT 184 + ++ + A+E +V A + ++ VF IL Sbjct: 286 FPEFDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQ 344 Score = 27.1 bits (59), Expect = 5.6, Method: Composition-based stats. Identities = 6/21 (28%), Positives = 11/21 (52%) Query: 8 LMLKCVVVGDGAVGKTCLLMS 28 LK +++G G GK+ + Sbjct: 32 RELKLLLLGTGESGKSTFIKQ 52 >1IY1-A nrPDB Length = 254 Score = 29.4 bits (65), Expect = 1.0, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 2/64 (3%) Query: 3 HGPGALMLK-CVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGL 61 H GA + K ++VG VGKT L + A +A + D + V VG + L Sbjct: 42 HEMGARIPKGVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEMFVGVGAARVR-DL 100 Query: 62 YDTA 65 ++TA Sbjct: 101 FETA 104 >3D0O-A nrPDB Length = 317 Score = 29.4 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 23/53 (43%), Gaps = 10/53 (18%) Query: 11 KCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYD 63 K V++G+GAVG + S N + + D + + + ++ + D Sbjct: 8 KVVLIGNGAVG-SSYAFSLVNQS--------IVDELVI-IDLDTEKVRGDVMD 50 >2PJZ-A nrPDB Length = 263 Score = 29.4 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 25/65 (38%), Gaps = 17/65 (26%) Query: 11 KCVVVGDGAVGKTCLLMS------YANDAFPE-----------EYVPTVFDHYAVSVTVG 53 K +++G GKT LL + Y+ + F Y + + Y + VTV Sbjct: 32 KVIILGPNGSGKTTLLRAISGLLPYSGNIFINGMEVRKIRNYIRYSTNLPEAYEIGVTVN 91 Query: 54 GKQYL 58 YL Sbjct: 92 DIVYL 96 >2DHR-A nrPDB Length = 499 Score = 29.4 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 2/64 (3%) Query: 3 HGPGALMLK-CVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGL 61 H GA + K ++VG VGKT L + A +A + D + V VG + L Sbjct: 57 HEMGARIPKGVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEMFVGVGAARVR-DL 115 Query: 62 YDTA 65 ++TA Sbjct: 116 FETA 119 >4RY2-A nrPDB Length = 730 Score = 29.4 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 15/47 (31%), Gaps = 10/47 (21%) Query: 12 CVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYL 58 +VG+ GKT L N Y P D + + G Sbjct: 518 VAIVGESGSGKTTLAKLLMN-----FYSPEKGD-----ILINGHSIK 554 >5TY0-A nrPDB Length = 422 Score = 29.4 bits (65), Expect = 1.2, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 36/91 (39%), Gaps = 13/91 (14%) Query: 55 KQYLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEE----WVPELKEY 110 + + + + DT G D+ S + D ++ F S V+ + W K Sbjct: 81 ESHRINIIDTPGHVDFMIEVERSLRVLDGAVVVFD-----SVAGVEPQSETVWRQANKYG 135 Query: 111 APNVPFLLIGTQIDLRDDPKTLARLNDMKEK 141 P + F+ ++D R L ++ +K++ Sbjct: 136 VPRIVFV---NKMD-RMGANFLRVVSQIKQR 162 >4MYH-A nrPDB Length = 598 Score = 29.4 bits (65), Expect = 1.2, Method: Composition-based stats. Identities = 9/51 (17%), Positives = 16/51 (31%), Gaps = 16/51 (31%) Query: 11 KCVVVGDGAVGKTC---LLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYL 58 K +VG GK+ L+ + Y P + + G+ Sbjct: 367 KTAIVGSSGSGKSTILKLVFRF--------YDPESG-----RILINGRDIK 404 >3LLM-A nrPDB Length = 235 Score = 29.0 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 6/26 (23%), Positives = 11/26 (42%) Query: 12 CVVVGDGAVGKTCLLMSYANDAFPEE 37 ++ G GKT + + D F + Sbjct: 79 VIIRGATGCGKTTQVPQFILDDFIQN 104 >1YR7-A nrPDB Length = 262 Score = 29.0 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 14/37 (37%), Gaps = 3/37 (8%) Query: 6 GALMLKCVVVGDGAVGKTCLL---MSYANDAFPEEYV 39 G + V VG GKT L Y D + YV Sbjct: 11 GMASMIVVFVGTAGSGKTTLTGEFGRYLEDNYKVAYV 47 >5VHD-D nrPDB Length = 870 Score = 29.0 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 7/24 (29%), Positives = 12/24 (50%) Query: 13 VVVGDGAVGKTCLLMSYANDAFPE 36 V+ G+ GKT + + D + E Sbjct: 80 VISGETGCGKTTQVTQFILDNYIE 103 >1H65-A nrPDB Length = 270 Score = 29.0 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 30/77 (38%), Gaps = 4/77 (5%) Query: 12 CVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQ--YLLGLYDTAGQED 69 +V+G G VGK+ + S + + V V + + L + DT G + Sbjct: 42 ILVMGKGGVGKSSTVNSIIGERVVS--ISPFQSEGPRPVMVSRSRAGFTLNIIDTPGLIE 99 Query: 70 YDRLRPLSYPMTDVFLI 86 + ++ + FL+ Sbjct: 100 GGYINDMALNIIKSFLL 116 >2NQL-A nrPDB Length = 388 Score = 29.0 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 8/18 (44%), Positives = 11/18 (61%) Query: 59 LGLYDTAGQEDYDRLRPL 76 + L+D AGQE +R L Sbjct: 128 IALWDIAGQEAGKSIRDL 145 >3GD7-A nrPDB Length = 390 Score = 29.0 bits (64), Expect = 1.4, Method: Composition-based stats. Identities = 5/21 (23%), Positives = 11/21 (52%) Query: 11 KCVVVGDGAVGKTCLLMSYAN 31 + ++G GK+ LL ++ Sbjct: 49 RVGLLGRTGSGKSTLLSAFLR 69 >5I8Q-A nrPDB Length = 767 Score = 29.0 bits (64), Expect = 1.4, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 13/40 (32%), Gaps = 1/40 (2%) Query: 12 CVVVGDGAVGKTCLLMSYA-NDAFPEEYVPTVFDHYAVSV 50 V VG+ GKT + + D P V V Sbjct: 112 MVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRV 151 >5D0U-A nrPDB Length = 714 Score = 29.0 bits (64), Expect = 1.5, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 14/40 (35%), Gaps = 1/40 (2%) Query: 12 CVVVGDGAVGKTCLLMSYA-NDAFPEEYVPTVFDHYAVSV 50 V VG+ GKT + Y D P + + V Sbjct: 57 LVFVGETGSGKTTQIPQYVLYDELPHQTGKLIACTQPRRV 96 >4V7D-BZ nrPDB Length = 711 Score = 29.0 bits (64), Expect = 1.5, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 31/73 (42%), Gaps = 10/73 (13%) Query: 55 KQYLLGLYDTAGQEDYDRLRPLSYPMTDVFLICF-SV--VNPASFQNVKEEWVPELKEYA 111 + + + + DT G D+ S + D ++ + +V V P S + V W K Sbjct: 79 EPHRINIIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQPQS-ETV---WRQANKYKV 134 Query: 112 PNVPFLLIGTQID 124 P + F+ ++D Sbjct: 135 PRIAFV---NKMD 144 >1Z6G-A nrPDB Length = 218 Score = 29.0 bits (64), Expect = 1.5, Method: Composition-based stats. Identities = 9/36 (25%), Positives = 14/36 (38%), Gaps = 1/36 (2%) Query: 3 HGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEY 38 G + V+ G VGK L+ + FP + Sbjct: 17 RGSMNNIYPLVICGPSGVGKGTLIKKLL-NEFPNYF 51 >6H7G-A nrPDB Length = 346 Score = 29.0 bits (64), Expect = 1.6, Method: Composition-based stats. Identities = 7/23 (30%), Positives = 10/23 (43%), Gaps = 3/23 (13%) Query: 11 KCVVVG---DGAVGKTCLLMSYA 30 K VV+G D GK+ + Sbjct: 6 KTVVIGLAADSGCGKSTFMRRMT 28 >3PXG-A nrPDB Length = 468 Score = 29.0 bits (64), Expect = 1.6, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 20/43 (46%) Query: 13 VVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGK 55 V++G+ VGKT + A E + D +++ +G K Sbjct: 205 VLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMTLDMGTK 247 >5IDV-A nrPDB Length = 279 Score = 29.0 bits (64), Expect = 1.6, Method: Composition-based stats. Identities = 9/52 (17%), Positives = 18/52 (34%), Gaps = 4/52 (7%) Query: 12 CVVVGDGAVGKTCLLMSYANDAFPEEYVPTVF--DHYAVSVTVGGKQYLLGL 61 +VG GKT L+ F E ++ D + + + + + Sbjct: 68 VALVGRSGAGKTSLVNMLV--RFQEVSSGQIYLDDLPIRDIELSSLRTQIAM 117 >2QAG-B nrPDB Length = 427 Score = 29.0 bits (64), Expect = 1.6, Method: Composition-based stats. Identities = 8/33 (24%), Positives = 14/33 (42%) Query: 5 PGALMLKCVVVGDGAVGKTCLLMSYANDAFPEE 37 + VG+ +GK+ L+ + N F E Sbjct: 38 SQGFCFNILCVGETGLGKSTLMDTLFNTKFEGE 70 >5D4W-A nrPDB Length = 926 Score = 29.0 bits (64), Expect = 1.6, Method: Composition-based stats. Identities = 6/14 (42%), Positives = 11/14 (78%) Query: 13 VVVGDGAVGKTCLL 26 V++G+ VGKT ++ Sbjct: 220 VLIGEPGVGKTTIV 233 >2QU8-A nrPDB Length = 228 Score = 29.0 bits (64), Expect = 1.6, Method: Composition-based stats. Identities = 11/57 (19%), Positives = 20/57 (35%), Gaps = 3/57 (5%) Query: 12 CVVVGDGAVGKTCLLMSYAN-DAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQ 67 ++ G VGK+ + + + + Y T + Y K + DT G Sbjct: 32 IILSGAPNVGKSSFMNIVSRANVDVQSYSFTTKNLYVGHF--DHKLNKYQIIDTPGL 86 >6EMW-E nrPDB Length = 181 Score = 28.7 bits (63), Expect = 1.6, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 20/41 (48%) Query: 13 VVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVG 53 V++G+ VGKT + A E T+ D +S+ +G Sbjct: 44 VLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDKRVMSLDMG 84 >6EM8-A nrPDB Length = 818 Score = 28.7 bits (63), Expect = 1.6, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 20/41 (48%) Query: 13 VVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVG 53 V++G+ VGKT + A E T+ D +S+ +G Sbjct: 205 VLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDKRVMSLDMG 245 >4YPL-A nrPDB Length = 555 Score = 28.7 bits (63), Expect = 1.6, Method: Composition-based stats. Identities = 8/14 (57%), Positives = 9/14 (64%) Query: 12 CVVVGDGAVGKTCL 25 V+VG VGKT L Sbjct: 113 LVLVGPPGVGKTSL 126 >3PXI-A nrPDB Length = 758 Score = 28.7 bits (63), Expect = 1.7, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 20/43 (46%) Query: 13 VVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGK 55 V++G+ VGKT + A E + D +++ +G K Sbjct: 205 VLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMTLDMGTK 247 >5CDF-E nrPDB Length = 474 Score = 28.7 bits (63), Expect = 1.7, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 14/29 (48%) Query: 4 GPGALMLKCVVVGDGAVGKTCLLMSYAND 32 P + K + G VGKT L+M N+ Sbjct: 139 APYSKGGKIGLFGGAGVGKTVLIMELINN 167 >1WXQ-A nrPDB Length = 397 Score = 28.7 bits (63), Expect = 1.7, Method: Composition-based stats. Identities = 14/97 (14%), Positives = 39/97 (40%), Gaps = 10/97 (10%) Query: 103 WVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLNDMKEK---PVCVEQGQKL----AKEI 155 + E++ N P ++ + D D + + + +++ + +L A + Sbjct: 206 FASEIRRV--NKPMVIAANKADAASDEQIKRLVREEEKRGYIVIPTSAAAELTLRKAAKA 263 Query: 156 GACCYVECSALTQKGLKTVFDEAIIAILTPKKHTVKK 192 G Y+ A K L+ + ++ A++ K+ + + Sbjct: 264 GFIEYI-PGASEFKVLRDMSEKQKRALMVIKEKVLDR 299 >4YPN-A nrPDB Length = 293 Score = 28.7 bits (63), Expect = 1.7, Method: Composition-based stats. Identities = 8/14 (57%), Positives = 9/14 (64%) Query: 12 CVVVGDGAVGKTCL 25 V+VG VGKT L Sbjct: 146 LVLVGPPGVGKTSL 159 >6ED3-A nrPDB Length = 848 Score = 28.7 bits (63), Expect = 1.8, Method: Composition-based stats. Identities = 6/14 (42%), Positives = 11/14 (78%) Query: 13 VVVGDGAVGKTCLL 26 V++G+ VGKT ++ Sbjct: 203 VLIGEPGVGKTAIV 216 >5OFO-C nrPDB Length = 871 Score = 28.7 bits (63), Expect = 1.8, Method: Composition-based stats. Identities = 6/14 (42%), Positives = 11/14 (78%) Query: 13 VVVGDGAVGKTCLL 26 V++G+ VGKT ++ Sbjct: 207 VLIGEPGVGKTAIV 220 >3B5X-A nrPDB Length = 582 Score = 28.7 bits (63), Expect = 1.8, Method: Composition-based stats. Identities = 4/20 (20%), Positives = 8/20 (40%) Query: 12 CVVVGDGAVGKTCLLMSYAN 31 +VG GK+ + + Sbjct: 372 VALVGRSGSGKSTIANLFTR 391 >3J3U-A nrPDB Length = 810 Score = 28.7 bits (63), Expect = 1.8, Method: Composition-based stats. Identities = 8/49 (16%), Positives = 18/49 (36%), Gaps = 9/49 (18%) Query: 13 VVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGL 61 V++G+ VGKT + A + ++ + + L + Sbjct: 205 VLIGEPGVGKTAIAEGLAQQ---------IINNEVPEILRDKRVMTLDM 244 >2P65-A nrPDB Length = 187 Score = 28.7 bits (63), Expect = 1.8, Method: Composition-based stats. Identities = 6/14 (42%), Positives = 11/14 (78%) Query: 13 VVVGDGAVGKTCLL 26 +++GD VGKT ++ Sbjct: 47 ILLGDPGVGKTAIV 60 >4CIU-A nrPDB Length = 727 Score = 28.7 bits (63), Expect = 1.8, Method: Composition-based stats. Identities = 6/14 (42%), Positives = 11/14 (78%) Query: 13 VVVGDGAVGKTCLL 26 V++G+ VGKT ++ Sbjct: 61 VLIGEPGVGKTAIV 74 >6IC4-I nrPDB Length = 233 Score = 28.7 bits (63), Expect = 1.8, Method: Composition-based stats. Identities = 27/177 (15%), Positives = 58/177 (32%), Gaps = 35/177 (19%) Query: 13 VVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDR 72 ++G GKT LL + V + GK D A Sbjct: 31 AIMGPSGTGKTTLL-RLIGGQLVPDQG---------EVLLDGK-------DIAQMSRQRA 73 Query: 73 LRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEY--APNVPFLLIGTQID---LRD 127 + + +F + + ++NV ++ + + N+ L+ +++ LR Sbjct: 74 RMGMLFQSGALF------TDMSVYENVAFP----IRAHTLSENLIAELVALKLESVGLRG 123 Query: 128 DPKTL-ARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAIL 183 + + L+ + V + + +A + Y E A +K V I ++ Sbjct: 124 TEQLMPTELSGGMNRRVAL--ARAIALDPDLIMYDEPFAGQDPIVKGVLTRLIRSLR 178 >1QVR-A nrPDB Length = 854 Score = 28.7 bits (63), Expect = 1.8, Method: Composition-based stats. Identities = 6/14 (42%), Positives = 11/14 (78%) Query: 13 VVVGDGAVGKTCLL 26 V++G+ VGKT ++ Sbjct: 195 VLIGEPGVGKTAIV 208 >1JBK-A nrPDB Length = 195 Score = 28.7 bits (63), Expect = 1.9, Method: Composition-based stats. Identities = 6/14 (42%), Positives = 11/14 (78%) Query: 13 VVVGDGAVGKTCLL 26 V++G+ VGKT ++ Sbjct: 47 VLIGEPGVGKTAIV 60 >1IHU-A nrPDB Length = 589 Score = 28.7 bits (63), Expect = 1.9, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 5/54 (9%) Query: 12 CVVVGDGAVGKTCL----LMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGL 61 +++G G VGKT + + A+ F + ++ T +S+T+ G L + Sbjct: 330 IMLMGKGGVGKTTMAAAIAVRLADMGF-DVHLTTSDPAAHLSMTLNGSLNNLQV 382 >5MKK-A nrPDB Length = 611 Score = 28.7 bits (63), Expect = 2.0, Method: Composition-based stats. Identities = 7/22 (31%), Positives = 10/22 (45%), Gaps = 3/22 (13%) Query: 11 KCVVVGDGAVGKT---CLLMSY 29 K +VG GKT L+ + Sbjct: 387 KVALVGATGAGKTSVVSLIARF 408 >6QUZ-B nrPDB Length = 599 Score = 28.7 bits (63), Expect = 2.0, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 11/22 (50%), Gaps = 3/22 (13%) Query: 11 KCVVVGDGAVGKTC---LLMSY 29 K +VG GKT LLM + Sbjct: 383 KVALVGPTGSGKTTIVNLLMRF 404 >5THX-A nrPDB Length = 266 Score = 28.7 bits (63), Expect = 2.0, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 28/63 (44%), Gaps = 6/63 (9%) Query: 39 VPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPMTDVF---LICFSVVNPAS 95 P +++ + + V G +Y L A + + + P + D+ LI + +V+ Sbjct: 136 DPEIYEQFEKIILVHGVRYKKDL---AYYDRFTKELPEHEYLGDLVKEKLIYYPIVSREE 192 Query: 96 FQN 98 F++ Sbjct: 193 FEH 195 >6I3O-A nrPDB Length = 677 Score = 28.7 bits (63), Expect = 2.0, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 10/19 (52%) Query: 12 CVVVGDGAVGKTCLLMSYA 30 +VVG+ GKT + Y Sbjct: 31 LIVVGETGSGKTTQVTQYL 49 >1WDT-A nrPDB Length = 665 Score = 28.7 bits (63), Expect = 2.0, Method: Composition-based stats. Identities = 9/33 (27%), Positives = 13/33 (39%) Query: 1 MAHGPGALMLKCVVVGDGAVGKTCLLMSYANDA 33 M GA++ +VG GKT L + Sbjct: 1 MGTEGGAMIRTVALVGHAGSGKTTLTEALLYKT 33 >1JAL-A nrPDB Length = 363 Score = 28.7 bits (63), Expect = 2.0, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 11/22 (50%) Query: 10 LKCVVVGDGAVGKTCLLMSYAN 31 KC +VG VGK+ L + Sbjct: 3 FKCGIVGLPNVGKSTLFNALTK 24 >5GM6-Y nrPDB Length = 876 Score = 28.3 bits (62), Expect = 2.1, Method: Composition-based stats. Identities = 8/27 (29%), Positives = 14/27 (51%), Gaps = 1/27 (3%) Query: 12 CVVVGDGAVGKTCLLMSY-ANDAFPEE 37 +++G+ GKT L Y D F ++ Sbjct: 242 LIIMGETGSGKTTQLPQYLVEDGFTDQ 268 >5ZME-A nrPDB Length = 687 Score = 28.3 bits (62), Expect = 2.2, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 25/68 (36%), Gaps = 12/68 (17%) Query: 12 CVVVGDGAVGKTCLLMSYANDAFPEEYVPTVF---------DHYAVSVTVGGKQYLLGLY 62 ++ G G VGKT L S A + V D A V+ GG+ LL Sbjct: 15 IMISGKGGVGKTSLSASLAVKLAAAGHTTLVVSTDPAHSLSDSLAQDVS-GGRPVLLQGT 73 Query: 63 D--TAGQE 68 D G E Sbjct: 74 DLPLWGLE 81 >1R6B-X nrPDB Length = 758 Score = 28.3 bits (62), Expect = 2.2, Method: Composition-based stats. Identities = 6/14 (42%), Positives = 10/14 (71%) Query: 13 VVVGDGAVGKTCLL 26 ++VG+ VGKT + Sbjct: 211 LLVGESGVGKTAIA 224 >1IRQ-A nrPDB Length = 71 Score = 28.3 bits (62), Expect = 2.2, Method: Composition-based stats. Identities = 9/69 (13%), Positives = 25/69 (36%), Gaps = 4/69 (5%) Query: 117 LLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFD 176 +++G L +K + ++ ++ ++ +E A +K V D Sbjct: 1 MIVGN---LGAQKAKRNDTPISAKKDIMGDKTVRVRADLHHIIKIET-AKNGGNVKEVMD 56 Query: 177 EAIIAILTP 185 +A+ + Sbjct: 57 QALEEYIRK 65 >2I3B-A nrPDB Length = 189 Score = 28.3 bits (62), Expect = 2.3, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%), Gaps = 2/50 (4%) Query: 12 CVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGL 61 + G VGKT L+ A++ VP V Y V GG++ + Sbjct: 4 VFLTGPPGVGKTTLIHK-ASEVLKSSGVP-VDGFYTEEVRQGGRRIGFDV 51 >6G2G-A nrPDB Length = 310 Score = 28.3 bits (62), Expect = 2.3, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 10/19 (52%) Query: 12 CVVVGDGAVGKTCLLMSYA 30 V+ G G VGK+ + A Sbjct: 11 LVLSGKGGVGKSSVTTQLA 29 >5IFK-A nrPDB Length = 312 Score = 28.3 bits (62), Expect = 2.3, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 21/43 (48%), Gaps = 5/43 (11%) Query: 140 EKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI 182 E PV +++G+ +E+ +E SA K ++ + + I Sbjct: 269 ENPVPIQEGKATHEEV-----LENSAKASKDVQELIFSVVAEI 306 >3N5F-A nrPDB Length = 408 Score = 28.3 bits (62), Expect = 2.3, Method: Composition-based stats. Identities = 8/61 (13%), Positives = 21/61 (34%), Gaps = 10/61 (16%) Query: 64 TAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQI 123 TA + L +F+ +++ + + P+ +L+G+ + Sbjct: 31 TAEERRAKDLVASYMREAGLFV----------YEDAAGNLIGRKEGTNPDATVVLVGSHL 80 Query: 124 D 124 D Sbjct: 81 D 81 >4HSE-A nrPDB Length = 397 Score = 28.3 bits (62), Expect = 2.3, Method: Composition-based stats. Identities = 6/14 (42%), Positives = 11/14 (78%) Query: 13 VVVGDGAVGKTCLL 26 V++G+ VGKT ++ Sbjct: 58 VLIGEPGVGKTAIV 71 >5JZV-A nrPDB Length = 206 Score = 28.3 bits (62), Expect = 2.4, Method: Composition-based stats. Identities = 9/25 (36%), Positives = 12/25 (48%), Gaps = 1/25 (4%) Query: 1 MAHGPGALMLKCVVVGDGAVGKTCL 25 M G L+ ++ G VGKT L Sbjct: 30 MGRGS-MLLPNILLTGTPGVGKTTL 53 >2XND-D nrPDB Length = 467 Score = 28.3 bits (62), Expect = 2.4, Method: Composition-based stats. Identities = 11/29 (37%), Positives = 14/29 (48%) Query: 4 GPGALMLKCVVVGDGAVGKTCLLMSYAND 32 P A K + G VGKT L+M N+ Sbjct: 136 APYAKGGKIGLFGGAGVGKTVLIMELINN 164 >2W6I-D nrPDB Length = 528 Score = 28.3 bits (62), Expect = 2.4, Method: Composition-based stats. Identities = 11/29 (37%), Positives = 14/29 (48%) Query: 4 GPGALMLKCVVVGDGAVGKTCLLMSYAND 32 P A K + G VGKT L+M N+ Sbjct: 194 APYAKGGKIGLFGGAGVGKTVLIMELINN 222 >2P5T-B nrPDB Length = 253 Score = 28.3 bits (62), Expect = 2.5, Method: Composition-based stats. Identities = 7/48 (14%), Positives = 12/48 (25%), Gaps = 1/48 (2%) Query: 2 AHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVS 49 + ++ G GKT + F V D + Sbjct: 25 GKKSSKQPIAILLGGQSGAGKTT-IHRIKQKEFQGNIVIIDGDSFRSQ 71 >5ZLU-EE nrPDB Length = 497 Score = 28.3 bits (62), Expect = 2.5, Method: Composition-based stats. Identities = 7/16 (43%), Positives = 10/16 (62%) Query: 11 KCVVVGDGAVGKTCLL 26 + +VGD GK+ LL Sbjct: 32 RIGLVGDNGAGKSSLL 47 Score = 26.7 bits (58), Expect = 6.8, Method: Composition-based stats. Identities = 7/16 (43%), Positives = 8/16 (50%) Query: 11 KCVVVGDGAVGKTCLL 26 K + G GKT LL Sbjct: 324 KVAITGSNGTGKTSLL 339 >6FA9-A nrPDB Length = 655 Score = 28.3 bits (62), Expect = 2.5, Method: Composition-based stats. Identities = 6/20 (30%), Positives = 11/20 (55%) Query: 12 CVVVGDGAVGKTCLLMSYAN 31 ++VG+ GKT + Y + Sbjct: 50 LILVGETGSGKTTQIPQYLH 69 >6BZR-B nrPDB Length = 251 Score = 28.3 bits (62), Expect = 2.5, Method: Composition-based stats. Identities = 6/16 (37%), Positives = 8/16 (50%) Query: 11 KCVVVGDGAVGKTCLL 26 K +VG GK+ L Sbjct: 42 KVGIVGRTGAGKSSLA 57 >4A9A-A nrPDB Length = 376 Score = 28.3 bits (62), Expect = 2.6, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 19/53 (35%), Gaps = 3/53 (5%) Query: 12 CVVVGDGAVGKTCLLMSYA-NDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYD 63 VG +VGK+ LL ++ EY T + G + + D Sbjct: 75 VGFVGFPSVGKSTLLSKLTGTESEAAEYEFTTLVTVPGVIRYKG--AKIQMLD 125 >3PV0-A nrPDB Length = 381 Score = 28.3 bits (62), Expect = 2.6, Method: Composition-based stats. Identities = 7/16 (43%), Positives = 8/16 (50%) Query: 12 CVVVGDGAVGKTCLLM 27 V VG GK+ LL Sbjct: 32 VVFVGPSGCGKSTLLR 47 >2OHF-A nrPDB Length = 396 Score = 28.3 bits (62), Expect = 2.6, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 25/75 (33%), Gaps = 18/75 (24%) Query: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVP--TVFDHYAVSVTVGGKQYL--------- 58 LK +VG VGK+ N E P T+ D V V +++ Sbjct: 23 LKIGIVGLPNVGKSTFFNVLTNSQASAENFPFCTI-DPNESRVPVPDERFDFLCQYHKPA 81 Query: 59 ------LGLYDTAGQ 67 L + D AG Sbjct: 82 SKIPAFLNVVDIAGL 96 >5B6K-A nrPDB Length = 366 Score = 28.3 bits (62), Expect = 2.6, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 1/42 (2%) Query: 68 EDYDRLRPLSYPMTD-VFLICFSVVNPASFQNVKEEWVPELK 108 E D L+ + + D + I + +P +F +V E+ ++K Sbjct: 56 EKGDHLKNVIFKGGDFNYEIVKDISDPTAFDHVFEKHGKDIK 97 >5IK2-D nrPDB Length = 462 Score = 28.3 bits (62), Expect = 2.6, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 13/29 (44%) Query: 4 GPGALMLKCVVVGDGAVGKTCLLMSYAND 32 P A K + G VGKT L+ N+ Sbjct: 139 APYAKGGKIGLFGGAGVGKTVLIQELINN 167 >4Q7L-A nrPDB Length = 256 Score = 28.3 bits (62), Expect = 2.6, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 11/22 (50%), Gaps = 3/22 (13%) Query: 11 KCVVVGDGAVGKTC---LLMSY 29 K +VG GKT LLM + Sbjct: 33 KVALVGPTGSGKTTIVNLLMRF 54 >1M0T-A nrPDB Length = 491 Score = 28.3 bits (62), Expect = 2.7, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 33/92 (35%), Gaps = 13/92 (14%) Query: 33 AFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVN 92 F + V FD + + K L + DT QE + + Y ++ + Sbjct: 244 KFGTKSVRLTFDDVNDKLFIDDKTGKLFIRDT-EQE----IAVVYYRTG------YTTTD 292 Query: 93 PASFQNVKEEWVPE--LKEYAPNVPFLLIGTQ 122 S ++ + E AP++ L G++ Sbjct: 293 YTSEKDWEARLFLEKSFAIKAPDLLTQLSGSK 324 >6QUZ-A nrPDB Length = 587 Score = 28.3 bits (62), Expect = 2.8, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 14/26 (53%), Gaps = 3/26 (11%) Query: 2 AHGPGALMLKCVVVGDGAVGKTCLLM 27 + PG+L V+G+ GK+ L+ Sbjct: 365 SVKPGSL---VAVLGETGSGKSTLMN 387 >4HUQ-A nrPDB Length = 290 Score = 27.9 bits (61), Expect = 2.9, Method: Composition-based stats. Identities = 7/39 (17%), Positives = 17/39 (43%), Gaps = 3/39 (7%) Query: 12 CVVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHYAVS 49 ++G GK+ L+ +A + T+ D + ++ Sbjct: 36 LAIIGHTGSGKSTLIQQL--NALLKPTSGTIKIDEFTIT 72 >2WJI-A nrPDB Length = 165 Score = 27.9 bits (61), Expect = 2.9, Method: Composition-based stats. Identities = 5/53 (9%), Positives = 19/53 (35%), Gaps = 1/53 (1%) Query: 7 ALMLKCVVVGDGAVGKTCLLMSYA-NDAFPEEYVPTVFDHYAVSVTVGGKQYL 58 + ++G+ VGK+ + + + + + + G+++ Sbjct: 1 MKSYEIALIGNPNVGKSTIFNALTGENVYIGNWPGVTVEKKEGEFEYNGEKFK 53 >6HA8-V nrPDB Length = 548 Score = 27.9 bits (61), Expect = 3.0, Method: Composition-based stats. Identities = 7/17 (41%), Positives = 9/17 (52%) Query: 11 KCVVVGDGAVGKTCLLM 27 K ++G GKT LL Sbjct: 325 KVAIIGPNGSGKTTLLN 341 >4FID-A nrPDB Length = 340 Score = 27.9 bits (61), Expect = 3.0, Method: Composition-based stats. Identities = 8/33 (24%), Positives = 14/33 (42%), Gaps = 3/33 (9%) Query: 12 CVVVGDGAVGKTCLLMSYA---NDAFPEEYVPT 41 +++G G GK+ + FPE+ T Sbjct: 8 VMLLGSGESGKSTIAKQLKILFGGGFPEQERAT 40 >4O0M-A nrPDB Length = 524 Score = 27.9 bits (61), Expect = 3.1, Method: Composition-based stats. Identities = 7/35 (20%), Positives = 13/35 (37%) Query: 13 VVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYA 47 +V G GKT + + + P +F + Sbjct: 44 LVSGTSGTGKTLFAVQFLYNGITIFNEPGIFVTFE 78 >1EZ4-A nrPDB Length = 318 Score = 27.9 bits (61), Expect = 3.1, Method: Composition-based stats. Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 3/34 (8%) Query: 11 KCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFD 44 K V+VGDGAVG + + A EE+V + D Sbjct: 7 KVVLVGDGAVG-SSYAFAMAQQGIAEEFV--IVD 37 >3LXX-A nrPDB Length = 239 Score = 27.9 bits (61), Expect = 3.2, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 44/141 (31%), Gaps = 23/141 (16%) Query: 5 PGALMLKCVVVGDGAVGKT----CLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLG 60 P L+ V+VG GK+ +L F + K+ L Sbjct: 25 PRNSQLRIVLVGKTGAGKSATGNSILGR---KVFHSGTAAKSITKKCEKRSSSWKETELV 81 Query: 61 LYDTAGQEDYDRLRP-------------LSYPMTDVFLICFSVVNPASFQN-VKEEWVPE 106 + DT G +D P L+ P L+ + ++ E+ + Sbjct: 82 VVDTPG--IFDTEVPNAETSKEIIRCILLTSPGPHALLLVVPLGRYTEEEHKATEKILKM 139 Query: 107 LKEYAPNVPFLLIGTQIDLRD 127 E A + L+ + DL D Sbjct: 140 FGERARSFMILIFTRKDDLGD 160 >4MKI-B nrPDB Length = 298 Score = 27.9 bits (61), Expect = 3.3, Method: Composition-based stats. Identities = 8/48 (16%), Positives = 16/48 (33%), Gaps = 5/48 (10%) Query: 12 CVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLL 59 ++G GK+ L+ P+ Y + + K+ L Sbjct: 40 VGIIGHTGSGKSTLIQQL-----NGLLKPSKGKIYINGIDITDKKVSL 82 >3Q06-A nrPDB Length = 231 Score = 27.9 bits (61), Expect = 3.3, Method: Composition-based stats. Identities = 7/35 (20%), Positives = 17/35 (48%), Gaps = 3/35 (8%) Query: 41 TVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRP 75 T ++ T+ G+ + L + G+E +++ R Sbjct: 189 TEEENLRKKKTMDGEYFTLQIR---GRERFEQFRE 220 >2IW3-A nrPDB Length = 986 Score = 27.9 bits (61), Expect = 3.3, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 17/43 (39%), Gaps = 5/43 (11%) Query: 7 ALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVS 49 +L + V+G GK+ L+ E +PT + Y Sbjct: 697 SLSSRIAVIGPNGAGKSTLINVLTG-----ELLPTSGEVYTHE 734 >4Q7K-A nrPDB Length = 250 Score = 27.9 bits (61), Expect = 3.3, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 14/26 (53%), Gaps = 3/26 (11%) Query: 2 AHGPGALMLKCVVVGDGAVGKTCLLM 27 + PG+L V+G+ GK+ L+ Sbjct: 27 SVKPGSL---VAVLGETGSGKSTLMN 49 >3VX4-A nrPDB Length = 273 Score = 27.9 bits (61), Expect = 3.3, Method: Composition-based stats. Identities = 7/16 (43%), Positives = 8/16 (50%) Query: 11 KCVVVGDGAVGKTCLL 26 K +VG GKT L Sbjct: 63 KVSLVGASGSGKTTLA 78 >1E94-E nrPDB Length = 449 Score = 27.9 bits (61), Expect = 3.4, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 20/52 (38%), Gaps = 2/52 (3%) Query: 12 CVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYD 63 +++G VGKT + A A ++ V V GK+ + D Sbjct: 59 ILMIGPTGVGKTEIARRLAKLA-NAPFIK-VEATKFTEVGYVGKEVDSIIRD 108 >5DO7-A nrPDB Length = 666 Score = 27.9 bits (61), Expect = 3.4, Method: Composition-based stats. Identities = 6/15 (40%), Positives = 8/15 (53%) Query: 12 CVVVGDGAVGKTCLL 26 ++G GKT LL Sbjct: 82 MCILGSSGSGKTTLL 96 >4XD7-D nrPDB Length = 483 Score = 27.9 bits (61), Expect = 3.5, Method: Composition-based stats. Identities = 7/22 (31%), Positives = 11/22 (50%) Query: 11 KCVVVGDGAVGKTCLLMSYAND 32 K + G VGKT L+ ++ Sbjct: 163 KIGLFGGAGVGKTVLIQELIHN 184 >5JSZ-B nrPDB Length = 287 Score = 27.9 bits (61), Expect = 3.5, Method: Composition-based stats. Identities = 5/18 (27%), Positives = 9/18 (50%) Query: 12 CVVVGDGAVGKTCLLMSY 29 +VG GK+ L+ + Sbjct: 36 IALVGHTGSGKSTLMQHF 53 >1IM2-A nrPDB Length = 444 Score = 27.9 bits (61), Expect = 3.5, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 20/52 (38%), Gaps = 2/52 (3%) Query: 12 CVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYD 63 +++G VGKT + A A ++ V V GK+ + D Sbjct: 53 ILMIGPTGVGKTEIARRLAKLA-NAPFIK-VEATKFTEVGYVGKEVDSIIRD 102 >4XGC-D nrPDB Length = 459 Score = 27.9 bits (61), Expect = 3.6, Method: Composition-based stats. Identities = 11/52 (21%), Positives = 21/52 (40%), Gaps = 2/52 (3%) Query: 12 CVVVGDGAVGKTCLLMSYANDAFPEEY--VPTVFDHYAVSVTVGGKQYLLGL 61 +++G GKT L+ S D P + T+ H ++ + L + Sbjct: 52 LLLLGPRGSGKTTLINSVLADLLPNKSFGENTLIVHLDGNLHTDDRVALKSI 103 >2XOK-D nrPDB Length = 511 Score = 27.5 bits (60), Expect = 3.7, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 12/29 (41%) Query: 4 GPGALMLKCVVVGDGAVGKTCLLMSYAND 32 P A K + G VGKT + N+ Sbjct: 178 APYARGGKIGLFGGAGVGKTVFIQELINN 206 >2QTH-A nrPDB Length = 364 Score = 27.5 bits (60), Expect = 3.7, Method: Composition-based stats. Identities = 29/176 (16%), Positives = 61/176 (34%), Gaps = 30/176 (17%) Query: 12 CVVVGDGAVGKTCLLMSYANDAFPEEYVP-TVFDHYAVSVTVGGKQYLLGLYDTAGQED- 69 +VG GKT L S + T ++ + ++ +L DT G Sbjct: 182 IGIVGYTNSGKTSLFNSLTGLTQKVDTKLFTTMSPKRYAIPINNRKIML--VDTVGFIRG 239 Query: 70 ---------YDRLRPLSYPMTDVFLICFSVVNPASF--QNVKEEWVPELKEYAPNVPFLL 118 + L Y +D ++ + + ++ + + P L+ Sbjct: 240 IPPQIVDAFFVTLSEAKY--SDALILVIDSTFSENLLIETLQSSFEILREIGVSGKPILV 297 Query: 119 IGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCY--VECSALTQKGLK 172 +ID ++N K + + + KL+KE+ + + + SAL + L+ Sbjct: 298 TLNKID---------KINGDLYKKLDLVE--KLSKELYSPIFDVIPISALKRTNLE 342 >1OFI-A nrPDB Length = 310 Score = 27.5 bits (60), Expect = 3.7, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 20/52 (38%), Gaps = 2/52 (3%) Query: 12 CVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYD 63 +++G VGKT + A A ++ V V GK+ + D Sbjct: 53 ILMIGPTGVGKTEIARRLAKLA-NAPFIK-VEATKFTEVGYVGKEVDSIIRD 102 >6FKI-F nrPDB Length = 498 Score = 27.5 bits (60), Expect = 3.8, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 13/29 (44%) Query: 4 GPGALMLKCVVVGDGAVGKTCLLMSYAND 32 P K + G VGKT L+M N+ Sbjct: 160 APYRRGGKIGLFGGAGVGKTVLIMELINN 188 >5NIK-J nrPDB Length = 654 Score = 27.5 bits (60), Expect = 3.8, Method: Composition-based stats. Identities = 5/16 (31%), Positives = 8/16 (50%) Query: 12 CVVVGDGAVGKTCLLM 27 +VG GK+ L+ Sbjct: 37 VAIVGASGSGKSTLMN 52 >5LJA-A nrPDB Length = 231 Score = 27.5 bits (60), Expect = 3.8, Method: Composition-based stats. Identities = 5/16 (31%), Positives = 8/16 (50%) Query: 12 CVVVGDGAVGKTCLLM 27 +VG GK+ L+ Sbjct: 37 VAIVGASGSGKSTLMN 52 >5LQY-D nrPDB Length = 476 Score = 27.5 bits (60), Expect = 3.9, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 12/29 (41%) Query: 4 GPGALMLKCVVVGDGAVGKTCLLMSYAND 32 P A K + G VGKT + N+ Sbjct: 143 APYARGGKIGLFGGAGVGKTVFIQELINN 171 >5FL7-D nrPDB Length = 509 Score = 27.5 bits (60), Expect = 3.9, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 12/29 (41%) Query: 4 GPGALMLKCVVVGDGAVGKTCLLMSYAND 32 P A K + G VGKT + N+ Sbjct: 176 APYARGGKIGLFGGAGVGKTVFIQELINN 204 >4ZU9-A nrPDB Length = 582 Score = 27.5 bits (60), Expect = 4.1, Method: Composition-based stats. Identities = 26/161 (16%), Positives = 59/161 (36%), Gaps = 22/161 (13%) Query: 21 GKTCLLMSYA---NDAFPEEYV-PTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPL 76 GKT L+ + D PEE D + L + D G E + + Sbjct: 15 GKTTLIKTLTGIDTDRLPEEKKRGLSIDIGFAYIDFPDINTRLEIIDVPGHERFIKNAIA 74 Query: 77 SYPMTDVFLICFSVVN---PASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDPKTLA 133 ++ P + ++++ +K + + T++D D+ Sbjct: 75 GICSASGLILVVDPNEGIMPQTIEHLRVAKSFGIKHG------IAVLTKMDKVDE----E 124 Query: 134 RLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTV 174 + +E+ + + +++ EI V+ SA+T +G++ + Sbjct: 125 LAHIAEEELIAFLEKEEMNMEI-----VKVSAVTGQGIEDL 160 >5JWO-A nrPDB Length = 247 Score = 27.5 bits (60), Expect = 4.2, Method: Composition-based stats. Identities = 7/35 (20%), Positives = 13/35 (37%) Query: 13 VVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYA 47 +V G GKT + + + P +F + Sbjct: 36 LVSGTSGTGKTLFAVQFLYNGITIFNEPGIFVTFE 70 >6D00-1 nrPDB Length = 883 Score = 27.5 bits (60), Expect = 4.2, Method: Composition-based stats. Identities = 8/29 (27%), Positives = 10/29 (34%), Gaps = 4/29 (13%) Query: 13 VVVGDGAVGKTC----LLMSYANDAFPEE 37 +VG+ VGKT L P Sbjct: 203 CLVGEPGVGKTAIAEGLANRIVKGDIPSS 231 >2XUA-A nrPDB Length = 266 Score = 27.5 bits (60), Expect = 4.2, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 2/46 (4%) Query: 144 CVEQGQKLAKEIGACCYVECSALTQKGLK--TVFDEAIIAILTPKK 187 QG++LA+ I YVE A ++ F + ++ LT +K Sbjct: 221 TPAQGRELAQAIAGARYVELDASHISNIERADAFTKTVVDFLTEQK 266 >4Z8X-A nrPDB Length = 497 Score = 27.5 bits (60), Expect = 4.3, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 12 CVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTA 65 ++ G+ VGKT L + A +A + D + V VG + L++TA Sbjct: 54 VLLYGEPGVGKTLLAKAIAGEAHVPFISVSGSDFVEMFVGVGAARVR-DLFETA 106 >2GHI-A nrPDB Length = 260 Score = 27.5 bits (60), Expect = 4.3, Method: Composition-based stats. Identities = 22/191 (11%), Positives = 58/191 (30%), Gaps = 50/191 (26%) Query: 12 CVVVGDGAVGKTC---LLMSYAN------------DAFPEEYVPTVFDHYAVSVTVGGKQ 56 C +VG GK+ LL + + + + + ++ + + Sbjct: 49 CALVGHTGSGKSTIAKLLYRFYDAEGDIKIGGKNVNKYNRNSIRSIIGIVPQDTILFNET 108 Query: 57 YLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPF 116 + Y +L + + K + + E P Sbjct: 109 IKYNIL-------YGKL---------------DATDEEVIKATKSAQLYDFIEALPKKWD 146 Query: 117 LLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVE-CSALTQKGLKTVF 175 ++G + +L+ + + + + + L K+ + E S+L K + +F Sbjct: 147 TIVGNK---------GMKLSGGERQRIAI--ARCLLKDPKIVIFDEATSSLDSKT-EYLF 194 Query: 176 DEAIIAILTPK 186 +A+ + + Sbjct: 195 QKAVEDLRKNR 205 >2GA8-A nrPDB Length = 359 Score = 27.5 bits (60), Expect = 4.3, Method: Composition-based stats. Identities = 7/48 (14%), Positives = 15/48 (31%), Gaps = 6/48 (12%) Query: 12 CVVVGDGAVGKTCLLMSYAN------DAFPEEYVPTVFDHYAVSVTVG 53 ++VG GK+ + F E+ + + + V Sbjct: 27 VILVGSPGSGKSTIAEELCQIINEKYHTFLSEHPNVIEVNDRLKPMVN 74 >1U0L-A nrPDB Length = 301 Score = 27.5 bits (60), Expect = 4.3, Method: Composition-based stats. Identities = 16/108 (14%), Positives = 39/108 (36%), Gaps = 15/108 (13%) Query: 67 QEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLR 126 + L D ++ +V P + + ++++ ++ ++ ++DL Sbjct: 71 LHRKNLLTKPHVANVDQVILVVTVKMPETSTYIIDKFLVLAEKNELETVMVI--NKMDLY 128 Query: 127 DDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTV 174 D+ D K +E+ G V+ SA T G++ + Sbjct: 129 DE--------DDLRKVRELEEIYS-----GLYPIVKTSAKTGMGIEEL 163 >3DEF-A nrPDB Length = 262 Score = 27.5 bits (60), Expect = 4.4, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 32/77 (41%), Gaps = 4/77 (5%) Query: 12 CVVVGDGAVGKTCLLMSYANDAF--PEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQED 69 +V+G G VGK+ + S + + VS T+GG + + + DT G + Sbjct: 39 VLVLGKGGVGKSSTVNSLIGEQVVRVSPFQAEGLRPVMVSRTMGG--FTINIIDTPGLVE 96 Query: 70 YDRLRPLSYPMTDVFLI 86 + + + FL+ Sbjct: 97 AGYVNHQALELIKGFLV 113 >5GKO-A nrPDB Length = 671 Score = 27.5 bits (60), Expect = 4.5, Method: Composition-based stats. Identities = 5/16 (31%), Positives = 8/16 (50%) Query: 12 CVVVGDGAVGKTCLLM 27 +VG GK+ L+ Sbjct: 46 VAIVGQSGSGKSTLMN 61 >5TV4-A nrPDB Length = 605 Score = 27.5 bits (60), Expect = 4.6, Method: Composition-based stats. Identities = 5/21 (23%), Positives = 9/21 (42%), Gaps = 3/21 (14%) Query: 12 CVVVGDGAVGKT---CLLMSY 29 +VG GK+ L+ + Sbjct: 395 VALVGRSGSGKSTIASLITRF 415 >3EPJ-A nrPDB Length = 409 Score = 27.1 bits (59), Expect = 4.9, Method: Composition-based stats. Identities = 7/21 (33%), Positives = 10/21 (47%) Query: 12 CVVVGDGAVGKTCLLMSYAND 32 V+ G VGK+ L + A Sbjct: 5 IVIAGTTGVGKSQLSIQLAQK 25 >2P4Q-A nrPDB Length = 497 Score = 27.1 bits (59), Expect = 5.0, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 20/50 (40%), Gaps = 11/50 (22%) Query: 29 YANDAFPEEY---VPTVFDHYAVSVT--------VGGKQYLLGLYDTAGQ 67 + + + + V D + V +T V GK + + DTAGQ Sbjct: 217 FTDKEISDVFAKWNNGVLDSFLVEITRDILKFDDVDGKPLVEKIMDTAGQ 266 >5AJ2-A nrPDB Length = 355 Score = 27.1 bits (59), Expect = 5.3, Method: Composition-based stats. Identities = 6/17 (35%), Positives = 10/17 (58%) Query: 12 CVVVGDGAVGKTCLLMS 28 C++ G+ GK+ LL Sbjct: 165 CLIEGESGKGKSTLLQR 181 >6FOC-D nrPDB Length = 475 Score = 27.1 bits (59), Expect = 5.3, Method: Composition-based stats. Identities = 8/23 (34%), Positives = 10/23 (43%) Query: 5 PGALMLKCVVVGDGAVGKTCLLM 27 P K + G VGKT L+ Sbjct: 149 PYVRGGKIALFGGAGVGKTVLIQ 171 >2IYT-A nrPDB Length = 184 Score = 27.1 bits (59), Expect = 5.5, Method: Composition-based stats. Identities = 11/65 (16%), Positives = 24/65 (36%), Gaps = 10/65 (15%) Query: 11 KCVVVGDGAVGKTCLLMSYAN--DAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQE 68 K V+VG GK+ + A + + S+ ++ T G++ Sbjct: 4 KAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIA--------DIFATDGEQ 55 Query: 69 DYDRL 73 ++ R+ Sbjct: 56 EFRRI 60 >5CA8-A nrPDB Length = 692 Score = 27.1 bits (59), Expect = 5.7, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 14/43 (32%), Gaps = 6/43 (13%) Query: 12 CVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGG 54 V G + GK+ LL F + V D T G Sbjct: 61 ISVFGSQSTGKSTLLNRL----FNTNFD--VMDELNRQQTTKG 97 >2B8N-A nrPDB Length = 429 Score = 27.1 bits (59), Expect = 5.7, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 31/74 (41%), Gaps = 7/74 (9%) Query: 94 ASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLNDMKEKPVCV-------E 146 + ++VK + E ++ NV LIG + D+ K+LA+ + + E Sbjct: 235 ETSESVKRAILQETPKHLSNVEIHLIGNVQKVCDEAKSLAKEKGFNAEIITTSLDCEARE 294 Query: 147 QGQKLAKEIGACCY 160 G+ +A + + Sbjct: 295 AGRFIASIMKEVKF 308 >6C2V-A nrPDB Length = 115 Score = 27.1 bits (59), Expect = 5.8, Method: Composition-based stats. Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 2/33 (6%) Query: 12 CVVVGDGAVGKTCL--LMSYANDAFPEEYVPTV 42 V+VG GKT L L A + P+ + TV Sbjct: 5 VVIVGPSGAGKTTLDELARKAKEEVPDAEIRTV 37 >5DGX-A nrPDB Length = 256 Score = 27.1 bits (59), Expect = 5.9, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 18/54 (33%), Gaps = 8/54 (14%) Query: 12 CVVVGDGAVGKTCLLMSYANDAFPEEYVPTV----FDHYAVSVTVGGKQYLLGL 61 VG GKT L + F ++ + D +T+ + L + Sbjct: 47 VAFVGKSGSGKTTLTSIIS--RFYTQHEGEILLDGVDT--RELTLENLRSHLSI 96 >5LZT-jj nrPDB Length = 637 Score = 26.7 bits (58), Expect = 6.6, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 22/58 (37%), Gaps = 2/58 (3%) Query: 116 FLLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKT 173 +LI ++D + R + KEK V + ++ CS LT LK Sbjct: 354 IVLI-NKMDDPTVNWSNERYEECKEKLVPFLKKVGF-NPKKDIHFMPCSGLTGANLKE 409 >5EUM-A nrPDB Length = 258 Score = 26.7 bits (58), Expect = 6.6, Method: Composition-based stats. Identities = 5/21 (23%), Positives = 9/21 (42%), Gaps = 3/21 (14%) Query: 12 CVVVGDGAVGKTC---LLMSY 29 +VG GK+ L+ + Sbjct: 48 VALVGRSGSGKSTIANLVTRF 68 >2R3A-A nrPDB Length = 300 Score = 26.7 bits (58), Expect = 6.7, Method: Composition-based stats. Identities = 9/44 (20%), Positives = 16/44 (36%) Query: 99 VKEEWVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLNDMKEKP 142 + W EL + + + +DL P +N+ K P Sbjct: 26 ALQRWQDELNRRKNHKGMIFVENTVDLEGPPSDFYYINEYKPAP 69 >2IF2-A nrPDB Length = 204 Score = 26.7 bits (58), Expect = 7.0, Method: Composition-based stats. Identities = 6/49 (12%), Positives = 16/49 (32%), Gaps = 1/49 (2%) Query: 11 KCVVVGDGAVGKTCLLMSYAN-DAFPEEYVPTVFDHYAVSVTVGGKQYL 58 + + G+ GK+ + + A+ + + Y V + Sbjct: 3 RIGLTGNIGCGKSTVAQMFRELGAYVLDADKLIHSFYRKGHPVYEEVVK 51 >4D61-i nrPDB Length = 426 Score = 26.7 bits (58), Expect = 7.3, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 22/58 (37%), Gaps = 2/58 (3%) Query: 116 FLLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKT 173 +LI ++D + R + KEK V + ++ CS LT LK Sbjct: 145 IVLI-NKMDDPTVNWSNERYEECKEKLVPFLKKVGF-NPKKDIHFMPCSGLTGANLKE 200 >2ZBK-A nrPDB Length = 389 Score = 26.7 bits (58), Expect = 7.6, Method: Composition-based stats. Identities = 7/26 (26%), Positives = 12/26 (46%) Query: 61 LYDTAGQEDYDRLRPLSYPMTDVFLI 86 +YD ++Y +R L Y L+ Sbjct: 89 IYDALVSDEYPTIRDLYYRGKHSLLL 114 >1Z47-A nrPDB Length = 355 Score = 26.7 bits (58), Expect = 7.8, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 18/47 (38%), Gaps = 10/47 (21%) Query: 12 CVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYL 58 ++G GKT +L A PT D + +GGK+ Sbjct: 44 VGLLGPSGSGKTTILRLIAGLE-----RPTKGDVW-----IGGKRVT 80 >6AMN-A nrPDB Length = 349 Score = 26.7 bits (58), Expect = 7.8, Method: Composition-based stats. Identities = 8/30 (26%), Positives = 17/30 (56%), Gaps = 1/30 (3%) Query: 13 VVVGDGAVGKTCLLMSYANDAFPEEYVPTV 42 ++G+ +GKT ++ A ++ VPT+ Sbjct: 206 CLIGEPGIGKTAIIEGVAQRIIDDD-VPTI 234 >5VY8-A nrPDB Length = 908 Score = 26.3 bits (57), Expect = 8.9, Method: Composition-based stats. Identities = 8/30 (26%), Positives = 17/30 (56%), Gaps = 1/30 (3%) Query: 13 VVVGDGAVGKTCLLMSYANDAFPEEYVPTV 42 ++G+ +GKT ++ A ++ VPT+ Sbjct: 209 CLIGEPGIGKTAIIEGVAQRIIDDD-VPTI 237 >3ZJC-A nrPDB Length = 305 Score = 26.3 bits (57), Expect = 9.0, Method: Composition-based stats. Identities = 6/20 (30%), Positives = 9/20 (45%) Query: 5 PGALMLKCVVVGDGAVGKTC 24 L+ V+VG GK+ Sbjct: 9 SEDRSLRIVLVGKTGSGKSA 28 >3PEN-A nrPDB Length = 403 Score = 26.3 bits (57), Expect = 9.0, Method: Composition-based stats. Identities = 9/77 (11%), Positives = 27/77 (35%), Gaps = 8/77 (10%) Query: 116 FLLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVF 175 +++ ++D+ + + + A+ + SAL + + ++ Sbjct: 132 LIIVQNKVDV-----VSKEEALSQYRQIKQFTKGTWAE---NVPIIPVSALHKINIDSLI 183 Query: 176 DEAIIAILTPKKHTVKK 192 + I TP + +K Sbjct: 184 EGIEEYIKTPYRDLSQK 200 >6N39-A nrPDB Length = 415 Score = 26.3 bits (57), Expect = 9.1, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 15/31 (48%) Query: 1 MAHGPGALMLKCVVVGDGAVGKTCLLMSYAN 31 MAH ML+ + G GK+ L ++A Sbjct: 1 MAHHHHHHMLRIGLTGGIGAGKSALSSAFAQ 31 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.312 0.156 0.467 Lambda K H 0.267 0.0482 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9,327,434 Number of Sequences: 36641 Number of extensions: 419183 Number of successful extensions: 2753 Number of sequences better than 10.0: 438 Number of HSP's better than 10.0 without gapping: 454 Number of HSP's successfully gapped in prelim test: 138 Number of HSP's that attempted gapping in prelim test: 1697 Number of HSP's gapped (non-prelim): 650 length of query: 205 length of database: 10,336,785 effective HSP length: 92 effective length of query: 113 effective length of database: 6,965,813 effective search space: 787136869 effective search space used: 787136869 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 57 (26.3 bits)