BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q8NHV1 (300 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 3ZJC-A nrPDB 606 e-174 3LXX-A nrPDB 195 2e-50 3V70-A nrPDB 188 2e-48 2XTP-A nrPDB 184 3e-47 3P1J-A nrPDB 184 4e-47 1H65-A nrPDB 44 6e-05 3DEF-A nrPDB 42 3e-04 2WJG-A nrPDB 39 0.004 2WJI-A nrPDB 37 0.007 1WF3-A nrPDB 37 0.010 3FTQ-A nrPDB 37 0.015 2QAG-A nrPDB 36 0.021 3J8G-X nrPDB 35 0.032 4DCU-A nrPDB 35 0.041 3CNO-A nrPDB 34 0.078 5LAD-A nrPDB 33 0.10 3R9W-A nrPDB 33 0.12 5AR1-A nrPDB 33 0.17 1MKY-A nrPDB 33 0.18 1BH6-A nrPDB 32 0.23 5KH0-A nrPDB 32 0.29 5X4B-A nrPDB 31 0.50 2Q9B-A nrPDB 31 0.54 3K53-A nrPDB 31 0.72 1XZP-A nrPDB 30 0.87 1T24-A nrPDB 30 0.94 5CYO-A nrPDB 30 1.1 1SCN-E nrPDB 30 1.5 6HA8-V nrPDB 30 1.8 3IEU-A nrPDB 29 1.9 2G3Y-A nrPDB 29 2.0 1VMA-A nrPDB 29 2.1 2GZA-A nrPDB 29 2.3 6N39-A nrPDB 29 2.4 5DN8-A nrPDB 29 2.6 4LV5-B nrPDB 28 3.6 3DM5-A nrPDB 28 5.0 3GEE-A nrPDB 28 5.7 2CJW-A nrPDB 28 5.8 6FGZ-A nrPDB 28 5.9 2GJ9-A nrPDB 27 7.7 2C4M-A nrPDB 27 9.1 >3ZJC-A nrPDB Length = 305 Score = 606 bits (1563), Expect = e-174, Method: Compositional matrix adjust. Identities = 299/300 (99%), Positives = 299/300 (99%) Query: 1 MAESEDRSLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLL 60 MAESEDRSLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLL Sbjct: 6 MAESEDRSLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLL 65 Query: 61 VVDTPGLFDTKESLDTTCKEISRCIISSCPGPHAIVLVLLLGRYTEEEQKTVALIKAVFG 120 VVDTPGLFDTKESLDTTCKEISRCIISSCPGPHAIVLVL LGRYTEEEQKTVALIKAVFG Sbjct: 66 VVDTPGLFDTKESLDTTCKEISRCIISSCPGPHAIVLVLQLGRYTEEEQKTVALIKAVFG 125 Query: 121 KSAMKHMVILFTRKEELEGQSFHDFIADADVGLKSIVKECGNRCCAFSNSKKTSKAEKES 180 KSAMKHMVILFTRKEELEGQSFHDFIADADVGLKSIVKECGNRCCAFSNSKKTSKAEKES Sbjct: 126 KSAMKHMVILFTRKEELEGQSFHDFIADADVGLKSIVKECGNRCCAFSNSKKTSKAEKES 185 Query: 181 QVQELVELIEKMVQCNEGAYFSDDIYKDTEERLKQREEVLRKIYTDQLNEEIKLVEEDKH 240 QVQELVELIEKMVQCNEGAYFSDDIYKDTEERLKQREEVLRKIYTDQLNEEIKLVEEDKH Sbjct: 186 QVQELVELIEKMVQCNEGAYFSDDIYKDTEERLKQREEVLRKIYTDQLNEEIKLVEEDKH 245 Query: 241 KSEEEKEKEIKLLKLKYDEKIKNIREEAERNIFKDVFNRIWKMLSEIWHRFLSKCKFYSS 300 KSEEEKEKEIKLLKLKYDEKIKNIREEAERNIFKDVFNRIWKMLSEIWHRFLSKCKFYSS Sbjct: 246 KSEEEKEKEIKLLKLKYDEKIKNIREEAERNIFKDVFNRIWKMLSEIWHRFLSKCKFYSS 305 >3LXX-A nrPDB Length = 239 Score = 195 bits (496), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 94/218 (43%), Positives = 151/218 (69%), Gaps = 2/218 (0%) Query: 3 ESEDRSLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLLVV 62 E + LRIVLVGKTG+GKSAT N+ILG ++F S AA+++TK C+K S W+ +L+VV Sbjct: 24 EPRNSQLRIVLVGKTGAGKSATGNSILGRKVFHSGTAAKSITKKCEKRSSSWKETELVVV 83 Query: 63 DTPGLFDTKESLDTTCKEISRCIISSCPGPHAIVLVLLLGRYTEEEQKTVALIKAVFGKS 122 DTPG+FDT+ T KEI RCI+ + PGPHA++LV+ LGRYTEEE K I +FG+ Sbjct: 84 DTPGIFDTEVPNAETSKEIIRCILLTSPGPHALLLVVPLGRYTEEEHKATEKILKMFGER 143 Query: 123 AMKHMVILFTRKEELEGQSFHDFIADADVGLKSIVKECGNRCCAFSNSKKTSKAEKESQV 182 A M+++FTRK++L + HD++ +A ++ ++ G+R CA +N K + AE+E+Q Sbjct: 144 ARSFMILIFTRKDDLGDTNLHDYLREAPEDIQDLMDIFGDRYCALNN--KATGAEQEAQR 201 Query: 183 QELVELIEKMVQCNEGAYFSDDIYKDTEERLKQREEVL 220 +L+ LI+++V+ N+ +++ +Y+ EE ++++ + + Sbjct: 202 AQLLGLIQRVVRENKEGCYTNRMYQRAEEEIQKQTQAM 239 >3V70-A nrPDB Length = 247 Score = 188 bits (477), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 92/217 (42%), Positives = 147/217 (67%), Gaps = 5/217 (2%) Query: 10 RIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLLVVDTPGLFD 69 R++LVG+TG+GKSAT N+ILG+ F SR+ A +VT+ C SR W + VVDTP +F Sbjct: 23 RLILVGRTGAGKSATGNSILGQRRFFSRLGATSVTRACTTGSRRWDKCHVEVVDTPDIFS 82 Query: 70 TKES-LDTTCKEISRCIISSCPGPHAIVLVLLLGRYTEEEQKTVALIKAVFGKSAMKHMV 128 ++ S D C+E C + S PGPHA++LV LGR+T ++Q+ V ++ +FG+ +K MV Sbjct: 83 SQVSKTDPGCEERGHCYLLSAPGPHALLLVTQLGRFTAQDQQAVRQVRDMFGEDVLKWMV 142 Query: 129 ILFTRKEELEGQSFHDFIADA-DVGLKSIVKECGNRCCAFSNSKKTSKAEKESQVQELVE 187 I+FTRKE+L G S HD++++ + L+ +V ECG R CAF N + + E+E+QV +L+ Sbjct: 143 IVFTRKEDLAGGSLHDYVSNTENRALRELVAECGGRVCAFDN--RATGREQEAQVVQLLG 200 Query: 188 LIEKMVQCNEGAYFSDDIYKDTEE-RLKQREEVLRKI 223 ++E +V ++GA++S+++Y+ + R EE LR++ Sbjct: 201 MVEGLVLEHKGAHYSNEVYELAQVLRWAGPEERLRRV 237 >2XTP-A nrPDB Length = 260 Score = 184 bits (468), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 81/199 (40%), Positives = 132/199 (66%), Gaps = 3/199 (1%) Query: 9 LRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLLVVDTPGLF 68 LRI+LVGKTG+GKSA N+IL ++ F+S++ +Q +TK C K+ W R+++++DTP +F Sbjct: 23 LRIILVGKTGTGKSAAGNSILRKQAFESKLGSQTLTKTCSKSQGSWGNREIVIIDTPDMF 82 Query: 69 DTKESLDTTCKEISRCIISSCPGPHAIVLVLLLGRYTEEEQKTVALIKAVFGKSAMKHMV 128 K+ + KE+ RC + S PGPH ++LV LGRYT ++Q+ +K +FG+ AM H + Sbjct: 83 SWKDHCEALYKEVQRCYLLSAPGPHVLLLVTQLGRYTSQDQQAAQRVKEIFGEDAMGHTI 142 Query: 129 ILFTRKEELEGQSFHDFIADADV-GLKSIVKECGNRCCAFSNSKKTSKAEKESQVQELVE 187 +LFT KE+L G S D++ D+D L +V CG R CAF+N + + ++ QV+EL++ Sbjct: 143 VLFTHKEDLNGGSLMDYMHDSDNKALSKLVAACGGRICAFNN--RAEGSNQDDQVKELMD 200 Query: 188 LIEKMVQCNEGAYFSDDIY 206 IE ++ G ++++ +Y Sbjct: 201 CIEDLLMEKNGDHYTNGLY 219 >3P1J-A nrPDB Length = 209 Score = 184 bits (467), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 81/199 (40%), Positives = 132/199 (66%), Gaps = 3/199 (1%) Query: 9 LRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLLVVDTPGLF 68 LRI+LVGKTG+GKSA N+IL ++ F+S++ +Q +TK C K+ W R+++++DTP +F Sbjct: 6 LRIILVGKTGTGKSAAGNSILRKQAFESKLGSQTLTKTCSKSQGSWGNREIVIIDTPDMF 65 Query: 69 DTKESLDTTCKEISRCIISSCPGPHAIVLVLLLGRYTEEEQKTVALIKAVFGKSAMKHMV 128 K+ + KE+ RC + S PGPH ++LV LGRYT ++Q+ +K +FG+ AM H + Sbjct: 66 SWKDHCEALYKEVQRCYLLSAPGPHVLLLVTQLGRYTSQDQQAAQRVKEIFGEDAMGHTI 125 Query: 129 ILFTRKEELEGQSFHDFIADADV-GLKSIVKECGNRCCAFSNSKKTSKAEKESQVQELVE 187 +LFT KE+L G S D++ D+D L +V CG R CAF+N + + ++ QV+EL++ Sbjct: 126 VLFTHKEDLNGGSLMDYMHDSDNKALSKLVAACGGRICAFNN--RAEGSNQDDQVKELMD 183 Query: 188 LIEKMVQCNEGAYFSDDIY 206 IE ++ G ++++ +Y Sbjct: 184 CIEDLLMEKNGDHYTNGLY 202 >1H65-A nrPDB Length = 270 Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 51/199 (25%), Positives = 86/199 (43%), Gaps = 27/199 (13%) Query: 7 RSLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLLVVDTPG 66 SL I+++GK G GKS+T N+I+GE + S Q+ SR G L ++DTPG Sbjct: 38 NSLTILVMGKGGVGKSSTVNSIIGERVV-SISPFQSEGPRPVMVSRSRAGFTLNIIDTPG 96 Query: 67 LFDTKESLDTTCKEISRCIISSCPGPHAIVLVLLLGRY----TEEEQKTVA-LIKAVFGK 121 L + +++ II S I ++L + R + K VA I FGK Sbjct: 97 LIEGG-----YINDMALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGK 151 Query: 122 SAMKHMVILFTRKE--ELEGQSFHDFIADADVGLKSIVKECGNRCCAFSNSKKTSKAEKE 179 ++ T + +G + +F + L +V+ + +K+ Sbjct: 152 GIWNKAIVALTHAQFSPPDGLPYDEFFSKRSEALLQVVRSG-------------ASLKKD 198 Query: 180 SQVQEL-VELIEKMVQCNE 197 +Q ++ V LIE +CN+ Sbjct: 199 AQASDIPVVLIENSGRCNK 217 >3DEF-A nrPDB Length = 262 Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 38/61 (62%), Gaps = 3/61 (4%) Query: 8 SLRIVLVGKTGSGKSATANTILGEEIFDSRIAA-QAVTKNCQKASREWQGRDLLVVDTPG 66 S+ ++++GK G GKS+T N+++GE++ R++ QA SR G + ++DTPG Sbjct: 36 SMTVLVLGKGGVGKSSTVNSLIGEQVV--RVSPFQAEGLRPVMVSRTMGGFTINIIDTPG 93 Query: 67 L 67 L Sbjct: 94 L 94 >2WJG-A nrPDB Length = 188 Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust. Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 3/73 (4%) Query: 4 SEDRSLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLLVVD 63 S +S I L+G GKS N + GE ++ V K ++ E+ G VVD Sbjct: 3 SHMKSYEIALIGNPNVGKSTIFNALTGENVYIGNWPGVTVEK--KEGEFEYNGEKFKVVD 60 Query: 64 TPGLFD-TKESLD 75 PG++ T S+D Sbjct: 61 LPGVYSLTANSID 73 >2WJI-A nrPDB Length = 165 Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust. Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 3/70 (4%) Query: 7 RSLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLLVVDTPG 66 +S I L+G GKS N + GE ++ V K ++ E+ G VVD PG Sbjct: 2 KSYEIALIGNPNVGKSTIFNALTGENVYIGNWPGVTVEK--KEGEFEYNGEKFKVVDLPG 59 Query: 67 LFD-TKESLD 75 ++ T S+D Sbjct: 60 VYSLTANSID 69 >1WF3-A nrPDB Length = 301 Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust. Identities = 51/228 (22%), Positives = 96/228 (42%), Gaps = 45/228 (19%) Query: 11 IVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLLVVDTPGLFDT 70 + +VGK GKS N +LG ++ Q K + E + R ++ VDTPGL Sbjct: 10 VAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGR-RQIVFVDTPGL--- 65 Query: 71 KESLDTTCKEISRCIISSCPGPHAIVLVLLLGRYTEEEQKTVA-LIKAVFGKSAMKHMVI 129 + +D + + + + + +A+V V+ L E + VA +K + GK ++ Sbjct: 66 HKPMDALGEFMDQEVYEALADVNAVVWVVDLRHPPTPEDELVARALKPLVGKVP----IL 121 Query: 130 LFTRK------EELEGQSFHDFIADADVGLKSIVKECGNRCCAFSNSKKTSKAEKESQVQ 183 L K E +++H+ + +A+ + S A E QV Sbjct: 122 LVGNKLDAAKYPEEAMKAYHELLPEAEPRMLS--------------------ALDERQVA 161 Query: 184 EL-VELIEKMVQCNEGAYFSDDIYKDTEERLKQ------REEVLRKIY 224 EL +L+ M EG +F + Y +++ + REE +++++ Sbjct: 162 ELKADLLALM---PEGPFFYPEDYAKSDQTFGEWVAEILREEAMKRLW 206 >3FTQ-A nrPDB Length = 274 Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 14/86 (16%) Query: 11 IVLVGKTGSGKSATANTILGEEIFDSRI---AAQAVTKNCQ--KASREWQGRD----LLV 61 +++VG++G GKS N++ +++ RI AA+ + + Q ++ E + R L V Sbjct: 8 LMVVGESGLGKSTLINSLFLTDLYPERIIPGAAEKIERTVQIEASTVEIEERGVKLRLTV 67 Query: 62 VDTPGLFDTKESLDTTCKEISRCIIS 87 VDTPG D C++ + IIS Sbjct: 68 VDTPGYGDA-----INCRDCFKTIIS 88 >2QAG-A nrPDB Length = 361 Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust. Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 14/86 (16%) Query: 11 IVLVGKTGSGKSATANTILGEEIFDSRI---AAQAVTKNCQ--KASREWQGRD----LLV 61 +++VG++G GKS N++ +++ R+ AA+ + + Q ++ E + R L V Sbjct: 40 LMVVGESGLGKSTLINSLFLTDLYPERVIPGAAEKIERTVQIEASTVEIEERGVKLRLTV 99 Query: 62 VDTPGLFDTKESLDTTCKEISRCIIS 87 VDTPG D C++ + IIS Sbjct: 100 VDTPGYGDA-----INCRDCFKTIIS 120 >3J8G-X nrPDB Length = 490 Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust. Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 7/68 (10%) Query: 3 ESEDRSLRIVLVGKTGSGKSATANTILGEE---IFDSRIAAQAVTKNCQKASREWQGRDL 59 + + +++ +VG+ GKS N ILGEE ++D T++ E GR+ Sbjct: 197 DPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYD----MPGTTRDSIYIPMERDGREY 252 Query: 60 LVVDTPGL 67 +++DT G+ Sbjct: 253 VLIDTAGV 260 Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust. Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 3/77 (3%) Query: 11 IVLVGKTGSGKSATANTILGEEIFDSRIAA-QAVTKNCQKASREWQGRDLLVVDTPGLFD 69 + LVG+ GKS N + D+ +A +T++ + E +GR+ + +DT G+ Sbjct: 5 VALVGRPNVGKSTLFNRL--TRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGIDG 62 Query: 70 TKESLDTTCKEISRCII 86 T++ ++T E S I Sbjct: 63 TEDGVETRMAEQSLLAI 79 >4DCU-A nrPDB Length = 456 Score = 35.0 bits (79), Expect = 0.041, Method: Compositional matrix adjust. Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 3/68 (4%) Query: 13 LVGKTGSGKSATANTILGEE-IFDSRIAAQAVTKNCQKASREWQGRDLLVVDTPGLFDTK 71 L+G+ GKS+ N +LGEE + S +A T++ S + ++ ++VDT G+ Sbjct: 200 LIGRPNVGKSSLVNAMLGEERVIVSNVA--GTTRDAVDTSFTYNQQEFVIVDTAGMRKKG 257 Query: 72 ESLDTTCK 79 + +TT K Sbjct: 258 KVYETTEK 265 Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 3/58 (5%) Query: 11 IVLVGKTGSGKSATANTILGEEIFDSRIA-AQAVTKNCQKASREWQGRDLLVVDTPGL 67 + +VG+ GKS N I GE I S + VT++ +S EW D ++DT G+ Sbjct: 26 VAIVGRPNVGKSTIFNRIAGERI--SIVEDTPGVTRDRIYSSAEWLNYDFNLIDTGGI 81 >3CNO-A nrPDB Length = 262 Score = 33.9 bits (76), Expect = 0.078, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 10/89 (11%) Query: 4 SEDRSLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQ-AVTKNCQKASREWQGRDLLVV 62 S DR R+++VG +GKS N + G+ S + AQ +TK Q S E + ++ Sbjct: 95 SFDRLARVLIVGVPNTGKSTIINKLKGKR--ASSVGAQPGITKGIQWFSLE---NGVKIL 149 Query: 63 DTPG-LFDTKESLDTTCKEISRCIISSCP 90 DTPG L+ S D K + ++ S P Sbjct: 150 DTPGILYKNIFSEDLAAKLL---LVGSLP 175 >5LAD-A nrPDB Length = 404 Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust. Identities = 19/62 (30%), Positives = 30/62 (48%) Query: 11 IVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLLVVDTPGLFDT 70 IV+ G+ GKS+ N ++G+ + A T K+ + + +VDTPGL D Sbjct: 12 IVVAGRRNVGKSSFMNALVGQNVSIVSEYAGTTTDPVYKSMELYPVGPVTLVDTPGLDDV 71 Query: 71 KE 72 E Sbjct: 72 GE 73 >3R9W-A nrPDB Length = 307 Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 12/80 (15%) Query: 11 IVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTK-----NCQKASREWQGRDLLVVDTP 65 + +VGK GKS N +LG ++ S I+ +A T + E Q ++ +DTP Sbjct: 12 VAIVGKPNVGKSTLLNNLLGTKV--SIISPKAGTTRMRVLGVKNIPNEAQ---IIFLDTP 66 Query: 66 GLFDTKES--LDTTCKEISR 83 G+++ K+S L + EI++ Sbjct: 67 GIYEPKKSDVLGHSMVEIAK 86 >5AR1-A nrPDB Length = 303 Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust. Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 12/78 (15%) Query: 8 SLRIVLVGKTGSGKSATANTILGEEIFDSR------------IAAQAVTKNCQKASREWQ 55 + +++VG++GSG+S NT+ G+++ D+ I Q + + E Sbjct: 27 TFTVMIVGQSGSGRSTFINTLCGQQVVDTSTTILLPTDTSTEIDLQLREETVELEDDEGV 86 Query: 56 GRDLLVVDTPGLFDTKES 73 L ++DTPG D+ ++ Sbjct: 87 KIQLNIIDTPGFGDSLDN 104 >1MKY-A nrPDB Length = 439 Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust. Identities = 18/66 (27%), Positives = 37/66 (56%), Gaps = 5/66 (7%) Query: 11 IVLVGKTGSGKSATANTILGEE--IFDSRIAAQAVTKNCQKASREWQGRDLLVVDTPGLF 68 +++VG+ GKS N ++ ++ I + + VT++ + + EW G+ +VDT G+F Sbjct: 4 VLIVGRPNVGKSTLFNKLVKKKKAIVEDE---EGVTRDPVQDTVEWYGKTFKLVDTCGVF 60 Query: 69 DTKESL 74 D + + Sbjct: 61 DNPQDI 66 >1BH6-A nrPDB Length = 274 Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust. Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 6/96 (6%) Query: 11 IVLVGKTG-SGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLLVVDTPGLFD 69 IV+V G SG S + NTI +DS IA AV N +AS G +L V+ PG+ Sbjct: 146 IVVVAAAGNSGNSGSQNTIGYPAKYDSVIAVGAVDSNKNRASFSSVGSELEVM-APGVSV 204 Query: 70 TKESLDTTCKEISRCIISSCPGPH-AIVLVLLLGRY 104 T ++ ++S PH A L+L +Y Sbjct: 205 YSTYPSNTYTSLNGTSMAS---PHVAGAAALILSKY 237 >5KH0-A nrPDB Length = 396 Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust. Identities = 18/62 (29%), Positives = 29/62 (46%) Query: 11 IVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLLVVDTPGLFDT 70 I + G+ GKS+ N ++G+E+ A T K+ + ++DTPGL D Sbjct: 11 IAITGRRNVGKSSFMNALIGQEVSIVSNVAGTTTDPVFKSMELSPVGPITLIDTPGLDDV 70 Query: 71 KE 72 E Sbjct: 71 GE 72 >5X4B-A nrPDB Length = 162 Score = 31.2 bits (69), Expect = 0.50, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 3/58 (5%) Query: 11 IVLVGKTGSGKSATANTILGEEIFDSRIA-AQAVTKNCQKASREWQGRDLLVVDTPGL 67 + +VG+ GKS N I GE I S + VT++ +S EW D ++DT G+ Sbjct: 5 VAIVGRPNVGKSTIFNRIAGERI--SIVEDTPGVTRDRIYSSAEWLNYDFNLIDTGGI 60 >2Q9B-A nrPDB Length = 304 Score = 31.2 bits (69), Expect = 0.54, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 39/82 (47%), Gaps = 8/82 (9%) Query: 20 GKSATANTILGEEIFD-SRIAAQAVTKNCQKASREWQGRDLLVVDTPGLFDTKESLDTTC 78 GK + I G E D + +A AV KA +G DLL VDT G TK +L Sbjct: 153 GKRLSIPVIQGPEGTDPAALAYDAV--QAMKA----RGYDLLFVDTAGRLHTKHNLMEEL 206 Query: 79 KEISRCIISSCP-GPHAIVLVL 99 K++ R I + P P + LVL Sbjct: 207 KKVKRAIAKADPEEPKEVWLVL 228 >3K53-A nrPDB Length = 271 Score = 30.8 bits (68), Expect = 0.72, Method: Compositional matrix adjust. Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 5/67 (7%) Query: 11 IVLVGKTGSGKSATANTILGEEIFDSRIAA-QAVTKNCQKASREWQGRDLLVVDTPGLFD 69 + LVG GK+ N + G + VT ++ E++ ++ LVVD PG++ Sbjct: 6 VALVGNPNVGKTTIFNALTG---LRQHVGNWPGVTVEKKEGIMEYREKEFLVVDLPGIYS 62 Query: 70 -TKESLD 75 T S+D Sbjct: 63 LTAHSID 69 >1XZP-A nrPDB Length = 482 Score = 30.4 bits (67), Expect = 0.87, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 5/64 (7%) Query: 6 DRSLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLL--VVD 63 +R LR+V+VGK GKS N +L E D I S E R +L +VD Sbjct: 241 NRGLRMVIVGKPNVGKSTLLNRLLNE---DRAIVTDIPGTTRDVISEEIVIRGILFRIVD 297 Query: 64 TPGL 67 T G+ Sbjct: 298 TAGV 301 >1T24-A nrPDB Length = 322 Score = 30.4 bits (67), Expect = 0.94, Method: Compositional matrix adjust. Identities = 45/230 (19%), Positives = 85/230 (36%), Gaps = 39/230 (16%) Query: 35 DSRIAAQAVTKNCQKASREWQGRDLLVVDTPGLFDTKESLDTTCKEISRCIISSCPGPHA 94 D I TK K+ +EW DLL ++ + + + C + I+ + P Sbjct: 74 DVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPN-AFIIVVTNP---V 129 Query: 95 IVLVLLLGRYTEEEQKTVALIKAVFGKSAMKHMV-----------------------ILF 131 V+V LL +++ + + + V S +K+ + +L Sbjct: 130 DVMVQLLHQHSGVPKNKIIGLGGVLDTSRLKYYISQKLNVCPRDVNAHIVGAHGNKMVLL 189 Query: 132 TRKEELEGQSFHDFIAD---ADVGLKSIVKECGNRCCAFSNSKKTSKAEKESQVQELVEL 188 R + G +FI + +D L++I N N + + + E+ E Sbjct: 190 KRYITVGGIPLQEFINNKLISDAELEAIFDRTVNTALEIVNLHASPYVAPAAAIIEMAES 249 Query: 189 ----IEKMVQCN---EGAYFSDDIYKDTEERLKQREEVLRKIYTDQLNEE 231 ++K++ C+ EG Y DI+ T L + ++ QLN E Sbjct: 250 YLKDLKKVLICSTLLEGQYGHSDIFGGTPVVLGANG--VEQVIELQLNSE 297 >5CYO-A nrPDB Length = 274 Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust. Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 15/73 (20%) Query: 9 LRIVLVGKTGSGKSATANTIL------------GEEIFDSRIAAQAVTKNCQKASREWQG 56 I++VG++G GKS NT+ EE I +++T + ++ + Sbjct: 5 FNIMVVGQSGLGKSTLINTLFKSKISRKSVQPTSEERIPKTIEIKSITHDIEEKGVRMK- 63 Query: 57 RDLLVVDTPGLFD 69 L V+DTPG D Sbjct: 64 --LTVIDTPGFGD 74 >1SCN-E nrPDB Length = 276 Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 9/85 (10%) Query: 19 SGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDL-LVVDTPGLFDTKESLDTT 77 SG S + NTI +DS IA AV N +AS G +L ++ G++ T + T Sbjct: 155 SGNSGSTNTIGYPAKYDSVIAVGAVDSNSNRASFSSVGAELEVMAPGAGVYSTYPT--NT 212 Query: 78 CKEISRCIISSCPGPH---AIVLVL 99 ++ ++S PH A L+L Sbjct: 213 YATLNGTSMAS---PHVAGAAALIL 234 >6HA8-V nrPDB Length = 548 Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust. Identities = 10/29 (34%), Positives = 18/29 (62%) Query: 10 RIVLVGKTGSGKSATANTILGEEIFDSRI 38 ++ ++G GSGK+ N ILG+E + + Sbjct: 325 KVAIIGPNGSGKTTLLNIILGQETAEGSV 353 >3IEU-A nrPDB Length = 301 Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 11 IVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLLVVDTPGL 67 I +VG+ GKS N +LG++I + AQ E + VDTPGL Sbjct: 11 IAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTE-GAYQAIYVDTPGL 66 >2G3Y-A nrPDB Length = 211 Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust. Identities = 13/29 (44%), Positives = 18/29 (62%) Query: 2 AESEDRSLRIVLVGKTGSGKSATANTILG 30 +ES + R+VL+G+ G GKS AN G Sbjct: 31 SESGNTYYRVVLIGEQGVGKSTLANIFAG 59 >1VMA-A nrPDB Length = 306 Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust. Identities = 13/44 (29%), Positives = 26/44 (59%), Gaps = 1/44 (2%) Query: 57 RDLLVVDTPGLFDTKESLDTTCKEISRCIISSCP-GPHAIVLVL 99 +D++++DT G TK++L +++ R + P PH +LV+ Sbjct: 187 KDVVIIDTAGRLHTKKNLMEELRKVHRVVKKKIPDAPHETLLVI 230 >2GZA-A nrPDB Length = 361 Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust. Identities = 12/28 (42%), Positives = 18/28 (64%) Query: 11 IVLVGKTGSGKSATANTILGEEIFDSRI 38 IV+ G+TGSGK+ ++ E FD R+ Sbjct: 178 IVVAGETGSGKTTLMKALMQEIPFDQRL 205 >6N39-A nrPDB Length = 415 Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 5/60 (8%) Query: 9 LRIVLVGKTGSGKSATANTIL--GEEIFDSRIAAQAVTKNCQK---ASREWQGRDLLVVD 63 LRI L G G+GKSA ++ G I D + A+ V + + A E GRD+L+ D Sbjct: 10 LRIGLTGGIGAGKSALSSAFAQCGAVIVDGDVIAREVVRPGTEGLAALVEAFGRDILLAD 69 >5DN8-A nrPDB Length = 446 Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 9/64 (14%) Query: 11 IVLVGKTGSGKSATANTILGEEIFDSRIAAQA----VTKNCQKASREWQGRDLLVVDTPG 66 I +VG+ GKS N + SR A A VT++ Q + LL+VDT G Sbjct: 8 IAIVGRPNVGKSTLFNYLT-----KSRAALVADVPGVTRDRQYGETTIDSQRLLLVDTGG 62 Query: 67 LFDT 70 L DT Sbjct: 63 LVDT 66 >4LV5-B nrPDB Length = 423 Score = 28.5 bits (62), Expect = 3.6, Method: Compositional matrix adjust. Identities = 12/30 (40%), Positives = 19/30 (63%) Query: 1 MAESEDRSLRIVLVGKTGSGKSATANTILG 30 + E + L + + G+TGSGKS+ NT+ G Sbjct: 72 LKEIDSSVLNVAVTGETGSGKSSFINTLRG 101 >3DM5-A nrPDB Length = 443 Score = 28.1 bits (61), Expect = 5.0, Method: Compositional matrix adjust. Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 5/45 (11%) Query: 55 QGRDLLVVDTPGLFDTKESLDTTCKEISRCIISSCPGPHAIVLVL 99 +G D+++VDT G ++L K+IS I PH ++LV+ Sbjct: 181 KGVDIIIVDTAGRHKEDKALIEEMKQISNVI-----HPHEVILVI 220 >3GEE-A nrPDB Length = 476 Score = 27.7 bits (60), Expect = 5.7, Method: Compositional matrix adjust. Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 8/43 (18%) Query: 12 VLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREW 54 V+ GK +GKS NT+LG+E +A+ + +R++ Sbjct: 237 VIAGKPNAGKSTLLNTLLGQE--------RAIVSHMPGTTRDY 271 >2CJW-A nrPDB Length = 192 Score = 27.7 bits (60), Expect = 5.8, Method: Compositional matrix adjust. Identities = 11/21 (52%), Positives = 14/21 (66%) Query: 10 RIVLVGKTGSGKSATANTILG 30 R+VL+G+ G GKS AN G Sbjct: 8 RVVLIGEQGVGKSTLANIFAG 28 >6FGZ-A nrPDB Length = 774 Score = 27.7 bits (60), Expect = 5.9, Method: Compositional matrix adjust. Identities = 11/25 (44%), Positives = 17/25 (68%) Query: 10 RIVLVGKTGSGKSATANTILGEEIF 34 +I++VG SGKS+ ++GE IF Sbjct: 28 QIMVVGAQSSGKSSVLENVVGESIF 52 >2GJ9-A nrPDB Length = 172 Score = 27.3 bits (59), Expect = 7.7, Method: Compositional matrix adjust. Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 3/61 (4%) Query: 8 SLRIVLVGKTGSGKSATANTILGEE-IFDSRIAAQAVTKNCQKASREWQGRDLLVVDTPG 66 +++V+ G+ +GKS+ N + G E + IA T++ + G L ++DT G Sbjct: 4 GMKVVIAGRPNAGKSSLLNALAGREAAIVTDIA--GTTRDVLREHIHIDGMPLHIIDTAG 61 Query: 67 L 67 L Sbjct: 62 L 62 >2C4M-A nrPDB Length = 796 Score = 27.3 bits (59), Expect = 9.1, Method: Compositional matrix adjust. Identities = 10/26 (38%), Positives = 19/26 (73%) Query: 266 EEAERNIFKDVFNRIWKMLSEIWHRF 291 E+ + IF+ +F R+W++++EI RF Sbjct: 343 EQWDEQIFQQLFWRVWEIIAEIDRRF 368 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 3ZJC-A nrPDB 454 e-128 3V70-A nrPDB 291 3e-79 3LXX-A nrPDB 283 6e-77 3P1J-A nrPDB 275 1e-74 2XTP-A nrPDB 274 3e-74 1H65-A nrPDB 186 1e-47 3DEF-A nrPDB 127 7e-30 Sequences not found previously or not previously below threshold: 1MKY-A nrPDB 41 6e-04 4DCU-A nrPDB 40 9e-04 3J8G-X nrPDB 39 0.002 1WF3-A nrPDB 39 0.002 5X4B-A nrPDB 39 0.003 3IEU-A nrPDB 38 0.004 3R9W-A nrPDB 37 0.008 5AR1-A nrPDB 37 0.013 3A1W-A nrPDB 35 0.028 3A1U-A nrPDB 34 0.066 2WJI-A nrPDB 34 0.067 2WJG-A nrPDB 34 0.067 5KCS-1w nrPDB 34 0.068 3CNO-A nrPDB 34 0.099 3GEH-A nrPDB 33 0.15 5KH0-A nrPDB 33 0.16 5DN8-A nrPDB 33 0.21 5CYO-A nrPDB 33 0.22 3KZ4-A nrPDB 32 0.37 2GJ9-A nrPDB 32 0.40 6G12-A nrPDB 32 0.46 6OJ5-A nrPDB 32 0.48 4R98-A nrPDB 31 0.56 5XC3-A nrPDB 31 0.58 1IBW-B nrPDB 31 0.61 3K53-A nrPDB 31 0.63 1PUJ-A nrPDB 31 0.64 3FTQ-A nrPDB 31 0.71 4Z54-A nrPDB 31 0.80 2QAG-A nrPDB 31 0.83 1XZP-A nrPDB 30 0.93 4LV5-B nrPDB 30 0.95 5T62-W nrPDB 30 1.3 2OCB-A nrPDB 30 1.5 2AKY-A nrPDB 30 1.5 6N8N-W nrPDB 30 1.6 3GEE-A nrPDB 30 1.8 4M8N-E nrPDB 29 2.0 6FGZ-A nrPDB 29 2.1 2C4M-A nrPDB 29 2.2 2AKJ-A nrPDB 29 2.4 3PE0-A nrPDB 29 2.6 5NLY-A nrPDB 29 2.6 2P4W-A nrPDB 29 2.7 3QWM-A nrPDB 29 2.8 5NO4-Z nrPDB 29 3.0 2DYK-A nrPDB 29 3.1 5ZWO-w nrPDB 29 3.3 1SUL-A nrPDB 29 3.3 4LMB-A nrPDB 29 3.3 2QTH-A nrPDB 29 3.4 5OWV-A nrPDB 29 3.5 2H34-A nrPDB 29 3.7 1ZC4-A nrPDB 29 3.8 4QXA-A nrPDB 28 4.2 2G3Y-A nrPDB 28 4.4 2KE5-A nrPDB 28 4.9 5IDV-A nrPDB 28 5.1 2YKR-W nrPDB 28 5.1 2PC6-A nrPDB 28 5.2 1T6M-A nrPDB 28 5.9 4E4G-A nrPDB 28 5.9 5XOJ-A nrPDB 28 6.2 3WYF-A nrPDB 28 6.2 2J4X-A nrPDB 28 6.2 5KUT-A nrPDB 28 6.4 1HEY-A nrPDB 28 6.8 4M9Q-A nrPDB 28 7.0 1CP2-A nrPDB 28 7.0 5YOZ-A nrPDB 28 7.0 1I33-A nrPDB 27 7.5 5VH6-A nrPDB 27 7.8 5DI3-B nrPDB 27 8.3 2J1L-A nrPDB 27 8.7 >3ZJC-A nrPDB Length = 305 Score = 454 bits (1169), Expect = e-128, Method: Composition-based stats. Identities = 299/300 (99%), Positives = 299/300 (99%) Query: 1 MAESEDRSLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLL 60 MAESEDRSLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLL Sbjct: 6 MAESEDRSLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLL 65 Query: 61 VVDTPGLFDTKESLDTTCKEISRCIISSCPGPHAIVLVLLLGRYTEEEQKTVALIKAVFG 120 VVDTPGLFDTKESLDTTCKEISRCIISSCPGPHAIVLVL LGRYTEEEQKTVALIKAVFG Sbjct: 66 VVDTPGLFDTKESLDTTCKEISRCIISSCPGPHAIVLVLQLGRYTEEEQKTVALIKAVFG 125 Query: 121 KSAMKHMVILFTRKEELEGQSFHDFIADADVGLKSIVKECGNRCCAFSNSKKTSKAEKES 180 KSAMKHMVILFTRKEELEGQSFHDFIADADVGLKSIVKECGNRCCAFSNSKKTSKAEKES Sbjct: 126 KSAMKHMVILFTRKEELEGQSFHDFIADADVGLKSIVKECGNRCCAFSNSKKTSKAEKES 185 Query: 181 QVQELVELIEKMVQCNEGAYFSDDIYKDTEERLKQREEVLRKIYTDQLNEEIKLVEEDKH 240 QVQELVELIEKMVQCNEGAYFSDDIYKDTEERLKQREEVLRKIYTDQLNEEIKLVEEDKH Sbjct: 186 QVQELVELIEKMVQCNEGAYFSDDIYKDTEERLKQREEVLRKIYTDQLNEEIKLVEEDKH 245 Query: 241 KSEEEKEKEIKLLKLKYDEKIKNIREEAERNIFKDVFNRIWKMLSEIWHRFLSKCKFYSS 300 KSEEEKEKEIKLLKLKYDEKIKNIREEAERNIFKDVFNRIWKMLSEIWHRFLSKCKFYSS Sbjct: 246 KSEEEKEKEIKLLKLKYDEKIKNIREEAERNIFKDVFNRIWKMLSEIWHRFLSKCKFYSS 305 >3V70-A nrPDB Length = 247 Score = 291 bits (744), Expect = 3e-79, Method: Composition-based stats. Identities = 92/221 (41%), Positives = 149/221 (67%), Gaps = 5/221 (2%) Query: 6 DRSLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLLVVDTP 65 + + R++LVG+TG+GKSAT N+ILG+ F SR+ A +VT+ C SR W + VVDTP Sbjct: 19 ESTRRLILVGRTGAGKSATGNSILGQRRFFSRLGATSVTRACTTGSRRWDKCHVEVVDTP 78 Query: 66 GLFDTKES-LDTTCKEISRCIISSCPGPHAIVLVLLLGRYTEEEQKTVALIKAVFGKSAM 124 +F ++ S D C+E C + S PGPHA++LV LGR+T ++Q+ V ++ +FG+ + Sbjct: 79 DIFSSQVSKTDPGCEERGHCYLLSAPGPHALLLVTQLGRFTAQDQQAVRQVRDMFGEDVL 138 Query: 125 KHMVILFTRKEELEGQSFHDFIADA-DVGLKSIVKECGNRCCAFSNSKKTSKAEKESQVQ 183 K MVI+FTRKE+L G S HD++++ + L+ +V ECG R CAF N + + E+E+QV Sbjct: 139 KWMVIVFTRKEDLAGGSLHDYVSNTENRALRELVAECGGRVCAFDN--RATGREQEAQVV 196 Query: 184 ELVELIEKMVQCNEGAYFSDDIYKDTEE-RLKQREEVLRKI 223 +L+ ++E +V ++GA++S+++Y+ + R EE LR++ Sbjct: 197 QLLGMVEGLVLEHKGAHYSNEVYELAQVLRWAGPEERLRRV 237 >3LXX-A nrPDB Length = 239 Score = 283 bits (724), Expect = 6e-77, Method: Composition-based stats. Identities = 94/218 (43%), Positives = 151/218 (69%), Gaps = 2/218 (0%) Query: 3 ESEDRSLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLLVV 62 E + LRIVLVGKTG+GKSAT N+ILG ++F S AA+++TK C+K S W+ +L+VV Sbjct: 24 EPRNSQLRIVLVGKTGAGKSATGNSILGRKVFHSGTAAKSITKKCEKRSSSWKETELVVV 83 Query: 63 DTPGLFDTKESLDTTCKEISRCIISSCPGPHAIVLVLLLGRYTEEEQKTVALIKAVFGKS 122 DTPG+FDT+ T KEI RCI+ + PGPHA++LV+ LGRYTEEE K I +FG+ Sbjct: 84 DTPGIFDTEVPNAETSKEIIRCILLTSPGPHALLLVVPLGRYTEEEHKATEKILKMFGER 143 Query: 123 AMKHMVILFTRKEELEGQSFHDFIADADVGLKSIVKECGNRCCAFSNSKKTSKAEKESQV 182 A M+++FTRK++L + HD++ +A ++ ++ G+R CA +N K + AE+E+Q Sbjct: 144 ARSFMILIFTRKDDLGDTNLHDYLREAPEDIQDLMDIFGDRYCALNN--KATGAEQEAQR 201 Query: 183 QELVELIEKMVQCNEGAYFSDDIYKDTEERLKQREEVL 220 +L+ LI+++V+ N+ +++ +Y+ EE ++++ + + Sbjct: 202 AQLLGLIQRVVRENKEGCYTNRMYQRAEEEIQKQTQAM 239 >3P1J-A nrPDB Length = 209 Score = 275 bits (704), Expect = 1e-74, Method: Composition-based stats. Identities = 81/205 (39%), Positives = 133/205 (64%), Gaps = 3/205 (1%) Query: 7 RSLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLLVVDTPG 66 LRI+LVGKTG+GKSA N+IL ++ F+S++ +Q +TK C K+ W R+++++DTP Sbjct: 4 SELRIILVGKTGTGKSAAGNSILRKQAFESKLGSQTLTKTCSKSQGSWGNREIVIIDTPD 63 Query: 67 LFDTKESLDTTCKEISRCIISSCPGPHAIVLVLLLGRYTEEEQKTVALIKAVFGKSAMKH 126 +F K+ + KE+ RC + S PGPH ++LV LGRYT ++Q+ +K +FG+ AM H Sbjct: 64 MFSWKDHCEALYKEVQRCYLLSAPGPHVLLLVTQLGRYTSQDQQAAQRVKEIFGEDAMGH 123 Query: 127 MVILFTRKEELEGQSFHDFIADADV-GLKSIVKECGNRCCAFSNSKKTSKAEKESQVQEL 185 ++LFT KE+L G S D++ D+D L +V CG R CAF+N + + ++ QV+EL Sbjct: 124 TIVLFTHKEDLNGGSLMDYMHDSDNKALSKLVAACGGRICAFNN--RAEGSNQDDQVKEL 181 Query: 186 VELIEKMVQCNEGAYFSDDIYKDTE 210 ++ IE ++ G ++++ +Y + Sbjct: 182 MDCIEDLLMEKNGDHYTNGLYSLIQ 206 >2XTP-A nrPDB Length = 260 Score = 274 bits (701), Expect = 3e-74, Method: Composition-based stats. Identities = 81/211 (38%), Positives = 133/211 (63%), Gaps = 3/211 (1%) Query: 7 RSLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLLVVDTPG 66 LRI+LVGKTG+GKSA N+IL ++ F+S++ +Q +TK C K+ W R+++++DTP Sbjct: 21 SELRIILVGKTGTGKSAAGNSILRKQAFESKLGSQTLTKTCSKSQGSWGNREIVIIDTPD 80 Query: 67 LFDTKESLDTTCKEISRCIISSCPGPHAIVLVLLLGRYTEEEQKTVALIKAVFGKSAMKH 126 +F K+ + KE+ RC + S PGPH ++LV LGRYT ++Q+ +K +FG+ AM H Sbjct: 81 MFSWKDHCEALYKEVQRCYLLSAPGPHVLLLVTQLGRYTSQDQQAAQRVKEIFGEDAMGH 140 Query: 127 MVILFTRKEELEGQSFHDFIADADV-GLKSIVKECGNRCCAFSNSKKTSKAEKESQVQEL 185 ++LFT KE+L G S D++ D+D L +V CG R CAF+N + + ++ QV+EL Sbjct: 141 TIVLFTHKEDLNGGSLMDYMHDSDNKALSKLVAACGGRICAFNN--RAEGSNQDDQVKEL 198 Query: 186 VELIEKMVQCNEGAYFSDDIYKDTEERLKQR 216 ++ IE ++ G ++++ +Y + Sbjct: 199 MDCIEDLLMEKNGDHYTNGLYSLIQRSKCGP 229 >1H65-A nrPDB Length = 270 Score = 186 bits (472), Expect = 1e-47, Method: Composition-based stats. Identities = 51/207 (24%), Positives = 89/207 (42%), Gaps = 27/207 (13%) Query: 1 MAESEDRSLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLL 60 + + + SL I+++GK G GKS+T N+I+GE + S Q+ SR G L Sbjct: 32 LKQEDVNSLTILVMGKGGVGKSSTVNSIIGERVV-SISPFQSEGPRPVMVSRSRAGFTLN 90 Query: 61 VVDTPGLFDTKESLDTTCKEISRCIISSCPGPHAIVLVLLLGRY----TEEEQKTVAL-I 115 ++DTPGL + +++ II S I ++L + R + K VA I Sbjct: 91 IIDTPGLIEGG-----YINDMALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAI 145 Query: 116 KAVFGKSAMKHMVILFTRKE--ELEGQSFHDFIADADVGLKSIVKECGNRCCAFSNSKKT 173 FGK ++ T + +G + +F + L +V+ Sbjct: 146 TDSFGKGIWNKAIVALTHAQFSPPDGLPYDEFFSKRSEALLQVVRSG------------- 192 Query: 174 SKAEKESQVQEL-VELIEKMVQCNEGA 199 + +K++Q ++ V LIE +CN+ Sbjct: 193 ASLKKDAQASDIPVVLIENSGRCNKND 219 >3DEF-A nrPDB Length = 262 Score = 127 bits (318), Expect = 7e-30, Method: Composition-based stats. Identities = 42/206 (20%), Positives = 81/206 (39%), Gaps = 24/206 (11%) Query: 1 MAESEDRSLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLL 60 + + + S+ ++++GK G GKS+T N+++GE++ QA SR G + Sbjct: 29 LKQKDMNSMTVLVLGKGGVGKSSTVNSLIGEQVVR-VSPFQAEGLRPVMVSRTMGGFTIN 87 Query: 61 VVDTPGLFDTKESLDTTCKEISRCIISSCPGPHAIVLVLLLGRY-----TEEEQKTVALI 115 ++DTPGL + + +I I ++L + R E +++ V I Sbjct: 88 IIDTPGLVEAG-----YVNHQALELIKGFLVNRTIDVLLYVDRLDVYAVDELDKQVVIAI 142 Query: 116 KAVFGKSAMKHMVILFTRKE--ELEGQSFHDFIADADVGLKSIVKECGNRCCAFSNSKKT 173 FGK +++ T + + S+ F + L ++ K Sbjct: 143 TQTFGKEIWCKTLLVLTHAQFSPPDELSYETFSSKRSDSLLKTIRAG----------SKM 192 Query: 174 SKAEKESQVQELVELIEKMVQCNEGA 199 K E E +V E +C++ Sbjct: 193 RKQEFEDSAIAVV-YAENSGRCSKND 217 >1MKY-A nrPDB Length = 439 Score = 41.2 bits (95), Expect = 6e-04, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 52/110 (47%), Gaps = 4/110 (3%) Query: 10 RIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLLVVDTPGLFD 69 +++VG+ GKS N ++ ++ + VT++ + + EW G+ +VDT G+FD Sbjct: 3 TVLIVGRPNVGKSTLFNKLVKKKKAIVE-DEEGVTRDPVQDTVEWYGKTFKLVDTCGVFD 61 Query: 70 T-KESLDTTCKEISRCIISSCPGPHAIVLVLLLGRYTEEEQKTVALIKAV 118 ++ + KE++ +I + +V T+E++ ++ Sbjct: 62 NPQDIISQKMKEVTLNMIREA--DLVLFVVDGKRGITKEDESLADFLRKS 109 Score = 32.7 bits (73), Expect = 0.22, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 7/112 (6%) Query: 8 SLRIVLVGKTGSGKSATANTILG-EEIFDSRIAAQAVTKNCQKASREWQGRDLLVVDTPG 66 ++++ +VG+ GKS N IL E S I T++ GR + VDT G Sbjct: 180 AIKVAIVGRPNVGKSTLFNAILNKERALVSPIPGT--TRDPVDDEVFIDGRKYVFVDTAG 237 Query: 67 LFDTKESLDTTCKEISRCIISSCPGPHAIVLVLLLGR---YTEEEQKTVALI 115 L K ++ E A V+V++L T ++Q+ L+ Sbjct: 238 L-RRKSRVEPRTVEKYSNYRVVDSIEKADVVVIVLDATQGITRQDQRMAGLM 288 >4DCU-A nrPDB Length = 456 Score = 40.4 bits (93), Expect = 9e-04, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 3/116 (2%) Query: 9 LRIVLVGKTGSGKSATANTILG-EEIFDSRIAAQAVTKNCQKASREWQGRDLLVVDTPGL 67 ++ L+G+ GKS+ N +LG E + S +A T++ S + ++ ++VDT G+ Sbjct: 196 IQFCLIGRPNVGKSSLVNAMLGEERVIVSNVAGT--TRDAVDTSFTYNQQEFVIVDTAGM 253 Query: 68 FDTKESLDTTCKEISRCIISSCPGPHAIVLVLLLGRYTEEEQKTVALIKAVFGKSA 123 + +TT K + + + +VL E+ K +A GK+ Sbjct: 254 RKKGKVYETTEKYSVLRALKAIDRSEVVAVVLDGEEGIIEQDKRIAGYAHEAGKAV 309 Score = 38.1 bits (87), Expect = 0.004, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 1/72 (1%) Query: 11 IVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLLVVDTPGLFDT 70 + +VG+ GKS N I GE I VT++ +S EW D ++DT G+ Sbjct: 26 VAIVGRPNVGKSTIFNRIAGERISIVEDTP-GVTRDRIYSSAEWLNYDFNLIDTGGIDIG 84 Query: 71 KESLDTTCKEIS 82 E ++ + Sbjct: 85 DEPFLAQIRQQA 96 >3J8G-X nrPDB Length = 490 Score = 39.3 bits (90), Expect = 0.002, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 1/77 (1%) Query: 3 ESEDRSLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLLVV 62 + + +++ +VG+ GKS N ILGEE T++ E GR+ +++ Sbjct: 197 DPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGT-TRDSIYIPMERDGREYVLI 255 Query: 63 DTPGLFDTKESLDTTCK 79 DT G+ + D K Sbjct: 256 DTAGVRKRGKITDAVEK 272 Score = 29.7 bits (65), Expect = 1.8, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 3/80 (3%) Query: 11 IVLVGKTGSGKSATANTILGEEIFDSRIA-AQAVTKNCQKASREWQGRDLLVVDTPGLFD 69 + LVG+ GKS N + D+ +A +T++ + E +GR+ + +DT G+ Sbjct: 5 VALVGRPNVGKSTLFNRLTRTR--DALVADFPGLTRDRKYGRAEIEGREFICIDTGGIDG 62 Query: 70 TKESLDTTCKEISRCIISSC 89 T++ ++T E S I Sbjct: 63 TEDGVETRMAEQSLLAIEEA 82 >1WF3-A nrPDB Length = 301 Score = 38.9 bits (89), Expect = 0.002, Method: Composition-based stats. Identities = 44/230 (19%), Positives = 92/230 (40%), Gaps = 30/230 (13%) Query: 1 MAESEDRSLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLL 60 MAE + +VGK GKS N +LG ++ Q T+ + R ++ Sbjct: 1 MAEKTYSGF-VAIVGKPNVGKSTLLNNLLGVKVAPISPRPQT-TRKRLRGILTEGRRQIV 58 Query: 61 VVDTPGLFDTKESLDTTCKEISRCIISSCPGPHAIVLVLLLGRYTEEEQKTVALIKAVFG 120 VDTPGL + +D + + + + + +A+V V+ L E + VA Sbjct: 59 FVDTPGL---HKPMDALGEFMDQEVYEALADVNAVVWVVDLRHPPTPEDELVARALKPL- 114 Query: 121 KSAMKHMVILFTRKEELEGQSFHDFIADADVGLKSIVKECGNRCCAFSNSKKTSKAEKES 180 K ++L K + + +A ++ E R + + ++ ++ + Sbjct: 115 --VGKVPILLVGNKLDAA-----KYPEEAMKAYHELLPEAEPRMLSALDERQVAELK--- 164 Query: 181 QVQELVELIEKMVQCNEGAYFSDDIYKDTEERLKQ------REEVLRKIY 224 +L+ L+ EG +F + Y +++ + REE +++++ Sbjct: 165 --ADLLALMP------EGPFFYPEDYAKSDQTFGEWVAEILREEAMKRLW 206 >5X4B-A nrPDB Length = 162 Score = 38.5 bits (88), Expect = 0.003, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 1/72 (1%) Query: 11 IVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLLVVDTPGLFDT 70 + +VG+ GKS N I GE I VT++ +S EW D ++DT G+ Sbjct: 5 VAIVGRPNVGKSTIFNRIAGERISIVEDTP-GVTRDRIYSSAEWLNYDFNLIDTGGIDIG 63 Query: 71 KESLDTTCKEIS 82 E ++ + Sbjct: 64 DEPFLAQIRQQA 75 >3IEU-A nrPDB Length = 301 Score = 38.1 bits (87), Expect = 0.004, Method: Composition-based stats. Identities = 27/109 (24%), Positives = 53/109 (48%), Gaps = 7/109 (6%) Query: 11 IVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLLVVDTPGL-FD 69 I +VG+ GKS N +LG++I + AQ T++ + VDTPGL + Sbjct: 11 IAIVGRPNVGKSTLLNKLLGQKISITSRKAQT-TRHRIVGIHTEGAYQAIYVDTPGLHME 69 Query: 70 TKESLDTTCKEISRCIISSCPGPHAIVLVLLLG-RYTEEEQKTVALIKA 117 K +++ + + SS G +V+ ++ G R+T +++ + ++ Sbjct: 70 EKRAINRLMNKAA----SSSIGDVELVIFVVEGTRWTPDDEMVLNKLRE 114 >3R9W-A nrPDB Length = 307 Score = 37.4 bits (85), Expect = 0.008, Method: Composition-based stats. Identities = 35/171 (20%), Positives = 66/171 (38%), Gaps = 16/171 (9%) Query: 11 IVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQK--ASREWQGRDLLVVDTPGLF 68 + +VGK GKS N +LG ++ S I+ +A T + ++ +DTPG++ Sbjct: 12 VAIVGKPNVGKSTLLNNLLGTKV--SIISPKAGTTRMRVLGVKNIPNEAQIIFLDTPGIY 69 Query: 69 DTKESLDTTCK--EISRCIISSCPGPHAIVLVLLLGRYTEEEQKTVALIKAVFGKSAMKH 126 + K+S EI++ + ++L + TE + I F K K Sbjct: 70 EPKKSDVLGHSMVEIAKQSLEEA------DVILFMIDATEGWRPRDEEIYQNFIKPLNKP 123 Query: 127 MVILFTRKEELEG----QSFHDFIADADVGLKSIVKECGNRCCAFSNSKKT 173 ++++ + +++ D I L IV + KT Sbjct: 124 VIVVINKIDKIGPAKNVLPLIDEIHKKHPELTEIVPISALKGANLDELVKT 174 >5AR1-A nrPDB Length = 303 Score = 36.6 bits (83), Expect = 0.013, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 35/75 (46%), Gaps = 12/75 (16%) Query: 8 SLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRD--------- 58 + +++VG++GSG+S NT+ G+++ D+ T + + + Sbjct: 27 TFTVMIVGQSGSGRSTFINTLCGQQVVDTSTTILLPTDTSTEIDLQLREETVELEDDEGV 86 Query: 59 ---LLVVDTPGLFDT 70 L ++DTPG D+ Sbjct: 87 KIQLNIIDTPGFGDS 101 >3A1W-A nrPDB Length = 168 Score = 35.4 bits (80), Expect = 0.028, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 38/89 (42%), Gaps = 4/89 (4%) Query: 9 LRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLLVVDTPGLF 68 +++ L G GK++ N + G + + + V K + ++G + ++D PG + Sbjct: 6 VKVALAGCPNVGKTSLFNALTGTKQYVANWPGVTVEKK--EGVFTYKGYTINLIDLPGTY 63 Query: 69 DTKESLDTTCKEISRCIISSCPGPHAIVL 97 S ++I+R + I++ Sbjct: 64 SLGYSSID--EKIARDYLLKGDADLVILV 90 >3A1U-A nrPDB Length = 258 Score = 34.3 bits (77), Expect = 0.066, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 38/89 (42%), Gaps = 4/89 (4%) Query: 9 LRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLLVVDTPGLF 68 +++ L G GK++ N + G + + + V K + ++G + ++D PG + Sbjct: 6 VKVALAGCPNVGKTSLFNALTGTKQYVANWPGVTVEKK--EGVFTYKGYTINLIDLPGTY 63 Query: 69 DTKESLDTTCKEISRCIISSCPGPHAIVL 97 S ++I+R + I++ Sbjct: 64 SLGYSSID--EKIARDYLLKGDADLVILV 90 >2WJI-A nrPDB Length = 165 Score = 34.3 bits (77), Expect = 0.067, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 41/105 (39%), Gaps = 12/105 (11%) Query: 7 RSLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLLVVDTPG 66 +S I L+G GKS N + GE ++ V K + E+ G VVD PG Sbjct: 2 KSYEIALIGNPNVGKSTIFNALTGENVYIGNWPGVTVEKK--EGEFEYNGEKFKVVDLPG 59 Query: 67 LFD-TKESLDTTCK---------EISRCIISSCPGPHAIVLVLLL 101 ++ T S+D ++ I+ + + L L L Sbjct: 60 VYSLTANSIDEIIARDYIINEKPDLVVNIVDATALERNLYLTLQL 104 >2WJG-A nrPDB Length = 188 Score = 34.3 bits (77), Expect = 0.067, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 41/105 (39%), Gaps = 12/105 (11%) Query: 7 RSLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLLVVDTPG 66 +S I L+G GKS N + GE ++ V K + E+ G VVD PG Sbjct: 6 KSYEIALIGNPNVGKSTIFNALTGENVYIGNWPGVTVEKK--EGEFEYNGEKFKVVDLPG 63 Query: 67 LFD-TKESLDTTCK---------EISRCIISSCPGPHAIVLVLLL 101 ++ T S+D ++ I+ + + L L L Sbjct: 64 VYSLTANSIDEIIARDYIINEKPDLVVNIVDATALERNLYLTLQL 108 >5KCS-1w nrPDB Length = 639 Score = 34.3 bits (77), Expect = 0.068, Method: Composition-based stats. Identities = 27/148 (18%), Positives = 46/148 (31%), Gaps = 24/148 (16%) Query: 7 RSLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLLVVDTPG 66 S I +G G + T NT+L + +T S +W+ + ++DTPG Sbjct: 26 NSGAITELGSVDKGTTRTDNTLLERQR--------GITIQTGITSFQWENTKVNIIDTPG 77 Query: 67 LFDTKESLDTTCKEISRCIISSCPGPHAIVLVLLLGRYTEEEQKTVALIKAVFGKSAMKH 126 D ++ S AI+L+ + + ++ M Sbjct: 78 HMDF----------LAEVYRSLSVLDGAILLISAKDGVQAQTRILFHALRK------MGI 121 Query: 127 MVILFTRKEELEGQSFHDFIADADVGLK 154 I F K + G D L Sbjct: 122 PTIFFINKIDQNGIDLSTVYQDIKEKLS 149 >3CNO-A nrPDB Length = 262 Score = 33.5 bits (75), Expect = 0.099, Method: Composition-based stats. Identities = 30/120 (25%), Positives = 52/120 (43%), Gaps = 22/120 (18%) Query: 6 DRSLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQ-AVTKNCQKASREWQGRDLLVVDT 64 DR R+++VG +GKS N + G+ S + AQ +TK Q S E + ++DT Sbjct: 97 DRLARVLIVGVPNTGKSTIINKLKGKRA--SSVGAQPGITKGIQWFSLENG---VKILDT 151 Query: 65 PGLFDTKESLDTTCKEISRCIISSCPGPHAIVL-VLLLGRYTEEEQKTVALIKAVFGKSA 123 PG+ + + I S +++ L + R E+Q+ +F +S Sbjct: 152 PGI-------------LYKNIFSEDLAAKLLLVGSLPVERI--EDQRIFERAFEIFARSI 196 >3GEH-A nrPDB Length = 462 Score = 33.1 bits (74), Expect = 0.15, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 48/109 (44%), Gaps = 5/109 (4%) Query: 9 LRIVLVGKTGSGKSATANT-ILGEEIFDSRIAAQAVTKNCQKASREWQGRDLLVVDTPGL 67 L++ +VG+ GKS+ N + + + T++ ++ G + V+DT G+ Sbjct: 225 LKVAIVGRPNVGKSSLLNAWSQSDRAIVTDLPGT--TRDVVESQLVVGGIPVQVLDTAGI 282 Query: 68 FDTKESLDTTCKEISRCIISSCPGPHAIVLVLLLGRYTEEEQKTVALIK 116 +T + ++ E SR ++ ++ + +T +Q+ +K Sbjct: 283 RETSDQVEKIGVERSRQAANTA--DLVLLTIDAATGWTTGDQEIYEQVK 329 >5KH0-A nrPDB Length = 396 Score = 33.1 bits (74), Expect = 0.16, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 29/62 (46%) Query: 11 IVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLLVVDTPGLFDT 70 I + G+ GKS+ N ++G+E+ A T K+ + ++DTPGL D Sbjct: 11 IAITGRRNVGKSSFMNALIGQEVSIVSNVAGTTTDPVFKSMELSPVGPITLIDTPGLDDV 70 Query: 71 KE 72 E Sbjct: 71 GE 72 >5DN8-A nrPDB Length = 446 Score = 32.7 bits (73), Expect = 0.21, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 47/113 (41%), Gaps = 8/113 (7%) Query: 9 LRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLLVVDTPGLF 68 ++I ++G+ GKS N +LGEE T++ + ++DT G+ Sbjct: 179 IKIAMIGRPNVGKSTLINRLLGEERVIVYDQPGT-TRDSIYIPFARNDENYTLIDTAGI- 236 Query: 69 DTKESLDTTCKEISRCIISSCPGPHAIVLVLLL----GRYTEEEQKTVALIKA 117 + + ++ S +I S HA +V+ L TE++ + + I Sbjct: 237 RRRAKIQDYVEKFS--MIKSLQAMHAADVVIFLLDARQGVTEQDLRLLNRIVE 287 >5CYO-A nrPDB Length = 274 Score = 32.7 bits (73), Expect = 0.22, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 9/71 (12%) Query: 8 SLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLL------- 60 I++VG++G GKS NT+ +I + + + + + D+ Sbjct: 4 EFNIMVVGQSGLGKSTLINTLFKSKISRKSVQPTSEERIPKTIEIKSITHDIEEKGVRMK 63 Query: 61 --VVDTPGLFD 69 V+DTPG D Sbjct: 64 LTVIDTPGFGD 74 >3KZ4-A nrPDB Length = 880 Score = 32.0 bits (71), Expect = 0.37, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 5/68 (7%) Query: 203 DDIYKDTEERLKQREEVLRK---IYTDQLNEEIKLVEEDKHKSEEEKEKEIKLLKLKYDE 259 DD +D R++ ++VL K + TD EEIK+ +E K ++EE ++ +++LK K +E Sbjct: 24 DDEKQDQNNRMQLSDKVLSKKEEVVTDS-QEEIKIADEVKKSTKEESKQLLEVLKTK-EE 81 Query: 260 KIKNIREE 267 K I+ E Sbjct: 82 HQKEIQYE 89 >2GJ9-A nrPDB Length = 172 Score = 31.6 bits (70), Expect = 0.40, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 35/74 (47%), Gaps = 1/74 (1%) Query: 9 LRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLLVVDTPGLF 68 +++V+ G+ +GKS+ N + G E A T++ + G L ++DT GL Sbjct: 5 MKVVIAGRPNAGKSSLLNALAGREAAIVTDIAGT-TRDVLREHIHIDGMPLHIIDTAGLR 63 Query: 69 DTKESLDTTCKEIS 82 + + ++ E + Sbjct: 64 EASDEVERIGIERA 77 >6G12-A nrPDB Length = 301 Score = 31.6 bits (70), Expect = 0.46, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 8/79 (10%) Query: 7 RSLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREW--QGRDLLVVDT 64 R++R ++VG GKS N + I AQ K ++W G L ++DT Sbjct: 126 RAIRAMIVGIPNVGKSTLINKLAKRSI------AQTGNKPGVTKQQQWIKVGNALQLLDT 179 Query: 65 PGLFDTKESLDTTCKEISR 83 PG+ K + K++S Sbjct: 180 PGILWPKFEDEEVGKKLSL 198 >6OJ5-A nrPDB Length = 887 Score = 31.6 bits (70), Expect = 0.48, Method: Composition-based stats. Identities = 27/99 (27%), Positives = 54/99 (54%), Gaps = 11/99 (11%) Query: 170 SKKTSKAEKESQVQELVELIE-KMVQCNEGAYFSDDIYKDTEERLKQREEVLRKIYTDQL 228 +++ + +++ ++QE E N+ A + +E+ L Q+EEV+ TD Sbjct: 8 ARRETNLKQDDRMQEKEENKNVNTNSENKNATKP----QLSEKVLSQKEEVI----TDN- 58 Query: 229 NEEIKLVEEDKHKSEEEKEKEIKLLKLKYDEKIKNIREE 267 EEIK+ +E K ++EE ++ +++LK K +E K ++ E Sbjct: 59 QEEIKIADEVKKSNKEESKQLLEVLKTK-EEHQKEVQYE 96 >4R98-A nrPDB Length = 271 Score = 31.2 bits (69), Expect = 0.56, Method: Composition-based stats. Identities = 24/94 (25%), Positives = 35/94 (37%), Gaps = 4/94 (4%) Query: 7 RSLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLLVVDTPG 66 + L I L+G SGK+ N + G A V + + + +VD PG Sbjct: 2 KKLTIGLIGNPNSGKTTLFNQLTGSRQRVGNWAGVTVERK--EGQFSTTDHQVTLVDLPG 59 Query: 67 LFD-TKESLDTTCKEISRC-IISSCPGPHAIVLV 98 + T S T+ E C I S I +V Sbjct: 60 TYSLTTISSQTSLDEQIACHYILSGDADLLINVV 93 >5XC3-A nrPDB Length = 176 Score = 31.2 bits (69), Expect = 0.58, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 29/83 (34%), Gaps = 1/83 (1%) Query: 5 EDRSLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGR-DLLVVD 63 E+ +I+L+G +G GKS+ + L + ++ + L + D Sbjct: 2 ENNGYKIILIGSSGVGKSSIVHQFLFNRKISNVSPTIGAAFASKQVIAKNGKTLKLNIWD 61 Query: 64 TPGLFDTKESLDTTCKEISRCII 86 T G + C++ Sbjct: 62 TAGQERFRSITKMYYTNSLGCLV 84 >1IBW-B nrPDB Length = 228 Score = 31.2 bits (69), Expect = 0.61, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 40/138 (28%), Gaps = 21/138 (15%) Query: 39 AAQAVTKNCQKASREWQGRDLLVVDTPGLFDTKESLDTTCKEISRCIISSCPGPHAIVLV 98 + + +W G +L + D L D T ++ P P + ++ Sbjct: 16 SPEVDKAKPLFTETQWDGSELPIYDAKPLQDALVEYFGTEQDRRH-----YPAPGSFIVC 70 Query: 99 LLLGRYTEEEQKTVALIKAVFGKSAMKHMVILFTRK---------------EELEGQSFH 143 G T E K A +K G + I F + E Sbjct: 71 ANKG-VTAERPKNDADMKPGQGYGVWSAIAISFAKDPTKDSSMFVEDAGVWETPNEDELL 129 Query: 144 DFIADADVGLKSIVKECG 161 +++ + + ECG Sbjct: 130 EYLEGRRKAMAKSIAECG 147 >3K53-A nrPDB Length = 271 Score = 31.2 bits (69), Expect = 0.63, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 4/89 (4%) Query: 10 RIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLLVVDTPGLFD 69 + LVG GK+ N + G V K + E++ ++ LVVD PG++ Sbjct: 5 TVALVGNPNVGKTTIFNALTGLRQHVGNWPGVTVEKK--EGIMEYREKEFLVVDLPGIYS 62 Query: 70 TKESLDTTCKEISRCIISSCPGPHAIVLV 98 + I+R I + +V Sbjct: 63 LTAHSID--ELIARNFILDGNADVIVDIV 89 >1PUJ-A nrPDB Length = 282 Score = 31.2 bits (69), Expect = 0.64, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 8/64 (12%) Query: 7 RSLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQ--GRDLLVVDT 64 R++R +++G GKS N + + I A+ + S++W G++L ++DT Sbjct: 119 RAIRALIIGIPNVGKSTLINRLAKKNI------AKTGDRPGITTSQQWVKVGKELELLDT 172 Query: 65 PGLF 68 PG+ Sbjct: 173 PGIL 176 >3FTQ-A nrPDB Length = 274 Score = 30.8 bits (68), Expect = 0.71, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 9/68 (13%) Query: 8 SLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLL------- 60 +++VG++G GKS N++ +++ RI A K + E ++ Sbjct: 5 EFTLMVVGESGLGKSTLINSLFLTDLYPERIIPGAAEKIERTVQIEASTVEIEERGVKLR 64 Query: 61 --VVDTPG 66 VVDTPG Sbjct: 65 LTVVDTPG 72 >4Z54-A nrPDB Length = 287 Score = 30.8 bits (68), Expect = 0.80, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 9/68 (13%) Query: 11 IVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQG---------RDLLV 61 I++VG++G GKS NT+ ++ + K + + G L V Sbjct: 22 IMVVGQSGLGKSTLVNTLFKSQVSRKASSWNREEKIPKTVEIKAIGHVIEEGGVKMKLTV 81 Query: 62 VDTPGLFD 69 +DTPG D Sbjct: 82 IDTPGFGD 89 >2QAG-A nrPDB Length = 361 Score = 30.8 bits (68), Expect = 0.83, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 9/68 (13%) Query: 8 SLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLL------- 60 +++VG++G GKS N++ +++ R+ A K + E ++ Sbjct: 37 EFTLMVVGESGLGKSTLINSLFLTDLYPERVIPGAAEKIERTVQIEASTVEIEERGVKLR 96 Query: 61 --VVDTPG 66 VVDTPG Sbjct: 97 LTVVDTPG 104 >1XZP-A nrPDB Length = 482 Score = 30.4 bits (67), Expect = 0.93, Method: Composition-based stats. Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 6/114 (5%) Query: 6 DRSLRIVLVGKTGSGKSATANTILGE-EIFDSRIAAQAVTKNCQKASREWQGRDLLVVDT 64 +R LR+V+VGK GKS N +L E + I T++ +G +VDT Sbjct: 241 NRGLRMVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGT--TRDVISEEIVIRGILFRIVDT 298 Query: 65 PGL-FDTKESLDTTCKEISRCIISSCPGPHAIVLVLLLGRYTEEEQKTVALIKA 117 G+ +T + ++ E + I + ++ EE++K + IK Sbjct: 299 AGVRSETNDLVERLGIERTLQEIEKA--DIVLFVLDASSPLDEEDRKILERIKN 350 >4LV5-B nrPDB Length = 423 Score = 30.4 bits (67), Expect = 0.95, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 2/83 (2%) Query: 1 MAESEDRSLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLL 60 + E + L + + G+TGSGKS+ NT+ G + A V + + Sbjct: 72 LKEIDSSVLNVAVTGETGSGKSSFINTLRGIGNEEEGAAKTGVVEVTMERHPYKHPNIPN 131 Query: 61 VV--DTPGLFDTKESLDTTCKEI 81 VV D PG+ T +T +++ Sbjct: 132 VVFWDLPGIGSTNFPPNTYLEKM 154 >5T62-W nrPDB Length = 651 Score = 30.0 bits (66), Expect = 1.3, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 6/61 (9%) Query: 9 LRIVLVGKTGSGKSATANTILG-EEIFDSRIAAQAVTKNCQKASREWQGRDLLVVDTPGL 67 + I LVG GKS+T N+++G +++ S + K S +++ D PGL Sbjct: 337 INIGLVGYPNVGKSSTINSLVGAKKVSVSSTPGKTKHFQTIKLSDS-----VMLCDCPGL 391 Query: 68 F 68 Sbjct: 392 V 392 >2OCB-A nrPDB Length = 180 Score = 29.7 bits (65), Expect = 1.5, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 4/80 (5%) Query: 9 LRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGR--DLLVVDTPG 66 L+++L+G G GKS+ N + + FDS+ A + E GR L + DT G Sbjct: 8 LKVILLGDGGVGKSSLMNRYVTNK-FDSQ-AFHTIGVEFLNRDLEVDGRFVTLQIWDTAG 65 Query: 67 LFDTKESLDTTCKEISRCII 86 K + C++ Sbjct: 66 QERFKSLRTPFYRGADCCLL 85 >2AKY-A nrPDB Length = 220 Score = 29.7 bits (65), Expect = 1.5, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 54/158 (34%), Gaps = 12/158 (7%) Query: 8 SLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDL-LVVDTPG 66 S+R+VL+G G+GK A + +E F + A Q A G + ++D G Sbjct: 4 SIRMVLIGPPGAGKGTQAPNL--QERFHAAHLATGDMLRSQIAKGTQLGLEAKKIMDQGG 61 Query: 67 LFDTKESLDTTCKEISRC-------IISSCPGPHAIVLVLLLGRYTEEEQKTVALIKAVF 119 L ++ E++ I+ P I L + +E+ + + Sbjct: 62 LVSDDIMVNMIKDELTNNPACKNGFILDGF--PRTIPQAEKLDQMLKEQGTPLEKAIELK 119 Query: 120 GKSAMKHMVILFTRKEELEGQSFHDFIADADVGLKSIV 157 + I G+S+H +K V Sbjct: 120 VDDELLVARITGRLIHPASGRSYHKIFNPPKEDMKDDV 157 >6N8N-W nrPDB Length = 640 Score = 29.7 bits (65), Expect = 1.6, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 6/61 (9%) Query: 9 LRIVLVGKTGSGKSATANTILG-EEIFDSRIAAQAVTKNCQKASREWQGRDLLVVDTPGL 67 + I LVG GKS+T N+++G +++ S + K S +++ D PGL Sbjct: 337 INIGLVGYPNVGKSSTINSLVGAKKVSVSSTPGKTKHFQTIKLSDS-----VMLCDCPGL 391 Query: 68 F 68 Sbjct: 392 V 392 >3GEE-A nrPDB Length = 476 Score = 29.7 bits (65), Expect = 1.8, Method: Composition-based stats. Identities = 50/235 (21%), Positives = 90/235 (38%), Gaps = 33/235 (14%) Query: 12 VLVGKTGSGKSATANTILG-EEIFDSRIAAQAVTKNCQKASREWQGRDLLVVDTPGLFDT 70 V+ GK +GKS NT+LG E S + T++ + + DT GL + Sbjct: 237 VIAGKPNAGKSTLLNTLLGQERAIVSHMPGT--TRDYIEECFIHDKTMFRLTDTAGLREA 294 Query: 71 KESLDTTCKEISRCIISSCPGPHAIVLVLLLGRYTEEEQKTVALIKAVFGKSAMKHMVIL 130 E ++ SR ++ I+ +L LG TE + I+ + A Sbjct: 295 GEEIEHEGIRRSRMKMAEADL---ILYLLDLG--TERLDDELTEIREL---KAAHPAAKF 346 Query: 131 FTRKEELEGQSFHDFIADADVGLKSIVKECGNRCCAFSNSKKTSKAEKESQVQELVELIE 190 T +L D A+AD +++I G S ++ Q + +L++ Sbjct: 347 LTVANKL------DRAANADALIRAIADGTGTEVIGISALN---GDGIDTLKQHMGDLVK 397 Query: 191 KMVQCNEGAYFSDDIYKDTEERLKQREEVLRKIYTDQLNEEIKLVEEDKHKSEEE 245 + + +E + + + E LR +D L ++L+ H+SE E Sbjct: 398 NLDKLHEASVLVTSL---------RHYEALRNA-SDALQNALELI---AHESETE 439 >4M8N-E nrPDB Length = 199 Score = 29.3 bits (64), Expect = 2.0, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 1/63 (1%) Query: 4 SEDRSLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLLVVD 63 R ++V++G G GKSA + + IF + ++ + Q L ++D Sbjct: 2 PHMREYKLVVLGSGGVGKSALTVQFV-QGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILD 60 Query: 64 TPG 66 T G Sbjct: 61 TAG 63 >6FGZ-A nrPDB Length = 774 Score = 29.3 bits (64), Expect = 2.1, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 2/42 (4%) Query: 10 RIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKAS 51 +I++VG SGKS+ ++GE IF VT+ Sbjct: 28 QIMVVGAQSSGKSSVLENVVGESIFPRGTGI--VTRRPIVVQ 67 >2C4M-A nrPDB Length = 796 Score = 29.3 bits (64), Expect = 2.2, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 19/26 (73%) Query: 266 EEAERNIFKDVFNRIWKMLSEIWHRF 291 E+ + IF+ +F R+W++++EI RF Sbjct: 343 EQWDEQIFQQLFWRVWEIIAEIDRRF 368 >2AKJ-A nrPDB Length = 608 Score = 28.9 bits (63), Expect = 2.4, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 51/124 (41%), Gaps = 15/124 (12%) Query: 87 SSCPGPHAIVLVLLLGRYTEEEQKTVALIKAVFGKSAMKHMV--------ILFTRKEELE 138 S G H + +GR +E + +A I V+G ++ V + ++ + L Sbjct: 410 LSFVGLH-----IPVGRLQADEMEELARIADVYGSGELRLTVEQNIIIPNVENSKIDSLL 464 Query: 139 GQSF--HDFIADADVGLKSIVKECGNRCCAFSNSKKTSKAEKESQVQELVELIEKMVQCN 196 + + + + +K +V G++ C + + ++A K ++ + + + + V+ + Sbjct: 465 NEPLLKERYSPEPPILMKGLVACTGSQFCGQAIIETKARALKVTEEVQRLVSVTRPVRMH 524 Query: 197 EGAY 200 Sbjct: 525 WTGC 528 >3PE0-A nrPDB Length = 283 Score = 28.9 bits (63), Expect = 2.6, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 40/79 (50%) Query: 170 SKKTSKAEKESQVQELVELIEKMVQCNEGAYFSDDIYKDTEERLKQREEVLRKIYTDQLN 229 S + + + S + +L IE ++ N + ++ E +L++ +E LR+ Y+ + Sbjct: 87 SFQAALQTQWSWMLQLCCCIEAHLKENAAYFQFFSDVREAEGQLQKLQEALRRKYSCDRS 146 Query: 230 EEIKLVEEDKHKSEEEKEK 248 + +E+ +++EKE+ Sbjct: 147 ATVTRLEDLLQDAQDEKEQ 165 >5NLY-A nrPDB Length = 405 Score = 28.9 bits (63), Expect = 2.6, Method: Composition-based stats. Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 1/30 (3%) Query: 221 RKIYTDQLNEEIKLVEE-DKHKSEEEKEKE 249 RK +TD L E I V+E +KH+ E E EK+ Sbjct: 370 RKKFTDDLRESIAEVQEMEKHRIESELEKQ 399 >2P4W-A nrPDB Length = 202 Score = 28.9 bits (63), Expect = 2.7, Method: Composition-based stats. Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 10/94 (10%) Query: 206 YKDTEERLKQREEV---LRKI--YTDQLNEEIKLVEEDKHKSEEEKEKEIKLLKLKYDEK 260 Y+ +E +K +E + +R++ + +LNE I+ + E+K + EE ++L Y E Sbjct: 107 YEQAKELIKSQEPINVKMRELAEFLHELNERIREIIEEKRELEEA-----RILIETYIEN 161 Query: 261 IKNIREEAERNIFKDVFNRIWKMLSEIWHRFLSK 294 E R I +++F I K+L + R L + Sbjct: 162 TMRRLAEENRQIIEEIFRDIEKILPPGYARSLKE 195 >3QWM-A nrPDB Length = 140 Score = 28.9 bits (63), Expect = 2.8, Method: Composition-based stats. Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 1/30 (3%) Query: 221 RKIYTDQLNEEIKLVEE-DKHKSEEEKEKE 249 RK +TD L E I V+E +KH+ E E EK+ Sbjct: 110 RKKFTDDLRESIAEVQEMEKHRIESELEKQ 139 >5NO4-Z nrPDB Length = 313 Score = 28.9 bits (63), Expect = 3.0, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 35/64 (54%), Gaps = 4/64 (6%) Query: 12 VLVGKTGSGKSATANTILG--EEIFDSRIAAQA-VTKNCQKASREWQGRD-LLVVDTPGL 67 + G++G GKS+ N +LG +EI + I+ + + ++ A+R + V+D+PG+ Sbjct: 178 IFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGV 237 Query: 68 FDTK 71 + Sbjct: 238 REFG 241 >2DYK-A nrPDB Length = 161 Score = 28.9 bits (63), Expect = 3.1, Method: Composition-based stats. Identities = 22/129 (17%), Positives = 51/129 (39%), Gaps = 11/129 (8%) Query: 10 RIVLVGKTGSGKSATANTILGEE-IFDSRIAAQAVTKNCQKASREWQGRDLLVVDTPGLF 68 ++V+VG+ GKS+ N +L + + + + L+VDT GL+ Sbjct: 3 KVVIVGRPNVGKSSLFNRLLKKRSAVVADVPGVTRDLKEGVVETDRGRF--LLVDTGGLW 60 Query: 69 DTKESLDTTCKEISRCIISSCPGPHAIVLVLLLGRYTEEEQKTVALIKAVFGKSAMKHMV 128 + +++ R +VL + GR E + + + + K ++ Sbjct: 61 SGDKWEKKIQEKVDR-----ALEDAEVVLFAVDGR--AELTQADYEVAE-YLRRKGKPVI 112 Query: 129 ILFTRKEEL 137 ++ T+ ++ Sbjct: 113 LVATKVDDP 121 >5ZWO-w nrPDB Length = 280 Score = 28.5 bits (62), Expect = 3.3, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 43/86 (50%), Gaps = 3/86 (3%) Query: 178 KESQVQELVELIEKMVQCNEGAYFSDDIYKDTEERLKQREEVLRKIYTDQLNEEIKLV-- 235 +++Q++E ++ ++ + G F + + +D ++++ L + YT +NE V Sbjct: 4 EDTQLKEDIKTTVNYIKQH-GVEFENKLLEDERFSFIKKDDPLHEYYTKLMNEPTDTVSG 62 Query: 236 EEDKHKSEEEKEKEIKLLKLKYDEKI 261 E++ KSE E + L +YD I Sbjct: 63 EDNDRKSEREIARPPDFLFSQYDTGI 88 >1SUL-A nrPDB Length = 195 Score = 28.5 bits (62), Expect = 3.3, Method: Composition-based stats. Identities = 24/146 (16%), Positives = 50/146 (34%), Gaps = 13/146 (8%) Query: 4 SEDRSLRIVLVGKTGSGKSATANTILGEEIF--DSRIAAQAVTKNCQKASREWQGRDLLV 61 E I L G++ GKS+ N+++ + S + T N +L Sbjct: 19 PEGGLPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYII-----NDELHF 73 Query: 62 VDTPGLFDTKESLD--TTCKEISRCIISSCPGPHAIVLVLLLGRYTEEEQKTVALIKAVF 119 VD PG K S + I++ A+V ++ L + + + Sbjct: 74 VDVPGYGFAKVSKSEREAWGRMIETYITTREELKAVVQIVDLRHAPSNDDVQMYEFLKYY 133 Query: 120 GKSAMKHMVILFTRKEELEGQSFHDF 145 G +++ T+ +++ + Sbjct: 134 GIPV----IVIATKADKIPKGKWDKH 155 >4LMB-A nrPDB Length = 322 Score = 28.5 bits (62), Expect = 3.3, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 34/81 (41%), Gaps = 7/81 (8%) Query: 58 DLLVVDTPGLFDTKESLDTTCKEISRCIISSCPGPHAIVLVLLLGRYTEEEQKTVALIKA 117 ++++VD F L ++S A+ + +G+ E E K + +I+ Sbjct: 249 EVIIVDDTEAFAYARRLA-----RQEGLLSGISAGAALWAAIQVGKRPENEDKLIVMIQP 303 Query: 118 VFGKSAMKHMVILFTRKEELE 138 FG+ + LF E+++ Sbjct: 304 SFGERYLSTA--LFKDLEDID 322 >2QTH-A nrPDB Length = 364 Score = 28.5 bits (62), Expect = 3.4, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 34/70 (48%), Gaps = 4/70 (5%) Query: 2 AESEDRSLRIVLVGKTGSGKSATANTILG-EEIFDSRIAAQAVTKNCQKASREWQGRDLL 60 + + I +VG T SGK++ N++ G + D+++ T + ++ + R ++ Sbjct: 173 SNKRNNIPSIGIVGYTNSGKTSLFNSLTGLTQKVDTKLFT---TMSPKRYAIPINNRKIM 229 Query: 61 VVDTPGLFDT 70 +VDT G Sbjct: 230 LVDTVGFIRG 239 >5OWV-A nrPDB Length = 732 Score = 28.5 bits (62), Expect = 3.5, Method: Composition-based stats. Identities = 46/240 (19%), Positives = 91/240 (37%), Gaps = 29/240 (12%) Query: 48 QKASREWQGRDLLVVDTPGLFDTKESLDTTCKEISRCIISSCPGPHAIVLVLLLGRYTEE 107 K+ E+ ++ +VDTPGL D + E R + L+ L+ Sbjct: 283 IKSHLEFLKNNISIVDTPGLDDVVVQREIVTNEYLR---------ESDFLIHLMNASQSL 333 Query: 108 EQKTVALIKAVFGKSAMKHMVILFTRKEELEGQSFHDFIADADVGLKS-IVKECGNRCCA 166 QK + S + +I+ T+ + L + + I LKS +V N Sbjct: 334 TQKDADFLVHCLLNSRLSKFLIVLTKADLLSKKDLEEVIVYTKESLKSRLVDLDENLVEK 393 Query: 167 FSNSKKTSKAEKE-SQVQELVELIEKMVQCNEGAYFSDDIYKDTEERLKQREEVLRKIYT 225 ++K + + E ++K Y +++Y + ++ + Y Sbjct: 394 IDFLCVSAKMASDFYKGLASKESLQKSGMQEFENYLFNELYAGEKSKIA------LRAYK 447 Query: 226 DQLNEEIK-----------LVEEDKHKSEEEKEKEIKLLKLKYDEKIKNIREEAERNIFK 274 +L+ E+K L++E+K EE +K + L+ K + +K ++E +I K Sbjct: 448 KELHLELKNILSEYEMQNRLIKENKQGVSEENQKLLLELQ-KQNTLLKEAQDEISNSIAK 506 >2H34-A nrPDB Length = 309 Score = 28.5 bits (62), Expect = 3.7, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 38/104 (36%), Gaps = 14/104 (13%) Query: 13 LVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASR---------EWQGRDLLVVD 63 LVG+ G G A + E I ++ ++ ++ + +R Q ++ + Sbjct: 41 LVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIH 100 Query: 64 TPGLFDTKESLD-TTCKEISRCIISSCPG----PHAIVLVLLLG 102 G D + +D + + G P A+ +V +G Sbjct: 101 DFGEIDGQLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIG 144 >1ZC4-A nrPDB Length = 175 Score = 28.5 bits (62), Expect = 3.8, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 32/70 (45%), Gaps = 1/70 (1%) Query: 10 RIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLLVVDTPGLFD 69 ++++VG G GKSA + +E + +A + +K + + + ++DT GL D Sbjct: 8 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYR-KKVVLDGEEVQIDILDTAGLED 66 Query: 70 TKESLDTTCK 79 D + Sbjct: 67 YAAIRDNYFR 76 >4QXA-A nrPDB Length = 208 Score = 28.1 bits (61), Expect = 4.2, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 35/88 (39%), Gaps = 4/88 (4%) Query: 1 MAESEDRSLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGR--D 58 M + +I+L+G G GKS+ N + + FDS++ + E G Sbjct: 1 MMAGKSSLFKIILLGDGGVGKSSLMNRYVTNK-FDSQL-FHTIGVEFLNKDLEVDGHFVT 58 Query: 59 LLVVDTPGLFDTKESLDTTCKEISRCII 86 + + DT GL + + C++ Sbjct: 59 MQIWDTAGLERFRSLRTPFYRGSDCCLL 86 >2G3Y-A nrPDB Length = 211 Score = 28.1 bits (61), Expect = 4.4, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 18/29 (62%) Query: 2 AESEDRSLRIVLVGKTGSGKSATANTILG 30 +ES + R+VL+G+ G GKS AN G Sbjct: 31 SESGNTYYRVVLIGEQGVGKSTLANIFAG 59 >2KE5-A nrPDB Length = 174 Score = 28.1 bits (61), Expect = 4.9, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 32/70 (45%), Gaps = 1/70 (1%) Query: 10 RIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLLVVDTPGLFD 69 ++++VG G GKSA + +E + +A + +K + + + ++DT GL D Sbjct: 5 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYR-KKVVLDGEEVQIDILDTAGLED 63 Query: 70 TKESLDTTCK 79 D + Sbjct: 64 YAAIRDNYFR 73 >5IDV-A nrPDB Length = 279 Score = 28.1 bits (61), Expect = 5.1, Method: Composition-based stats. Identities = 8/28 (28%), Positives = 17/28 (60%) Query: 10 RIVLVGKTGSGKSATANTILGEEIFDSR 37 + LVG++G+GK++ N ++ + S Sbjct: 67 TVALVGRSGAGKTSLVNMLVRFQEVSSG 94 >2YKR-W nrPDB Length = 350 Score = 28.1 bits (61), Expect = 5.1, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 35/64 (54%), Gaps = 4/64 (6%) Query: 12 VLVGKTGSGKSATANTILG--EEIFDSRIAAQA-VTKNCQKASREWQGRD-LLVVDTPGL 67 + G++G GKS+ N +LG +EI + ++ + + ++ A+R + V+D+PG+ Sbjct: 211 IFAGQSGVGKSSLLNALLGLQKEILTNDVSDNSGLGQHTTTAARLYHFPHGGDVIDSPGV 270 Query: 68 FDTK 71 + Sbjct: 271 REFG 274 >2PC6-A nrPDB Length = 165 Score = 28.1 bits (61), Expect = 5.2, Method: Composition-based stats. Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 10/75 (13%) Query: 215 QREEVLRKIYTDQLNEEIKLVEEDKHKSEEEKEKEIKLLKLKYDEKIKNIREEAER--NI 272 +E++ +I T QLN+ I++V+ SE E+E+ L+K++ + REE +R +I Sbjct: 54 GPDEIVEQI-TKQLNKLIEVVKLIDLSSEGYVERELMLVKVR---AVGKDREEMKRLADI 109 Query: 273 FK----DVFNRIWKM 283 F+ DV N ++ + Sbjct: 110 FRGNIIDVTNELYTI 124 >1T6M-A nrPDB Length = 299 Score = 27.7 bits (60), Expect = 5.9, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 42/101 (41%), Gaps = 25/101 (24%) Query: 172 KTSKAEKESQVQELVELIEKMVQCNEGAYFSDDIYKDTEERLKQREEVLRKIYTDQLNEE 231 KT K + + L+++ NE +++ + D E +T +N+ Sbjct: 145 KTEGNIKLGDARGKIVLLKRYSGSNESGGYNNFYWPDNE------------TFTTTVNQN 192 Query: 232 IKLVEEDKHKSEEEKEKEIKLLKLKYDEKIKNIREEAERNI 272 + + +DK+K + YDEK+K+I++ + + Sbjct: 193 VNVTVQDKYK-------------VNYDEKVKSIKDTMDETM 220 >4E4G-A nrPDB Length = 521 Score = 27.7 bits (60), Expect = 5.9, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 55/156 (35%), Gaps = 25/156 (16%) Query: 86 ISSCPGPHAIVLV--LLLGRYTEEEQKTVALIKAVFGKSAMKHMVILFTRKEELEGQSFH 143 I + P A+ V + RY FG A HM+I+ + Sbjct: 235 ILTHPDIAAVSFVGSTPIARYVYGTAAMNGKRAQCFG-GAKNHMIIM------PD----- 282 Query: 144 DFIADADVGLKSIVKEC----GNRCCAFSNSKKTSKAEKESQVQELVELIEKMVQCNEGA 199 AD D +++ G RC A S + + + +LV ++E + Sbjct: 283 ---ADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVESL----RIG 335 Query: 200 YFSDDIYKDTEERLKQREEVLRKIYTDQLNEEIKLV 235 ++D+ K+ E+ +R + + + KLV Sbjct: 336 PYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLV 371 >5XOJ-A nrPDB Length = 182 Score = 27.7 bits (60), Expect = 6.2, Method: Composition-based stats. Identities = 22/86 (25%), Positives = 29/86 (33%) Query: 2 AESEDRSLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLLV 61 A E + ++VLVG G+GK+ L E IA V + + V Sbjct: 6 ANGEVPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFGEIKFDV 65 Query: 62 VDTPGLFDTKESLDTTCKEISRCIIS 87 DT GL D II Sbjct: 66 WDTAGLEKFGGLRDGYYINAQCAIIM 91 >3WYF-A nrPDB Length = 219 Score = 27.7 bits (60), Expect = 6.2, Method: Composition-based stats. Identities = 22/86 (25%), Positives = 29/86 (33%) Query: 2 AESEDRSLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLLV 61 A E + ++VLVG G+GK+ L E IA V + + V Sbjct: 6 ANGEVPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFGEIKFDV 65 Query: 62 VDTPGLFDTKESLDTTCKEISRCIIS 87 DT GL D II Sbjct: 66 WDTAGLEKFGGLRDGYYINAQCAIIM 91 >2J4X-A nrPDB Length = 213 Score = 27.7 bits (60), Expect = 6.2, Method: Composition-based stats. Identities = 27/130 (20%), Positives = 54/130 (41%), Gaps = 11/130 (8%) Query: 113 ALIKAVFGKSAMKHMVILFTRKEELEGQSFHDFIADADVGLKSIVKECGNRCCAFSNSKK 172 + +K ++ K + + T+K G I + + + + N+ + + S Sbjct: 8 SELKNIYMKDVINKTNMKITKK---IGTQL---IFNTNEKTRVWDDDNYNKVISSNVSPA 61 Query: 173 TSKAEKESQVQELVELIEK-MVQCNEGAYFSDDIYKDTEERLKQREEVLRKIYTDQLNEE 231 + KE + ++ LI+ V C E + D T +R E++ IY + E+ Sbjct: 62 QERRFKEEEEVDIYALIKSYSVICKEQYNYVDGGLIKTSDR----EKLDSTIYMNIFGEQ 117 Query: 232 IKLVEEDKHK 241 I L E+ K+K Sbjct: 118 IPLKEQSKYK 127 >5KUT-A nrPDB Length = 189 Score = 27.7 bits (60), Expect = 6.4, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 36/96 (37%), Gaps = 6/96 (6%) Query: 2 AESEDRSLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLLV 61 +++ L +VG G GKSA LG + Q Q + L++ Sbjct: 3 GQTQRSVLLCKVVGACGVGKSAFLQAFLGRGLGHQDTREQPPGYAIDTVQVNGQEKYLIL 62 Query: 62 --VDTPGLFDTKESLDTTCKEISRCIISSCPGPHAI 95 V T GL T SLD TC C++ P + Sbjct: 63 CEVGTDGLLAT--SLDATCD--VACLMFDGSDPKSF 94 >1HEY-A nrPDB Length = 128 Score = 27.7 bits (60), Expect = 6.8, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 1/62 (1%) Query: 6 DRSLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLLVVDTP 65 D+ L+ ++VG G+GKS T +L E F++ A+ K G + + P Sbjct: 2 DKELKFLVVGNGGTGKS-TVRNLLKELGFNNVEDAEDGVDALNKLQAGGYGFVISDWNMP 60 Query: 66 GL 67 + Sbjct: 61 NM 62 >4M9Q-A nrPDB Length = 227 Score = 27.7 bits (60), Expect = 7.0, Method: Composition-based stats. Identities = 45/238 (18%), Positives = 92/238 (38%), Gaps = 40/238 (16%) Query: 7 RSLRIVLVGKTGSGKSATANTILGE--EIFDSRIAAQAVTKNCQKASREWQGRDLLVVDT 64 R + I L+G +GK+ N+I GE + T N + V D Sbjct: 3 RKITIALLGLDNAGKTTLLNSIQGEVDRDTTPTFGFNSTTLN-------EGKYKIEVFDL 55 Query: 65 PGLFDTKESLDTTCKEISRCIISSCPGPHAIVLVLLL---GRYTEEEQKTVALIKAVFGK 121 G + + E+ HAIV V+ GR+ E + +++ F + Sbjct: 56 GGGKNIRGVWKKYLAEV-----------HAIVYVVDAADPGRFEESKMTMAEVLENQFMR 104 Query: 122 SAMKHMVILFTRKEELEGQSFHDFIADADVGLKSI-VKECGNRCCAFSNSKK-TSKAEKE 179 + +F K++L A A +K + + C N F + K + + + Sbjct: 105 D---KPICIFANKQDLPTA------APAAEVVKGLGLATCRNSHNVFPCTAKMPAGQDVD 155 Query: 180 SQVQE----LVELIEKMV--QCNEGAYFSDDIYKDTEERLKQREEVLRKIYTDQLNEE 231 ++++ LV +++ ++++ ++ + K+REE LRK ++L ++ Sbjct: 156 HRLRDGLKWLVGTVDREFGRLDPRVQTEAEEVRQEEARKKKEREERLRKQREERLRQQ 213 >1CP2-A nrPDB Length = 269 Score = 27.7 bits (60), Expect = 7.0, Method: Composition-based stats. Identities = 27/119 (22%), Positives = 44/119 (36%), Gaps = 23/119 (19%) Query: 10 RIVLVGKTGSGKSATANTI------LGEEIFDSRIAAQAVTKNCQKASREWQGRDLLVVD 63 ++ + GK G GKS T + +G+ I +A + + V+D Sbjct: 3 QVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPKADSTRLLLGGLAQKS----VLD 58 Query: 64 TPGLFDTKESLDTTCKE---ISRCIISSCPGP----------HAIVLVLLLGRYTEEEQ 109 T LD+ KE RC+ S P P +I ++ LG YT++ Sbjct: 59 TLREEGEDVELDSILKEGYGGIRCVESGGPEPGVGCAGRGIITSINMLEQLGAYTDDLD 117 >5YOZ-A nrPDB Length = 177 Score = 27.7 bits (60), Expect = 7.0, Method: Composition-based stats. Identities = 30/141 (21%), Positives = 57/141 (40%), Gaps = 22/141 (15%) Query: 5 EDRSLRIVLVGKTGSGKSA-----TANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDL 59 E S +IV++G++G+GKS+ T N L + ++ I A ++K R + Sbjct: 12 EATSAKIVMLGESGAGKSSIALRFTRNEFLANQ--ETTIGAAFLSKTVMIDGRALK---Y 66 Query: 60 LVVDTPGLFDTKESLDTTCKEISRCIISSCPGPHAIVLVLLLGRYTEEEQKTVALIKAVF 119 + DT GL + ++ G LV+ +E +K IK + Sbjct: 67 EIWDTAGL--------ERFRSLAPIYYRGASGA----LVVYDITNSESLKKAQTWIKELR 114 Query: 120 GKSAMKHMVILFTRKEELEGQ 140 + +++L K++L Sbjct: 115 ANADPSLIIVLVGNKKDLGSL 135 >1I33-A nrPDB Length = 360 Score = 27.4 bits (59), Expect = 7.5, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 57/159 (35%), Gaps = 40/159 (25%) Query: 46 NCQKASRE-----WQGRDLL-VVDTPGLFDTKESLDTTCKEISRCIISSCP---GPHAIV 96 C KA R W + V+++ GLF K + K ++ ++ S P G IV Sbjct: 86 KCVKAQRNPADLPWGKLGVDYVIESTGLFTDKLKAEGHIKGGAKKVVISAPASGGAKTIV 145 Query: 97 LVLLLGRYTEEEQKTVA---------------LIKAVFG-KSAMKHMVILFTRKEE-LEG 139 + + Y+ V+ L K FG ++ + + +T ++ ++G Sbjct: 146 MGVNQHEYSPASHHVVSNASCTTNCLAPIVHVLTKENFGIETGLMTTIHSYTATQKTVDG 205 Query: 140 QSFHDFIADADVGLKSIVKECGNRCCAFSNSKKTSKAEK 178 S D+ G R A + T+ A K Sbjct: 206 VSLKDWR--------------GGRAAAVNIIPSTTGAAK 230 >5VH6-A nrPDB Length = 409 Score = 27.4 bits (59), Expect = 7.8, Method: Composition-based stats. Identities = 8/35 (22%), Positives = 18/35 (51%) Query: 41 QAVTKNCQKASREWQGRDLLVVDTPGLFDTKESLD 75 + +T + +W+G + ++DTPG D ++ Sbjct: 62 RGITITSAATTAQWKGYRVNIIDTPGHVDFTVEVE 96 >5DI3-B nrPDB Length = 263 Score = 27.4 bits (59), Expect = 8.3, Method: Composition-based stats. Identities = 45/238 (18%), Positives = 92/238 (38%), Gaps = 40/238 (16%) Query: 7 RSLRIVLVGKTGSGKSATANTILGE--EIFDSRIAAQAVTKNCQKASREWQGRDLLVVDT 64 R + I L+G +GK+ N+I GE + T N + V D Sbjct: 3 RKITIALLGLDNAGKTTLLNSIQGEVDRDTTPTFGFNSTTLN-------EGKYKIEVFDL 55 Query: 65 PGLFDTKESLDTTCKEISRCIISSCPGPHAIVLVLLL---GRYTEEEQKTVALIKAVFGK 121 G + + E+ HAIV V+ GR+ E + +++ F + Sbjct: 56 GGGKNIRGVWKKYLAEV-----------HAIVYVVDAADPGRFEESKMTMAEVLENQFMR 104 Query: 122 SAMKHMVILFTRKEELEGQSFHDFIADADVGLKSI-VKECGNRCCAFSNSKK-TSKAEKE 179 + +F K++L A A +K + + C N F + K + + + Sbjct: 105 D---KPICIFANKQDLPTA------APAAEVVKGLGLATCRNSHNVFPCTAKMPAGQDVD 155 Query: 180 SQVQE----LVELIEKMV--QCNEGAYFSDDIYKDTEERLKQREEVLRKIYTDQLNEE 231 ++++ LV +++ ++++ ++ + K+REE LRK ++L ++ Sbjct: 156 HRLRDGLKWLVGTVDREFGRLDPRVQTEAEEVRQEEARKKKEREERLRKQREERLRQQ 213 >2J1L-A nrPDB Length = 214 Score = 27.4 bits (59), Expect = 8.7, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 1/65 (1%) Query: 2 AESEDRSLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLLV 61 A RS+++VLVG G GK++ + + F + + + L + Sbjct: 28 APPGVRSVKVVLVGDGGCGKTSLL-MVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHI 86 Query: 62 VDTPG 66 DT G Sbjct: 87 WDTAG 91 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.313 0.132 0.342 Lambda K H 0.267 0.0404 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 10,127,345 Number of Sequences: 36641 Number of extensions: 377174 Number of successful extensions: 3060 Number of sequences better than 10.0: 130 Number of HSP's better than 10.0 without gapping: 66 Number of HSP's successfully gapped in prelim test: 192 Number of HSP's that attempted gapping in prelim test: 2822 Number of HSP's gapped (non-prelim): 366 length of query: 300 length of database: 10,336,785 effective HSP length: 97 effective length of query: 203 effective length of database: 6,782,608 effective search space: 1376869424 effective search space used: 1376869424 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 59 (27.4 bits)