BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q8NFU3 (115 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 6BEV-A nrPDB 233 2e-62 3D1P-A nrPDB 62 7e-11 3NTA-A nrPDB 52 7e-08 1TQ1-A nrPDB 50 3e-07 3ICS-A nrPDB 45 9e-06 1H4M-X nrPDB 44 1e-05 3P3A-A nrPDB 41 1e-04 3HZU-A nrPDB 41 1e-04 1UAR-A nrPDB 40 2e-04 4JGT-A nrPDB 38 0.001 6HIW-DT nrPDB 37 0.002 2EG4-A nrPDB 36 0.004 2JTQ-A nrPDB 35 0.006 3AAX-A nrPDB 35 0.009 5WQK-A nrPDB 35 0.009 3UTN-X nrPDB 34 0.011 2WLX-A nrPDB 33 0.037 1URH-A nrPDB 32 0.046 4Z9R-A nrPDB 28 0.82 1YT8-A nrPDB 28 1.1 4I2W-A nrPDB 26 3.5 5JLR-A nrPDB 26 4.3 6GFF-I nrPDB 25 6.8 >6BEV-A nrPDB Length = 135 Score = 233 bits (594), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 115/115 (100%), Positives = 115/115 (100%) Query: 1 MAGAPTVSLPELRSLLASGRARLFDVRSREEAAAGTIPGALNIPVSELESALQMEPAAFQ 60 MAGAPTVSLPELRSLLASGRARLFDVRSREEAAAGTIPGALNIPVSELESALQMEPAAFQ Sbjct: 21 MAGAPTVSLPELRSLLASGRARLFDVRSREEAAAGTIPGALNIPVSELESALQMEPAAFQ 80 Query: 61 ALYSAEKPKLEDEHLVFFCQMGKRGLQATQLARSLGYTGARNYAGAYREWLEKES 115 ALYSAEKPKLEDEHLVFFCQMGKRGLQATQLARSLGYTGARNYAGAYREWLEKES Sbjct: 81 ALYSAEKPKLEDEHLVFFCQMGKRGLQATQLARSLGYTGARNYAGAYREWLEKES 135 >3D1P-A nrPDB Length = 139 Score = 61.6 bits (148), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 1/89 (1%) Query: 23 LFDVRSREEAAAGTIPGALNIPVSELESALQMEPAAFQALYSAEKPKLEDEHLVFFCQMG 82 L DVR E + IP ++N+P A ++P F+ KP E L+F+C G Sbjct: 43 LVDVREPSEYSIVHIPASINVPYRSHPDAFALDPLEFEKQIGIPKPDSAKE-LIFYCASG 101 Query: 83 KRGLQATQLARSLGYTGARNYAGAYREWL 111 KRG +A ++A S GY+ Y G+ +W+ Sbjct: 102 KRGGEAQKVASSHGYSNTSLYPGSMNDWV 130 >3NTA-A nrPDB Length = 574 Score = 51.6 bits (122), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 15/88 (17%) Query: 23 LFDVRSREEAAAGTIPGALNIPVSELESALQMEPAAFQALYSAEKPKLEDEHLVFFCQMG 82 L DVR+ E G + GA+NIPV EL + E PK D+ ++ FCQ+G Sbjct: 489 LLDVRNPGELQNGGLEGAVNIPVDELRDRMH------------ELPK--DKEIIIFCQVG 534 Query: 83 KRGLQATQLARSLGYTGARNYAGAYREW 110 RG A + + GY ARN G YR + Sbjct: 535 LRGNVAYRQLVNNGYR-ARNLIGGYRTY 561 >1TQ1-A nrPDB Length = 129 Score = 49.7 bits (117), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 3/105 (2%) Query: 6 TVSLPELRSLLASGRARLFDVRSREEAAAGTIPGALNIPVSELESALQMEPAAFQALYSA 65 +VS+ LL +G R DVR+ EE + G GA+N+P ++ + F S+ Sbjct: 19 SVSVTVAHDLLLAGH-RYLDVRTPEEFSQGHACGAINVPYMNRGASGMSKNTDFLEQVSS 77 Query: 66 EKPKLEDEHLVFFCQMGKRGLQATQLARSLGYTGARNYAGAYREW 110 + ++++ CQ G R ++AT G+TG ++ G Y W Sbjct: 78 HFG--QSDNIIVGCQSGGRSIKATTDLLHAGFTGVKDIVGGYSAW 120 >3ICS-A nrPDB Length = 588 Score = 44.7 bits (104), Expect = 9e-06, Method: Composition-based stats. Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 16/103 (15%) Query: 6 TVSLPELRSLLASGRARLFDVRSREEAAAGTIPGALNIPVSELESALQMEPAAFQALYSA 65 TV E+ ++ +G L DVR E G I G++NIP+ EL L+ P Sbjct: 490 TVQWHEIDRIVENG-GYLIDVREPNELKQGMIKGSINIPLDELRDRLEEVPV-------- 540 Query: 66 EKPKLEDEHLVFFCQMGKRGLQATQLARSLGYTGARNYAGAYR 108 D+ + CQ+G RG A ++ GY +N G ++ Sbjct: 541 ------DKDIYITCQLGMRGYVAARMLMEKGYK-VKNVDGGFK 576 >1H4M-X nrPDB Length = 271 Score = 44.3 bits (103), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 19/120 (15%) Query: 5 PTVSLPELRSLLASGRARLFDVRSREE--------AAAGTIPGALNIPVSELESALQMEP 56 PT S L L + ++D RS +E A G IPGA+N E M+P Sbjct: 147 PTASRDYLLGRLGAADLAIWDARSPQEYRGEKVLAAKGGHIPGAVN-----FEWTAAMDP 201 Query: 57 AAFQALYSAEKPKLE------DEHLVFFCQMGKRGLQATQLARSLGYTGARNYAGAYREW 110 + + + +LE D+ +V CQ R +A++LGY + YAG++ EW Sbjct: 202 SRALRIRTDIAGRLEELGITPDKEIVTHCQTHHRSGLTYLIAKALGYPRVKGYAGSWGEW 261 >3P3A-A nrPDB Length = 320 Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 22/111 (19%) Query: 19 GRARLFDVRSREEAAA----------------GTIPGALNIPVSE--LESALQMEPAAFQ 60 G+ L DVRS +E G IP A+++P S+ + A + Sbjct: 192 GKEPLIDVRSPQEYTGERTHMPDYPEEGALRGGHIPTAVSVPWSKAAYDDGRFRARAELE 251 Query: 61 ALYSAEKPKLEDEHLVFFCQMGKRGLQAT-QLARSLGYTGARNYAGAYREW 110 +Y KP D+ + +C++G+R L LG+ RNY G++ EW Sbjct: 252 EIYGFVKP---DDKPIVYCRIGERSSHTWFVLTYLLGHPNVRNYDGSWTEW 299 >3HZU-A nrPDB Length = 318 Score = 40.8 bits (94), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 44/107 (41%), Gaps = 22/107 (20%) Query: 23 LFDVRSREEAA----------------AGTIPGALNIPVSEL--ESALQMEPAAFQALYS 64 L DVRS EE AG IP A++IP + ES + LY Sbjct: 195 LIDVRSPEEYTGKRTHMPDYPEEGALRAGHIPTAVHIPWGKAADESGRFRSREELERLYD 254 Query: 65 AEKPKLEDEHLVFFCQMGKRGLQAT-QLARSLGYTGARNYAGAYREW 110 P D+ V +C++G+R L LG RNY G++ EW Sbjct: 255 FINP---DDQTVVYCRIGERSSHTWFVLTHLLGKADVRNYDGSWTEW 298 >1UAR-A nrPDB Length = 285 Score = 40.4 bits (93), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 20/114 (17%) Query: 16 LASGRARLFDVRSREEAA----------------AGTIPGALNIPVSELESALQMEPAA- 58 + G+ L DVRS +E AG IPGA NIP ++ + +A Sbjct: 160 VKEGKGALVDVRSPQEYRGELTHMPDYPQEGALRAGHIPGAKNIPWAKAVNPDGTFKSAE 219 Query: 59 -FQALYSAEKPKLEDEHLVFFCQMGKRGLQATQLARSL-GYTGARNYAGAYREW 110 +ALY +D+ +V +C++ +R + + + L GY +NY G++ EW Sbjct: 220 ELRALYEPLG-ITKDKDIVVYCRIAERSSHSWFVLKYLLGYPHVKNYDGSWTEW 272 >4JGT-A nrPDB Length = 299 Score = 37.7 bits (86), Expect = 0.001, Method: Compositional matrix adjust. Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 3/96 (3%) Query: 17 ASGRARLFDVRSREEAAAGTIPGALNIPVSEL--ESALQMEPAAFQALYSAEKPKLEDEH 74 A+GR R + R+ G IPG +NIP ++ + L+ P + L+ +K L + Sbjct: 195 ATGRFRGTEPEPRDGIEPGHIPGTVNIPFTDFLSQEGLEKSPEEIRHLFQEKKVDLS-KP 253 Query: 75 LVFFCQMGKRGLQATQLARSLGYTGARNYAGAYREW 110 LV C G A G Y G++ EW Sbjct: 254 LVATCGSGVTACHVALGAYLCGKPDVPIYDGSWVEW 289 >6HIW-DT nrPDB Length = 247 Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/89 (24%), Positives = 36/89 (40%), Gaps = 1/89 (1%) Query: 21 ARLFDVRSREEAAAGTIPGALNIPVSELESALQMEPAAFQALYSAEKPKLEDEHLVFFCQ 80 + D R+ + +P +L +P E+E ALQ+ F +Y KP D+ ++ Sbjct: 81 THIIDCRTSTQKMHRWVPHSLWLPRDEVEYALQLSADEFLDMYGFRKPDKSDD-VILLSH 139 Query: 81 MGKRGLQATQLARSLGYTGARNYAGAYRE 109 G QA + + NY G E Sbjct: 140 NGIYSEQAGWEWKKQFFQHVYNYRGGTNE 168 >2EG4-A nrPDB Length = 230 Score = 35.8 bits (81), Expect = 0.004, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 42/101 (41%), Gaps = 20/101 (19%) Query: 23 LFDVRSREE----------AAAGTIPGALNIPVSELESALQMEPAAFQALYSAEKPKLED 72 L DVRS EE G IPG+ N P+ L + P + Sbjct: 134 LLDVRSPEEFQGKVHPPCCPRGGRIPGSKNAPLE-----LFLSPEGLLERLGLQP----G 184 Query: 73 EHLVFFCQMGKRGLQATQLARSLGYTGARNYAGAYREWLEK 113 + + +C G R A + RSLG ARNY G+ EWL++ Sbjct: 185 QEVGVYCHSGARSAVAFFVLRSLGVR-ARNYLGSMHEWLQE 224 >2JTQ-A nrPDB Length = 85 Score = 35.4 bits (80), Expect = 0.006, Method: Compositional matrix adjust. Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 12/82 (14%) Query: 24 FDVRSREEAAAGTIPGALNIPVSELESALQMEPAAFQALYSAEKPKLEDEHLVFFCQMGK 83 DVR E+ + GA+NIP+ E++ + + P D + +C G+ Sbjct: 5 IDVRVPEQYQQEHVQGAINIPLKEVKERI-----------ATAVPDKNDT-VKVYCNAGR 52 Query: 84 RGLQATQLARSLGYTGARNYAG 105 + QA ++ +GYT N G Sbjct: 53 QSGQAKEILSEMGYTHVENAGG 74 >3AAX-A nrPDB Length = 277 Score = 34.7 bits (78), Expect = 0.009, Method: Compositional matrix adjust. Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 20/115 (17%) Query: 15 LLASGRARLFDVRSREEAAA----------------GTIPGALNIPVSEL--ESALQMEP 56 L A L DVRS +E + G IPGA+N+P S E Sbjct: 152 LAAINVKNLIDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGAINVPWSRAANEDGTFKSD 211 Query: 57 AAFQALYSAEKPKLEDEHLVFFCQMGKRGLQATQLARS-LGYTGARNYAGAYREW 110 LY A+ + + +C++G+R + R LG+ +NY G++ E+ Sbjct: 212 EELAKLY-ADAGLDNSKETIAYCRIGERSSHTWFVLRELLGHQNVKNYDGSWTEY 265 >5WQK-A nrPDB Length = 293 Score = 34.7 bits (78), Expect = 0.009, Method: Compositional matrix adjust. Identities = 27/96 (28%), Positives = 40/96 (41%), Gaps = 3/96 (3%) Query: 17 ASGRARLFDVRSREEAAAGTIPGALNIPVSEL--ESALQMEPAAFQALYSAEKPKLEDEH 74 A+GR + R+ G IPG++NIP +E L+ P + L+ +K L Sbjct: 181 AAGRFQGTQPEPRDGIEPGHIPGSVNIPFTEFLTNEGLEKSPEEIKRLFKEKKVDLSKP- 239 Query: 75 LVFFCQMGKRGLQATQLARSLGYTGARNYAGAYREW 110 LV C G A G + Y G++ EW Sbjct: 240 LVATCGSGVTASHVVLGAFLSGKSDVPVYDGSWVEW 275 >3UTN-X nrPDB Length = 327 Score = 34.3 bits (77), Expect = 0.011, Method: Compositional matrix adjust. Identities = 33/131 (25%), Positives = 52/131 (39%), Gaps = 24/131 (18%) Query: 7 VSLPELRSLLASG----RARLFDVRS-----------REEAAAGTIPGALNIPV-SELES 50 V E+ L+ SG + FD RS R + +G IPG +P S L+ Sbjct: 186 VDYEEMFQLVKSGELAKKFNAFDARSLGRFEGTEPEPRSDIPSGHIPGTQPLPYGSLLDP 245 Query: 51 ALQMEPAAFQALYSAEKPKLEDEHL--------VFFCQMGKRGLQATQLARSLGYTGARN 102 + P A +A+++ + L+D H + C G G+ G R Sbjct: 246 ETKTYPEAGEAIHATLEKALKDFHCTLDPSKPTICSCGTGVSGVIIKTALELAGVPNVRL 305 Query: 103 YAGAYREWLEK 113 Y G++ EW+ K Sbjct: 306 YDGSWTEWVLK 316 >2WLX-A nrPDB Length = 423 Score = 32.7 bits (73), Expect = 0.037, Method: Compositional matrix adjust. Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Query: 61 ALYSAEKPKLEDEHLVFFCQMGKRGLQATQLARSLGYTGARNYAGAYREW 110 A++ A K E + + F+C G R + AR++G+ Y G + EW Sbjct: 348 AMWKAWNIKPE-QQVSFYCGTGWRASETFMYARAMGWKNVSVYDGGWYEW 396 >1URH-A nrPDB Length = 280 Score = 32.3 bits (72), Expect = 0.046, Method: Compositional matrix adjust. Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 12/82 (14%) Query: 35 GTIPGALNIPVS------ELESALQMEPAAFQALYSAEKPKLEDEHLVFFCQMGKRGLQA 88 G IPGALN+P + EL++ +++ F S +KP ++ C G Sbjct: 193 GHIPGALNVPWTELVREGELKTTDELDAIFFGRGVSYDKP------IIVSCGSGVTAAVV 246 Query: 89 TQLARSLGYTGARNYAGAYREW 110 +L + Y GA+ EW Sbjct: 247 LLALATLDVPNVKLYDGAWSEW 268 >4Z9R-A nrPDB Length = 547 Score = 28.1 bits (61), Expect = 0.82, Method: Compositional matrix adjust. Identities = 16/57 (28%), Positives = 29/57 (50%) Query: 33 AAGTIPGALNIPVSELESALQMEPAAFQALYSAEKPKLEDEHLVFFCQMGKRGLQAT 89 AAG IP + + +++AL P AF ++S + LE + F + R ++A+ Sbjct: 133 AAGLIPSRVEAAIKRIQAALPNGPYAFNLIHSPSEQALERGSVELFLKHQVRTVEAS 189 >1YT8-A nrPDB Length = 539 Score = 27.7 bits (60), Expect = 1.1, Method: Compositional matrix adjust. Identities = 15/45 (33%), Positives = 28/45 (62%), Gaps = 1/45 (2%) Query: 5 PTVSLPELRSLL-ASGRARLFDVRSREEAAAGTIPGALNIPVSEL 48 P+++ E+++LL A A + D R +E +IPG +++P +EL Sbjct: 130 PSLAAEEVQALLDARAEAVILDARRFDEYQTMSIPGGISVPGAEL 174 Score = 26.6 bits (57), Expect = 2.9, Method: Compositional matrix adjust. Identities = 12/26 (46%), Positives = 17/26 (65%) Query: 23 LFDVRSREEAAAGTIPGALNIPVSEL 48 L DVR+ EE AG +PG+ + P +L Sbjct: 285 LLDVRTPEEYEAGHLPGSRSTPGGQL 310 >4I2W-A nrPDB Length = 961 Score = 26.2 bits (56), Expect = 3.5, Method: Compositional matrix adjust. Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 3/44 (6%) Query: 45 VSELESALQMEPA---AFQALYSAEKPKLEDEHLVFFCQMGKRG 85 VS+ E A+ M +ALY +E P ++ LV C++G G Sbjct: 468 VSKHERAINMLKVGIPVLRALYDSEDPTVKVRALVGLCKIGAAG 511 >5JLR-A nrPDB Length = 396 Score = 25.8 bits (55), Expect = 4.3, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 7/78 (8%) Query: 5 PTVSLPELRSLLASGR---ARLFDVRSREEAAAGT----IPGALNIPVSELESALQMEPA 57 P + P ++ GR A F +RE AA G I G + PV LE + + P Sbjct: 86 PIIREPSTHTIFVLGRPITAAAFGAVAREVAALGVNIDLIRGVSDYPVIGLELRVSVPPG 145 Query: 58 AFQALYSAEKPKLEDEHL 75 A AL +A +EH+ Sbjct: 146 ADGALRTALNRVSSEEHV 163 >6GFF-I nrPDB Length = 618 Score = 25.0 bits (53), Expect = 6.8, Method: Compositional matrix adjust. Identities = 17/58 (29%), Positives = 22/58 (37%) Query: 54 MEPAAFQALYSAEKPKLEDEHLVFFCQMGKRGLQATQLARSLGYTGARNYAGAYREWL 111 ++P AFQAL E L L + GL SL +G Y+G L Sbjct: 69 LQPGAFQALTHLEHLSLAHNRLAMATALSAGGLGPLPRVTSLDLSGNSLYSGLLERLL 126 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 6BEV-A nrPDB 156 3e-39 1TQ1-A nrPDB 113 1e-26 3D1P-A nrPDB 109 3e-25 1H4M-X nrPDB 108 5e-25 1UAR-A nrPDB 107 2e-24 4JGT-A nrPDB 106 2e-24 6HIW-DT nrPDB 106 2e-24 3P3A-A nrPDB 104 7e-24 3HZU-A nrPDB 101 6e-23 3ICS-A nrPDB 100 1e-22 3NTA-A nrPDB 83 3e-17 Sequences not found previously or not previously below threshold: 5WQK-A nrPDB 95 5e-21 3AAX-A nrPDB 93 4e-20 1BOH-A nrPDB 87 2e-18 1URH-A nrPDB 76 4e-15 3UTN-X nrPDB 67 2e-12 2EG4-A nrPDB 62 5e-11 2JTQ-A nrPDB 59 5e-10 1QB0-A nrPDB 51 9e-08 4WH9-A nrPDB 50 2e-07 1OKG-A nrPDB 48 7e-07 1C25-A nrPDB 48 1e-06 1GN0-A nrPDB 47 1e-06 2WLX-A nrPDB 46 4e-06 1YT8-A nrPDB 41 1e-04 3OP3-A nrPDB 40 2e-04 5XC2-A nrPDB 30 0.31 3QBO-A nrPDB 29 0.32 5I92-A nrPDB 29 0.45 1R9W-A nrPDB 28 0.86 3QM2-A nrPDB 28 1.0 3TG3-A nrPDB 28 1.2 2VSW-A nrPDB 28 1.2 1T3K-A nrPDB 28 1.2 1BJO-A nrPDB 27 2.1 5ND5-A nrPDB 27 2.5 4RZQ-A nrPDB 26 3.1 >6BEV-A nrPDB Length = 135 Score = 156 bits (393), Expect = 3e-39, Method: Composition-based stats. Identities = 115/115 (100%), Positives = 115/115 (100%) Query: 1 MAGAPTVSLPELRSLLASGRARLFDVRSREEAAAGTIPGALNIPVSELESALQMEPAAFQ 60 MAGAPTVSLPELRSLLASGRARLFDVRSREEAAAGTIPGALNIPVSELESALQMEPAAFQ Sbjct: 21 MAGAPTVSLPELRSLLASGRARLFDVRSREEAAAGTIPGALNIPVSELESALQMEPAAFQ 80 Query: 61 ALYSAEKPKLEDEHLVFFCQMGKRGLQATQLARSLGYTGARNYAGAYREWLEKES 115 ALYSAEKPKLEDEHLVFFCQMGKRGLQATQLARSLGYTGARNYAGAYREWLEKES Sbjct: 81 ALYSAEKPKLEDEHLVFFCQMGKRGLQATQLARSLGYTGARNYAGAYREWLEKES 135 >1TQ1-A nrPDB Length = 129 Score = 113 bits (283), Expect = 1e-26, Method: Composition-based stats. Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 3/105 (2%) Query: 6 TVSLPELRSLLASGRARLFDVRSREEAAAGTIPGALNIPVSELESALQMEPAAFQALYSA 65 +VS+ LL +G R DVR+ EE + G GA+N+P ++ + F S+ Sbjct: 19 SVSVTVAHDLLLAGH-RYLDVRTPEEFSQGHACGAINVPYMNRGASGMSKNTDFLEQVSS 77 Query: 66 EKPKLEDEHLVFFCQMGKRGLQATQLARSLGYTGARNYAGAYREW 110 + ++++ CQ G R ++AT G+TG ++ G Y W Sbjct: 78 HFG--QSDNIIVGCQSGGRSIKATTDLLHAGFTGVKDIVGGYSAW 120 >3D1P-A nrPDB Length = 139 Score = 109 bits (272), Expect = 3e-25, Method: Composition-based stats. Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 1/89 (1%) Query: 23 LFDVRSREEAAAGTIPGALNIPVSELESALQMEPAAFQALYSAEKPKLEDEHLVFFCQMG 82 L DVR E + IP ++N+P A ++P F+ KP + L+F+C G Sbjct: 43 LVDVREPSEYSIVHIPASINVPYRSHPDAFALDPLEFEKQIGIPKPDSA-KELIFYCASG 101 Query: 83 KRGLQATQLARSLGYTGARNYAGAYREWL 111 KRG +A ++A S GY+ Y G+ +W+ Sbjct: 102 KRGGEAQKVASSHGYSNTSLYPGSMNDWV 130 >1H4M-X nrPDB Length = 271 Score = 108 bits (270), Expect = 5e-25, Method: Composition-based stats. Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 19/120 (15%) Query: 5 PTVSLPELRSLLASGRARLFDVRSREEA--------AAGTIPGALNIPVSELESALQMEP 56 PT S L L + ++D RS +E G IPGA+N E M+P Sbjct: 147 PTASRDYLLGRLGAADLAIWDARSPQEYRGEKVLAAKGGHIPGAVN-----FEWTAAMDP 201 Query: 57 AAFQALYSAEKPKLE------DEHLVFFCQMGKRGLQATQLARSLGYTGARNYAGAYREW 110 + + + +LE D+ +V CQ R +A++LGY + YAG++ EW Sbjct: 202 SRALRIRTDIAGRLEELGITPDKEIVTHCQTHHRSGLTYLIAKALGYPRVKGYAGSWGEW 261 Score = 35.2 bits (79), Expect = 0.006, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 44/109 (40%), Gaps = 6/109 (5%) Query: 12 LRSLLASGRARLFDVRSREEAAAGTIPGA--LNIPVSELES----ALQMEPAAFQALYSA 65 L++ L++ L D+ S A G IPGA ++ ++L LQ ++L+ Sbjct: 16 LQARLSAPELILVDLTSAARYAEGHIPGARFVDPKRTQLGQPPAPGLQPPREQLESLFGE 75 Query: 66 EKPKLEDEHLVFFCQMGKRGLQATQLARSLGYTGARNYAGAYREWLEKE 114 + E ++V+ + G + L +G G WL ++ Sbjct: 76 LGHRPEAVYVVYDDEGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLAED 124 >1UAR-A nrPDB Length = 285 Score = 107 bits (266), Expect = 2e-24, Method: Composition-based stats. Identities = 30/114 (26%), Positives = 48/114 (42%), Gaps = 20/114 (17%) Query: 16 LASGRARLFDVRSREEAAA----------------GTIPGALNIPVSEL--ESALQMEPA 57 + G+ L DVRS +E G IPGA NIP ++ Sbjct: 160 VKEGKGALVDVRSPQEYRGELTHMPDYPQEGALRAGHIPGAKNIPWAKAVNPDGTFKSAE 219 Query: 58 AFQALYSAEKPKLEDEHLVFFCQMGKRGLQATQLA-RSLGYTGARNYAGAYREW 110 +ALY +D+ +V +C++ +R + + LGY +NY G++ EW Sbjct: 220 ELRALY-EPLGITKDKDIVVYCRIAERSSHSWFVLKYLLGYPHVKNYDGSWTEW 272 Score = 39.8 bits (91), Expect = 3e-04, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 36/113 (31%), Gaps = 7/113 (6%) Query: 7 VSLPELRSLLASGRARLFDVRSR-EEAAAGTIPGALNIPVSELES----ALQMEPAAFQA 61 VS ++ L + R+ +V G IPGA I + F Sbjct: 10 VSTDWVQEHLEDPKVRVLEVDEDILLYDTGHIPGAQKIDWQRDFWDPVVRDFISEEEFAK 69 Query: 62 LYSAEKPKLEDEHLVFFC-QMGKRGLQATQLARSLGYTGARNYAGAYREWLEK 113 L D +V + + A + G+ R G ++W+E+ Sbjct: 70 LM-ERLGISNDTTVVLYGDKNNWWAAYAFWFFKYNGHKDVRLMNGGRQKWVEE 121 >4JGT-A nrPDB Length = 299 Score = 106 bits (264), Expect = 2e-24, Method: Composition-based stats. Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 3/96 (3%) Query: 17 ASGRARLFDVRSREEAAAGTIPGALNIPVSEL--ESALQMEPAAFQALYSAEKPKLEDEH 74 A+GR R + R+ G IPG +NIP ++ + L+ P + L+ +K L + Sbjct: 195 ATGRFRGTEPEPRDGIEPGHIPGTVNIPFTDFLSQEGLEKSPEEIRHLFQEKKVDLS-KP 253 Query: 75 LVFFCQMGKRGLQATQLARSLGYTGARNYAGAYREW 110 LV C G A G Y G++ EW Sbjct: 254 LVATCGSGVTACHVALGAYLCGKPDVPIYDGSWVEW 289 Score = 36.7 bits (83), Expect = 0.002, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 29/93 (31%), Gaps = 8/93 (8%) Query: 29 REEAAAGTIPGALNIPVSELESAL-----QMEPAAFQALYSAEKPKLEDEHLVFFCQM-- 81 R E IPGA + + + A A Y+ H+V + Sbjct: 56 RREFEERHIPGAAFFDIDQCSDRTSPYDHMLPGAEHFAEYAGRLGVGAATHVVIYDASDQ 115 Query: 82 GKRGL-QATQLARSLGYTGARNYAGAYREWLEK 113 G + + R+ G+ G R WL + Sbjct: 116 GLYSAPRVWWMFRAFGHHAVSLLDGGLRHWLRQ 148 >6HIW-DT nrPDB Length = 247 Score = 106 bits (264), Expect = 2e-24, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 36/89 (40%), Gaps = 1/89 (1%) Query: 21 ARLFDVRSREEAAAGTIPGALNIPVSELESALQMEPAAFQALYSAEKPKLEDEHLVFFCQ 80 + D R+ + +P +L +P E+E ALQ+ F +Y KP D+ ++ Sbjct: 81 THIIDCRTSTQKMHRWVPHSLWLPRDEVEYALQLSADEFLDMYGFRKPDKSDD-VILLSH 139 Query: 81 MGKRGLQATQLARSLGYTGARNYAGAYRE 109 G QA + + NY G E Sbjct: 140 NGIYSEQAGWEWKKQFFQHVYNYRGGTNE 168 >3P3A-A nrPDB Length = 320 Score = 104 bits (260), Expect = 7e-24, Method: Composition-based stats. Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 22/111 (19%) Query: 19 GRARLFDVRSREEAAA----------------GTIPGALNIPVSE--LESALQMEPAAFQ 60 G+ L DVRS +E G IP A+++P S+ + A + Sbjct: 192 GKEPLIDVRSPQEYTGERTHMPDYPEEGALRGGHIPTAVSVPWSKAAYDDGRFRARAELE 251 Query: 61 ALYSAEKPKLEDEHLVFFCQMGKRGLQATQLA-RSLGYTGARNYAGAYREW 110 +Y KP D+ + +C++G+R + LG+ RNY G++ EW Sbjct: 252 EIYGFVKP---DDKPIVYCRIGERSSHTWFVLTYLLGHPNVRNYDGSWTEW 299 Score = 44.4 bits (103), Expect = 1e-05, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 34/100 (34%), Gaps = 7/100 (7%) Query: 19 GRARLFDVRSREE---AAAGTIPGALNIPV-SELESALQME--PAAFQALYSAEKPKLED 72 GR L V S E+ G IPGA+ I ++L + A K D Sbjct: 53 GRPGLVIVESDEDVLLYDTGHIPGAVKIDWHTDLNDPAVRDYINGEQFAALMDRKGVTRD 112 Query: 73 EHLVFFC-QMGKRGLQATQLARSLGYTGARNYAGAYREWL 111 + +V + + A + G+ R G W+ Sbjct: 113 DTVVIYGDKSNWWAAYAMWVFHLFGHPDVRLLDGGRDLWV 152 >3HZU-A nrPDB Length = 318 Score = 101 bits (252), Expect = 6e-23, Method: Composition-based stats. Identities = 37/134 (27%), Positives = 51/134 (38%), Gaps = 29/134 (21%) Query: 3 GAPTVSLPEL------RSLLAS-GRARLFDVRSREEAAA----------------GTIPG 39 G P V + +LA G L DVRS EE G IP Sbjct: 168 GYPVVQRNDAPIRAFRDDVLAILGAQPLIDVRSPEEYTGKRTHMPDYPEEGALRAGHIPT 227 Query: 40 ALNIPVSEL--ESALQMEPAAFQALYSAEKPKLEDEHLVFFCQMGKRGLQATQLA-RSLG 96 A++IP + ES + LY P D+ V +C++G+R + LG Sbjct: 228 AVHIPWGKAADESGRFRSREELERLYDFINP---DDQTVVYCRIGERSSHTWFVLTHLLG 284 Query: 97 YTGARNYAGAYREW 110 RNY G++ EW Sbjct: 285 KADVRNYDGSWTEW 298 Score = 39.4 bits (90), Expect = 4e-04, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 27/84 (32%), Gaps = 4/84 (4%) Query: 32 AAAGTIPGALNIPV-SELESALQME--PAAFQALYSAEKPKLEDEHLVFFC-QMGKRGLQ 87 G IPGA+ I ++L + A K D+ +V + + Sbjct: 68 YDVGHIPGAVKIDWHTDLNDPRVRDYINGEQFAELMDRKGIARDDTVVIYGDKSNWWAAY 127 Query: 88 ATQLARSLGYTGARNYAGAYREWL 111 A + G+ R G WL Sbjct: 128 ALWVFTLFGHADVRLLNGGRDLWL 151 >3ICS-A nrPDB Length = 588 Score = 100 bits (249), Expect = 1e-22, Method: Composition-based stats. Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 16/105 (15%) Query: 6 TVSLPELRSLLASGRARLFDVRSREEAAAGTIPGALNIPVSELESALQMEPAAFQALYSA 65 TV E+ ++ +G L DVR E G I G++NIP+ EL L+ P Sbjct: 490 TVQWHEIDRIVENG-GYLIDVREPNELKQGMIKGSINIPLDELRDRLEEVPV-------- 540 Query: 66 EKPKLEDEHLVFFCQMGKRGLQATQLARSLGYTGARNYAGAYREW 110 D+ + CQ+G RG A ++ GY +N G ++ + Sbjct: 541 ------DKDIYITCQLGMRGYVAARMLMEKGYK-VKNVDGGFKLY 578 >5WQK-A nrPDB Length = 293 Score = 95.3 bits (235), Expect = 5e-21, Method: Composition-based stats. Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 3/96 (3%) Query: 17 ASGRARLFDVRSREEAAAGTIPGALNIPVSEL--ESALQMEPAAFQALYSAEKPKLEDEH 74 A+GR + R+ G IPG++NIP +E L+ P + L+ +K L + Sbjct: 181 AAGRFQGTQPEPRDGIEPGHIPGSVNIPFTEFLTNEGLEKSPEEIKRLFKEKKVDLS-KP 239 Query: 75 LVFFCQMGKRGLQATQLARSLGYTGARNYAGAYREW 110 LV C G A G + Y G++ EW Sbjct: 240 LVATCGSGVTASHVVLGAFLSGKSDVPVYDGSWVEW 275 Score = 36.4 bits (82), Expect = 0.003, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 30/95 (31%), Gaps = 12/95 (12%) Query: 29 REEAAAGTIPGALNIPVSELESALQMEPAAFQ-------ALYSAEKPKLEDEHLVFFCQM 81 R E IPGA + S+ P A Y+ H+V + Sbjct: 42 RREFEERHIPGAAFFDID--RSSDHTSPYDHMLPNATHFADYAGSLGVSAATHVVIYDGS 99 Query: 82 --GKRGL-QATQLARSLGYTGARNYAGAYREWLEK 113 G + + R+ G+ G +R WL + Sbjct: 100 DQGLYSAPRVWWMFRAFGHHSVSLLDGGFRHWLNQ 134 >3AAX-A nrPDB Length = 277 Score = 92.6 bits (228), Expect = 4e-20, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 20/107 (18%) Query: 23 LFDVRSREEAA----------------AGTIPGALNIPVSEL--ESALQMEPAAFQALYS 64 L DVRS +E + G IPGA+N+P S E LY+ Sbjct: 160 LIDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGAINVPWSRAANEDGTFKSDEELAKLYA 219 Query: 65 AEKPKLEDEHLVFFCQMGKRGLQATQLAR-SLGYTGARNYAGAYREW 110 + + +C++G+R + R LG+ +NY G++ E+ Sbjct: 220 DAGLDNS-KETIAYCRIGERSSHTWFVLRELLGHQNVKNYDGSWTEY 265 Score = 39.8 bits (91), Expect = 3e-04, Method: Composition-based stats. Identities = 18/109 (16%), Positives = 36/109 (33%), Gaps = 5/109 (4%) Query: 7 VSLPELRSLLASGRARLFDV-RSREEAAAGTIPGALNIPV-SELES---ALQMEPAAFQA 61 VS S L + + +V I GA+ + ++L+ ++ F Sbjct: 8 VSADWAESNLHAPKVVFVEVDEDTSAYDRDHIAGAIKLDWRTDLQDPVKRDFVDAQQFSK 67 Query: 62 LYSAEKPKLEDEHLVFFCQMGKRGLQATQLARSLGYTGARNYAGAYREW 110 L S ED +++ A + G+ + G ++W Sbjct: 68 LLSERGIANEDTVILYGGNNNWFAAYAYWYFKLYGHEKVKLLDGGRKKW 116 >1BOH-A nrPDB Length = 296 Score = 87.2 bits (214), Expect = 2e-18, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 46/120 (38%), Gaps = 15/120 (12%) Query: 8 SLPELRSLLASGRARLFDVRSREEAAA------------GTIPGALNIPVSEL--ESALQ 53 + ++ L S R +L D R++ G I G++N+P E + Sbjct: 163 TYEQVLENLESKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTEDGFE 222 Query: 54 MEPAAFQALYSAEKPKLEDEHLVFFCQMGKRGLQATQLARSLGYTGARNYAGAYREWLEK 113 P +A++ A+K L + L+ C+ G A G Y G++ EW + Sbjct: 223 KSPEELRAMFEAKKVDLT-KPLIATCRKGVTACHIALAAYLCGKPDVAIYDGSWFEWFHR 281 Score = 36.4 bits (82), Expect = 0.003, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 31/95 (32%), Gaps = 8/95 (8%) Query: 27 RSREEAAAGTIPGALNIPVSELESAL-----QMEPAAFQALYSAEKPKLEDEHLVFFCQM 81 +R+E +PGA + E + A A Y D H+V + Sbjct: 42 EARKEYLERHVPGASFFDIEECRDKASPYEVMLPSEAGFADYVGSLGISNDTHVVVYDGD 101 Query: 82 GKRGLQA---TQLARSLGYTGARNYAGAYREWLEK 113 A + R G+ G +R WL++ Sbjct: 102 DLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKE 136 >3NTA-A nrPDB Length = 574 Score = 82.6 bits (202), Expect = 3e-17, Method: Composition-based stats. Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 15/88 (17%) Query: 23 LFDVRSREEAAAGTIPGALNIPVSELESALQMEPAAFQALYSAEKPKLEDEHLVFFCQMG 82 L DVR+ E G + GA+NIPV EL + P +D+ ++ FCQ+G Sbjct: 489 LLDVRNPGELQNGGLEGAVNIPVDELRDRMHELP--------------KDKEIIIFCQVG 534 Query: 83 KRGLQATQLARSLGYTGARNYAGAYREW 110 RG A + + GY ARN G YR + Sbjct: 535 LRGNVAYRQLVNNGY-RARNLIGGYRTY 561 >1URH-A nrPDB Length = 280 Score = 75.7 bits (184), Expect = 4e-15, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 32/84 (38%) Query: 27 RSREEAAAGTIPGALNIPVSELESALQMEPAAFQALYSAEKPKLEDEHLVFFCQMGKRGL 86 R G IPGALN+P +EL +++ + D+ ++ C G Sbjct: 185 EPRPGLRRGHIPGALNVPWTELVREGELKTTDELDAIFFGRGVSYDKPIIVSCGSGVTAA 244 Query: 87 QATQLARSLGYTGARNYAGAYREW 110 +L + Y GA+ EW Sbjct: 245 VVLLALATLDVPNVKLYDGAWSEW 268 Score = 39.4 bits (90), Expect = 3e-04, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 30/87 (34%), Gaps = 6/87 (6%) Query: 30 EEAAAGTIPGALNIPVSELES-----ALQMEPAAFQALYSAEKPKLEDEHLVFFCQMGKR 84 +E G IPGA+ + L + A+ E +D+HL+ + + Sbjct: 39 QEYLNGHIPGAVFFDIEALSDHTSPLPHMLPRPETFAVAMRELGVNQDKHLIVYDEGNLF 98 Query: 85 GL-QATQLARSLGYTGARNYAGAYREW 110 +A + R+ G G W Sbjct: 99 SAPRAWWMLRTFGVEKVSILGGGLAGW 125 >3UTN-X nrPDB Length = 327 Score = 67.2 bits (162), Expect = 2e-12, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 40/104 (38%), Gaps = 9/104 (8%) Query: 19 GRARLFDVRSREEAAAGTIPGALNIPVSELESALQME-PAAFQALYSAEKPKLED----- 72 GR + R + +G IPG +P L P A +A+++ + L+D Sbjct: 213 GRFEGTEPEPRSDIPSGHIPGTQPLPYGSLLDPETKTYPEAGEAIHATLEKALKDFHCTL 272 Query: 73 ---EHLVFFCQMGKRGLQATQLARSLGYTGARNYAGAYREWLEK 113 + + C G G+ G R Y G++ EW+ K Sbjct: 273 DPSKPTICSCGTGVSGVIIKTALELAGVPNVRLYDGSWTEWVLK 316 >2EG4-A nrPDB Length = 230 Score = 62.2 bits (149), Expect = 5e-11, Method: Composition-based stats. Identities = 32/107 (29%), Positives = 44/107 (41%), Gaps = 20/107 (18%) Query: 17 ASGRARLFDVRSREEAAA----------GTIPGALNIPVSELESALQMEPAAFQALYSAE 66 A+ L DVRS EE G IPG+ N P+ L + P + Sbjct: 128 AARHPLLLDVRSPEEFQGKVHPPCCPRGGRIPGSKNAPLE-----LFLSPEGLLERLGLQ 182 Query: 67 KPKLEDEHLVFFCQMGKRGLQATQLARSLGYTGARNYAGAYREWLEK 113 + + +C G R A + RSLG ARNY G+ EWL++ Sbjct: 183 PG----QEVGVYCHSGARSAVAFFVLRSLG-VRARNYLGSMHEWLQE 224 Score = 29.4 bits (64), Expect = 0.35, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 18/43 (41%), Gaps = 4/43 (9%) Query: 20 RARLFDVRSREEAAAGTIPGALNI----PVSELESALQMEPAA 58 A L D R R AG +PGA ++ P L +++ Sbjct: 6 DAVLVDTRPRPAYEAGHLPGARHLDLSAPKLRLREEAELKALE 48 >2JTQ-A nrPDB Length = 85 Score = 58.7 bits (140), Expect = 5e-10, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 12/85 (14%) Query: 21 ARLFDVRSREEAAAGTIPGALNIPVSELESALQMEPAAFQALYSAEKPKLEDEHLVFFCQ 80 DVR E+ + GA+NIP+ E++ + P D + +C Sbjct: 2 EHWIDVRVPEQYQQEHVQGAINIPLKEVKERIATA-----------VPDKND-TVKVYCN 49 Query: 81 MGKRGLQATQLARSLGYTGARNYAG 105 G++ QA ++ +GYT N G Sbjct: 50 AGRQSGQAKEILSEMGYTHVENAGG 74 >1QB0-A nrPDB Length = 211 Score = 51.4 bits (121), Expect = 9e-08, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 40/104 (38%), Gaps = 21/104 (20%) Query: 20 RARLFDVRSREEAAAGTIPGALNIPVSELESALQMEPAAFQALYSAEKPKLEDEH--LVF 77 + + D R E G I A+N+P L+ + +F L S P D+ L+F Sbjct: 65 KFVIVDCRYPYEYEGGHIKTAVNLP-------LERDAESFL-LKSPIAPCSLDKRVILIF 116 Query: 78 FCQ-MGKRG----------LQATQLARSLGYTGARNYAGAYREW 110 C+ +RG +A SL Y G Y+E+ Sbjct: 117 HCEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEF 160 >4WH9-A nrPDB Length = 183 Score = 50.2 bits (118), Expect = 2e-07, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 36/104 (34%), Gaps = 21/104 (20%) Query: 20 RARLFDVRSREEAAAGTIPGALNIPVSELESALQMEPAAFQALYSAEKPKLEDEHLVFFC 79 + + D R E G I A+N+P L+ + +F L S P D+ ++ Sbjct: 52 KFVIVDCRYPYEYEGGHIKTAVNLP-------LERDAESFL-LKSPIAPCSLDKRVILIF 103 Query: 80 QMGKRGLQATQLAR-------------SLGYTGARNYAGAYREW 110 + ++ R SL Y G Y+E+ Sbjct: 104 HSEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEF 147 >1OKG-A nrPDB Length = 373 Score = 48.3 bits (113), Expect = 7e-07, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 30/108 (27%), Gaps = 20/108 (18%) Query: 23 LFDVRSREEA-----------AAGTIPGALNIPVSEL-----ESALQMEPAAFQALYSAE 66 + D RS + G I GA N+P + + + + Sbjct: 177 ITDARSADRFASTVRPYAADKMPGHIEGARNLPYTSHLVTRGDGKVLRSEEEIRHNIMTV 236 Query: 67 ---KPKLED-EHLVFFCQMGKRGLQATQLARSLGYTGARNYAGAYREW 110 D VF C G L LG Y G++ E+ Sbjct: 237 VQGAGDAADLSSFVFSCGSGVTACINIALVHHLGLGHPYLYCGSWSEY 284 >1C25-A nrPDB Length = 161 Score = 47.5 bits (111), Expect = 1e-06, Method: Composition-based stats. Identities = 25/122 (20%), Positives = 42/122 (34%), Gaps = 25/122 (20%) Query: 10 PELRSLLASGRAR-------LFDVRSREEAAAGTIPGALNIPVSELESALQMEPAAFQAL 62 PE+ + + +G+ + D R E G I GA+N+ ++ E F Sbjct: 27 PEIMASVLNGKFANLIKEFVIIDCRYPYEYEGGHIKGAVNL-------HMEEEVEDFLLK 79 Query: 63 YSAEKPKLEDEHLVFFCQM----GKRGLQATQLARSLG-------YTGARNYAGAYREWL 111 + +VF C+ G R + + LG Y G Y+E+ Sbjct: 80 KPIVPTDGKRVIVVFHCEFSSERGPRMCRYVRERDRLGNEYPKLHYPELYVLKGGYKEFF 139 Query: 112 EK 113 K Sbjct: 140 MK 141 >1GN0-A nrPDB Length = 108 Score = 47.1 bits (110), Expect = 1e-06, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 32/104 (30%), Gaps = 14/104 (13%) Query: 7 VSLPELRSLLASGRARLFDVRSREEAAAGTIPGALNIPVSELESALQMEPAAFQALYSAE 66 +++ + L A L D+R + A G A ++ L M F Sbjct: 7 INVADAHQKLQEKEAVLVDIRDPQSFAMGHAVQAFHLTNDTL--GAFMRDNDF------- 57 Query: 67 KPKLEDEHLVFFCQMGKRGLQATQLARSLGYTGARNYAGAYREW 110 D ++ C G A Q GY + G + W Sbjct: 58 -----DTPVMVMCYHGNSSKGAAQYLLQQGYDVVYSIDGGFEAW 96 >2WLX-A nrPDB Length = 423 Score = 45.6 bits (106), Expect = 4e-06, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 1/62 (1%) Query: 49 ESALQMEPAAFQALYSAEKPKLEDEHLVFFCQMGKRGLQATQLARSLGYTGARNYAGAYR 108 A++ A K E + + F+C G R + AR++G+ Y G + Sbjct: 336 PDGTMRSADDITAMWKAWNIKPE-QQVSFYCGTGWRASETFMYARAMGWKNVSVYDGGWY 394 Query: 109 EW 110 EW Sbjct: 395 EW 396 Score = 39.4 bits (90), Expect = 3e-04, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 27/84 (32%), Gaps = 2/84 (2%) Query: 29 REEAAAGTIPGALNIPVSELESA--LQMEPAAFQALYSAEKPKLEDEHLVFFCQMGKRGL 86 + IPGA I +E+ES A+ D ++ + + Sbjct: 158 PKLYLISHIPGADYIDTNEVESEPLWNKVSDEQLKAMLAKHGIRHDTTVILYGRDVYAAA 217 Query: 87 QATQLARSLGYTGARNYAGAYREW 110 + Q+ G R G ++ W Sbjct: 218 RVAQIMLYAGVKDVRLLDGGWQTW 241 >1YT8-A nrPDB Length = 539 Score = 41.4 bits (95), Expect = 1e-04, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 41/112 (36%), Gaps = 9/112 (8%) Query: 4 APTVSLPELRSLLASGRARLFDVRSREEAAAGTIPGALNIPVSELESALQMEPAAFQALY 63 A + L DVR+ EE AG +PG+ + P + L E ++ Sbjct: 270 AGLAQWQDEHDRT----TYLLDVRTPEEYEAGHLPGSRSTPGGQ----LVQETDHVASVR 321 Query: 64 SAEKPKLEDEHLVFFCQMGKRGLQATQLARSLGYTGA-RNYAGAYREWLEKE 114 A ++D+ + Q+A G + A + GA+ L ++ Sbjct: 322 GARLVLVDDDGVRANMSASWLAQMGWQVAVLDGLSEADFSERGAWSAPLPRQ 373 Score = 40.6 bits (93), Expect = 1e-04, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 33/108 (30%), Gaps = 14/108 (12%) Query: 4 APTVSLPELRSLLASGRARLFDVRSREEAAAGTIPGALNIPVSELESALQMEPAAFQALY 63 A T+ L L R+ D + A IPGA + S+L+ AL+ A Sbjct: 376 ADTIDPTTLADWLGEPGTRVLDFTASANYAKRHIPGAAWVLRSQLKQALERLGTA----- 430 Query: 64 SAEKPKLEDEHLVFFCQMGKRGLQATQLARSLGYTGARNYAGAYREWL 111 E V C A ++L G W+ Sbjct: 431 ---------ERYVLTCGSSLLARFAVAEVQALSGKPVFLLDGGTSAWV 469 Score = 35.6 bits (80), Expect = 0.005, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 38/108 (35%), Gaps = 14/108 (12%) Query: 5 PTVSLPELRSLLAS-GRARLFDVRSREEAAAGTIPGALNIPVSELESALQMEPAAFQALY 63 P+++ E+++LL + A + D R +E +IPG +++P A Sbjct: 130 PSLAAEEVQALLDARAEAVILDARRFDEYQTMSIPGGISVP-----------GAELVLRV 178 Query: 64 SAEKPKLEDEHLVFFCQMGKRGLQATQLARSLGYTG-ARNYAGAYREW 110 + P ++ C R + TQ + G W Sbjct: 179 AELAPDPRTR-VIVNCAGRTRSIIGTQSLLNAGIPNPVAALRNGTIGW 225 Score = 34.8 bits (78), Expect = 0.010, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 26/86 (30%), Gaps = 12/86 (13%) Query: 25 DVRSREEAAAGTIPGALNIPVSELESALQMEPAAFQALYSAEKPKLEDEHLVFFCQMGKR 84 DVR + A A N+P+S LE + + D + + Sbjct: 28 DVREEDPFAQAHPLFAANLPLSRLELEIHA------------RVPRRDTPITVYDDGEGL 75 Query: 85 GLQATQLARSLGYTGARNYAGAYREW 110 A Q LGY+ G W Sbjct: 76 APVAAQRLHDLGYSDVALLDGGLSGW 101 >3OP3-A nrPDB Length = 216 Score = 40.2 bits (92), Expect = 2e-04, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 35/104 (33%), Gaps = 21/104 (20%) Query: 20 RARLFDVRSREEAAAGTIPGALNIPVSELESALQMEPAAFQALYSAEKPKLEDEHLV--F 77 + + D R E G I GALN+ E ++ P + ++ F Sbjct: 78 KFYVIDCRYPYEYLGGHIQGALNLYSQEELFNFFLKK--------PIVPLDTQKRIIIVF 129 Query: 78 FCQ-MGKRGLQATQLARS----------LGYTGARNYAGAYREW 110 C+ +RG + + R L Y G YR++ Sbjct: 130 HCEFSSERGPRMCRCLREEDRSLNQYPALYYPELYILKGGYRDF 173 >5XC2-A nrPDB Length = 796 Score = 29.8 bits (65), Expect = 0.31, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 23/73 (31%), Gaps = 1/73 (1%) Query: 4 APTVSLPELRSLL-ASGRARLFDVRSREEAAAGTIPGALNIPVSELESALQMEPAAFQAL 62 APT P LL G +R G+ P ++P ++ + + Sbjct: 84 APTTPDPYTLRLLDGYGGNPGLTIRQPSAKVLGSYPPTNDVPYTDAGYMINSVVVDLRLT 143 Query: 63 YSAEKPKLEDEHL 75 S + D + Sbjct: 144 SSEWSDVVPDRQV 156 >3QBO-A nrPDB Length = 364 Score = 29.4 bits (64), Expect = 0.32, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 24/82 (29%), Gaps = 2/82 (2%) Query: 27 RSREEAAAGTIPGALNIPVSELESALQMEPAAFQALYSAEKPKLEDEHLVFFCQMGKRGL 86 R+++E G + VS + + V FC G R Sbjct: 24 RAQQELRDWHGLGTSVMEVSHRSKEFMQVAEESEKDLRDLLNVPANYK-VLFCHGGARAQ 82 Query: 87 QATQLARSLGYTGARNY-AGAY 107 A LG + +Y G Y Sbjct: 83 FAAVPLNLLGDRNSADYVDGGY 104 >5I92-A nrPDB Length = 435 Score = 29.0 bits (63), Expect = 0.45, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 23/67 (34%), Gaps = 9/67 (13%) Query: 33 AAGTIPGALNIPVSELESALQMEPAAFQALYSAEKPKLEDEHLVFFCQMGKRGLQATQLA 92 A IPG +N PV +S P F+ A +D+ V + Sbjct: 19 AQKHIPGGVNSPVRAFKSVGGT-PLFFKHAEGAYVLDEDDKRYVDYVGS--------WGP 69 Query: 93 RSLGYTG 99 LG++ Sbjct: 70 MILGHSH 76 >1R9W-A nrPDB Length = 145 Score = 28.3 bits (61), Expect = 0.86, Method: Composition-based stats. Identities = 6/31 (19%), Positives = 10/31 (32%) Query: 83 KRGLQATQLARSLGYTGARNYAGAYREWLEK 113 R A G + G EW+++ Sbjct: 110 LRSSVAALYWYRTGISNISEVMGDTPEWIQR 140 >3QM2-A nrPDB Length = 386 Score = 27.9 bits (60), Expect = 1.0, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 23/71 (32%), Gaps = 7/71 (9%) Query: 47 ELESALQMEPAAFQALYSAEKPKLEDEHLVFFCQMGKRGLQATQLARSLGYTGARNY--A 104 E + F+ L + V FC G RG A LG +Y A Sbjct: 69 EFIQVAEEAEQDFRDLLNIPSNYK-----VLFCHGGGRGQFAGVPLNLLGDKTTADYVDA 123 Query: 105 GAYREWLEKES 115 G + KE+ Sbjct: 124 GYWAASAIKEA 134 >3TG3-A nrPDB Length = 142 Score = 27.9 bits (60), Expect = 1.2, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 30/77 (38%), Gaps = 7/77 (9%) Query: 12 LRSLLASGRAR--LFDVRSREEAAAGTIPGALNIPVSEL-ESALQMEPAAFQALYSAEKP 68 L +LL SG + L D R E I A+NI S+L + LQ + L Sbjct: 11 LVALLESGTEKVLLIDSRPFVEYNTSHILEAININCSKLMKRRLQQDKVLITELIQHSAK 70 Query: 69 KLED----EHLVFFCQM 81 D + +V + Q Sbjct: 71 HKVDIDCSQKVVVYDQS 87 >2VSW-A nrPDB Length = 153 Score = 27.9 bits (60), Expect = 1.2, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 30/77 (38%), Gaps = 7/77 (9%) Query: 12 LRSLLASGRAR--LFDVRSREEAAAGTIPGALNIPVSEL-ESALQMEPAAFQALYSAEKP 68 L +LL SG + L D R E I A+NI S+L + LQ + L Sbjct: 11 LVALLESGTEKVLLIDSRPFVEYNTSHILEAININCSKLMKRRLQQDKVLITELIQHSAK 70 Query: 69 KLED----EHLVFFCQM 81 D + +V + Q Sbjct: 71 HKVDIDCSQKVVVYDQS 87 >1T3K-A nrPDB Length = 152 Score = 27.5 bits (59), Expect = 1.2, Method: Composition-based stats. Identities = 24/122 (19%), Positives = 35/122 (28%), Gaps = 22/122 (18%) Query: 1 MAGAPTVSL---PELRSLLASGRARLFDVRSREEAAAGTIPGALNIPVSELESALQMEPA 57 MA A ++S +L L + DVR E G I G+L+ A Sbjct: 21 MAMARSISYITSTQLLPLHRRPNIAIIDVRDEERNYDGHIAGSLH-------YASGSFDD 73 Query: 58 AFQALYSAEKPKLEDEHLVFFCQ-MGKRGLQATQLARS--------LGYTGARNYAGAYR 108 L K + + LVF RG + + G + Sbjct: 74 KISHLVQNVK---DKDTLVFHSALSQVRGPTCARRLVNYLDEKKEDTGIKNIMILERGFN 130 Query: 109 EW 110 W Sbjct: 131 GW 132 >1BJO-A nrPDB Length = 360 Score = 26.7 bits (57), Expect = 2.1, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 2/42 (4%) Query: 76 VFFCQMGKRGLQATQLARSLGYTGARNY--AGAYREWLEKES 115 V FC G RG A LG +Y AG + KE+ Sbjct: 67 VLFCHGGGRGQFAAVPLNILGDKTTADYVDAGYWAASAIKEA 108 >5ND5-A nrPDB Length = 692 Score = 26.7 bits (57), Expect = 2.5, Method: Composition-based stats. Identities = 16/107 (14%), Positives = 36/107 (33%), Gaps = 10/107 (9%) Query: 5 PTVSLPELRSLLASGRARLFDVRSREEAAAGTIPGALNIPVSELESALQMEPAAFQALYS 64 P++S E+ + + R D ++ +G PG +P+ + + Y+ Sbjct: 22 PSISRDEVEKCINAIRFLAIDAINKS--KSGH-PG---MPMGCAPMGYVLWNEVMK--YN 73 Query: 65 AEKPKLEDEHLVFFCQMGKRGLQATQLARSLGYTGAR-NYAGAYREW 110 + P + G + + GY + +R+W Sbjct: 74 PKNPDFFNRDRFVLSA-GHGSMFQYSMMHLTGYDSVPLDQIKQFRQW 119 >4RZQ-A nrPDB Length = 468 Score = 26.3 bits (56), Expect = 3.1, Method: Composition-based stats. Identities = 5/36 (13%), Positives = 10/36 (27%) Query: 28 SREEAAAGTIPGALNIPVSELESALQMEPAAFQALY 63 S + PG L + P + ++ Sbjct: 370 SPGKVNHLHSPGGLGVRWDSHVYGGYTVPPHYDSMI 405 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.304 0.119 0.311 Lambda K H 0.267 0.0361 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,674,034 Number of Sequences: 36641 Number of extensions: 102875 Number of successful extensions: 392 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 49 Number of HSP's successfully gapped in prelim test: 17 Number of HSP's that attempted gapping in prelim test: 285 Number of HSP's gapped (non-prelim): 83 length of query: 115 length of database: 10,336,785 effective HSP length: 80 effective length of query: 35 effective length of database: 7,405,505 effective search space: 259192675 effective search space used: 259192675 T: 11 A: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.0 bits) S2: 52 (24.8 bits)