BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= Q8NE86
         (351 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

6O5B-J nrPDB                                                          726   0.0  
4XTB-A nrPDB                                                          228   4e-60
5KUI-A nrPDB                                                          225   2e-59
4XSJ-A nrPDB                                                          189   1e-48
5ID3-A nrPDB                                                          148   4e-36
6DT0-A nrPDB                                                           54   1e-07
6C5W-A nrPDB                                                           48   6e-06
6D7W-A nrPDB                                                           48   7e-06
6DNF-A nrPDB                                                           42   3e-04
4AM6-A nrPDB                                                           32   0.54 
1ZY2-A nrPDB                                                           29   3.5  
5M1C-A nrPDB                                                           28   4.3  

>6O5B-J nrPDB
          Length = 351

 Score =  726 bits (1874), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/351 (100%), Positives = 351/351 (100%)

Query: 1   MAAAAGRSLLLLLSSRGGGGGGAGGCGALTAGCFPGLGVSRHRQQQHHRTVHQRIASWQN 60
           MAAAAGRSLLLLLSSRGGGGGGAGGCGALTAGCFPGLGVSRHRQQQHHRTVHQRIASWQN
Sbjct: 1   MAAAAGRSLLLLLSSRGGGGGGAGGCGALTAGCFPGLGVSRHRQQQHHRTVHQRIASWQN 60

Query: 61  LGAVYCSTVVPSDDVTVVYQNGLPVISVRLPSRRERCQFTLKPISDSVGVFLRQLQEEDR 120
           LGAVYCSTVVPSDDVTVVYQNGLPVISVRLPSRRERCQFTLKPISDSVGVFLRQLQEEDR
Sbjct: 61  LGAVYCSTVVPSDDVTVVYQNGLPVISVRLPSRRERCQFTLKPISDSVGVFLRQLQEEDR 120

Query: 121 GIDRVAIYSPDGVRVAASTGIDLLLLDDFKLVINDLTYHVRPPKRDLLSHENAATLNDVK 180
           GIDRVAIYSPDGVRVAASTGIDLLLLDDFKLVINDLTYHVRPPKRDLLSHENAATLNDVK
Sbjct: 121 GIDRVAIYSPDGVRVAASTGIDLLLLDDFKLVINDLTYHVRPPKRDLLSHENAATLNDVK 180

Query: 181 TLVQQLYTTLCIEQHQLNKERELIERLEDLKEQLAPLEKVRIEISRKAEKRTTLVLWGGL 240
           TLVQQLYTTLCIEQHQLNKERELIERLEDLKEQLAPLEKVRIEISRKAEKRTTLVLWGGL
Sbjct: 181 TLVQQLYTTLCIEQHQLNKERELIERLEDLKEQLAPLEKVRIEISRKAEKRTTLVLWGGL 240

Query: 241 AYMATQFGILARLTWWEYSWDIMEPVTYFITYGSAMAMYAYFVMTRQEYVYPEARDRQYL 300
           AYMATQFGILARLTWWEYSWDIMEPVTYFITYGSAMAMYAYFVMTRQEYVYPEARDRQYL
Sbjct: 241 AYMATQFGILARLTWWEYSWDIMEPVTYFITYGSAMAMYAYFVMTRQEYVYPEARDRQYL 300

Query: 301 LFFHKGAKKSRFDLEKYNQLKDAIAQAEMDLKRLRDPLQVHLPLRQIGEKD 351
           LFFHKGAKKSRFDLEKYNQLKDAIAQAEMDLKRLRDPLQVHLPLRQIGEKD
Sbjct: 301 LFFHKGAKKSRFDLEKYNQLKDAIAQAEMDLKRLRDPLQVHLPLRQIGEKD 351


>4XTB-A nrPDB
          Length = 123

 Score =  228 bits (580), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 111/111 (100%), Positives = 111/111 (100%)

Query: 75  VTVVYQNGLPVISVRLPSRRERCQFTLKPISDSVGVFLRQLQEEDRGIDRVAIYSPDGVR 134
           VTVVYQNGLPVISVRLPSRRERCQFTLKPISDSVGVFLRQLQEEDRGIDRVAIYSPDGVR
Sbjct: 13  VTVVYQNGLPVISVRLPSRRERCQFTLKPISDSVGVFLRQLQEEDRGIDRVAIYSPDGVR 72

Query: 135 VAASTGIDLLLLDDFKLVINDLTYHVRPPKRDLLSHENAATLNDVKTLVQQ 185
           VAASTGIDLLLLDDFKLVINDLTYHVRPPKRDLLSHENAATLNDVKTLVQQ
Sbjct: 73  VAASTGIDLLLLDDFKLVINDLTYHVRPPKRDLLSHENAATLNDVKTLVQQ 123


>5KUI-A nrPDB
          Length = 124

 Score =  225 bits (573), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 119/123 (96%), Positives = 120/123 (97%)

Query: 67  STVVPSDDVTVVYQNGLPVISVRLPSRRERCQFTLKPISDSVGVFLRQLQEEDRGIDRVA 126
           S +  SDDVTVVYQNGLPVISVRLPSRRERCQFTLKPISDSVGVFLRQLQEEDRGIDRVA
Sbjct: 2   SHMASSDDVTVVYQNGLPVISVRLPSRRERCQFTLKPISDSVGVFLRQLQEEDRGIDRVA 61

Query: 127 IYSPDGVRVAASTGIDLLLLDDFKLVINDLTYHVRPPKRDLLSHENAATLNDVKTLVQQL 186
           IYSPDGVRVAASTGIDLLLLDDFKLVINDLTYHVRPPKRDLLSHENAATLNDVKTLVQQL
Sbjct: 62  IYSPDGVRVAASTGIDLLLLDDFKLVINDLTYHVRPPKRDLLSHENAATLNDVKTLVQQL 121

Query: 187 YTT 189
           YTT
Sbjct: 122 YTT 124


>4XSJ-A nrPDB
          Length = 262

 Score =  189 bits (480), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 91/91 (100%), Positives = 91/91 (100%)

Query: 75  VTVVYQNGLPVISVRLPSRRERCQFTLKPISDSVGVFLRQLQEEDRGIDRVAIYSPDGVR 134
           VTVVYQNGLPVISVRLPSRRERCQFTLKPISDSVGVFLRQLQEEDRGIDRVAIYSPDGVR
Sbjct: 164 VTVVYQNGLPVISVRLPSRRERCQFTLKPISDSVGVFLRQLQEEDRGIDRVAIYSPDGVR 223

Query: 135 VAASTGIDLLLLDDFKLVINDLTYHVRPPKR 165
           VAASTGIDLLLLDDFKLVINDLTYHVRPPKR
Sbjct: 224 VAASTGIDLLLLDDFKLVINDLTYHVRPPKR 254


>5ID3-A nrPDB
          Length = 159

 Score =  148 bits (373), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 68/150 (45%), Positives = 102/150 (68%)

Query: 190 LCIEQHQLNKERELIERLEDLKEQLAPLEKVRIEISRKAEKRTTLVLWGGLAYMATQFGI 249
           L +++++L++E++L+ +LE+ +  LAPL   + +I ++AE  T  V W G A    Q G+
Sbjct: 4   LSVDEYKLSREKKLLLQLENAETLLAPLHDAKRKIEQEAEAHTDRVAWAGFAASGVQTGL 63

Query: 250 LARLTWWEYSWDIMEPVTYFITYGSAMAMYAYFVMTRQEYVYPEARDRQYLLFFHKGAKK 309
            ARLTWWEYSWDI+EPVTYF TY +  A + Y++ T+Q + YP AR+R Y   F++ A+K
Sbjct: 64  FARLTWWEYSWDIVEPVTYFATYSTVAATFGYYLYTQQSFEYPSARERVYTKQFYRRAQK 123

Query: 310 SRFDLEKYNQLKDAIAQAEMDLKRLRDPLQ 339
             FD+EKYN+L   + +    LKRLRDPL+
Sbjct: 124 QNFDIEKYNRLVTEVDELRNQLKRLRDPLE 153


>6DT0-A nrPDB
          Length = 458

 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 66/128 (51%), Gaps = 12/128 (9%)

Query: 205 ERLEDLKEQLAPLEKVRIEISRKAEKRTTLVLWGGLAYMATQFGILARLTWW-EYSWDIM 263
           +RL  +  ++  L K++ E    A +    +  GG   +A  +G++  +T+  E+ WD++
Sbjct: 254 QRLRKMSSEIDGLAKIKHECDLLAHRSAHRLAKGGFGLLAGWWGVVYYVTFHTEFGWDLV 313

Query: 264 EPVTYFITYGSAMAMYAYFVMTRQEYVYPEARD-----RQYLLFFHKGAKKSRFDLEKYN 318
           EPVTY     + M  Y +F+   ++  Y  A +     RQ+ L+  KG     FD+E++ 
Sbjct: 314 EPVTYLAGLTTIMGGYLWFLYINKDLSYKAAMNVTVSRRQHALYEMKG-----FDIERWE 368

Query: 319 QL-KDAIA 325
           QL +DA A
Sbjct: 369 QLVQDANA 376


>6C5W-A nrPDB
          Length = 312

 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 11/121 (9%)

Query: 206 RLEDLKEQLAPLEKVRIEISRKAEKRTTLVLWGGLAYMATQFGILARLTWW-EYSWDIME 264
           RL  + +++  +  V+ E    A K    +  GG A +A  +GI+  +T+  +  WD++E
Sbjct: 163 RLRRMSQEIDQMATVKRECDLLAHKGAHALAKGGFAALAAWWGIVYYVTFHTDMGWDLVE 222

Query: 265 PVTYFITYGSAMAMYAYFVMTRQEYVYPEARD-----RQYLLFFHKGAKKSRFDLEKYNQ 319
           P+TY     S M  Y +F+   ++  Y  A +     RQ  L+  +G     FD  K++Q
Sbjct: 223 PITYLAGLASIMGGYLWFLFISRDLSYKAAMNVTVSRRQNALYQERG-----FDPAKWDQ 277

Query: 320 L 320
           L
Sbjct: 278 L 278


>6D7W-A nrPDB
          Length = 416

 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 11/135 (8%)

Query: 206 RLEDLKEQLAPLEKVRIEISRKAEKRTTLVLWGGLAYMATQFGILARLTW-WEYSWDIME 264
           RL  +  ++  L +++ E    A +    V  GG   +A  + I+ +LT+  +  WD ME
Sbjct: 241 RLRKISRRIQGLAEIKHECDALAHRGAQRVALGGFGILAFWWYIVYKLTFETDLGWDTME 300

Query: 265 PVTYFITYGSAMAMYAYFVMTRQEYVYPEARD-----RQYLLFFHKGAKKSRFDLEKYNQ 319
           PVTY ++  + M  Y +F+   +E  Y  A D     RQ  L+  KG      DL+ +  
Sbjct: 301 PVTYLVSLSTLMGGYLWFLYHNREISYRSALDFTINARQKKLYQMKG-----IDLQVWES 355

Query: 320 LKDAIAQAEMDLKRL 334
           L D       ++K +
Sbjct: 356 LIDEANAIRREIKNI 370


>6DNF-A nrPDB
          Length = 352

 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 6/110 (5%)

Query: 203 LIERLEDLKEQLAPLEKVRIEISRKAEKRTTLVLWGGLAYMATQFGILARLTW-WEYSWD 261
           L +RL     +++ L  ++ E  + A +    +   G   +   + I+ RLT+  +  WD
Sbjct: 166 LRQRLRRTSRKISKLAAIKEECDKAAHRGAQRIALAGCGGLIGYWYIVYRLTFETDLGWD 225

Query: 262 IMEPVTYFITYGSAMAMYAYFVMTRQEYVYPEARD-----RQYLLFFHKG 306
           +MEPVTY +   + +  Y +F+   +E  Y  A +     RQ  L+  KG
Sbjct: 226 VMEPVTYLVGLSTLIGGYMWFLWHNREVSYRSALNITVSARQNKLYQAKG 275


>4AM6-A nrPDB
          Length = 655

 Score = 31.6 bits (70), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 32/126 (25%)

Query: 162 PPKRDLLSHENAATLNDVKTLVQ------QLYTTLCIEQHQLNK---ERELIERLED--- 209
           P  RDL ++E    LND  +L Q       LY  L  +   LN+      +I++L+D   
Sbjct: 409 PESRDLFTNE----LNDWNSLSQFESKEGNLYCDLNDDLKILNRILDAHNIIDQLQDKPE 464

Query: 210 -----LKEQLAPLEK----------VRIEISRKAEKRTTLVLWGGLAYM-ATQFGILARL 253
                LKE  APLEK          +  +++R     + +++ GG + + A  F +  R+
Sbjct: 465 NYGNTLKENFAPLEKAIVQSIANASITADVTRMNSFYSNILIVGGSSKIPALDFILTDRI 524

Query: 254 TWWEYS 259
             W  S
Sbjct: 525 NIWRPS 530


>1ZY2-A nrPDB
          Length = 150

 Score = 28.9 bits (63), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 15/31 (48%), Positives = 20/31 (64%)

Query: 185 QLYTTLCIEQHQLNKERELIERLEDLKEQLA 215
           +L     IE  +L KE EL+ R +DLKE+LA
Sbjct: 109 ELTINKAIEHRKLRKENELLRREKDLKEKLA 139


>5M1C-A nrPDB
          Length = 517

 Score = 28.5 bits (62), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 2/45 (4%)

Query: 308 KKSRFDLEKYNQLKDAIAQAEM--DLKRLRDPLQVHLPLRQIGEK 350
           + S  D  KYN L+D +   E   +LKR+  P+  HL + +I ++
Sbjct: 17  RGSHMDAMKYNDLRDFLTLLEQQGELKRITLPVDPHLEITEIADR 61


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

6O5B-J nrPDB                                                          650   0.0  
5KUI-A nrPDB                                                          241   5e-64
4XTB-A nrPDB                                                          235   3e-62
5ID3-A nrPDB                                                          221   5e-58
4XSJ-A nrPDB                                                          196   2e-50
6D7W-A nrPDB                                                          184   6e-47
6DT0-A nrPDB                                                          183   8e-47
6C5W-A nrPDB                                                          178   4e-45
6DNF-A nrPDB                                                          171   3e-43

Sequences not found previously or not previously below threshold:

5FDN-A nrPDB                                                           32   0.33 
6C5R-A nrPDB                                                           32   0.55 
6FBA-A nrPDB                                                           31   0.76 
3WCG-A nrPDB                                                           30   1.2  
5JQE-A nrPDB                                                           30   1.3  
5H31-A nrPDB                                                           30   1.5  


CONVERGED!
>6O5B-J nrPDB
          Length = 351

 Score =  650 bits (1676), Expect = 0.0,   Method: Composition-based stats.
 Identities = 351/351 (100%), Positives = 351/351 (100%)

Query: 1   MAAAAGRSLLLLLSSRGGGGGGAGGCGALTAGCFPGLGVSRHRQQQHHRTVHQRIASWQN 60
           MAAAAGRSLLLLLSSRGGGGGGAGGCGALTAGCFPGLGVSRHRQQQHHRTVHQRIASWQN
Sbjct: 1   MAAAAGRSLLLLLSSRGGGGGGAGGCGALTAGCFPGLGVSRHRQQQHHRTVHQRIASWQN 60

Query: 61  LGAVYCSTVVPSDDVTVVYQNGLPVISVRLPSRRERCQFTLKPISDSVGVFLRQLQEEDR 120
           LGAVYCSTVVPSDDVTVVYQNGLPVISVRLPSRRERCQFTLKPISDSVGVFLRQLQEEDR
Sbjct: 61  LGAVYCSTVVPSDDVTVVYQNGLPVISVRLPSRRERCQFTLKPISDSVGVFLRQLQEEDR 120

Query: 121 GIDRVAIYSPDGVRVAASTGIDLLLLDDFKLVINDLTYHVRPPKRDLLSHENAATLNDVK 180
           GIDRVAIYSPDGVRVAASTGIDLLLLDDFKLVINDLTYHVRPPKRDLLSHENAATLNDVK
Sbjct: 121 GIDRVAIYSPDGVRVAASTGIDLLLLDDFKLVINDLTYHVRPPKRDLLSHENAATLNDVK 180

Query: 181 TLVQQLYTTLCIEQHQLNKERELIERLEDLKEQLAPLEKVRIEISRKAEKRTTLVLWGGL 240
           TLVQQLYTTLCIEQHQLNKERELIERLEDLKEQLAPLEKVRIEISRKAEKRTTLVLWGGL
Sbjct: 181 TLVQQLYTTLCIEQHQLNKERELIERLEDLKEQLAPLEKVRIEISRKAEKRTTLVLWGGL 240

Query: 241 AYMATQFGILARLTWWEYSWDIMEPVTYFITYGSAMAMYAYFVMTRQEYVYPEARDRQYL 300
           AYMATQFGILARLTWWEYSWDIMEPVTYFITYGSAMAMYAYFVMTRQEYVYPEARDRQYL
Sbjct: 241 AYMATQFGILARLTWWEYSWDIMEPVTYFITYGSAMAMYAYFVMTRQEYVYPEARDRQYL 300

Query: 301 LFFHKGAKKSRFDLEKYNQLKDAIAQAEMDLKRLRDPLQVHLPLRQIGEKD 351
           LFFHKGAKKSRFDLEKYNQLKDAIAQAEMDLKRLRDPLQVHLPLRQIGEKD
Sbjct: 301 LFFHKGAKKSRFDLEKYNQLKDAIAQAEMDLKRLRDPLQVHLPLRQIGEKD 351


>5KUI-A nrPDB
          Length = 124

 Score =  241 bits (614), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 119/123 (96%), Positives = 120/123 (97%)

Query: 67  STVVPSDDVTVVYQNGLPVISVRLPSRRERCQFTLKPISDSVGVFLRQLQEEDRGIDRVA 126
           S +  SDDVTVVYQNGLPVISVRLPSRRERCQFTLKPISDSVGVFLRQLQEEDRGIDRVA
Sbjct: 2   SHMASSDDVTVVYQNGLPVISVRLPSRRERCQFTLKPISDSVGVFLRQLQEEDRGIDRVA 61

Query: 127 IYSPDGVRVAASTGIDLLLLDDFKLVINDLTYHVRPPKRDLLSHENAATLNDVKTLVQQL 186
           IYSPDGVRVAASTGIDLLLLDDFKLVINDLTYHVRPPKRDLLSHENAATLNDVKTLVQQL
Sbjct: 62  IYSPDGVRVAASTGIDLLLLDDFKLVINDLTYHVRPPKRDLLSHENAATLNDVKTLVQQL 121

Query: 187 YTT 189
           YTT
Sbjct: 122 YTT 124


>4XTB-A nrPDB
          Length = 123

 Score =  235 bits (599), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 111/111 (100%), Positives = 111/111 (100%)

Query: 75  VTVVYQNGLPVISVRLPSRRERCQFTLKPISDSVGVFLRQLQEEDRGIDRVAIYSPDGVR 134
           VTVVYQNGLPVISVRLPSRRERCQFTLKPISDSVGVFLRQLQEEDRGIDRVAIYSPDGVR
Sbjct: 13  VTVVYQNGLPVISVRLPSRRERCQFTLKPISDSVGVFLRQLQEEDRGIDRVAIYSPDGVR 72

Query: 135 VAASTGIDLLLLDDFKLVINDLTYHVRPPKRDLLSHENAATLNDVKTLVQQ 185
           VAASTGIDLLLLDDFKLVINDLTYHVRPPKRDLLSHENAATLNDVKTLVQQ
Sbjct: 73  VAASTGIDLLLLDDFKLVINDLTYHVRPPKRDLLSHENAATLNDVKTLVQQ 123


>5ID3-A nrPDB
          Length = 159

 Score =  221 bits (562), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 68/150 (45%), Positives = 102/150 (68%)

Query: 190 LCIEQHQLNKERELIERLEDLKEQLAPLEKVRIEISRKAEKRTTLVLWGGLAYMATQFGI 249
           L +++++L++E++L+ +LE+ +  LAPL   + +I ++AE  T  V W G A    Q G+
Sbjct: 4   LSVDEYKLSREKKLLLQLENAETLLAPLHDAKRKIEQEAEAHTDRVAWAGFAASGVQTGL 63

Query: 250 LARLTWWEYSWDIMEPVTYFITYGSAMAMYAYFVMTRQEYVYPEARDRQYLLFFHKGAKK 309
            ARLTWWEYSWDI+EPVTYF TY +  A + Y++ T+Q + YP AR+R Y   F++ A+K
Sbjct: 64  FARLTWWEYSWDIVEPVTYFATYSTVAATFGYYLYTQQSFEYPSARERVYTKQFYRRAQK 123

Query: 310 SRFDLEKYNQLKDAIAQAEMDLKRLRDPLQ 339
             FD+EKYN+L   + +    LKRLRDPL+
Sbjct: 124 QNFDIEKYNRLVTEVDELRNQLKRLRDPLE 153


>4XSJ-A nrPDB
          Length = 262

 Score =  196 bits (497), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 94/112 (83%), Positives = 96/112 (85%), Gaps = 11/112 (9%)

Query: 54  RIASWQNLGAVYCSTVVPSDDVTVVYQNGLPVISVRLPSRRERCQFTLKPISDSVGVFLR 113
           R  +W   G+V           TVVYQNGLPVISVRLPSRRERCQFTLKPISDSVGVFLR
Sbjct: 154 RTGTWDAYGSV-----------TVVYQNGLPVISVRLPSRRERCQFTLKPISDSVGVFLR 202

Query: 114 QLQEEDRGIDRVAIYSPDGVRVAASTGIDLLLLDDFKLVINDLTYHVRPPKR 165
           QLQEEDRGIDRVAIYSPDGVRVAASTGIDLLLLDDFKLVINDLTYHVRPPKR
Sbjct: 203 QLQEEDRGIDRVAIYSPDGVRVAASTGIDLLLLDDFKLVINDLTYHVRPPKR 254


>6D7W-A nrPDB
          Length = 416

 Score =  184 bits (467), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 11/155 (7%)

Query: 203 LIERLEDLKEQLAPLEKVRIEISRKAEKRTTLVLWGGLAYMATQFGILARLTW-WEYSWD 261
           L  RL  +  ++  L +++ E    A +    V  GG   +A  + I+ +LT+  +  WD
Sbjct: 238 LRMRLRKISRRIQGLAEIKHECDALAHRGAQRVALGGFGILAFWWYIVYKLTFETDLGWD 297

Query: 262 IMEPVTYFITYGSAMAMYAYFVMTRQEYVYPEARD-----RQYLLFFHKGAKKSRFDLEK 316
            MEPVTY ++  + M  Y +F+   +E  Y  A D     RQ  L+  KG      DL+ 
Sbjct: 298 TMEPVTYLVSLSTLMGGYLWFLYHNREISYRSALDFTINARQKKLYQMKG-----IDLQV 352

Query: 317 YNQLKDAIAQAEMDLKRLRDPLQVHLPLRQIGEKD 351
           +  L D       ++K +     V    R+  + D
Sbjct: 353 WESLIDEANAIRREIKNIAAEYDVDWDERKDEQDD 387


>6DT0-A nrPDB
          Length = 458

 Score =  183 bits (465), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 34/143 (23%), Positives = 69/143 (48%), Gaps = 11/143 (7%)

Query: 198 NKERELIERLEDLKEQLAPLEKVRIEISRKAEKRTTLVLWGGLAYMATQFGILARLTWW- 256
           ++   + +RL  +  ++  L K++ E    A +    +  GG   +A  +G++  +T+  
Sbjct: 247 DRTYYMRQRLRKMSSEIDGLAKIKHECDLLAHRSAHRLAKGGFGLLAGWWGVVYYVTFHT 306

Query: 257 EYSWDIMEPVTYFITYGSAMAMYAYFVMTRQEYVYPEARD-----RQYLLFFHKGAKKSR 311
           E+ WD++EPVTY     + M  Y +F+   ++  Y  A +     RQ+ L+  KG     
Sbjct: 307 EFGWDLVEPVTYLAGLTTIMGGYLWFLYINKDLSYKAAMNVTVSRRQHALYEMKG----- 361

Query: 312 FDLEKYNQLKDAIAQAEMDLKRL 334
           FD+E++ QL         +++ +
Sbjct: 362 FDIERWEQLVQDANALRREIRVI 384


>6C5W-A nrPDB
          Length = 312

 Score =  178 bits (451), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 11/141 (7%)

Query: 198 NKERELIERLEDLKEQLAPLEKVRIEISRKAEKRTTLVLWGGLAYMATQFGILARLTWW- 256
           ++   +  RL  + +++  +  V+ E    A K    +  GG A +A  +GI+  +T+  
Sbjct: 155 DRTYYMRMRLRRMSQEIDQMATVKRECDLLAHKGAHALAKGGFAALAAWWGIVYYVTFHT 214

Query: 257 EYSWDIMEPVTYFITYGSAMAMYAYFVMTRQEYVYPEARD-----RQYLLFFHKGAKKSR 311
           +  WD++EP+TY     S M  Y +F+   ++  Y  A +     RQ  L+  +G     
Sbjct: 215 DMGWDLVEPITYLAGLASIMGGYLWFLFISRDLSYKAAMNVTVSRRQNALYQERG----- 269

Query: 312 FDLEKYNQLKDAIAQAEMDLK 332
           FD  K++QL         ++K
Sbjct: 270 FDPAKWDQLVHDANGLRREIK 290


>6DNF-A nrPDB
          Length = 352

 Score =  171 bits (434), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 64/149 (42%), Gaps = 11/149 (7%)

Query: 198 NKERELIERLEDLKEQLAPLEKVRIEISRKAEKRTTLVLWGGLAYMATQFGILARLTW-W 256
           ++   L +RL     +++ L  ++ E  + A +    +   G   +   + I+ RLT+  
Sbjct: 161 DRTYYLRQRLRRTSRKISKLAAIKEECDKAAHRGAQRIALAGCGGLIGYWYIVYRLTFET 220

Query: 257 EYSWDIMEPVTYFITYGSAMAMYAYFVMTRQEYVYPEARD-----RQYLLFFHKGAKKSR 311
           +  WD+MEPVTY +   + +  Y +F+   +E  Y  A +     RQ  L+  KG     
Sbjct: 221 DLGWDVMEPVTYLVGLSTLIGGYMWFLWHNREVSYRSALNITVSARQNKLYQAKG----- 275

Query: 312 FDLEKYNQLKDAIAQAEMDLKRLRDPLQV 340
           F L+ +    +       ++K +     V
Sbjct: 276 FSLQDWEGYLEEANAMRREIKAVASEYDV 304


>5FDN-A nrPDB
          Length = 987

 Score = 32.3 bits (72), Expect = 0.33,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 10/91 (10%)

Query: 153 INDLTYHVRPPKRDLLSH-----ENAATLNDVKTLVQQL---YTTLCIEQHQLNKERELI 204
           + D  YH R   R LLS+        AT  +V+  ++ L   Y +LC        +  L+
Sbjct: 393 VRDKLYHTRERSRQLLSNGISDIPEEATFTNVEQFLEPLELCYRSLCSCGDSPIADGSLL 452

Query: 205 ERLEDLKEQLAPLEKVRIEISRKAEKRTTLV 235
           + L  +      L  VR++I +++E+ T ++
Sbjct: 453 DFLRQVSTF--GLSLVRLDIRQESERHTDVL 481


>6C5R-A nrPDB
          Length = 210

 Score = 31.5 bits (70), Expect = 0.55,   Method: Composition-based stats.
 Identities = 4/34 (11%), Positives = 14/34 (41%), Gaps = 2/34 (5%)

Query: 198 NKERELIERLEDLKEQLAPLEKVRIEI--SRKAE 229
           ++   +  RL  + +++  +  V+ E    +   
Sbjct: 145 DRTYYMRMRLRRMSQEIDQMATVKREAKWDQLVH 178


>6FBA-A nrPDB
          Length = 349

 Score = 31.1 bits (69), Expect = 0.76,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 41/93 (44%), Gaps = 12/93 (12%)

Query: 261 DIMEPVTYFITYGSAMAMYAYFVMTRQEYVY----PEARDRQYLLFFHKGAKKSRFDLEK 316
           DI+  +TY +   +          +     Y     E  +  ++++  +  K+   D+++
Sbjct: 219 DIVNTITYNLKKNN--------FYSDDSIKYFDNLEEGLEDVHIIYMTRIQKERFTDVDE 270

Query: 317 YNQLKDAIAQAEMDLKRLRDPLQVHLPLRQIGE 349
           YNQ K+A   +   L+  RD  ++  PL ++ E
Sbjct: 271 YNQYKNAFILSNKTLENTRDDTKILHPLPRVNE 303


>3WCG-A nrPDB
          Length = 365

 Score = 30.4 bits (67), Expect = 1.2,   Method: Composition-based stats.
 Identities = 36/139 (25%), Positives = 55/139 (39%), Gaps = 34/139 (24%)

Query: 97  CQFTLKPISDSVGVFLRQLQEEDRGIDRVAIYSPDGVRVAASTGIDLLLLDDFKLVINDL 156
           C   L+ +S S  V + +L EE R  D V I+               L+L     V +D+
Sbjct: 31  CYDILQAVSRSFAVVIMELDEEMR--DAVCIF--------------YLVLRALDTVEDDM 74

Query: 157 TYHVRPPKRDLLS-HENAATLNDVKTLVQQLYTTLCIEQHQLNKERELIERLEDLKEQLA 215
           +  V    R+L   HE+   L+D         TT C+    + +EREL+ER   +    +
Sbjct: 75  SIPVEFKLRELPKFHEH---LHD---------TTWCMSGVGVGRERELLERYTHVTRAYS 122

Query: 216 PLEKVRIE-----ISRKAE 229
            L K   +       R A 
Sbjct: 123 RLGKAYQDVISGICERMAN 141


>5JQE-A nrPDB
          Length = 565

 Score = 30.4 bits (67), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 27/62 (43%)

Query: 166 DLLSHENAATLNDVKTLVQQLYTTLCIEQHQLNKERELIERLEDLKEQLAPLEKVRIEIS 225
           D +       + D   L Q+L     +E+  L+  +EL+ R+  L   +  L   + E+ 
Sbjct: 407 DYIPQRKQEPIKDALMLFQRLQEKRMLEESNLSFLKELLFRINRLDLLITYLNTRKEEME 466

Query: 226 RK 227
           R+
Sbjct: 467 RE 468


>5H31-A nrPDB
          Length = 188

 Score = 30.0 bits (66), Expect = 1.5,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 27/62 (43%)

Query: 166 DLLSHENAATLNDVKTLVQQLYTTLCIEQHQLNKERELIERLEDLKEQLAPLEKVRIEIS 225
           D +       + D   L Q+L     +E+  L+  +EL+ R+  L   +  L   + E+ 
Sbjct: 28  DYIPQRKQEPIKDALMLFQRLQEKRMLEESNLSFLKELLFRINRLDLLITYLNTRKEEME 87

Query: 226 RK 227
           R+
Sbjct: 88  RE 89


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.314    0.138    0.400 

Lambda     K      H
   0.267   0.0423    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,338,088
Number of Sequences: 36641
Number of extensions: 608052
Number of successful extensions: 2902
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 2685
Number of HSP's gapped (non-prelim): 174
length of query: 351
length of database: 10,336,785
effective HSP length: 98
effective length of query: 253
effective length of database: 6,745,967
effective search space: 1706729651
effective search space used: 1706729651
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 60 (27.7 bits)