BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q8NCC3 (412 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 4X97-A nrPDB 786 0.0 5BV7-A nrPDB 394 e-110 4F0H-A nrPDB 31 0.77 4MXM-A nrPDB 30 1.5 4NWI-A nrPDB 29 4.3 >4X97-A nrPDB Length = 380 Score = 786 bits (2031), Expect = 0.0, Method: Compositional matrix adjust. Identities = 379/379 (100%), Positives = 379/379 (100%) Query: 34 AGRHPPVVLVPGDLGNQLEAKLDKPTVVHYLCSKKTESYFTIWLNLELLLPVIIDCWIDN 93 AGRHPPVVLVPGDLGNQLEAKLDKPTVVHYLCSKKTESYFTIWLNLELLLPVIIDCWIDN Sbjct: 2 AGRHPPVVLVPGDLGNQLEAKLDKPTVVHYLCSKKTESYFTIWLNLELLLPVIIDCWIDN 61 Query: 94 IRLVYNKTSRATQFPDGVDVRVPGFGKTFSLEFLDPSKSSVGSYFHTMVESLVGWGYTRG 153 IRLVYNKTSRATQFPDGVDVRVPGFGKTFSLEFLDPSKSSVGSYFHTMVESLVGWGYTRG Sbjct: 62 IRLVYNKTSRATQFPDGVDVRVPGFGKTFSLEFLDPSKSSVGSYFHTMVESLVGWGYTRG 121 Query: 154 EDVRGAPYDWRRAPNENGPYFLALREMIEEMYQLYGGPVVLVAHSMGNMYTLYFLQRQPQ 213 EDVRGAPYDWRRAPNENGPYFLALREMIEEMYQLYGGPVVLVAHSMGNMYTLYFLQRQPQ Sbjct: 122 EDVRGAPYDWRRAPNENGPYFLALREMIEEMYQLYGGPVVLVAHSMGNMYTLYFLQRQPQ 181 Query: 214 AWKDKYIRAFVSLGAPWGGVAKTLRVLASGDNNRIPVIGPLKIREQQRSAVSTSWLLPYN 273 AWKDKYIRAFVSLGAPWGGVAKTLRVLASGDNNRIPVIGPLKIREQQRSAVSTSWLLPYN Sbjct: 182 AWKDKYIRAFVSLGAPWGGVAKTLRVLASGDNNRIPVIGPLKIREQQRSAVSTSWLLPYN 241 Query: 274 YTWSPEKVFVQTPTINYTLRDYRKFFQDIGFEDGWLMRQDTEGLVEATMPPGVQLHCLYG 333 YTWSPEKVFVQTPTINYTLRDYRKFFQDIGFEDGWLMRQDTEGLVEATMPPGVQLHCLYG Sbjct: 242 YTWSPEKVFVQTPTINYTLRDYRKFFQDIGFEDGWLMRQDTEGLVEATMPPGVQLHCLYG 301 Query: 334 TGVPTPDSFYYESFPDRDPKICFGDGDGTVNLKSALQCQAWQSRQEHQVLLQELPGSEHI 393 TGVPTPDSFYYESFPDRDPKICFGDGDGTVNLKSALQCQAWQSRQEHQVLLQELPGSEHI Sbjct: 302 TGVPTPDSFYYESFPDRDPKICFGDGDGTVNLKSALQCQAWQSRQEHQVLLQELPGSEHI 361 Query: 394 EMLANATTLAYLKRVLLGP 412 EMLANATTLAYLKRVLLGP Sbjct: 362 EMLANATTLAYLKRVLLGP 380 >5BV7-A nrPDB Length = 422 Score = 394 bits (1011), Expect = e-110, Method: Compositional matrix adjust. Identities = 186/375 (49%), Positives = 256/375 (68%), Gaps = 4/375 (1%) Query: 39 PVVLVPGDLGNQLEAKLDKPTVVHYLCSKKTESYFTIWLNLELLLPVIIDCWIDNIRLVY 98 PV+LVPG LGNQLEAKLDKP VV+++C +KTE +FTIWL+L + LP+ +DCWIDN R+VY Sbjct: 24 PVILVPGCLGNQLEAKLDKPDVVNWMCYRKTEDFFTIWLDLNMFLPLGVDCWIDNTRVVY 83 Query: 99 NKTSRATQFPDGVDVRVPGFGKTFSLEFLDPSKSSVGSYFHTMVESLVGWGYTRGEDVRG 158 N++S GV +RVPGFGKT+S+E+LD SK + Y HT+V++LV GY R E VR Sbjct: 84 NRSSGLVSNAPGVQIRVPGFGKTYSVEYLDSSK--LAGYLHTLVQNLVNNGYVRDETVRA 141 Query: 159 APYDWRRAPNENGPYFLALREMIEEMYQLYGGPVVLVAHSMGNMYTLYFLQRQPQAWKDK 218 APYDWR P + Y+ L ++EEM+ YG PV L+ HS+G ++ LYFL RQPQAWKD+ Sbjct: 142 APYDWRLEPGQQEEYYRKLAGLVEEMHAAYGKPVFLIGHSLGCLHLLYFLLRQPQAWKDR 201 Query: 219 YIRAFVSLGAPWGGVAKTLRVLASGDNNRIPVIGPLKIREQQRSAVSTSWLLPYNYTWSP 278 +I F+SLGAPWGG K + VLASGDN IP++ +K++E+QR ++ W+ P W Sbjct: 202 FIDGFISLGAPWGGSIKPMLVLASGDNQGIPIMSSIKLKEEQRITTTSPWMFPSRMAWPE 261 Query: 279 EKVFVQTPTINYTLRDYRKFFQDIGFEDGWLMRQDTEGLVEATMPPGVQLHCLYGTGVPT 338 + VF+ TP+ NYT RD+++FF D+ FE+GW M + L+ PGV+++CLYG G+PT Sbjct: 262 DHVFISTPSFNYTGRDFQRFFADLHFEEGWYMWLQSRDLLAGLPAPGVEVYCLYGVGLPT 321 Query: 339 PDSFYYE-SFPDRDP-KICFGDGDGTVNLKSALQCQAWQSRQEHQVLLQELPGSEHIEML 396 P ++ Y+ FP DP + + DGD TV +S C WQ RQ V L L G +H+ M+ Sbjct: 322 PRTYIYDHGFPYTDPVGVLYEDGDDTVATRSTELCGLWQGRQPQPVHLLPLHGIQHLNMV 381 Query: 397 ANATTLAYLKRVLLG 411 + TL ++ +LLG Sbjct: 382 FSNLTLEHINAILLG 396 >4F0H-A nrPDB Length = 493 Score = 31.2 bits (69), Expect = 0.77, Method: Compositional matrix adjust. Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 6/72 (8%) Query: 224 VSLGAPWGGVAKTLRVLASGDNNRIPVIGPLKIREQQ------RSAVSTSWLLPYNYTWS 277 + GA VA +LA +N GP +RE R+A+ + +NYT + Sbjct: 421 IQSGATANRVALEAMILARNENRDFLTEGPEILREAAKNCGALRTALDLWKDITFNYTST 480 Query: 278 PEKVFVQTPTIN 289 FV+TPT N Sbjct: 481 DTSDFVETPTAN 492 >4MXM-A nrPDB Length = 203 Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust. Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 3/104 (2%) Query: 123 SLEFLDPSKSSVGSYFHTMVESLVGWGYTRGEDVRGAPYDWRRAPNENGPYFLALREMIE 182 SLE + V + ++S++G GE + Y+WR E + LALR++ E Sbjct: 86 SLEEASTVRERVLALIRCELQSIMGGS---GEAMAVLVYEWRSLSAEGQAHVLALRDVYE 142 Query: 183 EMYQLYGGPVVLVAHSMGNMYTLYFLQRQPQAWKDKYIRAFVSL 226 +++ G + G+++ +W + RA SL Sbjct: 143 QIWLQVLGEAKAAGYIRGDVFITRRFLTGALSWTTTWFRAQGSL 186 >4NWI-A nrPDB Length = 319 Score = 28.9 bits (63), Expect = 4.3, Method: Compositional matrix adjust. Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 3/63 (4%) Query: 142 VESLVGWGYTRGEDVRGAPYDWRRAPNENGPYFLALREMIEEMY---QLYGGPVVLVAHS 198 V+ ++ W GE G P+D Y ALR+ E + Q G P ++ + Sbjct: 114 VQYMIEWWTKSGELTSGFPFDQSEIDQIASKYTHALRDRTHEFFADLQRLGIPTLVFSAG 173 Query: 199 MGN 201 +GN Sbjct: 174 LGN 176 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4X97-A nrPDB 705 0.0 5BV7-A nrPDB 674 0.0 Sequences not found previously or not previously below threshold: 6GAS-A nrPDB 33 0.20 4V5G-AZ nrPDB 31 0.77 1REO-A nrPDB 30 2.3 1Y7H-A nrPDB 30 2.6 3ATQ-A nrPDB 29 3.7 3LKD-A nrPDB 29 3.8 4CCY-A nrPDB 29 4.7 6BXU-A nrPDB 29 5.0 5W1D-A nrPDB 29 5.1 3LZX-A nrPDB 29 5.1 3MI6-A nrPDB 28 5.8 4CCW-A nrPDB 28 7.3 3JWE-A nrPDB 28 9.3 CONVERGED! >4X97-A nrPDB Length = 380 Score = 705 bits (1820), Expect = 0.0, Method: Composition-based stats. Identities = 379/379 (100%), Positives = 379/379 (100%) Query: 34 AGRHPPVVLVPGDLGNQLEAKLDKPTVVHYLCSKKTESYFTIWLNLELLLPVIIDCWIDN 93 AGRHPPVVLVPGDLGNQLEAKLDKPTVVHYLCSKKTESYFTIWLNLELLLPVIIDCWIDN Sbjct: 2 AGRHPPVVLVPGDLGNQLEAKLDKPTVVHYLCSKKTESYFTIWLNLELLLPVIIDCWIDN 61 Query: 94 IRLVYNKTSRATQFPDGVDVRVPGFGKTFSLEFLDPSKSSVGSYFHTMVESLVGWGYTRG 153 IRLVYNKTSRATQFPDGVDVRVPGFGKTFSLEFLDPSKSSVGSYFHTMVESLVGWGYTRG Sbjct: 62 IRLVYNKTSRATQFPDGVDVRVPGFGKTFSLEFLDPSKSSVGSYFHTMVESLVGWGYTRG 121 Query: 154 EDVRGAPYDWRRAPNENGPYFLALREMIEEMYQLYGGPVVLVAHSMGNMYTLYFLQRQPQ 213 EDVRGAPYDWRRAPNENGPYFLALREMIEEMYQLYGGPVVLVAHSMGNMYTLYFLQRQPQ Sbjct: 122 EDVRGAPYDWRRAPNENGPYFLALREMIEEMYQLYGGPVVLVAHSMGNMYTLYFLQRQPQ 181 Query: 214 AWKDKYIRAFVSLGAPWGGVAKTLRVLASGDNNRIPVIGPLKIREQQRSAVSTSWLLPYN 273 AWKDKYIRAFVSLGAPWGGVAKTLRVLASGDNNRIPVIGPLKIREQQRSAVSTSWLLPYN Sbjct: 182 AWKDKYIRAFVSLGAPWGGVAKTLRVLASGDNNRIPVIGPLKIREQQRSAVSTSWLLPYN 241 Query: 274 YTWSPEKVFVQTPTINYTLRDYRKFFQDIGFEDGWLMRQDTEGLVEATMPPGVQLHCLYG 333 YTWSPEKVFVQTPTINYTLRDYRKFFQDIGFEDGWLMRQDTEGLVEATMPPGVQLHCLYG Sbjct: 242 YTWSPEKVFVQTPTINYTLRDYRKFFQDIGFEDGWLMRQDTEGLVEATMPPGVQLHCLYG 301 Query: 334 TGVPTPDSFYYESFPDRDPKICFGDGDGTVNLKSALQCQAWQSRQEHQVLLQELPGSEHI 393 TGVPTPDSFYYESFPDRDPKICFGDGDGTVNLKSALQCQAWQSRQEHQVLLQELPGSEHI Sbjct: 302 TGVPTPDSFYYESFPDRDPKICFGDGDGTVNLKSALQCQAWQSRQEHQVLLQELPGSEHI 361 Query: 394 EMLANATTLAYLKRVLLGP 412 EMLANATTLAYLKRVLLGP Sbjct: 362 EMLANATTLAYLKRVLLGP 380 >5BV7-A nrPDB Length = 422 Score = 674 bits (1740), Expect = 0.0, Method: Composition-based stats. Identities = 186/375 (49%), Positives = 256/375 (68%), Gaps = 4/375 (1%) Query: 39 PVVLVPGDLGNQLEAKLDKPTVVHYLCSKKTESYFTIWLNLELLLPVIIDCWIDNIRLVY 98 PV+LVPG LGNQLEAKLDKP VV+++C +KTE +FTIWL+L + LP+ +DCWIDN R+VY Sbjct: 24 PVILVPGCLGNQLEAKLDKPDVVNWMCYRKTEDFFTIWLDLNMFLPLGVDCWIDNTRVVY 83 Query: 99 NKTSRATQFPDGVDVRVPGFGKTFSLEFLDPSKSSVGSYFHTMVESLVGWGYTRGEDVRG 158 N++S GV +RVPGFGKT+S+E+LD SK + Y HT+V++LV GY R E VR Sbjct: 84 NRSSGLVSNAPGVQIRVPGFGKTYSVEYLDSSK--LAGYLHTLVQNLVNNGYVRDETVRA 141 Query: 159 APYDWRRAPNENGPYFLALREMIEEMYQLYGGPVVLVAHSMGNMYTLYFLQRQPQAWKDK 218 APYDWR P + Y+ L ++EEM+ YG PV L+ HS+G ++ LYFL RQPQAWKD+ Sbjct: 142 APYDWRLEPGQQEEYYRKLAGLVEEMHAAYGKPVFLIGHSLGCLHLLYFLLRQPQAWKDR 201 Query: 219 YIRAFVSLGAPWGGVAKTLRVLASGDNNRIPVIGPLKIREQQRSAVSTSWLLPYNYTWSP 278 +I F+SLGAPWGG K + VLASGDN IP++ +K++E+QR ++ W+ P W Sbjct: 202 FIDGFISLGAPWGGSIKPMLVLASGDNQGIPIMSSIKLKEEQRITTTSPWMFPSRMAWPE 261 Query: 279 EKVFVQTPTINYTLRDYRKFFQDIGFEDGWLMRQDTEGLVEATMPPGVQLHCLYGTGVPT 338 + VF+ TP+ NYT RD+++FF D+ FE+GW M + L+ PGV+++CLYG G+PT Sbjct: 262 DHVFISTPSFNYTGRDFQRFFADLHFEEGWYMWLQSRDLLAGLPAPGVEVYCLYGVGLPT 321 Query: 339 PDSFYYE-SFPDRDP-KICFGDGDGTVNLKSALQCQAWQSRQEHQVLLQELPGSEHIEML 396 P ++ Y+ FP DP + + DGD TV +S C WQ RQ V L L G +H+ M+ Sbjct: 322 PRTYIYDHGFPYTDPVGVLYEDGDDTVATRSTELCGLWQGRQPQPVHLLPLHGIQHLNMV 381 Query: 397 ANATTLAYLKRVLLG 411 + TL ++ +LLG Sbjct: 382 FSNLTLEHINAILLG 396 >6GAS-A nrPDB Length = 331 Score = 33.4 bits (75), Expect = 0.20, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 34/89 (38%), Gaps = 24/89 (26%) Query: 310 MRQDTEGLVEATMPPGVQLHCLYGTGVPTPDSFYYE--SFPDR----------------D 351 MRQ + ++E+ G QL LY P+ + Y+ FP D Sbjct: 30 MRQASVKIIESLPQLGGQLSALY------PEKYIYDVAGFPKVRAQELVDNLKEQMKKFD 83 Query: 352 PKICFGDGDGTVNLKSALQCQAWQSRQEH 380 P +C + T+ ++ + ++Q H Sbjct: 84 PTVCLEEAVDTLEKQADGIFKLVTNKQTH 112 >4V5G-AZ nrPDB Length = 406 Score = 31.5 bits (70), Expect = 0.77, Method: Composition-based stats. Identities = 10/28 (35%), Positives = 17/28 (60%) Query: 102 SRATQFPDGVDVRVPGFGKTFSLEFLDP 129 + Q P GV++ +PG TF++E + P Sbjct: 351 TGVVQLPPGVEMVMPGDNVTFTVELIKP 378 >1REO-A nrPDB Length = 486 Score = 29.6 bits (65), Expect = 2.3, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 24/63 (38%), Gaps = 2/63 (3%) Query: 270 LPYNYTWSPEKVFVQTPT--INYTLRDYRKFFQDIGFEDGWLMRQDTEGLVEATMPPGVQ 327 LP + + P F I Y + D FFQ + F+D + + L+ +Q Sbjct: 350 LPSRFIYYPNHNFTSGVGVIIAYGIGDDANFFQALDFKDCADIVINDLSLIHQLPREEIQ 409 Query: 328 LHC 330 C Sbjct: 410 TFC 412 >1Y7H-A nrPDB Length = 268 Score = 29.6 bits (65), Expect = 2.6, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 2/42 (4%) Query: 172 PYFLALREMIEEMYQLYGGPVVLVAHSMGNMYTLYFLQRQPQ 213 Y L L E++E + V+LV HS+G M +++ PQ Sbjct: 57 DYTLPLMELMESLSA--DEKVILVGHSLGGMNLGLAMEKYPQ 96 >3ATQ-A nrPDB Length = 453 Score = 29.2 bits (64), Expect = 3.7, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 29/87 (33%), Gaps = 8/87 (9%) Query: 294 DYRKFFQDIGFEDGWLMRQDTEGLVEATMPPGVQLHCLYGTGVPTPDSFYYESF----PD 349 DY + F D G +G + + G+Q G G P+ +Y + PD Sbjct: 201 DYLRIFIDQETSPGGYWWYFPKGKNKVNVGLGIQ----GGMGYPSIHEYYKKYLDKYAPD 256 Query: 350 RDPKICFGDGDGTVNLKSALQCQAWQS 376 D G V + L AW Sbjct: 257 VDKSKLLVKGGALVPTRRPLYTMAWNG 283 >3LKD-A nrPDB Length = 542 Score = 29.2 bits (64), Expect = 3.8, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 23/57 (40%), Gaps = 1/57 (1%) Query: 271 PYNYTWSPEKVFVQTPTINYTLRDYRKFFQDIGF-EDGWLMRQDTEGLVEATMPPGV 326 PY+ WS F+ P + + K D F G+ + G++ +P GV Sbjct: 306 PYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHGV 362 >4CCY-A nrPDB Length = 296 Score = 28.8 bits (63), Expect = 4.7, Method: Composition-based stats. Identities = 32/161 (19%), Positives = 60/161 (37%), Gaps = 32/161 (19%) Query: 194 LVAHSMGNMYTLYFLQRQPQAWKDKYI----RAFVSL-------GAPWGGV--AKTLRVL 240 L S+G + + FL R P+ + + AF+S A G A++ Sbjct: 125 LAGLSLGGSHIVNFLLRAPERVERAVVISPAEAFISFHPDVYKYAAELTGARGAESYIKW 184 Query: 241 ASGDNNRI------PVIGPLKIREQQRSAVSTSWLLPYNYTWSPEKVFVQTPTINYTLRD 294 +GD+ + ++ ++ +++QRS T PY +T K +Q P + Sbjct: 185 ITGDSYDLHPLLQRQIVAGVEWQDEQRSLKPTENGFPYVFTDQELKS-IQVPVLLMFGEH 243 Query: 295 YRKFFQDIGFEDGWLMRQDTEGLVEATMPPGVQLHCLYGTG 335 + Q + FE + + PG+Q + G Sbjct: 244 EAMYHQQMAFER------------ASVLVPGIQAEIVKNAG 272 >6BXU-A nrPDB Length = 323 Score = 28.8 bits (63), Expect = 5.0, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 20/45 (44%), Gaps = 3/45 (6%) Query: 97 VYNKTSRATQFPDGVDVRVPGFGKTFSLEFLDPSKSSVGSYFHTM 141 V NKT+ GV++ V G+T++L + H++ Sbjct: 59 VINKTTGLVSIAPGVELIV---GQTYALTVQASDNAPPAERRHSI 100 >5W1D-A nrPDB Length = 429 Score = 28.8 bits (63), Expect = 5.1, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 20/45 (44%), Gaps = 3/45 (6%) Query: 97 VYNKTSRATQFPDGVDVRVPGFGKTFSLEFLDPSKSSVGSYFHTM 141 V NKT+ GV++ V G+T++L + H++ Sbjct: 165 VINKTTGLVSIAPGVELIV---GQTYALTVQASDNAPPAERRHSI 206 >3LZX-A nrPDB Length = 332 Score = 28.8 bits (63), Expect = 5.1, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 8/41 (19%) Query: 310 MRQDTEGLVEATMPPGVQLHCLYGTGVPTPDSFYYE--SFP 348 MRQ + ++E+ G QL LY P+ + Y+ FP Sbjct: 28 MRQASVKIIESLPQLGGQLSALY------PEKYIYDVAGFP 62 >3MI6-A nrPDB Length = 745 Score = 28.4 bits (62), Expect = 5.8, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 42/118 (35%), Gaps = 13/118 (11%) Query: 127 LDPSKSSVGSYFHTMVESLV---GWGYTRGEDVRGAP--YDWRRAPNENGP----YFLAL 177 LD ++ V Y ++ ++ Y + + R A + R ++ Y L + Sbjct: 449 LDMARPEVVDYLFKLMSQMIESANLDYIKWDMNRYATEMFSSRLTSDQQLELPHRYILGV 508 Query: 178 REMIEEMYQLYGGPVVLVAHSMGNMYTLYFLQRQPQAWKDKYIRA----FVSLGAPWG 231 ++ + Q Y + S G + L + PQAW A + G +G Sbjct: 509 YQLYARLTQAYPNVLFESCASGGGRFDLGMMYYAPQAWTSDDTDAAERLLIQFGTSYG 566 >4CCW-A nrPDB Length = 299 Score = 28.0 bits (61), Expect = 7.3, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 16/27 (59%) Query: 194 LVAHSMGNMYTLYFLQRQPQAWKDKYI 220 ++ S+G ++T+ FL R P+ K I Sbjct: 125 MIGLSLGGLHTMNFLLRMPERVKSAAI 151 >3JWE-A nrPDB Length = 320 Score = 27.6 bits (60), Expect = 9.3, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 3/71 (4%) Query: 173 YFLALREMIEEMYQLY-GGPVVLVAHSMGNMYTLYFLQRQPQAWKDKYIRAFVSLGAPWG 231 + + + ++ M + Y G PV L+ HSMG + +P + + + + L P Sbjct: 113 FVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANP-- 170 Query: 232 GVAKTLRVLAS 242 A T +VLA+ Sbjct: 171 ESATTFKVLAA 181 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.315 0.142 0.449 Lambda K H 0.267 0.0439 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 19,407,224 Number of Sequences: 36641 Number of extensions: 899918 Number of successful extensions: 1970 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 16 Number of HSP's that attempted gapping in prelim test: 1955 Number of HSP's gapped (non-prelim): 25 length of query: 412 length of database: 10,336,785 effective HSP length: 99 effective length of query: 313 effective length of database: 6,709,326 effective search space: 2100019038 effective search space used: 2100019038 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 61 (28.0 bits)