BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q8N543 (542 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 4NHY-A nrPDB 1121 0.0 4NHM-A nrPDB 94 1e-19 1WP9-A nrPDB 33 0.44 4J25-A nrPDB 30 1.9 4N06-A nrPDB 30 2.3 6IUQ-A nrPDB 30 3.4 4M8N-A nrPDB 30 3.7 >4NHY-A nrPDB Length = 562 Score = 1121 bits (2899), Expect = 0.0, Method: Compositional matrix adjust. Identities = 542/542 (100%), Positives = 542/542 (100%) Query: 1 MNGKRPAEPGPARVGKKGKKEVMAEFSDAVTEETLKKQVAEAWSRRTPFSHEVIVMDMDP 60 MNGKRPAEPGPARVGKKGKKEVMAEFSDAVTEETLKKQVAEAWSRRTPFSHEVIVMDMDP Sbjct: 21 MNGKRPAEPGPARVGKKGKKEVMAEFSDAVTEETLKKQVAEAWSRRTPFSHEVIVMDMDP 80 Query: 61 FLHCVIPNFIQSQDFLEGLQKELMNLDFHEKYNDLYKFQQSDDLKKRREPHISTLRKILF 120 FLHCVIPNFIQSQDFLEGLQKELMNLDFHEKYNDLYKFQQSDDLKKRREPHISTLRKILF Sbjct: 81 FLHCVIPNFIQSQDFLEGLQKELMNLDFHEKYNDLYKFQQSDDLKKRREPHISTLRKILF 140 Query: 121 EDFRSWLSDISKIDLESTIDMSCAKYEFTDALLCHDDELEGRRIAFILYLVPPWDRSMGG 180 EDFRSWLSDISKIDLESTIDMSCAKYEFTDALLCHDDELEGRRIAFILYLVPPWDRSMGG Sbjct: 141 EDFRSWLSDISKIDLESTIDMSCAKYEFTDALLCHDDELEGRRIAFILYLVPPWDRSMGG 200 Query: 181 TLDLYSIDEHFQPKQIVKSLIPSWNKLVFFEVSPVSFHQVSEVLSEEKSRLSISGWFHGP 240 TLDLYSIDEHFQPKQIVKSLIPSWNKLVFFEVSPVSFHQVSEVLSEEKSRLSISGWFHGP Sbjct: 201 TLDLYSIDEHFQPKQIVKSLIPSWNKLVFFEVSPVSFHQVSEVLSEEKSRLSISGWFHGP 260 Query: 241 SLTRPPNYFEPPIPRSPHIPQDHEILYDWINPTYLDMDYQVQIQEEFEESSEILLKEFLK 300 SLTRPPNYFEPPIPRSPHIPQDHEILYDWINPTYLDMDYQVQIQEEFEESSEILLKEFLK Sbjct: 261 SLTRPPNYFEPPIPRSPHIPQDHEILYDWINPTYLDMDYQVQIQEEFEESSEILLKEFLK 320 Query: 301 PEKFTKVCEALEHGHVEWSSRGPPNKRFYEKAEESKLPEILKECMKLFRSEALFLLLSNF 360 PEKFTKVCEALEHGHVEWSSRGPPNKRFYEKAEESKLPEILKECMKLFRSEALFLLLSNF Sbjct: 321 PEKFTKVCEALEHGHVEWSSRGPPNKRFYEKAEESKLPEILKECMKLFRSEALFLLLSNF 380 Query: 361 TGLKLHFLAPSEEDEMNDKKEAETTDITEEGTSHSPPEPENNQMAISNNSQQSNEQTDPE 420 TGLKLHFLAPSEEDEMNDKKEAETTDITEEGTSHSPPEPENNQMAISNNSQQSNEQTDPE Sbjct: 381 TGLKLHFLAPSEEDEMNDKKEAETTDITEEGTSHSPPEPENNQMAISNNSQQSNEQTDPE 440 Query: 421 PEENETKKESSVPMCQGELRHWKTGHYTLIHDHSKAEFALDLILYCGCEGWEPEYGGFTS 480 PEENETKKESSVPMCQGELRHWKTGHYTLIHDHSKAEFALDLILYCGCEGWEPEYGGFTS Sbjct: 441 PEENETKKESSVPMCQGELRHWKTGHYTLIHDHSKAEFALDLILYCGCEGWEPEYGGFTS 500 Query: 481 YIAKGEDEELLTVNPESNSLALVYRDRETLKFVKHINHRSLEQKKTFPNRTGFWDFSFIY 540 YIAKGEDEELLTVNPESNSLALVYRDRETLKFVKHINHRSLEQKKTFPNRTGFWDFSFIY Sbjct: 501 YIAKGEDEELLTVNPESNSLALVYRDRETLKFVKHINHRSLEQKKTFPNRTGFWDFSFIY 560 Query: 541 YE 542 YE Sbjct: 561 YE 562 >4NHM-A nrPDB Length = 647 Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 98/326 (30%), Positives = 146/326 (44%), Gaps = 51/326 (15%) Query: 55 VMDMDPFLHCVIPNFIQSQDFLEGLQKEL-MNLDFHEKYNDLYKFQQSDDLKK------- 106 + D P+ I + + D L ++KE+ + F +K D+Y+ QS DL Sbjct: 50 IEDSQPYNWGTIHELV-NDDLLRAVRKEIETEIHFTKKETDIYRVNQSGDLANLSGLDWD 108 Query: 107 --RREPHISTLRKILF----EDFRSWLSDISKIDLESTIDMSCAKYEFTDALLCHDDELE 160 R P++ LR+IL+ DF +++ K+ T DMS Y LL HDD + Sbjct: 109 DLSRLPNLFKLRQILYSKQYRDFFGYVTKAGKLSGSKT-DMSINTYTKGCHLLTHDDVIG 167 Query: 161 GRRIAFILYLVPP---WDRSMGGTLDLY-SIDEHFQPKQIVKSLIPSWNKLVFFEVSP-V 215 RRI+FILYL P W GG L L+ SI + L+P +N++ FF+V P Sbjct: 168 SRRISFILYLPDPDRKWKSHYGGGLRLFPSILPNVPHSDPSAKLVPQFNQIAFFKVLPGF 227 Query: 216 SFHQVSEVLSEEKSRLSISGWFHGPSLTRPPNYFEPPIPRSPHIPQDHEILYDWI-NPTY 274 SFH V EV +K RLSI GW+H P + +IP + E W+ N T Sbjct: 228 SFHDVEEV-KVDKHRLSIQGWYHIPQ-----------VGEEGYIPGEEEA---WVRNNTS 272 Query: 275 LDMDYQVQIQEEFEESSEILLKEFLKPEKFTKVCEALEHGHVEWSSRGPPNKRFYEKAEE 334 + + E+F EF K E+ + E H E +G + +E Sbjct: 273 TLAQIESNVLEDF---------EFPKDER--NILSFHEVKHFEKMLKGDAGAKTDNTPKE 321 Query: 335 SKLPEILKECMKLFRSEALFLLLSNF 360 S + ++ + +KL SEA F LS + Sbjct: 322 S-MTSVISDSVKL--SEAEFTYLSQY 344 >1WP9-A nrPDB Length = 494 Score = 32.7 bits (73), Expect = 0.44, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 25/54 (46%), Gaps = 5/54 (9%) Query: 301 PEKFTKVCEALEHGHVEWSSRGPPNKRFYEKA-----EESKLPEILKECMKLFR 349 PEK +V L H+E+ S P+ R Y K LPEI KE KL R Sbjct: 170 PEKIMEVINNLGIEHIEYRSENSPDVRPYVKGIRFEWVRVDLPEIYKEVRKLLR 223 >4J25-A nrPDB Length = 229 Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust. Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 10/74 (13%) Query: 164 IAFILYLVPPWDRSMGGTLDLYSIDEHFQPKQIVKSLIPSWNKLVFFEVSPVSFHQVSEV 223 ++ +LYL W GG L ++ D + + P LV F V EV Sbjct: 158 VSAVLYLNEGWQPHDGGQLRMFLAD------GVEHDVEPVAGCLVVFLSGEVP----HEV 207 Query: 224 LSEEKSRLSISGWF 237 L + RLS++GWF Sbjct: 208 LPAGRERLSLTGWF 221 >4N06-A nrPDB Length = 347 Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust. Identities = 13/38 (34%), Positives = 21/38 (55%) Query: 402 NQMAISNNSQQSNEQTDPEPEENETKKESSVPMCQGEL 439 NQMAI N ++ + ++PE E+ K + + C EL Sbjct: 114 NQMAILTNLAKARKDSNPEVAESLLKAKKEIDACLNEL 151 >6IUQ-A nrPDB Length = 345 Score = 29.6 bits (65), Expect = 3.4, Method: Compositional matrix adjust. Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 13/95 (13%) Query: 154 CHDDELEG---RRIAFILYLVPPWDRSMGGTLDLYSIDEHFQPKQIVKSLIPSWNKLVFF 210 CH D R++ +LYL W GG + L+ + QP + P +++V F Sbjct: 155 CHYDNPGAPNKRKVTCLLYLNEGWKEGDGGEVQLFPFLQ--QPVTVA----PKMDRVVLF 208 Query: 211 EVSPVSFHQVSEVLSEEKSRLSISGWFHGPSLTRP 245 + S + VL R ++ W G + P Sbjct: 209 Q----SDWMLHRVLPSHAERYVLTIWLDGAKVNAP 239 >4M8N-A nrPDB Length = 599 Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 6/57 (10%) Query: 473 PEYGGFTSYIAK--GEDEELLTVNPESNSLALVYRDRETLKFVKHINHRSLEQKKTF 527 PE G T+ + + GED E TV+ + + A + RD++ L H +LE++K F Sbjct: 63 PEAGTLTAVMIRDIGEDSEQTTVDEKCLAFAELIRDKQFLSCFVH----ALEEQKNF 115 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4NHY-A nrPDB 1024 0.0 4NHM-A nrPDB 402 e-112 Sequences not found previously or not previously below threshold: 4J25-A nrPDB 37 0.017 6IUQ-A nrPDB 36 0.033 4JZR-A nrPDB 35 0.099 3CX3-A nrPDB 35 0.11 5LBF-A nrPDB 34 0.18 2D6F-C nrPDB 33 0.38 6EQ0-A nrPDB 33 0.40 5V1B-A nrPDB 31 1.1 1BGX-T nrPDB 31 1.7 5GSL-A nrPDB 30 1.9 4N06-A nrPDB 30 2.6 3IG8-A nrPDB 30 3.7 5LJV-A nrPDB 30 3.7 1XFD-A nrPDB 29 4.4 5ZHI-A nrPDB 29 6.3 1LL6-A nrPDB 29 6.6 CONVERGED! >4NHY-A nrPDB Length = 562 Score = 1024 bits (2647), Expect = 0.0, Method: Composition-based stats. Identities = 542/542 (100%), Positives = 542/542 (100%) Query: 1 MNGKRPAEPGPARVGKKGKKEVMAEFSDAVTEETLKKQVAEAWSRRTPFSHEVIVMDMDP 60 MNGKRPAEPGPARVGKKGKKEVMAEFSDAVTEETLKKQVAEAWSRRTPFSHEVIVMDMDP Sbjct: 21 MNGKRPAEPGPARVGKKGKKEVMAEFSDAVTEETLKKQVAEAWSRRTPFSHEVIVMDMDP 80 Query: 61 FLHCVIPNFIQSQDFLEGLQKELMNLDFHEKYNDLYKFQQSDDLKKRREPHISTLRKILF 120 FLHCVIPNFIQSQDFLEGLQKELMNLDFHEKYNDLYKFQQSDDLKKRREPHISTLRKILF Sbjct: 81 FLHCVIPNFIQSQDFLEGLQKELMNLDFHEKYNDLYKFQQSDDLKKRREPHISTLRKILF 140 Query: 121 EDFRSWLSDISKIDLESTIDMSCAKYEFTDALLCHDDELEGRRIAFILYLVPPWDRSMGG 180 EDFRSWLSDISKIDLESTIDMSCAKYEFTDALLCHDDELEGRRIAFILYLVPPWDRSMGG Sbjct: 141 EDFRSWLSDISKIDLESTIDMSCAKYEFTDALLCHDDELEGRRIAFILYLVPPWDRSMGG 200 Query: 181 TLDLYSIDEHFQPKQIVKSLIPSWNKLVFFEVSPVSFHQVSEVLSEEKSRLSISGWFHGP 240 TLDLYSIDEHFQPKQIVKSLIPSWNKLVFFEVSPVSFHQVSEVLSEEKSRLSISGWFHGP Sbjct: 201 TLDLYSIDEHFQPKQIVKSLIPSWNKLVFFEVSPVSFHQVSEVLSEEKSRLSISGWFHGP 260 Query: 241 SLTRPPNYFEPPIPRSPHIPQDHEILYDWINPTYLDMDYQVQIQEEFEESSEILLKEFLK 300 SLTRPPNYFEPPIPRSPHIPQDHEILYDWINPTYLDMDYQVQIQEEFEESSEILLKEFLK Sbjct: 261 SLTRPPNYFEPPIPRSPHIPQDHEILYDWINPTYLDMDYQVQIQEEFEESSEILLKEFLK 320 Query: 301 PEKFTKVCEALEHGHVEWSSRGPPNKRFYEKAEESKLPEILKECMKLFRSEALFLLLSNF 360 PEKFTKVCEALEHGHVEWSSRGPPNKRFYEKAEESKLPEILKECMKLFRSEALFLLLSNF Sbjct: 321 PEKFTKVCEALEHGHVEWSSRGPPNKRFYEKAEESKLPEILKECMKLFRSEALFLLLSNF 380 Query: 361 TGLKLHFLAPSEEDEMNDKKEAETTDITEEGTSHSPPEPENNQMAISNNSQQSNEQTDPE 420 TGLKLHFLAPSEEDEMNDKKEAETTDITEEGTSHSPPEPENNQMAISNNSQQSNEQTDPE Sbjct: 381 TGLKLHFLAPSEEDEMNDKKEAETTDITEEGTSHSPPEPENNQMAISNNSQQSNEQTDPE 440 Query: 421 PEENETKKESSVPMCQGELRHWKTGHYTLIHDHSKAEFALDLILYCGCEGWEPEYGGFTS 480 PEENETKKESSVPMCQGELRHWKTGHYTLIHDHSKAEFALDLILYCGCEGWEPEYGGFTS Sbjct: 441 PEENETKKESSVPMCQGELRHWKTGHYTLIHDHSKAEFALDLILYCGCEGWEPEYGGFTS 500 Query: 481 YIAKGEDEELLTVNPESNSLALVYRDRETLKFVKHINHRSLEQKKTFPNRTGFWDFSFIY 540 YIAKGEDEELLTVNPESNSLALVYRDRETLKFVKHINHRSLEQKKTFPNRTGFWDFSFIY Sbjct: 501 YIAKGEDEELLTVNPESNSLALVYRDRETLKFVKHINHRSLEQKKTFPNRTGFWDFSFIY 560 Query: 541 YE 542 YE Sbjct: 561 YE 562 >4NHM-A nrPDB Length = 647 Score = 402 bits (1033), Expect = e-112, Method: Composition-based stats. Identities = 98/326 (30%), Positives = 146/326 (44%), Gaps = 51/326 (15%) Query: 55 VMDMDPFLHCVIPNFIQSQDFLEGLQKEL-MNLDFHEKYNDLYKFQQSDDLKK------- 106 + D P+ I + + D L ++KE+ + F +K D+Y+ QS DL Sbjct: 50 IEDSQPYNWGTIHELV-NDDLLRAVRKEIETEIHFTKKETDIYRVNQSGDLANLSGLDWD 108 Query: 107 --RREPHISTLRKILF----EDFRSWLSDISKIDLESTIDMSCAKYEFTDALLCHDDELE 160 R P++ LR+IL+ DF +++ K+ T DMS Y LL HDD + Sbjct: 109 DLSRLPNLFKLRQILYSKQYRDFFGYVTKAGKLSGSKT-DMSINTYTKGCHLLTHDDVIG 167 Query: 161 GRRIAFILYLVPP---WDRSMGGTLDLY-SIDEHFQPKQIVKSLIPSWNKLVFFEVSP-V 215 RRI+FILYL P W GG L L+ SI + L+P +N++ FF+V P Sbjct: 168 SRRISFILYLPDPDRKWKSHYGGGLRLFPSILPNVPHSDPSAKLVPQFNQIAFFKVLPGF 227 Query: 216 SFHQVSEVLSEEKSRLSISGWFHGPSLTRPPNYFEPPIPRSPHIPQDHEILYDWI-NPTY 274 SFH V EV +K RLSI GW+H P + +IP + E W+ N T Sbjct: 228 SFHDVEEV-KVDKHRLSIQGWYHIPQ-----------VGEEGYIPGEEEA---WVRNNTS 272 Query: 275 LDMDYQVQIQEEFEESSEILLKEFLKPEKFTKVCEALEHGHVEWSSRGPPNKRFYEKAEE 334 + + E+F EF K E+ + E H E +G + +E Sbjct: 273 TLAQIESNVLEDF---------EFPKDER--NILSFHEVKHFEKMLKGDAGAKTDNTPKE 321 Query: 335 SKLPEILKECMKLFRSEALFLLLSNF 360 S + ++ + +KL SEA F LS + Sbjct: 322 S-MTSVISDSVKL--SEAEFTYLSQY 344 >4J25-A nrPDB Length = 229 Score = 37.4 bits (85), Expect = 0.017, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 10/74 (13%) Query: 164 IAFILYLVPPWDRSMGGTLDLYSIDEHFQPKQIVKSLIPSWNKLVFFEVSPVSFHQVSEV 223 ++ +LYL W GG L ++ D + V + +VF +S EV Sbjct: 158 VSAVLYLNEGWQPHDGGQLRMFLADGVEHDVEPVAGCL-----VVF-----LSGEVPHEV 207 Query: 224 LSEEKSRLSISGWF 237 L + RLS++GWF Sbjct: 208 LPAGRERLSLTGWF 221 >6IUQ-A nrPDB Length = 345 Score = 36.3 bits (82), Expect = 0.033, Method: Composition-based stats. Identities = 39/180 (21%), Positives = 63/180 (35%), Gaps = 29/180 (16%) Query: 154 CHDDELEG---RRIAFILYLVPPWDRSMGGTLDLYSIDEHFQPKQIVKSLIPSWNKLVFF 210 CH D R++ +LYL W GG + L+ + Q V ++ P +++V F Sbjct: 155 CHYDNPGAPNKRKVTCLLYLNEGWKEGDGGEVQLFPFLQ-----QPV-TVAPKMDRVVLF 208 Query: 211 EVSPVSFHQVSEVLSEEKSRLSISGWFHGPSLTRPPNYFEPPIPRSPHIPQDHEILYDWI 270 + S H+ VL R ++ W G + P + L DW Sbjct: 209 Q-SDWMLHR---VLPSHAERYVLTIWLDGAKVNAP---------EDAQLRLTQSDLADWF 255 Query: 271 NPTYLDMDYQVQ------IQEEFEESSEILLKEFLKPEKFTKVCEALEHGHVEWSSRGPP 324 VQ + EE S + + E ++ ++ E HVE R P Sbjct: 256 GFLERLRRSPVQRLLSRGVYEEEYYESLMECMQSTSTEGCVELLKSHET-HVENVKRNGP 314 >4JZR-A nrPDB Length = 216 Score = 34.7 bits (78), Expect = 0.099, Method: Composition-based stats. Identities = 43/204 (21%), Positives = 82/204 (40%), Gaps = 27/204 (13%) Query: 52 EVIVMDMDPFLHCVIPNFIQSQDFLEGLQKELMNLDFHEKYNDLYKFQQSDDLKKR---- 107 E IV M+ CV+ +F+ + + + E+ L K+ D Q D K Sbjct: 13 EYIVPCMNKHGICVVDDFLGKETG-QQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGD 71 Query: 108 -------REPHISTLRKIL--FEDFRSWLS-DIS--KIDLESTIDMSCAKYEFTDALLCH 155 +EP T+ ++ +D + + KI+ + ++C T + Sbjct: 72 KITWIEGKEPGCETIGLLMSSMDDLIRHCNGKLGSYKINGRTKAMVACYPGNGTGYVRHV 131 Query: 156 DDELE-GRRIAFILYLVPPWDRSM-GGTLDLYSIDEHFQPKQIVKSLIPSWNKLVFFEVS 213 D+ GR + I YL WD + GG L ++ + K + P +++L+FF Sbjct: 132 DNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFP-----EGKAQFADIEPKFDRLLFFWSD 186 Query: 214 PVSFHQVSEVLSEEKSRLSISGWF 237 + H+V + +R +I+ W+ Sbjct: 187 RRNPHEVQPAYA---TRYAITVWY 207 >3CX3-A nrPDB Length = 284 Score = 34.7 bits (78), Expect = 0.11, Method: Composition-based stats. Identities = 29/125 (23%), Positives = 49/125 (39%), Gaps = 18/125 (14%) Query: 279 YQVQIQEEFEESSEILLKEFLKPEKFTKVCEALEHGHVEWSSR-------GPPNKRFYEK 331 YQ Q +++ E+ K K EK T+ +H + ++ G ++ Sbjct: 150 YQKNAQAFIKKAQELTKKFQPKFEKATQKTFVTQHTAFSYLAKRFGLNQLGIAGISPEQE 209 Query: 332 AEESKLPEILKECMKLFRSEALFL----------LLSNFTGLKLHFLAPSEEDEMNDKKE 381 +L EI +E +K ++ + +F L TG+ L L P E D NDK Sbjct: 210 PSPRQLTEI-QEFVKTYKVKTIFTESNASSKVAETLVKSTGVGLKTLNPLESDPQNDKTY 268 Query: 382 AETTD 386 E + Sbjct: 269 LENLE 273 >5LBF-A nrPDB Length = 252 Score = 33.9 bits (76), Expect = 0.18, Method: Composition-based stats. Identities = 42/204 (20%), Positives = 79/204 (38%), Gaps = 27/204 (13%) Query: 52 EVIVMDMDPFLHCVIPNFIQSQDFLEGLQKELMNLDFHEKYNDLYKFQQSDDLKKR---- 107 E IV M+ CV+ +F+ + + + E+ L K+ D Q D K Sbjct: 22 EYIVPCMNKHGICVVDDFLGKETG-QQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGD 80 Query: 108 -------REPHISTLRKIL--FEDFRSWLS-DISKIDLESTIDMSCAKYE-FTDALLCHD 156 +EP T+ ++ +D + + ++ A Y + H Sbjct: 81 KITWIEGKEPGCETIGLLMSSMDDLIRHCNGKLGSYKIKERTKAMVACYPGNGTGYVRHV 140 Query: 157 DEL--EGRRIAFILYLVPPWDRSM-GGTLDLYSIDEHFQPKQIVKSLIPSWNKLVFFEVS 213 D +GR + I YL WD + GG L ++ + K + P +++L+FF Sbjct: 141 DNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFP-----EGKAQFADIEPKFDRLLFFWSD 195 Query: 214 PVSFHQVSEVLSEEKSRLSISGWF 237 + H+V + +R +I+ W+ Sbjct: 196 RRNPHEVQPAYA---TRYAITVWY 216 >2D6F-C nrPDB Length = 619 Score = 32.8 bits (73), Expect = 0.38, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 23/47 (48%) Query: 61 FLHCVIPNFIQSQDFLEGLQKELMNLDFHEKYNDLYKFQQSDDLKKR 107 +L IP F D LEG+++ L L +K + + S+DL + Sbjct: 421 YLETDIPLFRIEDDLLEGIRRNLPELPSEKKERIMRDYGLSEDLASQ 467 >6EQ0-A nrPDB Length = 683 Score = 32.8 bits (73), Expect = 0.40, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 39/109 (35%), Gaps = 9/109 (8%) Query: 9 PGPARVGK----KGKKEVMAEFSDAVTEETLKKQVAEAWSRRTPFSHEVIVMDMDPFLHC 64 PGP+ + K K K +F +A E + V AW + ++IV+ +P+ Sbjct: 237 PGPSHILKPQHPKYSKNTYNQFKNAFPPEYMNMPVMGAWVPVSYRPDDLIVLRRNPYYW- 295 Query: 65 VIPNFIQSQDFLEGLQKELMNLDFHEKYNDLYKFQQSDDLKKRREPHIS 113 + Q +L + +L D+ S D +P Sbjct: 296 KVDEKGQQLPYLNEVHYKLS----TWADRDVQAVAGSGDFSNLEQPENF 340 >5V1B-A nrPDB Length = 240 Score = 31.2 bits (69), Expect = 1.1, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 9/79 (11%) Query: 160 EGRRIAFILYLVPPWDRSMGGTLDLYSIDEHFQPKQI-VKSLIPSWNKLVFFEVSPVSFH 218 +GR I I YL WD + G L + F + V ++ P +++L+ F + H Sbjct: 141 DGRCITCIYYLNQNWDVKVHGGL-----LQIFPEGRPVVANIEPLFDRLLIFWSDRRNPH 195 Query: 219 QVSEVLSEEKSRLSISGWF 237 +V + +R +I+ W+ Sbjct: 196 EVKPAYA---TRYAITVWY 211 >1BGX-T nrPDB Length = 832 Score = 30.9 bits (68), Expect = 1.7, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 36/85 (42%), Gaps = 7/85 (8%) Query: 63 HCVIPNFIQSQDFLEGLQKE--LMNLDFHEKYNDLYKFQQ----SDDLKKRREPHISTLR 116 + +++ D L+ +E L ++D + DL K + D KRREP LR Sbjct: 211 WGSLEALLKNLDRLKPAIREKILAHMDDLKLSWDLAKVRTDLPLEVDFAKRREPDRERLR 270 Query: 117 KILFE-DFRSWLSDISKIDLESTID 140 L +F S L + ++ ++ Sbjct: 271 AFLERLEFGSLLHEFGLLESPKALE 295 >5GSL-A nrPDB Length = 778 Score = 30.5 bits (67), Expect = 1.9, Method: Composition-based stats. Identities = 27/111 (24%), Positives = 44/111 (39%), Gaps = 7/111 (6%) Query: 259 IPQDHEILYDWINPTYLDMDYQVQIQEEFEESSEIL-LKEFLKPEKFTKVCEALEHGHVE 317 I +++ I + W+ Y D + + E F + +EI K F +P KV + H + Sbjct: 200 IVRENGIWHSWLKENYSLGDLEERYGERFSDYTEIAPPKSFSEP--LPKVLDWH---HFK 254 Query: 318 WSSRGPPNKRFYEKAEE-SKLPEILKECMKLFRSEALFLLLSNFTGLKLHF 367 +R YEK E +P L + L + F L L +H Sbjct: 255 IWMINEYVRRLYEKIREYVDVPISLLDPYLLLAAWKEFYLYVTRHKLDIHL 305 >4N06-A nrPDB Length = 347 Score = 30.1 bits (66), Expect = 2.6, Method: Composition-based stats. Identities = 13/38 (34%), Positives = 21/38 (55%) Query: 402 NQMAISNNSQQSNEQTDPEPEENETKKESSVPMCQGEL 439 NQMAI N ++ + ++PE E+ K + + C EL Sbjct: 114 NQMAILTNLAKARKDSNPEVAESLLKAKKEIDACLNEL 151 >3IG8-A nrPDB Length = 692 Score = 29.7 bits (65), Expect = 3.7, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 54/150 (36%), Gaps = 22/150 (14%) Query: 216 SFHQVSEVLSEEKSRLSISGWFHGPSLTRPPNYFEPPIPRSPHIPQD---------HEIL 266 SF ++V +E+ SIS FH P P + P + + + +D HE L Sbjct: 536 SFRNDTDVETED---YSISEIFHNPENGIFPQFVTPILCQKGFVTKDWKELKHSSKHERL 592 Query: 267 YDWINPTYLDMDYQVQIQEEFEESSEILLKEFLKPEKFTKVCEALEHGHVEWS-----SR 321 Y ++ ++ +F + + ++ K +K + S+ Sbjct: 593 YYYLKLISDRASGELPTTAKFFRNFVLQHPDYKHDSKISKSINYDLLSTCDRLTHLDDSK 652 Query: 322 GP----PNKRFYEKAEESKLPEILKECMKL 347 G E +++K P I +C KL Sbjct: 653 GELTSFLGAEIAEYVKKNK-PSIESKCDKL 681 >5LJV-A nrPDB Length = 347 Score = 29.7 bits (65), Expect = 3.7, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 36/99 (36%), Gaps = 4/99 (4%) Query: 256 SPHIPQDHEILYDWINPTYLDMDYQVQIQEEFEESSEILLKEFLKPEKFTKVCEALEHGH 315 +P + + Y+D Q I E E + E+F+ V E Sbjct: 173 KGTVPGPEDQVTLTKAGNYVDERLQNAILERHPELQMNVNVACAVKEQFSFVGTPTEVAS 232 Query: 316 VEWSSRGPPNKRFYEKAE----ESKLPEILKECMKLFRS 350 E+ + G P + + E+ +P+I++ L RS Sbjct: 233 FEFRAAGKPVRADVTEPVKIACEALMPDIIESIETLLRS 271 >1XFD-A nrPDB Length = 723 Score = 29.3 bits (64), Expect = 4.4, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 49/133 (36%), Gaps = 8/133 (6%) Query: 176 RSMGGTLDLYSIDEHFQPKQIVKSLIPSWNKLVFFEVSPVSFHQVSEVLSEEKSRLSISG 235 R GT+ L++++ + I I S + + E+SP + + E + S +G Sbjct: 33 REQKGTVRLWNVETNTSTVLIEGKKIESLRAIRY-EISPDREYALFSYNVEPIYQHSYTG 91 Query: 236 WF------HG-PSLTRPPNYFEPPIPRSPHIPQDHEILYDWINPTYLDMDYQVQIQEEFE 288 ++ HG P PP + + P+ ++++ + N Y Q Sbjct: 92 YYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVS 151 Query: 289 ESSEILLKEFLKP 301 E ++ L Sbjct: 152 TGKEGVIYNGLSD 164 >5ZHI-A nrPDB Length = 238 Score = 28.9 bits (63), Expect = 6.3, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 20/51 (39%), Gaps = 1/51 (1%) Query: 225 SEEKSRLSISGWFHGPSLTRPPNYFEPPIPRSPHIPQDHEILYDWINPTYL 275 ++ + G GPS TRP ++ +P + DH + W L Sbjct: 167 QDDSHSTGLDGLLEGPSYTRPASWRGLDVPEV-LLSGDHARIAAWRREVSL 216 >1LL6-A nrPDB Length = 392 Score = 28.5 bits (62), Expect = 6.6, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 40/130 (30%), Gaps = 37/130 (28%) Query: 228 KSRLSISGWFHGPSLTRPPNYFEPPIPRSPHIPQDHEILYDWINPTYLDMDYQVQIQEEF 287 K+ LSI GW + P+ P + E R D +++ ++ Sbjct: 88 KTLLSIGGWTYSPNFKTPASTEE---GRKKF------------------ADTSLKLMKDL 126 Query: 288 EESSEILLKEFLKPEKFTK-----------VCEALEHGH-----VEWSSRGPPNKRFYEK 331 + E+ + EK +A H + P + Y K Sbjct: 127 GFDGIDINWEYPEDEKQANDFVLLLKACREALDAYSAKHPNGKKFLLTIASPAGPQNYNK 186 Query: 332 AEESKLPEIL 341 + +++ + L Sbjct: 187 LKLAEMDKYL 196 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.310 0.129 0.366 Lambda K H 0.267 0.0401 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 22,205,698 Number of Sequences: 36641 Number of extensions: 906796 Number of successful extensions: 2404 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 27 Number of HSP's that attempted gapping in prelim test: 2369 Number of HSP's gapped (non-prelim): 44 length of query: 542 length of database: 10,336,785 effective HSP length: 102 effective length of query: 440 effective length of database: 6,599,403 effective search space: 2903737320 effective search space used: 2903737320 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 61 (28.1 bits)