BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= Q8A1G2
         (551 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3CKC-A nrPDB                                                         1098   0.0  
5E76-A nrPDB                                                           58   1e-08
5OET-B nrPDB                                                           32   0.79 
2WLX-A nrPDB                                                           32   0.88 
3SNO-A nrPDB                                                           31   1.2  
4A0G-A nrPDB                                                           30   3.2  
1XTP-A nrPDB                                                           29   5.3  
1SMS-A nrPDB                                                           29   6.4  

>3CKC-A nrPDB
          Length = 527

 Score = 1098 bits (2839), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 525/526 (99%), Positives = 526/526 (100%)

Query: 26  INDLDISPIDPQTGGSFDQQGVFVKGYAMLGVTGQKGIDGSPDLDGQDEGESGFYRTTFN 85
           INDLDISPIDPQTGGSFDQQGVFVKGYAMLGVTGQKGIDGSPDLDGQDEGESGFYRTTFN
Sbjct: 2   INDLDISPIDPQTGGSFDQQGVFVKGYAMLGVTGQKGIDGSPDLDGQDEGESGFYRTTFN 61

Query: 86  CNELPTDECLWAWQENQDIPQLTSISWSPSSQRTEWVYVRLGYDITQYNFFLDQTEGMTD 145
           CNELPTDECLWAWQ+NQDIPQLTSISWSPSSQRTEWVYVRLGYDITQYNFFLDQTEGMTD
Sbjct: 62  CNELPTDECLWAWQKNQDIPQLTSISWSPSSQRTEWVYVRLGYDITQYNFFLDQTEGMTD 121

Query: 146 AETLRQRAEIRFLRALHYWYFLDLFGKAPFKEHFSNDLPVEKKGTELYTYIQNELNEIEA 205
           AETLRQRAEIRFLRALHYWYFLDLFGKAPFKEHFSNDLPVEKKGTELYTYIQNELNEIEA
Sbjct: 122 AETLRQRAEIRFLRALHYWYFLDLFGKAPFKEHFSNDLPVEKKGTELYTYIQNELNEIEA 181

Query: 206 DMYEPRQAPFGRADKAANWLLRARLYLNAGVYTGQTDYAKAEEYASKVIGSAYKLCTNYS 265
           DMYEPRQAPFGRADKAANWLLRARLYLNAGVYTGQTDYAKAEEYASKVIGSAYKLCTNYS
Sbjct: 182 DMYEPRQAPFGRADKAANWLLRARLYLNAGVYTGQTDYAKAEEYASKVIGSAYKLCTNYS 241

Query: 266 ELFMADNDENENAMQEIILPIRQDGVKTRNYGGSTYLVCGTRVAGMPRMGTTNGWSCIFA 325
           ELFMADNDENENAMQEIILPIRQDGVKTRNYGGSTYLVCGTRVAGMPRMGTTNGWSCIFA
Sbjct: 242 ELFMADNDENENAMQEIILPIRQDGVKTRNYGGSTYLVCGTRVAGMPRMGTTNGWSCIFA 301

Query: 326 RAAMVQKFFSNLEDVPMLPADVEIPTKGLDTDEQIDAFDAEHGIRTEDMIKAAGDDRALL 385
           RAAMVQKFFSNLEDVPMLPADVEIPTKGLDTDEQIDAFDAEHGIRTEDMIKAAGDDRALL
Sbjct: 302 RAAMVQKFFSNLEDVPMLPADVEIPTKGLDTDEQIDAFDAEHGIRTEDMIKAAGDDRALL 361

Query: 386 YSGVGGGRRKIQTDAISGFTDGLSIVKWQNYRSDGKPVSHATYPDTDIPLFRLAEAYLTR 445
           YSGVGGGRRKIQTDAISGFTDGLSIVKWQNYRSDGKPVSHATYPDTDIPLFRLAEAYLTR
Sbjct: 362 YSGVGGGRRKIQTDAISGFTDGLSIVKWQNYRSDGKPVSHATYPDTDIPLFRLAEAYLTR 421

Query: 446 AEAIFRQGGDATGDINELRKRANCTRKVQTVTEQELIDEWAREFYLEGRRRSDLVRFGMF 505
           AEAIFRQGGDATGDINELRKRANCTRKVQTVTEQELIDEWAREFYLEGRRRSDLVRFGMF
Sbjct: 422 AEAIFRQGGDATGDINELRKRANCTRKVQTVTEQELIDEWAREFYLEGRRRSDLVRFGMF 481

Query: 506 TTNKYLWDWKGGAMNGTSVASYYNKYPIPVSDINNNRNMSQNEGYK 551
           TTNKYLWDWKGGAMNGTSVASYYNKYPIPVSDINNNRNMSQNEGYK
Sbjct: 482 TTNKYLWDWKGGAMNGTSVASYYNKYPIPVSDINNNRNMSQNEGYK 527


>5E76-A nrPDB
          Length = 511

 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 102/396 (25%), Positives = 157/396 (39%), Gaps = 77/396 (19%)

Query: 139 QTEG-MTDAETLRQRAEIRFLRALHYWYFLDLFGKAPFKEHFSN--DLPVEKKGTE--LY 193
           QT+G +++A   +  AE R +RA  Y+Y L ++G     E      D PV     E  ++
Sbjct: 88  QTQGSVSEAAKTKAIAEARLMRACAYFYMLRIWGPVILIEDNQKLVDNPVRPLNREEDVF 147

Query: 194 TYIQNELNEIEADMYEPRQAPFGRADKAANWLLRARLYL-----NAGVYTGQTDYAKAEE 248
            +I N+LN    ++ E  Q+  GRA   A   + A++YL     N G    + D   A +
Sbjct: 148 QFIINDLNYAVDNLSE--QSDKGRATSWAAKGILAKVYLARSGWNNGGTRDEGDLELARQ 205

Query: 249 YASKVI-GSAYKLCTNYSELFMADNDENEN---AMQEIILPIRQDGVKTRNYGGSTYLVC 304
           YAS V   S   L TNY +LF   N+ N+    AMQ + L                +  C
Sbjct: 206 YASDVCENSGLDLMTNYEDLFKYKNNNNQESLLAMQWVPL--------------GEWYEC 251

Query: 305 GTRVAGMP----RMGTTNGWSCIFARAAMVQKFFSNLEDVPMLPADVEIPTKGLDTDEQI 360
            T ++ +       G  N WS       M+Q++    E    L  +    TKG       
Sbjct: 252 NTLLSDLAFSTEVTGGVNCWSSYNGSIDMLQQY----ELADTLRRNATFFTKG------- 300

Query: 361 DAFDAEHGIRTEDMIKAAGDDRALLYSGVGGGRRKIQTDAISGFTDGLSIVKWQNYRSDG 420
            ++ +   I+          D    Y G     +K     + G  D           +DG
Sbjct: 301 -SYYSYICIK----------DGGYTYKGTASPIKK----GVPGGPDD---------DNDG 336

Query: 421 KPVSHATYPDTDIPLFRLAEAYLTRAEAIFRQG-----GDATGDINELRKRANCTRKVQT 475
           K V     P  +  + RLA+ YLT AEA          G      N +R+RA   +K  +
Sbjct: 337 K-VKQMNSP-LNTYILRLADVYLTYAEACLGNNSTLSDGRGLYFFNRVRERAKINKK-SS 393

Query: 476 VTEQELIDEWAREFYLEGRRRSDLVRFGMFTTNKYL 511
           +T  ++I E   EF +E     D+V +  +  +K L
Sbjct: 394 ITLDDIIRERRVEFGMEYSNWYDMVTWFRYLPDKML 429


>5OET-B nrPDB
          Length = 525

 Score = 32.0 bits (71), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 12/61 (19%)

Query: 323 IFARAAMVQKFFSNLEDVPMLPADVEIPTKG--LDTDEQIDAFDAEHGIRTEDMIKAAGD 380
           +F +  MV+KFF+N E+  M  A  ++ TKG  +  DE +          TED+IK A +
Sbjct: 354 VFTKPGMVEKFFNNPEEEHMAEAIRKVQTKGWAIGKDEDL----------TEDIIKKATE 403

Query: 381 D 381
           +
Sbjct: 404 N 404


>2WLX-A nrPDB
          Length = 423

 Score = 31.6 bits (70), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 22/82 (26%)

Query: 356 TDEQIDAFDAEHGIRTE--------DMIKAAGDDRALLYSGVGGGRRKIQTDAISGFTDG 407
           +DEQ+ A  A+HGIR +        D+  AA   + +LY+GV   R            DG
Sbjct: 187 SDEQLKAMLAKHGIRHDTTVILYGRDVYAAARVAQIMLYAGVKDVR----------LLDG 236

Query: 408 LSIVKWQNYRSDGKPVSHATYP 429
                WQ +   G PV   T P
Sbjct: 237 ----GWQTWSDAGLPVERGTPP 254


>3SNO-A nrPDB
          Length = 315

 Score = 31.2 bits (69), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 18/79 (22%), Positives = 32/79 (40%), Gaps = 2/79 (2%)

Query: 244 AKAEEYASKVIGSAYKLCTNYSELFMADNDENENAMQEIILPIRQDGVKTRNYGGSTYLV 303
           AK   YA+ +    Y     + ++   D D         ++  + D ++T + GG   ++
Sbjct: 185 AKTLAYAANMAALRYAKSNGFDDVIFTDGDRVLEGATSTVVSFKGDKIRTPSPGGD--IL 242

Query: 304 CGTRVAGMPRMGTTNGWSC 322
            GT  A +    T  GW C
Sbjct: 243 PGTTQAALFAHATEKGWRC 261


>4A0G-A nrPDB
          Length = 831

 Score = 29.6 bits (65), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 10/26 (38%), Positives = 18/26 (69%)

Query: 280 QEIILPIRQDGVKTRNYGGSTYLVCG 305
           + +++ +R+DG+ TR  G   YL+CG
Sbjct: 781 KSLLIMLREDGIFTRPLGNVIYLMCG 806


>1XTP-A nrPDB
          Length = 254

 Score = 29.3 bits (64), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 3/51 (5%)

Query: 171 GKAPFKEHFSNDLPVEKKGTELYTYIQNE---LNEIEADMYEPRQAPFGRA 218
           G  P KE  S +LP+  + T   TY   +     E+  D+Y+P +  +G+A
Sbjct: 3   GSMPSKEASSRNLPISGRDTNGKTYRSTDEMWKAELTGDLYDPEKGWYGKA 53


>1SMS-A nrPDB
          Length = 345

 Score = 28.9 bits (63), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 14/25 (56%), Positives = 19/25 (76%), Gaps = 3/25 (12%)

Query: 176 KEHFSNDLPVEKKGTEL---YTYIQ 197
           KE++SN LPVEK G +L   +TYI+
Sbjct: 255 KEYYSNSLPVEKFGMDLKSIHTYIE 279


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

3CKC-A nrPDB                                                          968   0.0  
5E76-A nrPDB                                                          416   e-116

Sequences not found previously or not previously below threshold:

3SZE-A nrPDB                                                           33   0.41 
5IFZ-A nrPDB                                                           32   0.49 
1IZM-A nrPDB                                                           31   1.5  
4G4S-P nrPDB                                                           29   5.5  
5IVU-A nrPDB                                                           29   6.5  


CONVERGED!
>3CKC-A nrPDB
          Length = 527

 Score =  968 bits (2501), Expect = 0.0,   Method: Composition-based stats.
 Identities = 525/526 (99%), Positives = 526/526 (100%)

Query: 26  INDLDISPIDPQTGGSFDQQGVFVKGYAMLGVTGQKGIDGSPDLDGQDEGESGFYRTTFN 85
           INDLDISPIDPQTGGSFDQQGVFVKGYAMLGVTGQKGIDGSPDLDGQDEGESGFYRTTFN
Sbjct: 2   INDLDISPIDPQTGGSFDQQGVFVKGYAMLGVTGQKGIDGSPDLDGQDEGESGFYRTTFN 61

Query: 86  CNELPTDECLWAWQENQDIPQLTSISWSPSSQRTEWVYVRLGYDITQYNFFLDQTEGMTD 145
           CNELPTDECLWAWQ+NQDIPQLTSISWSPSSQRTEWVYVRLGYDITQYNFFLDQTEGMTD
Sbjct: 62  CNELPTDECLWAWQKNQDIPQLTSISWSPSSQRTEWVYVRLGYDITQYNFFLDQTEGMTD 121

Query: 146 AETLRQRAEIRFLRALHYWYFLDLFGKAPFKEHFSNDLPVEKKGTELYTYIQNELNEIEA 205
           AETLRQRAEIRFLRALHYWYFLDLFGKAPFKEHFSNDLPVEKKGTELYTYIQNELNEIEA
Sbjct: 122 AETLRQRAEIRFLRALHYWYFLDLFGKAPFKEHFSNDLPVEKKGTELYTYIQNELNEIEA 181

Query: 206 DMYEPRQAPFGRADKAANWLLRARLYLNAGVYTGQTDYAKAEEYASKVIGSAYKLCTNYS 265
           DMYEPRQAPFGRADKAANWLLRARLYLNAGVYTGQTDYAKAEEYASKVIGSAYKLCTNYS
Sbjct: 182 DMYEPRQAPFGRADKAANWLLRARLYLNAGVYTGQTDYAKAEEYASKVIGSAYKLCTNYS 241

Query: 266 ELFMADNDENENAMQEIILPIRQDGVKTRNYGGSTYLVCGTRVAGMPRMGTTNGWSCIFA 325
           ELFMADNDENENAMQEIILPIRQDGVKTRNYGGSTYLVCGTRVAGMPRMGTTNGWSCIFA
Sbjct: 242 ELFMADNDENENAMQEIILPIRQDGVKTRNYGGSTYLVCGTRVAGMPRMGTTNGWSCIFA 301

Query: 326 RAAMVQKFFSNLEDVPMLPADVEIPTKGLDTDEQIDAFDAEHGIRTEDMIKAAGDDRALL 385
           RAAMVQKFFSNLEDVPMLPADVEIPTKGLDTDEQIDAFDAEHGIRTEDMIKAAGDDRALL
Sbjct: 302 RAAMVQKFFSNLEDVPMLPADVEIPTKGLDTDEQIDAFDAEHGIRTEDMIKAAGDDRALL 361

Query: 386 YSGVGGGRRKIQTDAISGFTDGLSIVKWQNYRSDGKPVSHATYPDTDIPLFRLAEAYLTR 445
           YSGVGGGRRKIQTDAISGFTDGLSIVKWQNYRSDGKPVSHATYPDTDIPLFRLAEAYLTR
Sbjct: 362 YSGVGGGRRKIQTDAISGFTDGLSIVKWQNYRSDGKPVSHATYPDTDIPLFRLAEAYLTR 421

Query: 446 AEAIFRQGGDATGDINELRKRANCTRKVQTVTEQELIDEWAREFYLEGRRRSDLVRFGMF 505
           AEAIFRQGGDATGDINELRKRANCTRKVQTVTEQELIDEWAREFYLEGRRRSDLVRFGMF
Sbjct: 422 AEAIFRQGGDATGDINELRKRANCTRKVQTVTEQELIDEWAREFYLEGRRRSDLVRFGMF 481

Query: 506 TTNKYLWDWKGGAMNGTSVASYYNKYPIPVSDINNNRNMSQNEGYK 551
           TTNKYLWDWKGGAMNGTSVASYYNKYPIPVSDINNNRNMSQNEGYK
Sbjct: 482 TTNKYLWDWKGGAMNGTSVASYYNKYPIPVSDINNNRNMSQNEGYK 527


>5E76-A nrPDB
          Length = 511

 Score =  416 bits (1069), Expect = e-116,   Method: Composition-based stats.
 Identities = 102/396 (25%), Positives = 157/396 (39%), Gaps = 77/396 (19%)

Query: 139 QTEG-MTDAETLRQRAEIRFLRALHYWYFLDLFGKAPFKEHFSN--DLPVEKKGTE--LY 193
           QT+G +++A   +  AE R +RA  Y+Y L ++G     E      D PV     E  ++
Sbjct: 88  QTQGSVSEAAKTKAIAEARLMRACAYFYMLRIWGPVILIEDNQKLVDNPVRPLNREEDVF 147

Query: 194 TYIQNELNEIEADMYEPRQAPFGRADKAANWLLRARLYL-----NAGVYTGQTDYAKAEE 248
            +I N+LN    ++ E  Q+  GRA   A   + A++YL     N G    + D   A +
Sbjct: 148 QFIINDLNYAVDNLSE--QSDKGRATSWAAKGILAKVYLARSGWNNGGTRDEGDLELARQ 205

Query: 249 YASKVI-GSAYKLCTNYSELFMADNDENEN---AMQEIILPIRQDGVKTRNYGGSTYLVC 304
           YAS V   S   L TNY +LF   N+ N+    AMQ + L                +  C
Sbjct: 206 YASDVCENSGLDLMTNYEDLFKYKNNNNQESLLAMQWVPL--------------GEWYEC 251

Query: 305 GTRVAGMP----RMGTTNGWSCIFARAAMVQKFFSNLEDVPMLPADVEIPTKGLDTDEQI 360
            T ++ +       G  N WS       M+Q++    E    L  +    TKG       
Sbjct: 252 NTLLSDLAFSTEVTGGVNCWSSYNGSIDMLQQY----ELADTLRRNATFFTKG------- 300

Query: 361 DAFDAEHGIRTEDMIKAAGDDRALLYSGVGGGRRKIQTDAISGFTDGLSIVKWQNYRSDG 420
            ++ +   I+          D    Y G     +K     + G  D           +DG
Sbjct: 301 -SYYSYICIK----------DGGYTYKGTASPIKK----GVPGGPDD---------DNDG 336

Query: 421 KPVSHATYPDTDIPLFRLAEAYLTRAEAIFRQG-----GDATGDINELRKRANCTRKVQT 475
           K V     P  +  + RLA+ YLT AEA          G      N +R+RA   +K  +
Sbjct: 337 K-VKQMNSP-LNTYILRLADVYLTYAEACLGNNSTLSDGRGLYFFNRVRERAKINKK-SS 393

Query: 476 VTEQELIDEWAREFYLEGRRRSDLVRFGMFTTNKYL 511
           +T  ++I E   EF +E     D+V +  +  +K L
Sbjct: 394 ITLDDIIRERRVEFGMEYSNWYDMVTWFRYLPDKML 429


>3SZE-A nrPDB
          Length = 968

 Score = 32.8 bits (73), Expect = 0.41,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 51/140 (36%), Gaps = 8/140 (5%)

Query: 323 IFARAAMVQKFFSNLEDVPMLPADVEIPTKGLDTDEQIDAFDAEHGIRTEDMIKAAGDDR 382
           I     ++Q   +  E+  +      I   G+DT   I   + +  ++      A   D 
Sbjct: 470 INGNLDVLQHHETKKENRRL------ILDGGVDTTNDISLRNTQLSMQGHATEHAIYRDG 523

Query: 383 ALLYSGVGGGRRKIQTDAISGF--TDGLSIVKWQNYRSDGKPVSHATYPDTDIPLFRLAE 440
           A   S     R    +D ++G   T+  ++ +  N       VS  + PD +   FR   
Sbjct: 524 AFSCSLPAPMRFLCGSDYVAGMQNTEADAVKQNGNAYKTNNAVSDLSQPDWETGTFRFGT 583

Query: 441 AYLTRAEAIFRQGGDATGDI 460
            +L  ++    +  +  GDI
Sbjct: 584 LHLENSDFSVGRNANVIGDI 603


>5IFZ-A nrPDB
          Length = 172

 Score = 32.4 bits (72), Expect = 0.49,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 46/114 (40%), Gaps = 8/114 (7%)

Query: 356 TDEQIDAFDAEHGIRTEDMIKAAGDDRALLYSGVGGGRRKIQTDAISGFTDGLSIVKWQN 415
           TD   DAF A    R    +     DRA+L  G G G   I  + + G    L+   +  
Sbjct: 55  TDAGADAFYANLSDRVASAVLDGTYDRAILVCGTGIGV-CIAANKVPGIRAALTHDTYSA 113

Query: 416 YR---SDGKPVSHATYPDTDIPLFR-LAEAYLTRAEAIFRQGGDATGDINELRK 465
            R   S+   +           + + +A+A+L +    F + G + G++N + +
Sbjct: 114 ERAALSNNAQIITMGARVIGAEVAKTIADAFLAQT---FDENGRSAGNVNAINE 164


>1IZM-A nrPDB
          Length = 184

 Score = 30.8 bits (68), Expect = 1.5,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 35/102 (34%), Gaps = 12/102 (11%)

Query: 174 PFKEHFSNDLPVEKKG-----TELYTYIQNELNEIEADMYE----PRQAPFGRADK---A 221
           P    FSND      G     TELY  I   L+++E   +E      +  F +AD     
Sbjct: 45  PLLYQFSNDNHAYPTGLVQPVTELYEQISQTLSDVEGFTFELGLTEDENVFTQADSLSDW 104

Query: 222 ANWLLRARLYLNAGVYTGQTDYAKAEEYASKVIGSAYKLCTN 263
           AN  L         +   + +  +A +    +    Y    N
Sbjct: 105 ANQFLLGIGLAQPELAKEKGEIGEAVDDLQDICQLGYDEDDN 146


>4G4S-P nrPDB
          Length = 269

 Score = 28.9 bits (63), Expect = 5.5,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 5/65 (7%)

Query: 103 DIPQLTSISWSPSSQRTEWVYVRL--GYDITQYNFFLDQTEGMTDAETLRQRAEIRFLRA 160
           +IPQL SI W  +SQ  EW Y+       + ++   LD+ E  +D+  L + A++++  A
Sbjct: 15  NIPQL-SIDWLLNSQANEWEYLEALDSKYLVEFVGPLDRPEDGSDS--LYKDADMKYSSA 71

Query: 161 LHYWY 165
           L  +Y
Sbjct: 72  LEVFY 76


>5IVU-A nrPDB
          Length = 141

 Score = 28.9 bits (63), Expect = 6.5,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 8/41 (19%)

Query: 88  ELPTDECLWA-----WQENQDI---PQLTSISWSPSSQRTE 120
           +LP DEC WA     +++ +      +LT +SW+P S + +
Sbjct: 57  DLPEDECRWAVYDLEYEKEEGAGKRNKLTFVSWAPDSAKMK 97


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.312    0.131    0.374 

Lambda     K      H
   0.267   0.0381    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,639,172
Number of Sequences: 36641
Number of extensions: 930074
Number of successful extensions: 1991
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 1966
Number of HSP's gapped (non-prelim): 26
length of query: 551
length of database: 10,336,785
effective HSP length: 102
effective length of query: 449
effective length of database: 6,599,403
effective search space: 2963131947
effective search space used: 2963131947
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.4 bits)
S2: 61 (28.2 bits)