BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q86U44 (580 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5TEY-A nrPDB 1204 0.0 5L6E-A nrPDB 486 e-138 6N2Y-b2 nrPDB 30 2.6 6N2Z-b1 nrPDB 30 2.9 3P2N-A nrPDB 30 3.1 1NPT-O nrPDB 30 3.5 >5TEY-A nrPDB Length = 598 Score = 1204 bits (3114), Expect = 0.0, Method: Compositional matrix adjust. Identities = 579/580 (99%), Positives = 580/580 (100%) Query: 1 MSDTWSSIQAHKKQLDSLRERLQRRRKQDSGHLDLRNPEAALSPTFRSDSPVPTAPTSGG 60 MSDTWSSIQAHKKQLDSLRERLQRRRKQDSGHLDLRNPEAALSPTFRSDSPVPTAPTSGG Sbjct: 19 MSDTWSSIQAHKKQLDSLRERLQRRRKQDSGHLDLRNPEAALSPTFRSDSPVPTAPTSGG 78 Query: 61 PKPSTASAVPELATDPELEKKLLHHLSDLALTLPTDAVSICLAISTPDAPATQDGVESLL 120 PKPSTASAVPELATDPELEKKLLHHLSDLALTLPTDAVSICLAISTPDAPATQDGVESLL Sbjct: 79 PKPSTASAVPELATDPELEKKLLHHLSDLALTLPTDAVSICLAISTPDAPATQDGVESLL 138 Query: 121 QKFAAQELIEVKRGLLQDDAHPTLVTYADHSKLSAMMGAVAEKKGPGEVAGTVTGQKRRA 180 QKFAAQELIEVKRGLLQDDAHPTLVTYADHSKLSAMMGAVAEKKGPGEVAGTVTGQKRRA Sbjct: 139 QKFAAQELIEVKRGLLQDDAHPTLVTYADHSKLSAMMGAVAEKKGPGEVAGTVTGQKRRA 198 Query: 181 EQDSTTVAAFASSLVSGLNSSASEPAKEPAKKSRKHAASDVDLEIESLLNQQSTKEQQSK 240 EQDSTTVAAFASSLVSGLNSSASEPAKEPAKKSRKHAASDVDLEIESLLNQQSTKEQQSK Sbjct: 199 EQDSTTVAAFASSLVSGLNSSASEPAKEPAKKSRKHAASDVDLEIESLLNQQSTKEQQSK 258 Query: 241 KVSQEILELLNTTTAKEQSIVEKFRSRGRAQVQEFCDYGTKEECMKASDADRPCRKLHFR 300 KVSQEILELLNTTTAKEQSIVEKFRSRGRAQVQEFCDYGTKEECMKASDADRPCRKLHFR Sbjct: 259 KVSQEILELLNTTTAKEQSIVEKFRSRGRAQVQEFCDYGTKEECMKASDADRPCRKLHFR 318 Query: 301 RIINKHTDESLGDCSFLNTCFHMDTCKYVHYEIDACMDSEAPGSKDHTPSQELALTQSVG 360 RIINKHTDESLGDCSFLNTCFHMDTCKYVHYEIDACMDSEAPGSKDHTPSQELALTQSVG Sbjct: 319 RIINKHTDESLGDCSFLNTCFHMDTCKYVHYEIDACMDSEAPGSKDHTPSQELALTQSVG 378 Query: 361 GDSSADRLFPPQWICCDIRYLDVSILGKFAVVMADPPWDIHMELPYGTLTDDEMRRLNIP 420 GDSSADRLFPPQWICCDIRYLDVSILGKFAVVMADPPWDIHMELPYGTLTDDEMRRLNIP Sbjct: 379 GDSSADRLFPPQWICCDIRYLDVSILGKFAVVMADPPWDIHMELPYGTLTDDEMRRLNIP 438 Query: 421 VLQDDGFLFLWVTGRAMELGRECLNLWGYERVDEIIWVKTNQLQRIIRTGRTGHWLNHGK 480 VLQDDGFLFLWVTGRAMELGRECLNLWGYERVDEIIWVKTNQLQRIIRTGRTGHWLNHGK Sbjct: 439 VLQDDGFLFLWVTGRAMELGRECLNLWGYERVDEIIWVKTNQLQRIIRTGRTGHWLNHGK 498 Query: 481 EHCLVGVKGNPQGFNQGLDCDVIVAEVRSTSHKPDEIYGMIERLSPGTRKIELFGRPHNV 540 EHCLVGVKGNPQGFNQGLDCDVIVAEVRSTSHKPDEIYGMIERLSPGTRKIELFGRPHNV Sbjct: 499 EHCLVGVKGNPQGFNQGLDCDVIVAEVRSTSHKPDEIYGMIERLSPGTRKIELFGRPHNV 558 Query: 541 QPNWITLGNQLDGIHLLDPDVVARFKQRYPDGIISKPKNL 580 QPNWITLGNQLDGIHLLDPDVVARFKQ+YPDGIISKPKNL Sbjct: 559 QPNWITLGNQLDGIHLLDPDVVARFKQKYPDGIISKPKNL 598 >5L6E-A nrPDB Length = 227 Score = 486 bits (1252), Expect = e-138, Method: Compositional matrix adjust. Identities = 227/227 (100%), Positives = 227/227 (100%) Query: 354 ALTQSVGGDSSADRLFPPQWICCDIRYLDVSILGKFAVVMADPPWDIHMELPYGTLTDDE 413 ALTQSVGGDSSADRLFPPQWICCDIRYLDVSILGKFAVVMADPPWDIHMELPYGTLTDDE Sbjct: 1 ALTQSVGGDSSADRLFPPQWICCDIRYLDVSILGKFAVVMADPPWDIHMELPYGTLTDDE 60 Query: 414 MRRLNIPVLQDDGFLFLWVTGRAMELGRECLNLWGYERVDEIIWVKTNQLQRIIRTGRTG 473 MRRLNIPVLQDDGFLFLWVTGRAMELGRECLNLWGYERVDEIIWVKTNQLQRIIRTGRTG Sbjct: 61 MRRLNIPVLQDDGFLFLWVTGRAMELGRECLNLWGYERVDEIIWVKTNQLQRIIRTGRTG 120 Query: 474 HWLNHGKEHCLVGVKGNPQGFNQGLDCDVIVAEVRSTSHKPDEIYGMIERLSPGTRKIEL 533 HWLNHGKEHCLVGVKGNPQGFNQGLDCDVIVAEVRSTSHKPDEIYGMIERLSPGTRKIEL Sbjct: 121 HWLNHGKEHCLVGVKGNPQGFNQGLDCDVIVAEVRSTSHKPDEIYGMIERLSPGTRKIEL 180 Query: 534 FGRPHNVQPNWITLGNQLDGIHLLDPDVVARFKQRYPDGIISKPKNL 580 FGRPHNVQPNWITLGNQLDGIHLLDPDVVARFKQRYPDGIISKPKNL Sbjct: 181 FGRPHNVQPNWITLGNQLDGIHLLDPDVVARFKQRYPDGIISKPKNL 227 >6N2Y-b2 nrPDB Length = 168 Score = 30.0 bits (66), Expect = 2.6, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 40/81 (49%), Gaps = 8/81 (9%) Query: 194 LVSGLNSSASEPAKEPAKKSRKHAASDVDLEIESLLNQQSTKEQQSKKVSQEILELLNTT 253 L++ L A +P K+ +H A+++D Q + Q+++K+ +E EL+ + Sbjct: 21 LLALLRKFAWQPLMNIMKQREEHIANEID--------QAEKRRQEAEKLLEEQRELMKQS 72 Query: 254 TAKEQSIVEKFRSRGRAQVQE 274 + Q+++E R Q ++ Sbjct: 73 RQEAQALIENARKLAEEQKEQ 93 >6N2Z-b1 nrPDB Length = 168 Score = 30.0 bits (66), Expect = 2.9, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 40/81 (49%), Gaps = 8/81 (9%) Query: 194 LVSGLNSSASEPAKEPAKKSRKHAASDVDLEIESLLNQQSTKEQQSKKVSQEILELLNTT 253 L++ L A +P K+ +H A+++D Q + Q+++K+ +E EL+ + Sbjct: 21 LLALLRKFAWQPLMNIMKQREEHIANEID--------QAEKRRQEAEKLLEEQRELMKQS 72 Query: 254 TAKEQSIVEKFRSRGRAQVQE 274 + Q+++E R Q ++ Sbjct: 73 RQEAQALIENARKLAEEQKEQ 93 >3P2N-A nrPDB Length = 408 Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust. Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 2/31 (6%) Query: 350 SQELALTQSVGGDSSADRLFPPQWICCDIRY 380 S+ TQ GGD D++FP W CDI Y Sbjct: 113 SKSTGPTQGFGGDIEKDKVFP--WDRCDIWY 141 >1NPT-O nrPDB Length = 334 Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust. Identities = 38/150 (25%), Positives = 68/150 (45%), Gaps = 23/150 (15%) Query: 25 RRKQDSGHLDLRNPEAALSPTFRSDSPVPTAPTSGGPKPSTASAVPELATDPELEKKLLH 84 +R D H DLR AA ++S +PT T+G K + A +PEL Sbjct: 184 QRILDLPHKDLRRARAA------AESIIPT--TTGAAK-AVALVLPELKG---------- 224 Query: 85 HLSDLALTLPTDAVSICLAISTPDAPATQDGVESLLQKFAAQELIEVKRGLLQDDAHPTL 144 L+ +A+ +PT VS+ ++ + T + V + L+ A EL +G+L P + Sbjct: 225 KLNGMAMRVPTPNVSVVDLVAELEKEVTVEEVNAALKAAAEGEL----KGILAYSEEPLV 280 Query: 145 VTYADHSKLSAMMGAVAEKKGPGEVAGTVT 174 + S +S+ + A++ G++ V+ Sbjct: 281 SRDYNGSTVSSTIDALSTMVIDGKMVKVVS 310 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5TEY-A nrPDB 1229 0.0 5L6E-A nrPDB 524 e-149 Sequences not found previously or not previously below threshold: 3RUW-A nrPDB 39 0.006 3IYF-A nrPDB 37 0.017 1NPT-O nrPDB 35 0.090 4XD7-H nrPDB 33 0.26 4B2T-D nrPDB 30 2.5 CONVERGED! >5TEY-A nrPDB Length = 598 Score = 1229 bits (3179), Expect = 0.0, Method: Composition-based stats. Identities = 579/580 (99%), Positives = 580/580 (100%) Query: 1 MSDTWSSIQAHKKQLDSLRERLQRRRKQDSGHLDLRNPEAALSPTFRSDSPVPTAPTSGG 60 MSDTWSSIQAHKKQLDSLRERLQRRRKQDSGHLDLRNPEAALSPTFRSDSPVPTAPTSGG Sbjct: 19 MSDTWSSIQAHKKQLDSLRERLQRRRKQDSGHLDLRNPEAALSPTFRSDSPVPTAPTSGG 78 Query: 61 PKPSTASAVPELATDPELEKKLLHHLSDLALTLPTDAVSICLAISTPDAPATQDGVESLL 120 PKPSTASAVPELATDPELEKKLLHHLSDLALTLPTDAVSICLAISTPDAPATQDGVESLL Sbjct: 79 PKPSTASAVPELATDPELEKKLLHHLSDLALTLPTDAVSICLAISTPDAPATQDGVESLL 138 Query: 121 QKFAAQELIEVKRGLLQDDAHPTLVTYADHSKLSAMMGAVAEKKGPGEVAGTVTGQKRRA 180 QKFAAQELIEVKRGLLQDDAHPTLVTYADHSKLSAMMGAVAEKKGPGEVAGTVTGQKRRA Sbjct: 139 QKFAAQELIEVKRGLLQDDAHPTLVTYADHSKLSAMMGAVAEKKGPGEVAGTVTGQKRRA 198 Query: 181 EQDSTTVAAFASSLVSGLNSSASEPAKEPAKKSRKHAASDVDLEIESLLNQQSTKEQQSK 240 EQDSTTVAAFASSLVSGLNSSASEPAKEPAKKSRKHAASDVDLEIESLLNQQSTKEQQSK Sbjct: 199 EQDSTTVAAFASSLVSGLNSSASEPAKEPAKKSRKHAASDVDLEIESLLNQQSTKEQQSK 258 Query: 241 KVSQEILELLNTTTAKEQSIVEKFRSRGRAQVQEFCDYGTKEECMKASDADRPCRKLHFR 300 KVSQEILELLNTTTAKEQSIVEKFRSRGRAQVQEFCDYGTKEECMKASDADRPCRKLHFR Sbjct: 259 KVSQEILELLNTTTAKEQSIVEKFRSRGRAQVQEFCDYGTKEECMKASDADRPCRKLHFR 318 Query: 301 RIINKHTDESLGDCSFLNTCFHMDTCKYVHYEIDACMDSEAPGSKDHTPSQELALTQSVG 360 RIINKHTDESLGDCSFLNTCFHMDTCKYVHYEIDACMDSEAPGSKDHTPSQELALTQSVG Sbjct: 319 RIINKHTDESLGDCSFLNTCFHMDTCKYVHYEIDACMDSEAPGSKDHTPSQELALTQSVG 378 Query: 361 GDSSADRLFPPQWICCDIRYLDVSILGKFAVVMADPPWDIHMELPYGTLTDDEMRRLNIP 420 GDSSADRLFPPQWICCDIRYLDVSILGKFAVVMADPPWDIHMELPYGTLTDDEMRRLNIP Sbjct: 379 GDSSADRLFPPQWICCDIRYLDVSILGKFAVVMADPPWDIHMELPYGTLTDDEMRRLNIP 438 Query: 421 VLQDDGFLFLWVTGRAMELGRECLNLWGYERVDEIIWVKTNQLQRIIRTGRTGHWLNHGK 480 VLQDDGFLFLWVTGRAMELGRECLNLWGYERVDEIIWVKTNQLQRIIRTGRTGHWLNHGK Sbjct: 439 VLQDDGFLFLWVTGRAMELGRECLNLWGYERVDEIIWVKTNQLQRIIRTGRTGHWLNHGK 498 Query: 481 EHCLVGVKGNPQGFNQGLDCDVIVAEVRSTSHKPDEIYGMIERLSPGTRKIELFGRPHNV 540 EHCLVGVKGNPQGFNQGLDCDVIVAEVRSTSHKPDEIYGMIERLSPGTRKIELFGRPHNV Sbjct: 499 EHCLVGVKGNPQGFNQGLDCDVIVAEVRSTSHKPDEIYGMIERLSPGTRKIELFGRPHNV 558 Query: 541 QPNWITLGNQLDGIHLLDPDVVARFKQRYPDGIISKPKNL 580 QPNWITLGNQLDGIHLLDPDVVARFKQ+YPDGIISKPKNL Sbjct: 559 QPNWITLGNQLDGIHLLDPDVVARFKQKYPDGIISKPKNL 598 >5L6E-A nrPDB Length = 227 Score = 524 bits (1349), Expect = e-149, Method: Composition-based stats. Identities = 227/227 (100%), Positives = 227/227 (100%) Query: 354 ALTQSVGGDSSADRLFPPQWICCDIRYLDVSILGKFAVVMADPPWDIHMELPYGTLTDDE 413 ALTQSVGGDSSADRLFPPQWICCDIRYLDVSILGKFAVVMADPPWDIHMELPYGTLTDDE Sbjct: 1 ALTQSVGGDSSADRLFPPQWICCDIRYLDVSILGKFAVVMADPPWDIHMELPYGTLTDDE 60 Query: 414 MRRLNIPVLQDDGFLFLWVTGRAMELGRECLNLWGYERVDEIIWVKTNQLQRIIRTGRTG 473 MRRLNIPVLQDDGFLFLWVTGRAMELGRECLNLWGYERVDEIIWVKTNQLQRIIRTGRTG Sbjct: 61 MRRLNIPVLQDDGFLFLWVTGRAMELGRECLNLWGYERVDEIIWVKTNQLQRIIRTGRTG 120 Query: 474 HWLNHGKEHCLVGVKGNPQGFNQGLDCDVIVAEVRSTSHKPDEIYGMIERLSPGTRKIEL 533 HWLNHGKEHCLVGVKGNPQGFNQGLDCDVIVAEVRSTSHKPDEIYGMIERLSPGTRKIEL Sbjct: 121 HWLNHGKEHCLVGVKGNPQGFNQGLDCDVIVAEVRSTSHKPDEIYGMIERLSPGTRKIEL 180 Query: 534 FGRPHNVQPNWITLGNQLDGIHLLDPDVVARFKQRYPDGIISKPKNL 580 FGRPHNVQPNWITLGNQLDGIHLLDPDVVARFKQRYPDGIISKPKNL Sbjct: 181 FGRPHNVQPNWITLGNQLDGIHLLDPDVVARFKQRYPDGIISKPKNL 227 >3RUW-A nrPDB Length = 543 Score = 38.8 bits (89), Expect = 0.006, Method: Composition-based stats. Identities = 57/235 (24%), Positives = 97/235 (41%), Gaps = 37/235 (15%) Query: 78 LEKKLLHHLSDLALTLPTDAVSICLAISTPDAPATQ--------------DGVESLLQKF 123 ++K L+ L D+ +T D V+I +S + PA + DG + + Sbjct: 44 MDKMLVDDLGDVVVT--NDGVTILREMSV-EHPAAKMLIEVAKTQEKEVGDGTTTAV--V 98 Query: 124 AAQELIEVKRGLLQDDAHPTLVT---YADHSKLSAMMGAVAEKKGPGE-------VAGTV 173 A EL+ LL + HPT+V A K ++ +A + G + ++ Sbjct: 99 VAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIACEVGAQDKEILTKIAMTSI 158 Query: 174 TGQKRRAEQDSTTVAAFASSLVSGLNSSASEPAKEPAKKSRKHAAS--DVDLEIESLLNQ 231 TG + AE+ +A VS + + K+ K +K AS D +L L+++ Sbjct: 159 TG--KGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGASIDDTELIKGVLVDK 216 Query: 232 QSTKEQQSKKVSQEILELLNTTTA-KEQSIVEKFRSRGRAQVQEFCDYGTKEECM 285 + Q KKV+ + LLN KE + R A++ EF + +EE M Sbjct: 217 ERVSAQMPKKVTDAKIALLNCAIEIKETETDAEIRITDPAKLMEFIE---QEEKM 268 >3IYF-A nrPDB Length = 521 Score = 37.3 bits (85), Expect = 0.017, Method: Composition-based stats. Identities = 56/236 (23%), Positives = 98/236 (41%), Gaps = 40/236 (16%) Query: 78 LEKKLLHHLSDLALTLPTDAVSICLAISTPDAPATQ--------------DGVESLLQKF 123 ++K L+ L D+ +T D V+I +S + PA + DG + + Sbjct: 44 MDKMLVDDLGDVVVT--NDGVTILREMSV-EHPAAKMLIEVAKTQEKEVGDGTTTAV--V 98 Query: 124 AAQELIEVKRGLLQDDAHPTLVT---YADHSKLSAMMGAVAEKKGPGE-------VAGTV 173 A EL+ LL + HPT+V A K ++ +A + G + ++ Sbjct: 99 VAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIACEVGAQDKEILTKIAMTSI 158 Query: 174 TGQKRRAEQDSTTVAAFASSLVSGLNSSASEPAKEPAKKSRKHAAS--DVDLEIESLLNQ 231 TG + AE+ +A VS + + K+ K +K AS D +L L+++ Sbjct: 159 TG--KGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGASIDDTELIKGVLVDK 216 Query: 232 QSTKEQQSKKVSQEILELLNTT---TAKE--QSIVEKFRSRGRAQVQEFCDYGTKE 282 + Q KKV+ + LLN TA E + +V + ++ G + FC G + Sbjct: 217 ERVSAQMPKKVTDAKIALLNCAIEETASEMLKDMVAEIKASGANVL--FCQKGIDD 270 >1NPT-O nrPDB Length = 334 Score = 35.0 bits (79), Expect = 0.090, Method: Composition-based stats. Identities = 38/150 (25%), Positives = 68/150 (45%), Gaps = 23/150 (15%) Query: 25 RRKQDSGHLDLRNPEAALSPTFRSDSPVPTAPTSGGPKPSTASAVPELATDPELEKKLLH 84 +R D H DLR AA ++S +PT T+G K + A +PEL Sbjct: 184 QRILDLPHKDLRRARAA------AESIIPT--TTGAAK-AVALVLPELKGK--------- 225 Query: 85 HLSDLALTLPTDAVSICLAISTPDAPATQDGVESLLQKFAAQELIEVKRGLLQDDAHPTL 144 L+ +A+ +PT VS+ ++ + T + V + L+ A EL +G+L P + Sbjct: 226 -LNGMAMRVPTPNVSVVDLVAELEKEVTVEEVNAALKAAAEGEL----KGILAYSEEPLV 280 Query: 145 VTYADHSKLSAMMGAVAEKKGPGEVAGTVT 174 + S +S+ + A++ G++ V+ Sbjct: 281 SRDYNGSTVSSTIDALSTMVIDGKMVKVVS 310 >4XD7-H nrPDB Length = 133 Score = 33.4 bits (75), Expect = 0.26, Method: Composition-based stats. Identities = 36/145 (24%), Positives = 62/145 (42%), Gaps = 19/145 (13%) Query: 99 SICLAISTPDAPATQDGVESLLQKFAAQELIEVKRGLLQDDAHPTLVTYADHSKLSAMMG 158 +I +++ TPD P +D VE + K + EL G+L H LV + + Sbjct: 3 TIHVSVVTPDGPVYEDDVEMVSVKAKSGEL-----GILP--GHIPLVAPLE-------IS 48 Query: 159 AVAEKKGPGEVAGTVTGQKRRAEQDSTTVAAFASSLVSGLNSSASEPAKEPAKKSRKHAA 218 A KKG V+G D T+ A A+ ++ ++ AKE A++ + Sbjct: 49 AARLKKGGKTQYIAVSGGFLEVRPDKVTILAQAAERAEDIDVLRAKAAKERAERRLQSQQ 108 Query: 219 SDVD-----LEIESLLNQQSTKEQQ 238 D+D L ++ +N+ S E + Sbjct: 109 DDIDFKRAELALKRAMNRLSVAEMK 133 >4B2T-D nrPDB Length = 542 Score = 30.4 bits (67), Expect = 2.5, Method: Composition-based stats. Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 8/110 (7%) Query: 114 DGVESLLQKFAAQELIEVKRGLLQDDAHPTLVTYADHSKLSAMMGAVAEKKGPGEVAGTV 173 DG S++ A L++ LLQ HPT+++ + L + + + P E++ Sbjct: 107 DGTTSVV--IIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPVELSDRE 164 Query: 174 TGQKRRAEQDSTTVAAFASSLVSGLNSSASEPAKEPAKKSRKHAASDVDL 223 T A ++ V + SSL+S ++ A +PA A+ VDL Sbjct: 165 TLLNSAATSLNSKVVSQYSSLLSPMSVDAVMKVIDPA------TATSVDL 208 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.311 0.139 0.435 Lambda K H 0.267 0.0408 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 23,606,441 Number of Sequences: 36641 Number of extensions: 982339 Number of successful extensions: 2487 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 5 Number of HSP's successfully gapped in prelim test: 25 Number of HSP's that attempted gapping in prelim test: 2480 Number of HSP's gapped (non-prelim): 32 length of query: 580 length of database: 10,336,785 effective HSP length: 102 effective length of query: 478 effective length of database: 6,599,403 effective search space: 3154514634 effective search space used: 3154514634 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 62 (28.5 bits)