BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q86TU7 (594 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 6MBJ-A nrPDB 1234 0.0 6ICT-A nrPDB 1056 0.0 1OZV-A nrPDB 130 2e-30 3QXY-A nrPDB 76 3e-14 5FHY-A nrPDB 30 2.1 5U03-A nrPDB 30 2.4 6GYM-3 nrPDB 28 9.2 >6MBJ-A nrPDB Length = 599 Score = 1234 bits (3192), Expect = 0.0, Method: Compositional matrix adjust. Identities = 594/594 (100%), Positives = 594/594 (100%) Query: 1 MGKKSRVKTQKSGTGATATVSPKEILNLTSELLQKCSSPAPGPGKEWEEYVQIRTLVEKI 60 MGKKSRVKTQKSGTGATATVSPKEILNLTSELLQKCSSPAPGPGKEWEEYVQIRTLVEKI Sbjct: 6 MGKKSRVKTQKSGTGATATVSPKEILNLTSELLQKCSSPAPGPGKEWEEYVQIRTLVEKI 65 Query: 61 RKKQKGLSVTFDGKREDYFPDLMKWASENGASVEGFEMVNFKEEGFGLRATRDIKAEELF 120 RKKQKGLSVTFDGKREDYFPDLMKWASENGASVEGFEMVNFKEEGFGLRATRDIKAEELF Sbjct: 66 RKKQKGLSVTFDGKREDYFPDLMKWASENGASVEGFEMVNFKEEGFGLRATRDIKAEELF 125 Query: 121 LWVPRKLLMTVESAKNSVLGPLYSQDRILQAMGNIALAFHLLCERASPNSFWQPYIQTLP 180 LWVPRKLLMTVESAKNSVLGPLYSQDRILQAMGNIALAFHLLCERASPNSFWQPYIQTLP Sbjct: 126 LWVPRKLLMTVESAKNSVLGPLYSQDRILQAMGNIALAFHLLCERASPNSFWQPYIQTLP 185 Query: 181 SEYDTPLYFEEDEVRYLQSTQAIHDVFSQYKNTARQYAYFYKVIQTHPHANKLPLKDSFT 240 SEYDTPLYFEEDEVRYLQSTQAIHDVFSQYKNTARQYAYFYKVIQTHPHANKLPLKDSFT Sbjct: 186 SEYDTPLYFEEDEVRYLQSTQAIHDVFSQYKNTARQYAYFYKVIQTHPHANKLPLKDSFT 245 Query: 241 YEDYRWAVSSVMTRQNQIPTEDGSRVTLALIPLWDMCNHTNGLITTGYNLEDDRCECVAL 300 YEDYRWAVSSVMTRQNQIPTEDGSRVTLALIPLWDMCNHTNGLITTGYNLEDDRCECVAL Sbjct: 246 YEDYRWAVSSVMTRQNQIPTEDGSRVTLALIPLWDMCNHTNGLITTGYNLEDDRCECVAL 305 Query: 301 QDFRAGEQIYIFYGTRSNAEFVIHSGFFFDNNSHDRVKIKLGVSKSDRLYAMKAEVLARA 360 QDFRAGEQIYIFYGTRSNAEFVIHSGFFFDNNSHDRVKIKLGVSKSDRLYAMKAEVLARA Sbjct: 306 QDFRAGEQIYIFYGTRSNAEFVIHSGFFFDNNSHDRVKIKLGVSKSDRLYAMKAEVLARA 365 Query: 361 GIPTSSVFALHFTEPPISAQLLAFLRVFCMTEEELKEHLLGDSAIDRIFTLGNSEFPVSW 420 GIPTSSVFALHFTEPPISAQLLAFLRVFCMTEEELKEHLLGDSAIDRIFTLGNSEFPVSW Sbjct: 366 GIPTSSVFALHFTEPPISAQLLAFLRVFCMTEEELKEHLLGDSAIDRIFTLGNSEFPVSW 425 Query: 421 DNEVKLWTFLEDRASLLLKTYKTTIEEDKSVLKNHDLSVRAKMAIKLRLGEKEILEKAVK 480 DNEVKLWTFLEDRASLLLKTYKTTIEEDKSVLKNHDLSVRAKMAIKLRLGEKEILEKAVK Sbjct: 426 DNEVKLWTFLEDRASLLLKTYKTTIEEDKSVLKNHDLSVRAKMAIKLRLGEKEILEKAVK 485 Query: 481 SAAVNREYYRQQMEEKAPLPKYEESNLGLLESSVGDSRLPLVLRNLEEEAGVQDALNIRE 540 SAAVNREYYRQQMEEKAPLPKYEESNLGLLESSVGDSRLPLVLRNLEEEAGVQDALNIRE Sbjct: 486 SAAVNREYYRQQMEEKAPLPKYEESNLGLLESSVGDSRLPLVLRNLEEEAGVQDALNIRE 545 Query: 541 AISKAKATENGLVNGENSIPNGTRSENESLNQESKRAVEDAKGSSSDSTAGVKE 594 AISKAKATENGLVNGENSIPNGTRSENESLNQESKRAVEDAKGSSSDSTAGVKE Sbjct: 546 AISKAKATENGLVNGENSIPNGTRSENESLNQESKRAVEDAKGSSSDSTAGVKE 599 >6ICT-A nrPDB Length = 504 Score = 1056 bits (2732), Expect = 0.0, Method: Compositional matrix adjust. Identities = 503/503 (100%), Positives = 503/503 (100%) Query: 1 MGKKSRVKTQKSGTGATATVSPKEILNLTSELLQKCSSPAPGPGKEWEEYVQIRTLVEKI 60 MGKKSRVKTQKSGTGATATVSPKEILNLTSELLQKCSSPAPGPGKEWEEYVQIRTLVEKI Sbjct: 2 MGKKSRVKTQKSGTGATATVSPKEILNLTSELLQKCSSPAPGPGKEWEEYVQIRTLVEKI 61 Query: 61 RKKQKGLSVTFDGKREDYFPDLMKWASENGASVEGFEMVNFKEEGFGLRATRDIKAEELF 120 RKKQKGLSVTFDGKREDYFPDLMKWASENGASVEGFEMVNFKEEGFGLRATRDIKAEELF Sbjct: 62 RKKQKGLSVTFDGKREDYFPDLMKWASENGASVEGFEMVNFKEEGFGLRATRDIKAEELF 121 Query: 121 LWVPRKLLMTVESAKNSVLGPLYSQDRILQAMGNIALAFHLLCERASPNSFWQPYIQTLP 180 LWVPRKLLMTVESAKNSVLGPLYSQDRILQAMGNIALAFHLLCERASPNSFWQPYIQTLP Sbjct: 122 LWVPRKLLMTVESAKNSVLGPLYSQDRILQAMGNIALAFHLLCERASPNSFWQPYIQTLP 181 Query: 181 SEYDTPLYFEEDEVRYLQSTQAIHDVFSQYKNTARQYAYFYKVIQTHPHANKLPLKDSFT 240 SEYDTPLYFEEDEVRYLQSTQAIHDVFSQYKNTARQYAYFYKVIQTHPHANKLPLKDSFT Sbjct: 182 SEYDTPLYFEEDEVRYLQSTQAIHDVFSQYKNTARQYAYFYKVIQTHPHANKLPLKDSFT 241 Query: 241 YEDYRWAVSSVMTRQNQIPTEDGSRVTLALIPLWDMCNHTNGLITTGYNLEDDRCECVAL 300 YEDYRWAVSSVMTRQNQIPTEDGSRVTLALIPLWDMCNHTNGLITTGYNLEDDRCECVAL Sbjct: 242 YEDYRWAVSSVMTRQNQIPTEDGSRVTLALIPLWDMCNHTNGLITTGYNLEDDRCECVAL 301 Query: 301 QDFRAGEQIYIFYGTRSNAEFVIHSGFFFDNNSHDRVKIKLGVSKSDRLYAMKAEVLARA 360 QDFRAGEQIYIFYGTRSNAEFVIHSGFFFDNNSHDRVKIKLGVSKSDRLYAMKAEVLARA Sbjct: 302 QDFRAGEQIYIFYGTRSNAEFVIHSGFFFDNNSHDRVKIKLGVSKSDRLYAMKAEVLARA 361 Query: 361 GIPTSSVFALHFTEPPISAQLLAFLRVFCMTEEELKEHLLGDSAIDRIFTLGNSEFPVSW 420 GIPTSSVFALHFTEPPISAQLLAFLRVFCMTEEELKEHLLGDSAIDRIFTLGNSEFPVSW Sbjct: 362 GIPTSSVFALHFTEPPISAQLLAFLRVFCMTEEELKEHLLGDSAIDRIFTLGNSEFPVSW 421 Query: 421 DNEVKLWTFLEDRASLLLKTYKTTIEEDKSVLKNHDLSVRAKMAIKLRLGEKEILEKAVK 480 DNEVKLWTFLEDRASLLLKTYKTTIEEDKSVLKNHDLSVRAKMAIKLRLGEKEILEKAVK Sbjct: 422 DNEVKLWTFLEDRASLLLKTYKTTIEEDKSVLKNHDLSVRAKMAIKLRLGEKEILEKAVK 481 Query: 481 SAAVNREYYRQQMEEKAPLPKYE 503 SAAVNREYYRQQMEEKAPLPKYE Sbjct: 482 SAAVNREYYRQQMEEKAPLPKYE 504 >1OZV-A nrPDB Length = 444 Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 114/411 (27%), Positives = 194/411 (47%), Gaps = 40/411 (9%) Query: 84 KWASENGASVEGFEM-VNFKEEGFGLRATRDIKAEELFLWVPRKLLMTVESAKNSVLGPL 142 KW E G + + EG GL A +DI ++ L VP++L + ++ S +G + Sbjct: 15 KWLQEEGVITAKTPVKASVVTEGLGLVALKDISRNDVILQVPKRLWINPDAVAASEIGRV 74 Query: 143 YSQDRILQAMGNIALAFHLLCERASPNSFWQPYIQTLPSEYDTPLYFEEDEVRYLQSTQA 202 S+ + +++ L+ ER+ +S W+ Y LP E D+ +Y+ E+E++ LQ +Q Sbjct: 75 CSELKPW-----LSVILFLIRERSREDSVWKHYFGILPQETDSTIYWSEEELQELQGSQL 129 Query: 203 IHDVFSQYKNTARQYAYFYKVIQTHPHANKLPLKDSFTYEDYRWAVSSVMTRQ-NQIPTE 261 + S + + K+ Q NK D T +D+ WA + +R +++ E Sbjct: 130 LKTTVSVKEYVKNE---CLKLEQEIILPNKRLFPDPVTLDDFFWAFGILRSRAFSRLRNE 186 Query: 262 DGSRVTLALIPLWDMCNHTNGLITTGYNLEDDRCECVALQDF----------RAGEQIYI 311 + L ++P+ D+ NH+ G+ T + E + D+ +AGEQ+YI Sbjct: 187 N-----LVVVPMADLINHSAGVTTEDHAYEVKGAAGLFSWDYLFSLKSPLSVKAGEQVYI 241 Query: 312 FYG-TRSNAEFVIHSGFFFDNNSHDRVKIKLGVSKSDRLYAMKAEVLARAGIPTSSVFAL 370 Y +SNAE + GF N + + L +S+SD + K +V G ++ F + Sbjct: 242 QYDLNKSNAELALDYGFIEPNENRHAYTLTLEISESDPFFDDKLDVAESNGFAQTAYFDI 301 Query: 371 HF--TEPPISAQLLAFLRVFCM--TEEELKEHLLGDSAIDRIFTLGNSEFPVSWDNEVKL 426 + T PP LL +LR+ + T+ L E L D+ G+ E VS DNE L Sbjct: 302 FYNRTLPP---GLLPYLRLVALGGTDAFLLESLFRDT------IWGHLELSVSRDNEELL 352 Query: 427 WTFLEDRASLLLKTYKTTIEEDKSVLKNHDLSVRAKMAIKLRLGEKEILEK 477 + + L Y TTIE+D+ LK +L R +A+ +R GEK +L++ Sbjct: 353 CKAVREACKSALAGYHTTIEQDRE-LKEGNLDSRLAIAVGIREGEKMVLQQ 402 >3QXY-A nrPDB Length = 449 Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 107/412 (25%), Positives = 173/412 (41%), Gaps = 51/412 (12%) Query: 105 GFGLRATRDIKAEELFLWVPRKLLMTVESAKNSVLGPLYSQDRI-LQAM-GNIALAFHLL 162 G+G+ A ++A EL VPR L+ S +G L ++R+ LQ+ G + L LL Sbjct: 50 GYGMVARESVQAGELLFVVPRAALL---SQHTCSIGGLLERERVALQSQSGWVPLLLALL 106 Query: 163 CERASPNSFWQPYIQTLP--SEYDTPLYFEEDEVR-YLQSTQAIHDVFSQYKNTARQY-A 218 E +P S W+PY P + P+++ E+E R LQ T V N +Y + Sbjct: 107 HELQAPASRWRPYFALWPELGRLEHPMFWPEEERRCLLQGTGVPEAVEKDLANIRSEYQS 166 Query: 219 YFYKVIQTHPHANKLPLKDSFTYEDYRWAVSSVMTRQNQIPTEDGSRV----TLALIPLW 274 ++ HP L ++ + E Y V+ VM Q P E+ + ++P Sbjct: 167 IVLPFMEAHPDLFSLRVR---SLELYHQLVALVMAYSFQEPLEEEEDEKEPNSPVMVPAA 223 Query: 275 DMCNHTNGLITTGYNLE-DDRC-ECVALQDFRAGEQIYIFYGTRSNAEFVIHSGFF--FD 330 D+ NH L NLE C VA Q G +I+ YG +N + + GF + Sbjct: 224 DILNH---LANHNANLEYSANCLRMVATQPIPKGHEIFNTYGQMANWQLIHMYGFVEPYP 280 Query: 331 NNSHDRVKIKLGVSKSDRLYAMKAE------------VLARAGIPTSSVFALHFTEPPIS 378 +N+ D I++ + L K E + + F + E Sbjct: 281 DNTDDTADIQMVTVREAALQGTKTEAERHLVYERWDFLCKLEMVGEEGAFVIGREEVLTE 340 Query: 379 AQLLAFLRVFCMTEEELKEHLLGDSAIDR-----IFTLGN-SEFPVSWDNEVKLWTFLED 432 +L L+V CM EE +E D D T+ N + SW L++ Sbjct: 341 EELTTTLKVLCMPAEEFRELKDQDGGGDDKREEGSLTITNIPKLKASWRQ------LLQN 394 Query: 433 RASLLLKTYKTTIEEDKSVLKNHD----LSVRAKMAIKLRLGEKEILEKAVK 480 L L+TY T ++ D+ +L N + LS R + A+++R G+K IL + ++ Sbjct: 395 SVLLTLQTYATDLKTDQGLLSNKEVYAKLSWREQQALQVRYGQKMILHQLLE 446 >5FHY-A nrPDB Length = 346 Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust. Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 11/79 (13%) Query: 470 GEKEILEKAVKSAAVNREYYRQ----QMEEKAPL-----PKYEESNLGLLESSVGDSRLP 520 G ++IL+ + +AV Y Q K L P + N G L SVGD++LP Sbjct: 18 GNEDILKASATQSAVAGTYQIQVNSLATSSKIALQAIADPANAKFNSGTLNISVGDTKLP 77 Query: 521 LVLRNLEEE--AGVQDALN 537 + + AG++DA+N Sbjct: 78 AITVDSSNNTLAGMRDAIN 96 >5U03-A nrPDB Length = 591 Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust. Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 6/62 (9%) Query: 261 EDGSRVTLALIPLWDMCNHTNGLITTGYNLEDDRCECVALQDFRAGEQIYIFYGTRSNAE 320 E+ R + P+W C GL G ++E +R E V L+D F G + + E Sbjct: 475 EERHRHRFEVNPVWKKCLEEQGLKFVGQDVEGERMEIVELEDHP------FFVGVQYHPE 528 Query: 321 FV 322 F+ Sbjct: 529 FL 530 >6GYM-3 nrPDB Length = 321 Score = 28.5 bits (62), Expect = 9.2, Method: Compositional matrix adjust. Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 11/64 (17%) Query: 398 HLLGDSAIDRIFTLGNSEFPVSWDNEVKLWTFLEDRASLLLKTYKTTIEEDKSVLKNHDL 457 H + +S +DRIF+LG ++ P +++ L +KT I +D V K D+ Sbjct: 36 HRICESCVDRIFSLGPAQCPYKGCDKI-----------LRKNKFKTQIFDDVEVEKEVDI 84 Query: 458 SVRA 461 R Sbjct: 85 RKRV 88 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 6MBJ-A nrPDB 1020 0.0 6ICT-A nrPDB 849 0.0 1OZV-A nrPDB 499 e-141 3QXY-A nrPDB 414 e-116 Sequences not found previously or not previously below threshold: 1X3S-A nrPDB 34 0.24 1CJS-A nrPDB 32 0.75 3BH4-A nrPDB 31 1.9 2AH6-A nrPDB 31 2.1 2DU7-A nrPDB 30 2.6 5HTF-A nrPDB 29 4.9 5FHY-A nrPDB 29 5.1 1MMF-A nrPDB 29 7.0 CONVERGED! >6MBJ-A nrPDB Length = 599 Score = 1020 bits (2636), Expect = 0.0, Method: Composition-based stats. Identities = 594/594 (100%), Positives = 594/594 (100%) Query: 1 MGKKSRVKTQKSGTGATATVSPKEILNLTSELLQKCSSPAPGPGKEWEEYVQIRTLVEKI 60 MGKKSRVKTQKSGTGATATVSPKEILNLTSELLQKCSSPAPGPGKEWEEYVQIRTLVEKI Sbjct: 6 MGKKSRVKTQKSGTGATATVSPKEILNLTSELLQKCSSPAPGPGKEWEEYVQIRTLVEKI 65 Query: 61 RKKQKGLSVTFDGKREDYFPDLMKWASENGASVEGFEMVNFKEEGFGLRATRDIKAEELF 120 RKKQKGLSVTFDGKREDYFPDLMKWASENGASVEGFEMVNFKEEGFGLRATRDIKAEELF Sbjct: 66 RKKQKGLSVTFDGKREDYFPDLMKWASENGASVEGFEMVNFKEEGFGLRATRDIKAEELF 125 Query: 121 LWVPRKLLMTVESAKNSVLGPLYSQDRILQAMGNIALAFHLLCERASPNSFWQPYIQTLP 180 LWVPRKLLMTVESAKNSVLGPLYSQDRILQAMGNIALAFHLLCERASPNSFWQPYIQTLP Sbjct: 126 LWVPRKLLMTVESAKNSVLGPLYSQDRILQAMGNIALAFHLLCERASPNSFWQPYIQTLP 185 Query: 181 SEYDTPLYFEEDEVRYLQSTQAIHDVFSQYKNTARQYAYFYKVIQTHPHANKLPLKDSFT 240 SEYDTPLYFEEDEVRYLQSTQAIHDVFSQYKNTARQYAYFYKVIQTHPHANKLPLKDSFT Sbjct: 186 SEYDTPLYFEEDEVRYLQSTQAIHDVFSQYKNTARQYAYFYKVIQTHPHANKLPLKDSFT 245 Query: 241 YEDYRWAVSSVMTRQNQIPTEDGSRVTLALIPLWDMCNHTNGLITTGYNLEDDRCECVAL 300 YEDYRWAVSSVMTRQNQIPTEDGSRVTLALIPLWDMCNHTNGLITTGYNLEDDRCECVAL Sbjct: 246 YEDYRWAVSSVMTRQNQIPTEDGSRVTLALIPLWDMCNHTNGLITTGYNLEDDRCECVAL 305 Query: 301 QDFRAGEQIYIFYGTRSNAEFVIHSGFFFDNNSHDRVKIKLGVSKSDRLYAMKAEVLARA 360 QDFRAGEQIYIFYGTRSNAEFVIHSGFFFDNNSHDRVKIKLGVSKSDRLYAMKAEVLARA Sbjct: 306 QDFRAGEQIYIFYGTRSNAEFVIHSGFFFDNNSHDRVKIKLGVSKSDRLYAMKAEVLARA 365 Query: 361 GIPTSSVFALHFTEPPISAQLLAFLRVFCMTEEELKEHLLGDSAIDRIFTLGNSEFPVSW 420 GIPTSSVFALHFTEPPISAQLLAFLRVFCMTEEELKEHLLGDSAIDRIFTLGNSEFPVSW Sbjct: 366 GIPTSSVFALHFTEPPISAQLLAFLRVFCMTEEELKEHLLGDSAIDRIFTLGNSEFPVSW 425 Query: 421 DNEVKLWTFLEDRASLLLKTYKTTIEEDKSVLKNHDLSVRAKMAIKLRLGEKEILEKAVK 480 DNEVKLWTFLEDRASLLLKTYKTTIEEDKSVLKNHDLSVRAKMAIKLRLGEKEILEKAVK Sbjct: 426 DNEVKLWTFLEDRASLLLKTYKTTIEEDKSVLKNHDLSVRAKMAIKLRLGEKEILEKAVK 485 Query: 481 SAAVNREYYRQQMEEKAPLPKYEESNLGLLESSVGDSRLPLVLRNLEEEAGVQDALNIRE 540 SAAVNREYYRQQMEEKAPLPKYEESNLGLLESSVGDSRLPLVLRNLEEEAGVQDALNIRE Sbjct: 486 SAAVNREYYRQQMEEKAPLPKYEESNLGLLESSVGDSRLPLVLRNLEEEAGVQDALNIRE 545 Query: 541 AISKAKATENGLVNGENSIPNGTRSENESLNQESKRAVEDAKGSSSDSTAGVKE 594 AISKAKATENGLVNGENSIPNGTRSENESLNQESKRAVEDAKGSSSDSTAGVKE Sbjct: 546 AISKAKATENGLVNGENSIPNGTRSENESLNQESKRAVEDAKGSSSDSTAGVKE 599 >6ICT-A nrPDB Length = 504 Score = 849 bits (2192), Expect = 0.0, Method: Composition-based stats. Identities = 503/503 (100%), Positives = 503/503 (100%) Query: 1 MGKKSRVKTQKSGTGATATVSPKEILNLTSELLQKCSSPAPGPGKEWEEYVQIRTLVEKI 60 MGKKSRVKTQKSGTGATATVSPKEILNLTSELLQKCSSPAPGPGKEWEEYVQIRTLVEKI Sbjct: 2 MGKKSRVKTQKSGTGATATVSPKEILNLTSELLQKCSSPAPGPGKEWEEYVQIRTLVEKI 61 Query: 61 RKKQKGLSVTFDGKREDYFPDLMKWASENGASVEGFEMVNFKEEGFGLRATRDIKAEELF 120 RKKQKGLSVTFDGKREDYFPDLMKWASENGASVEGFEMVNFKEEGFGLRATRDIKAEELF Sbjct: 62 RKKQKGLSVTFDGKREDYFPDLMKWASENGASVEGFEMVNFKEEGFGLRATRDIKAEELF 121 Query: 121 LWVPRKLLMTVESAKNSVLGPLYSQDRILQAMGNIALAFHLLCERASPNSFWQPYIQTLP 180 LWVPRKLLMTVESAKNSVLGPLYSQDRILQAMGNIALAFHLLCERASPNSFWQPYIQTLP Sbjct: 122 LWVPRKLLMTVESAKNSVLGPLYSQDRILQAMGNIALAFHLLCERASPNSFWQPYIQTLP 181 Query: 181 SEYDTPLYFEEDEVRYLQSTQAIHDVFSQYKNTARQYAYFYKVIQTHPHANKLPLKDSFT 240 SEYDTPLYFEEDEVRYLQSTQAIHDVFSQYKNTARQYAYFYKVIQTHPHANKLPLKDSFT Sbjct: 182 SEYDTPLYFEEDEVRYLQSTQAIHDVFSQYKNTARQYAYFYKVIQTHPHANKLPLKDSFT 241 Query: 241 YEDYRWAVSSVMTRQNQIPTEDGSRVTLALIPLWDMCNHTNGLITTGYNLEDDRCECVAL 300 YEDYRWAVSSVMTRQNQIPTEDGSRVTLALIPLWDMCNHTNGLITTGYNLEDDRCECVAL Sbjct: 242 YEDYRWAVSSVMTRQNQIPTEDGSRVTLALIPLWDMCNHTNGLITTGYNLEDDRCECVAL 301 Query: 301 QDFRAGEQIYIFYGTRSNAEFVIHSGFFFDNNSHDRVKIKLGVSKSDRLYAMKAEVLARA 360 QDFRAGEQIYIFYGTRSNAEFVIHSGFFFDNNSHDRVKIKLGVSKSDRLYAMKAEVLARA Sbjct: 302 QDFRAGEQIYIFYGTRSNAEFVIHSGFFFDNNSHDRVKIKLGVSKSDRLYAMKAEVLARA 361 Query: 361 GIPTSSVFALHFTEPPISAQLLAFLRVFCMTEEELKEHLLGDSAIDRIFTLGNSEFPVSW 420 GIPTSSVFALHFTEPPISAQLLAFLRVFCMTEEELKEHLLGDSAIDRIFTLGNSEFPVSW Sbjct: 362 GIPTSSVFALHFTEPPISAQLLAFLRVFCMTEEELKEHLLGDSAIDRIFTLGNSEFPVSW 421 Query: 421 DNEVKLWTFLEDRASLLLKTYKTTIEEDKSVLKNHDLSVRAKMAIKLRLGEKEILEKAVK 480 DNEVKLWTFLEDRASLLLKTYKTTIEEDKSVLKNHDLSVRAKMAIKLRLGEKEILEKAVK Sbjct: 422 DNEVKLWTFLEDRASLLLKTYKTTIEEDKSVLKNHDLSVRAKMAIKLRLGEKEILEKAVK 481 Query: 481 SAAVNREYYRQQMEEKAPLPKYE 503 SAAVNREYYRQQMEEKAPLPKYE Sbjct: 482 SAAVNREYYRQQMEEKAPLPKYE 504 >1OZV-A nrPDB Length = 444 Score = 499 bits (1285), Expect = e-141, Method: Composition-based stats. Identities = 114/412 (27%), Positives = 193/412 (46%), Gaps = 40/412 (9%) Query: 84 KWASENGASVEGFEM-VNFKEEGFGLRATRDIKAEELFLWVPRKLLMTVESAKNSVLGPL 142 KW E G + + EG GL A +DI ++ L VP++L + ++ S +G + Sbjct: 15 KWLQEEGVITAKTPVKASVVTEGLGLVALKDISRNDVILQVPKRLWINPDAVAASEIGRV 74 Query: 143 YSQDRILQAMGNIALAFHLLCERASPNSFWQPYIQTLPSEYDTPLYFEEDEVRYLQSTQA 202 S+ + +++ L+ ER+ +S W+ Y LP E D+ +Y+ E+E++ LQ +Q Sbjct: 75 CSELKPW-----LSVILFLIRERSREDSVWKHYFGILPQETDSTIYWSEEELQELQGSQL 129 Query: 203 IHDVFSQYKNTARQYAYFYKVIQTHPHANKLPLKDSFTYEDYRWAVSSVMTRQN-QIPTE 261 + S + + K+ Q NK D T +D+ WA + +R ++ E Sbjct: 130 LKTTVSVKEYVKNE---CLKLEQEIILPNKRLFPDPVTLDDFFWAFGILRSRAFSRLRNE 186 Query: 262 DGSRVTLALIPLWDMCNHTNGLITTGYNLEDDRCECVALQDF----------RAGEQIYI 311 + L ++P+ D+ NH+ G+ T + E + D+ +AGEQ+YI Sbjct: 187 N-----LVVVPMADLINHSAGVTTEDHAYEVKGAAGLFSWDYLFSLKSPLSVKAGEQVYI 241 Query: 312 FYG-TRSNAEFVIHSGFFFDNNSHDRVKIKLGVSKSDRLYAMKAEVLARAGIPTSSVFAL 370 Y +SNAE + GF N + + L +S+SD + K +V G ++ F + Sbjct: 242 QYDLNKSNAELALDYGFIEPNENRHAYTLTLEISESDPFFDDKLDVAESNGFAQTAYFDI 301 Query: 371 HF--TEPPISAQLLAFLRVFCM--TEEELKEHLLGDSAIDRIFTLGNSEFPVSWDNEVKL 426 + T PP LL +LR+ + T+ L E L D+ G+ E VS DNE L Sbjct: 302 FYNRTLPP---GLLPYLRLVALGGTDAFLLESLFRDT------IWGHLELSVSRDNEELL 352 Query: 427 WTFLEDRASLLLKTYKTTIEEDKSVLKNHDLSVRAKMAIKLRLGEKEILEKA 478 + + L Y TTIE+D+ LK +L R +A+ +R GEK +L++ Sbjct: 353 CKAVREACKSALAGYHTTIEQDRE-LKEGNLDSRLAIAVGIREGEKMVLQQI 403 >3QXY-A nrPDB Length = 449 Score = 414 bits (1063), Expect = e-116, Method: Composition-based stats. Identities = 114/449 (25%), Positives = 183/449 (40%), Gaps = 57/449 (12%) Query: 72 DGKREDYFPDLMKWASENGASVEGFEMVNFKEEG----FGLRATRDIKAEELFLWVPRKL 127 DG D + W G +E V +G +G+ A ++A EL VPR Sbjct: 15 DGGDLDPVACFLSWCRRVG--LELSPKVAVSRQGTVAGYGMVARESVQAGELLFVVPRAA 72 Query: 128 LMTVESAKNSVLGPLYSQDRI-LQAM-GNIALAFHLLCERASPNSFWQPYIQTLP--SEY 183 L+ S +G L ++R+ LQ+ G + L LL E +P S W+PY P Sbjct: 73 LL---SQHTCSIGGLLERERVALQSQSGWVPLLLALLHELQAPASRWRPYFALWPELGRL 129 Query: 184 DTPLYFEEDEVR-YLQSTQAIHDVFSQYKNTARQY-AYFYKVIQTHPHANKLPLKDSFTY 241 + P+++ E+E R LQ T V N +Y + ++ HP L ++ + Sbjct: 130 EHPMFWPEEERRCLLQGTGVPEAVEKDLANIRSEYQSIVLPFMEAHPDLFSLRVR---SL 186 Query: 242 EDYRWAVSSVMTRQNQIPTEDGSRV----TLALIPLWDMCNHTNGLITTGYNLE-DDRC- 295 E Y V+ VM Q P E+ + ++P D+ NH L NLE C Sbjct: 187 ELYHQLVALVMAYSFQEPLEEEEDEKEPNSPVMVPAADILNH---LANHNANLEYSANCL 243 Query: 296 ECVALQDFRAGEQIYIFYGTRSNAEFVIHSGFF--FDNNSHDRVKIKLGVSKSDRLYAMK 353 VA Q G +I+ YG +N + + GF + +N+ D I++ + L K Sbjct: 244 RMVATQPIPKGHEIFNTYGQMANWQLIHMYGFVEPYPDNTDDTADIQMVTVREAALQGTK 303 Query: 354 AE------------VLARAGIPTSSVFALHFTEPPISAQLLAFLRVFCMTEEELKEHLLG 401 E + + F + E +L L+V CM EE +E Sbjct: 304 TEAERHLVYERWDFLCKLEMVGEEGAFVIGREEVLTEEELTTTLKVLCMPAEEFRELKDQ 363 Query: 402 DSAIDR-----IFTLGN-SEFPVSWDNEVKLWTFLEDRASLLLKTYKTTIEEDKSVLKNH 455 D D T+ N + SW L++ L L+TY T ++ D+ +L N Sbjct: 364 DGGGDDKREEGSLTITNIPKLKASWRQ------LLQNSVLLTLQTYATDLKTDQGLLSNK 417 Query: 456 D----LSVRAKMAIKLRLGEKEILEKAVK 480 + LS R + A+++R G+K IL + ++ Sbjct: 418 EVYAKLSWREQQALQVRYGQKMILHQLLE 446 >1X3S-A nrPDB Length = 195 Score = 33.6 bits (75), Expect = 0.24, Method: Composition-based stats. Identities = 19/119 (15%), Positives = 49/119 (41%) Query: 52 QIRTLVEKIRKKQKGLSVTFDGKREDYFPDLMKWASENGASVEGFEMVNFKEEGFGLRAT 111 + RTL + +G+ + +D R D F L W +E ++VN + Sbjct: 76 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDKEN 135 Query: 112 RDIKAEELFLWVPRKLLMTVESAKNSVLGPLYSQDRILQAMGNIALAFHLLCERASPNS 170 R++ E + + ++ +E++ + G + + +++ + + + + P+S Sbjct: 136 REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESENQNSGPSS 194 >1CJS-A nrPDB Length = 219 Score = 32.1 bits (71), Expect = 0.75, Method: Composition-based stats. Identities = 35/170 (20%), Positives = 59/170 (34%), Gaps = 21/170 (12%) Query: 48 EEYVQIRTLVEKIRKKQKGLSVTFDGKREDYFPDLMKWASENGASVEGFEMVNFKEEGFG 107 E ++ ++ R K+ ++V G DL K A E G +V E +E G Sbjct: 41 ENRIKTEVVLPHGRGKEAKIAVIGTG-------DLAKQAEELGLTVIRKE--EIEELGKN 91 Query: 108 LRATRDIKAEELFLWVPRKLLMTVESAKNSVLGPLYSQDRILQAMGNIALAFHLLCERAS 167 R R I F L+ + +LGP + + A NI L + Sbjct: 92 KRKLRKIAKAHDFFIAQADLMPLIGRYMGVILGPRGKMPKPVPANANIKPLVERLKKTVV 151 Query: 168 PNSFWQPYIQTLPSEYDTPLYFEEDEVRYLQSTQAIHDVFSQYKNTARQY 217 N+ +PY Q L + Q + ++ + A++Y Sbjct: 152 INTRDKPYFQVLVGN------------EKMTDEQIVDNIEAVLNVVAKKY 189 >3BH4-A nrPDB Length = 483 Score = 30.5 bits (67), Expect = 1.9, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 28/66 (42%), Gaps = 5/66 (7%) Query: 44 GKEWEEYVQIRTLVEKIRKKQKGLSVTFDGKREDYF--PDLMKWASENGASVEGFEMVNF 101 G +E ++ +E I K +K + G + DY PD++ W E +S + Sbjct: 371 GTSPKEIPSLKDNIEPILKARKEYAY---GPQHDYIDHPDVIGWTREGDSSAAKSGLAAL 427 Query: 102 KEEGFG 107 +G G Sbjct: 428 ITDGPG 433 >2AH6-A nrPDB Length = 208 Score = 30.5 bits (67), Expect = 2.1, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 29/80 (36%) Query: 190 EEDEVRYLQSTQAIHDVFSQYKNTARQYAYFYKVIQTHPHANKLPLKDSFTYEDYRWAVS 249 E E L + AR+ + +Q N + LK DY +AV+ Sbjct: 118 PELERFILPGGSEAAASLHVCRTIARRAERYVVRLQQEGEINPIVLKYLNRLSDYFFAVA 177 Query: 250 SVMTRQNQIPTEDGSRVTLA 269 V+ + Q+P + R + Sbjct: 178 RVVNSRLQVPDVEYERSAIV 197 >2DU7-A nrPDB Length = 549 Score = 30.1 bits (66), Expect = 2.6, Method: Composition-based stats. Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%) Query: 66 GLSVTFDGKREDYFPDLMKWASENGASV 93 G+ TF+G +E Y P ++K A E G S Sbjct: 449 GIPPTFEGVKEQYIP-ILKKAKEEGVST 475 >5HTF-A nrPDB Length = 283 Score = 29.4 bits (64), Expect = 4.9, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 42/109 (38%), Gaps = 7/109 (6%) Query: 440 TYKTTIEEDKSVLKNHDLSVRAKMAIKLRLGEKEILEKAVKSAAVNREYYRQQMEEKAPL 499 I+ D + +L A+K G E++++ + +Y + E A Sbjct: 4 GSSAVIKTDAGSVTQDEL----YEAMKTTYGN-EVVQQLTFKKILEDKYTVTEKEVNAEY 58 Query: 500 PKYEESNLGLLESSVGDSRLPLV--LRNLEEEAGVQDALNIREAISKAK 546 KYEE ES++ + L NLE VQ A +S++K Sbjct: 59 KKYEEQYGDSFESTLSSNNLTKTSFKENLEYNLLVQKATEANMDVSESK 107 >5FHY-A nrPDB Length = 346 Score = 29.4 bits (64), Expect = 5.1, Method: Composition-based stats. Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 2/40 (5%) Query: 500 PKYEESNLGLLESSVGDSRLPLVLRNLEEE--AGVQDALN 537 P + N G L SVGD++LP + + AG++DA+N Sbjct: 57 PANAKFNSGTLNISVGDTKLPAITVDSSNNTLAGMRDAIN 96 >1MMF-A nrPDB Length = 555 Score = 28.6 bits (62), Expect = 7.0, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 2/61 (3%) Query: 62 KKQKGLSVTFDGKREDYFPDLMKWASENGASVEGFEMVNFKE--EGFGLRATRDIKAEEL 119 K GL V DGKR D F + ++ ++ +VE E E E + + EE+ Sbjct: 43 KVDNGLIVELDGKRRDQFDMIDRFIADYAINVERTEQAMRLEAVEIARMLVDIHVSREEI 102 Query: 120 F 120 Sbjct: 103 I 103 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.308 0.124 0.316 Lambda K H 0.267 0.0385 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 20,266,683 Number of Sequences: 36641 Number of extensions: 764932 Number of successful extensions: 2253 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 16 Number of HSP's that attempted gapping in prelim test: 2216 Number of HSP's gapped (non-prelim): 27 length of query: 594 length of database: 10,336,785 effective HSP length: 103 effective length of query: 491 effective length of database: 6,562,762 effective search space: 3222316142 effective search space used: 3222316142 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 62 (28.6 bits)