BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q80UW2 (297 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 2E32-A nrPDB 596 e-171 3WSO-A nrPDB 250 5e-67 4UIJ-A nrPDB 29 2.6 2CPQ-A nrPDB 28 4.0 3QLB-A nrPDB 28 5.6 5VZU-B nrPDB 27 7.8 2XDQ-A nrPDB 27 9.1 >2E32-A nrPDB Length = 297 Score = 596 bits (1537), Expect = e-171, Method: Compositional matrix adjust. Identities = 296/297 (99%), Positives = 297/297 (100%) Query: 1 MDGDGDPESVSHPEEASPEEQPEEAGAEASAEEEQLREAEEEEEAEAVEYLAELPEPLLL 60 MDGDGDPESVSHPEEASPEEQPEEAGAEASAEEEQLREAEEEEEAEAVEYLAELPEPLLL Sbjct: 1 MDGDGDPESVSHPEEASPEEQPEEAGAEASAEEEQLREAEEEEEAEAVEYLAELPEPLLL 60 Query: 61 RVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQEGLVPEGSADEERDHWQQFYFL 120 RVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQEGLVPEGSADEERDHWQQFYFL Sbjct: 61 RVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQEGLVPEGSADEERDHWQQFYFL 120 Query: 121 SKRRRNLLRNPCGEEDLEGWSDVEHGGDGWRVEELPGDNGVEFTQDDSVKKYFASSFEWC 180 SKRRRNLLRNPCGEEDLEGWSDVEHGGDGW+VEELPGDNGVEFTQDDSVKKYFASSFEWC Sbjct: 121 SKRRRNLLRNPCGEEDLEGWSDVEHGGDGWKVEELPGDNGVEFTQDDSVKKYFASSFEWC 180 Query: 181 RKAQVIDLQAEGYWEELLDTTQPAIVVKDWYSGRTDAGSLYELTVRLLSENEDVLAEFAT 240 RKAQVIDLQAEGYWEELLDTTQPAIVVKDWYSGRTDAGSLYELTVRLLSENEDVLAEFAT Sbjct: 181 RKAQVIDLQAEGYWEELLDTTQPAIVVKDWYSGRTDAGSLYELTVRLLSENEDVLAEFAT 240 Query: 241 GQVAVPEDGSWMEISHTFIDYGPGVRFVRFEHGGQDSVYWKGWFGARVTNSSVWVEP 297 GQVAVPEDGSWMEISHTFIDYGPGVRFVRFEHGGQDSVYWKGWFGARVTNSSVWVEP Sbjct: 241 GQVAVPEDGSWMEISHTFIDYGPGVRFVRFEHGGQDSVYWKGWFGARVTNSSVWVEP 297 >3WSO-A nrPDB Length = 255 Score = 250 bits (639), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 125/253 (49%), Positives = 164/253 (64%), Gaps = 4/253 (1%) Query: 47 AVEYLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQEGLVPEGS 106 AV + ELPE +LL + +PA +L+ CRLVC W++L+D LW KC +EG + E Sbjct: 2 AVGNINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLVTLWKRKCLREGFITE-D 60 Query: 107 ADEERDHWQQFYFLSKRRRNLLRNPCGEEDLEGWSDVEHGGDGWRVEELPGDNGVEFTQD 166 D+ W+ FYFL RNLL NPC EE E WS +GGD W+VE+L D EF + Sbjct: 61 WDQPVADWKIFYFLRSLHRNLLHNPCAEEGFEFWSLDVNGGDEWKVEDLSRDQRKEFP-N 119 Query: 167 DSVKKYFASSFEWCRKAQVIDLQAEGYWEELLDTTQPAIVVKDWYSGRTDAGSLYELTVR 226 D VKKYF +S+ C K+QV+DL+AEGYWEEL+DTT+P I VKDW++ R D GS Y+L V+ Sbjct: 120 DQVKKYFVTSYYTCLKSQVVDLKAEGYWEELMDTTRPDIEVKDWFAARPDCGSKYQLCVQ 179 Query: 227 LLSENEDVLAEFATGQVAVPE--DGSWMEISHTFIDYGPGVRFVRFEHGGQDSVYWKGWF 284 LLS L F + + D W E+SHTF +Y PGVR++ F+HGG D+ YW GW+ Sbjct: 180 LLSSAHAPLGTFQPDPATIQQKSDAKWREVSHTFSNYPPGVRYIWFQHGGVDTHYWAGWY 239 Query: 285 GARVTNSSVWVEP 297 G RVTNSS+ + P Sbjct: 240 GPRVTNSSITIRP 252 >4UIJ-A nrPDB Length = 141 Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust. Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 217 AGSLYELTVRLLSENEDVLAEFATGQVAVPED-GSWMEISHTFIDYGPGVRFVR 269 GSL+ T+R L+ + +L +G+V V D G W+ I + +G + ++R Sbjct: 45 GGSLHYTTLRTLTGQDTMLKAMFSGRVEVLTDAGGWVLIDRSGRHFGTILNYLR 98 >2CPQ-A nrPDB Length = 91 Score = 28.5 bits (62), Expect = 4.0, Method: Compositional matrix adjust. Identities = 13/50 (26%), Positives = 25/50 (50%) Query: 135 EDLEGWSDVEHGGDGWRVEELPGDNGVEFTQDDSVKKYFASSFEWCRKAQ 184 EDL G + HG + + ++PG +E +D + + S + +KA+ Sbjct: 23 EDLMGLAIGTHGSNIQQARKVPGVTAIELDEDTGTFRIYGESADAVKKAR 72 >3QLB-A nrPDB Length = 748 Score = 27.7 bits (60), Expect = 5.6, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 133 GEEDLEGWSDVEHGGDGWRVEELPGDNGVEFTQDDSVKKYFASSFEW 179 G+ D G D E G +R+ L D+G +F K+YFA SF W Sbjct: 227 GQFDFSGPLDDE-GQFLYRLVGLERDSGTQFDHIKDDKQYFAPSFTW 272 >5VZU-B nrPDB Length = 488 Score = 27.3 bits (59), Expect = 7.8, Method: Compositional matrix adjust. Identities = 10/38 (26%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Query: 62 VLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQE 99 + A LP T+L + VC +++ ++ +W +C++E Sbjct: 27 IFASLPGTDLPSLAQ-VCTKFRRILHTDTIWRRRCREE 63 >2XDQ-A nrPDB Length = 460 Score = 27.3 bits (59), Expect = 9.1, Method: Compositional matrix adjust. Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 3/53 (5%) Query: 68 ATELVQ--ACRLVCLRWKELVDGAPLWLLK-CQQEGLVPEGSADEERDHWQQF 117 AT L++ C+L+ + DG W+ + C G+ P+G A+ E + WQ+ Sbjct: 256 ATTLIRRRKCQLITAPFPIGPDGTRTWIEQICATFGIQPQGLAEREAETWQKL 308 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 2E32-A nrPDB 535 e-153 3WSO-A nrPDB 452 e-128 Sequences not found previously or not previously below threshold: 6FZV-D nrPDB 33 0.15 4R6L-A nrPDB 33 0.20 5VZU-B nrPDB 32 0.31 3QLB-A nrPDB 32 0.33 5K9H-A nrPDB 32 0.38 5CCB-B nrPDB 32 0.42 1AUA-A nrPDB 32 0.48 6FEC-u nrPDB 31 0.50 6GAZ-Ae nrPDB 31 0.55 1PZN-A nrPDB 30 0.94 4DHK-A nrPDB 30 1.2 4TN3-A nrPDB 29 2.7 3A6M-A nrPDB 29 2.9 2IYA-A nrPDB 29 2.9 3H7K-A nrPDB 29 3.7 5W9A-A nrPDB 28 6.7 2PX9-A nrPDB 27 8.8 CONVERGED! >2E32-A nrPDB Length = 297 Score = 535 bits (1378), Expect = e-153, Method: Composition-based stats. Identities = 296/297 (99%), Positives = 297/297 (100%) Query: 1 MDGDGDPESVSHPEEASPEEQPEEAGAEASAEEEQLREAEEEEEAEAVEYLAELPEPLLL 60 MDGDGDPESVSHPEEASPEEQPEEAGAEASAEEEQLREAEEEEEAEAVEYLAELPEPLLL Sbjct: 1 MDGDGDPESVSHPEEASPEEQPEEAGAEASAEEEQLREAEEEEEAEAVEYLAELPEPLLL 60 Query: 61 RVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQEGLVPEGSADEERDHWQQFYFL 120 RVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQEGLVPEGSADEERDHWQQFYFL Sbjct: 61 RVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQEGLVPEGSADEERDHWQQFYFL 120 Query: 121 SKRRRNLLRNPCGEEDLEGWSDVEHGGDGWRVEELPGDNGVEFTQDDSVKKYFASSFEWC 180 SKRRRNLLRNPCGEEDLEGWSDVEHGGDGW+VEELPGDNGVEFTQDDSVKKYFASSFEWC Sbjct: 121 SKRRRNLLRNPCGEEDLEGWSDVEHGGDGWKVEELPGDNGVEFTQDDSVKKYFASSFEWC 180 Query: 181 RKAQVIDLQAEGYWEELLDTTQPAIVVKDWYSGRTDAGSLYELTVRLLSENEDVLAEFAT 240 RKAQVIDLQAEGYWEELLDTTQPAIVVKDWYSGRTDAGSLYELTVRLLSENEDVLAEFAT Sbjct: 181 RKAQVIDLQAEGYWEELLDTTQPAIVVKDWYSGRTDAGSLYELTVRLLSENEDVLAEFAT 240 Query: 241 GQVAVPEDGSWMEISHTFIDYGPGVRFVRFEHGGQDSVYWKGWFGARVTNSSVWVEP 297 GQVAVPEDGSWMEISHTFIDYGPGVRFVRFEHGGQDSVYWKGWFGARVTNSSVWVEP Sbjct: 241 GQVAVPEDGSWMEISHTFIDYGPGVRFVRFEHGGQDSVYWKGWFGARVTNSSVWVEP 297 >3WSO-A nrPDB Length = 255 Score = 452 bits (1164), Expect = e-128, Method: Composition-based stats. Identities = 125/253 (49%), Positives = 164/253 (64%), Gaps = 4/253 (1%) Query: 47 AVEYLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQEGLVPEGS 106 AV + ELPE +LL + +PA +L+ CRLVC W++L+D LW KC +EG + E Sbjct: 2 AVGNINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLVTLWKRKCLREGFITE-D 60 Query: 107 ADEERDHWQQFYFLSKRRRNLLRNPCGEEDLEGWSDVEHGGDGWRVEELPGDNGVEFTQD 166 D+ W+ FYFL RNLL NPC EE E WS +GGD W+VE+L D EF + Sbjct: 61 WDQPVADWKIFYFLRSLHRNLLHNPCAEEGFEFWSLDVNGGDEWKVEDLSRDQRKEFP-N 119 Query: 167 DSVKKYFASSFEWCRKAQVIDLQAEGYWEELLDTTQPAIVVKDWYSGRTDAGSLYELTVR 226 D VKKYF +S+ C K+QV+DL+AEGYWEEL+DTT+P I VKDW++ R D GS Y+L V+ Sbjct: 120 DQVKKYFVTSYYTCLKSQVVDLKAEGYWEELMDTTRPDIEVKDWFAARPDCGSKYQLCVQ 179 Query: 227 LLSENEDVLAEFATGQVAVPE--DGSWMEISHTFIDYGPGVRFVRFEHGGQDSVYWKGWF 284 LLS L F + + D W E+SHTF +Y PGVR++ F+HGG D+ YW GW+ Sbjct: 180 LLSSAHAPLGTFQPDPATIQQKSDAKWREVSHTFSNYPPGVRYIWFQHGGVDTHYWAGWY 239 Query: 285 GARVTNSSVWVEP 297 G RVTNSS+ + P Sbjct: 240 GPRVTNSSITIRP 252 >6FZV-D nrPDB Length = 265 Score = 33.1 bits (74), Expect = 0.15, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 22/60 (36%), Gaps = 16/60 (26%) Query: 210 WYSGRTDAGSLYELTVRLLSENEDVLAEFATGQVAVPEDGSWMEISHTFIDYGPGVRFVR 269 WYSGR +G+ ++ L + + L +W E DY PG+ Sbjct: 124 WYSGRATSGTEHQFCGGRLEKAQGTLTT-----------PNWPE-----SDYPPGISCSW 167 >4R6L-A nrPDB Length = 519 Score = 32.7 bits (73), Expect = 0.20, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 7/67 (10%) Query: 238 FATGQVA--VPEDGSWMEISH-----TFIDYGPGVRFVRFEHGGQDSVYWKGWFGARVTN 290 F T +++ +PE G++ E++ P + F +VYW G VT Sbjct: 399 FQTDRLSTIIPEAGAFAEVASGVLAVPLSRTPPRRVMLWFRPEVAQTVYWAGNPDKSVTA 458 Query: 291 SSVWVEP 297 S + P Sbjct: 459 ESGRLRP 465 >5VZU-B nrPDB Length = 488 Score = 32.0 bits (71), Expect = 0.31, Method: Composition-based stats. Identities = 11/41 (26%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Query: 59 LLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQE 99 L+ + A LP T+L + VC +++ ++ +W +C++E Sbjct: 24 LVEIFASLPGTDLPSLAQ-VCTKFRRILHTDTIWRRRCREE 63 >3QLB-A nrPDB Length = 748 Score = 32.0 bits (71), Expect = 0.33, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 133 GEEDLEGWSDVEHGGDGWRVEELPGDNGVEFTQDDSVKKYFASSFEW 179 G+ D G D E G +R+ L D+G +F K+YFA SF W Sbjct: 227 GQFDFSGPLDDE-GQFLYRLVGLERDSGTQFDHIKDDKQYFAPSFTW 272 >5K9H-A nrPDB Length = 591 Score = 31.6 bits (70), Expect = 0.38, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 30/74 (40%), Gaps = 15/74 (20%) Query: 83 KELVDGAPLWLLKCQQEGL---VPEGSADEERDHWQQ---FYFLSKRRRNLLRNPCGEED 136 +EL D C++EGL V D + Q + + R LL N E Sbjct: 135 RELADA-------CREEGLKFAVYLSPWDRNHPAYGQPAYVAYFRNQLRELLTN--YGEI 185 Query: 137 LEGWSDVEHGGDGW 150 E W D +GGDGW Sbjct: 186 FEVWFDGANGGDGW 199 >5CCB-B nrPDB Length = 497 Score = 31.6 bits (70), Expect = 0.42, Method: Composition-based stats. Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 25/94 (26%) Query: 7 PESVSHPEEAS--------PEEQ-PEEAGAEASAEEEQLREAEEEEEA--EAVEYLAEL- 54 PES +HPE+ PE + P+E G++ +E+ R EE+ + EA L+E Sbjct: 310 PES-NHPEDQETMETISQDPEHKGPKERGSKKDYIQEKQRRQEEQRKRHLEAAALLSERN 368 Query: 55 -----------PEPLLLRVLAEL-PATELVQACR 76 P PLLL +L + P+ V C+ Sbjct: 369 ADGLIVASRFHPTPLLLSLLDFVAPSRPFVVYCQ 402 >1AUA-A nrPDB Length = 296 Score = 31.6 bits (70), Expect = 0.48, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 11/79 (13%) Query: 11 SHPEEASPEEQPEEAGAEASAEEEQLREAEEEEEAEAVEYLAELPEPLLLRVLAELP--- 67 S+P+ P+ P G SA+E+ L AE + E ++ L + LLR L Sbjct: 9 SYPQNCPPDALPGTPGNLDSAQEKAL--AELRKLLEDAGFIERLDDSTLLRFLRARKFDV 66 Query: 68 --ATELVQACRLVCLRWKE 84 A E+ + C +W++ Sbjct: 67 QLAKEMFENCE----KWRK 81 >6FEC-u nrPDB Length = 636 Score = 31.2 bits (69), Expect = 0.50, Method: Composition-based stats. Identities = 17/45 (37%), Positives = 21/45 (46%) Query: 2 DGDGDPESVSHPEEASPEEQPEEAGAEASAEEEQLREAEEEEEAE 46 DG D +S S PE PEE P + AS + E+E E E Sbjct: 588 DGKKDQDSRSAPEPKKPEENPASKFSSASKYAALSVDGEDENEGE 632 >6GAZ-Ae nrPDB Length = 390 Score = 31.2 bits (69), Expect = 0.55, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 3/46 (6%) Query: 8 ESVSHPEEASPEEQPEEAGAEASAEE--EQLREAEEEEEAEAVEYL 51 ++V+ P + + EEQP+E +EE EQL + EE E+++ +YL Sbjct: 263 KAVTAPAQGTSEEQPQEGEESQRSEELVEQL-DVEETEQSKLPQYL 307 >1PZN-A nrPDB Length = 349 Score = 30.4 bits (67), Expect = 0.94, Method: Composition-based stats. Identities = 57/253 (22%), Positives = 95/253 (37%), Gaps = 41/253 (16%) Query: 31 AEEEQLREAEEEE-EAEAVEYLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGA 89 A E+LREA + EA AV EL E + ++E A +++QA R + A Sbjct: 46 ATAEKLREAGYDTLEAIAVASPIELKE---VAGISEGTALKIIQAARKAANLGTFM--RA 100 Query: 90 PLWLLKCQQEGLVPEGSAD---------EERDHWQQFYFLSKRRRNLLRN-------PCG 133 +L K G + GS E + + F + L P Sbjct: 101 DEYLKKRATIGRISTGSKSLDKLLGGGIETQAITEVFGEFGSGKTQLAHTLAVMVQLPPE 160 Query: 134 EEDLEG---WSDVEHGGDGWRVEELPGDNGVEFTQDDSVKKYFASSFEWCRKAQVIDLQA 190 E L G W D E+ R+ E+ + G++ D+ +K + + ++ QA Sbjct: 161 EGGLNGSVIWIDTENTFRPERIREIAQNRGLD--PDEVLKHIYVARAFNSNHQMLLVQQA 218 Query: 191 EGYWEELLDTTQPAIVV---------KDWYSGRTDAGSLYELTVRLLSENEDV-----LA 236 E +ELL+T +P ++ + Y GR + + L++ + +A Sbjct: 219 EDKIKELLNTDRPVKLLIVDSLTSHFRSEYIGRGALAERQQKLAKHLADLHRLANLYDIA 278 Query: 237 EFATGQVAVPEDG 249 F T QV D Sbjct: 279 VFVTNQVQARPDA 291 >4DHK-A nrPDB Length = 191 Score = 30.0 bits (66), Expect = 1.2, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 1/42 (2%) Query: 225 VRLLSENEDVLAEFATGQVAVPEDGSWMEISHTFIDYGPGVR 266 +R ++E ++ F QV EDG +S+ YG +R Sbjct: 11 IRRMAEEHKMIEPFVPDQVRAAEDGR-RIVSYGTSSYGYDIR 51 >4TN3-A nrPDB Length = 400 Score = 28.9 bits (63), Expect = 2.7, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 2/72 (2%) Query: 14 EEASPEEQPEEAGAEASAEEEQLREAEEEEEAEAVEYLAELPEPLLLRVLAELPATELVQ 73 E+AS + Q + SA+ EQLRE + EE+ ++ L + E +L + TE+VQ Sbjct: 101 EKASWKIQIDYDKTNVSADFEQLREILDWEESNELQNLEKEEEDILKSLTKS--ETEMVQ 158 Query: 74 ACRLVCLRWKEL 85 + + EL Sbjct: 159 QTQYMRELISEL 170 >3A6M-A nrPDB Length = 177 Score = 28.9 bits (63), Expect = 2.9, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Query: 15 EASPEEQPEEAGAEASAEEEQLREAEEEEEAEAVEYLAELP--EPLLLRVLAELPATE 70 E + E+ E G EA A EE+L+ AEEE + +YL L + R+ EL A E Sbjct: 7 ENTLEKDLEAVGQEAQALEERLKAAEEELKGLKDKYLRLLADFDNYRKRMEEELKARE 64 >2IYA-A nrPDB Length = 424 Score = 28.9 bits (63), Expect = 2.9, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 5/65 (7%) Query: 11 SHPEEASPEEQPEEAGA---EASAEEEQLREAEEEEEAEAVEY-LAELPEPLLLRVLAEL 66 S+PEE+ PE+Q G EA QL +A ++ + + Y +A P P+L R ++ Sbjct: 73 SNPEESWPEDQESAMGLFLDEAVRVLPQLEDAYADDRPDLIVYDIASWPAPVLGRKW-DI 131 Query: 67 PATEL 71 P +L Sbjct: 132 PFVQL 136 >3H7K-A nrPDB Length = 383 Score = 28.5 bits (62), Expect = 3.7, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 3/65 (4%) Query: 166 DDSVKKYF-ASSFEWCRKAQVIDLQAEGYWEELLDTTQPAIVVKDWYSGRTDAGSLYELT 224 ++ +KKY SF W + D G+ + + +P +V+ W TD YE + Sbjct: 196 EEELKKYLGVQSFIWLPRGLYGDEDTNGHIDNMCCFARPGVVLLSWTDDETD--PQYERS 253 Query: 225 VRLLS 229 V LS Sbjct: 254 VEALS 258 >5W9A-A nrPDB Length = 193 Score = 27.7 bits (60), Expect = 6.7, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 2/72 (2%) Query: 14 EEASPEEQPEEAGAEASAEEEQLREAEEEEEAEAVEYLAELPEPLLLRVLAELPATELVQ 73 E+AS + Q + SA+ EQLRE + EE+ ++ L + E +L + TE+VQ Sbjct: 74 EKASWKIQIDYDKTNVSADFEQLREILDWEESNELQNLEKEEEDILKSLTKS--ETEMVQ 131 Query: 74 ACRLVCLRWKEL 85 + + EL Sbjct: 132 QTQYMRELISEL 143 >2PX9-A nrPDB Length = 217 Score = 27.3 bits (59), Expect = 8.8, Method: Composition-based stats. Identities = 31/148 (20%), Positives = 55/148 (37%), Gaps = 22/148 (14%) Query: 3 GDGDPESVSHPEEASPEEQPE----EAGAEASAEEEQLREAEEEEEAEAVEYLAELPEPL 58 G+ D + P+ A PE E EA A AS E+ ++ +E A++ Y P L Sbjct: 33 GEEDADQEVSPDRADPEAAWEPTEAEARARASNEDGDIKRISTKEWAKSTGYD---PVKL 89 Query: 59 LLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQEGLVPEGS----------AD 108 ++ + L+ +L W++ PL + Q +G S D Sbjct: 90 FTKLFKD-DIRYLLTMDKL----WRKRKPPVPLDWAEVQSQGEETNASDQQNEPQLGLKD 144 Query: 109 EERDHWQQFYFLSKRRRNLLRNPCGEED 136 ++ + + L + LR E+ Sbjct: 145 QQVLDVKSYARLFSKSIETLRVHLAEKG 172 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.305 0.133 0.419 Lambda K H 0.267 0.0413 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 13,738,422 Number of Sequences: 36641 Number of extensions: 593572 Number of successful extensions: 1832 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 39 Number of HSP's successfully gapped in prelim test: 41 Number of HSP's that attempted gapping in prelim test: 1646 Number of HSP's gapped (non-prelim): 170 length of query: 297 length of database: 10,336,785 effective HSP length: 96 effective length of query: 201 effective length of database: 6,819,249 effective search space: 1370669049 effective search space used: 1370669049 T: 11 A: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.4 bits) S2: 59 (27.3 bits)