BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q7L266 (308 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 4O0G-A nrPDB 624 e-179 4O47-A nrPDB 485 e-137 2ZAK-A nrPDB 166 2e-41 3LJQ-A nrPDB 149 2e-36 2A8L-A nrPDB 142 1e-34 2E0Y-A nrPDB 29 2.1 2E0W-A nrPDB 29 2.4 2YO3-A nrPDB 29 3.3 4E0T-A nrPDB 28 3.4 2YVV-A nrPDB 27 7.6 >4O0G-A nrPDB Length = 309 Score = 624 bits (1610), Expect = e-179, Method: Compositional matrix adjust. Identities = 307/308 (99%), Positives = 307/308 (99%) Query: 1 MNPIVVVHGGGAGPISKDRKERVHQGMVRAATVGYGILREGGSAVDAVEGAVVALEDDPE 60 MNPIVVVHGGGAGPISKDRKERVHQGMVRAATVGYGILREGGSAVDAVEGAVVALEDDPE Sbjct: 2 MNPIVVVHGGGAGPISKDRKERVHQGMVRAATVGYGILREGGSAVDAVEGAVVALEDDPE 61 Query: 61 FNAGCGSVLNTNGEVEMDASIMDGKDLSAGAVSAVQCIANPIKLARLVMEKTPHCFLTDQ 120 FNAGCGSVLNTNGEVEMDASIMDGKDLSAGAVSAVQCIANPIKLARLVMEKTPHCFLTDQ Sbjct: 62 FNAGCGSVLNTNGEVEMDASIMDGKDLSAGAVSAVQCIANPIKLARLVMEKTPHCFLTDQ 121 Query: 121 GAAQFAAAMGVPEIPGEKLVTERNKKRLEKEKHEKGAQKTDCQKNLGTVGAVALDCKGNV 180 GAAQFAAAMGVPEIPGEKLVTERNKKRLEKEKHEKGAQKTDCQKNLGTVGAVALDCKGNV Sbjct: 122 GAAQFAAAMGVPEIPGEKLVTERNKKRLEKEKHEKGAQKTDCQKNLGTVGAVALDCKGNV 181 Query: 181 AYATSTGGIVNKMVGRVGDSPCLGAGGYADNDIGAVSTTGHGESILKVNLARLTLFHIEQ 240 AYATSTGGIVNKMVGRVGDSPCLGAGGYADNDIGAVST GHGESILKVNLARLTLFHIEQ Sbjct: 182 AYATSTGGIVNKMVGRVGDSPCLGAGGYADNDIGAVSTVGHGESILKVNLARLTLFHIEQ 241 Query: 241 GKTVEEAADLSLGYMKSRVKGLGGLIVVSKTGDWVAKWTSTSMPWAAAKDGKLHFGIDPD 300 GKTVEEAADLSLGYMKSRVKGLGGLIVVSKTGDWVAKWTSTSMPWAAAKDGKLHFGIDPD Sbjct: 242 GKTVEEAADLSLGYMKSRVKGLGGLIVVSKTGDWVAKWTSTSMPWAAAKDGKLHFGIDPD 301 Query: 301 DTTITDLP 308 DTTITDLP Sbjct: 302 DTTITDLP 309 >4O47-A nrPDB Length = 332 Score = 485 bits (1248), Expect = e-137, Method: Compositional matrix adjust. Identities = 246/308 (79%), Positives = 278/308 (90%), Gaps = 1/308 (0%) Query: 1 MNPIVVVHGGGAGPISKDRKERVHQGMVRAATVGYGILREGGSAVDAVEGAVVALEDDPE 60 M P++VVHGGGA IS +R++RV QG++RAA++G+G+LR GGSAVDAVE AV ALEDD E Sbjct: 24 MEPVLVVHGGGASCISCERRQRVRQGVIRAASLGHGVLRAGGSAVDAVEAAVAALEDDAE 83 Query: 61 FNAGCGSVLNTNGEVEMDASIMDGKDLSAGAVSAVQCIANPIKLARLVMEKTPHCFLTDQ 120 FNAG GSVL NG+VEMDASIMDG+DL AGAVSAV+CIANPIKLARLVM+KTPHCFLT Q Sbjct: 84 FNAGHGSVLTENGDVEMDASIMDGRDLGAGAVSAVRCIANPIKLARLVMDKTPHCFLTGQ 143 Query: 121 GAAQFAAAMGVPEIPGEKLVTERNKKRLEKEKHEKGAQKTDCQKNLGTVGAVALDCKGNV 180 GAA+FAA MG+ EIPGE+LVTERN+KRLEKE+ EK A DC KNLGTVGAVALDCKGNV Sbjct: 144 GAAKFAADMGISEIPGEQLVTERNRKRLEKERQEKDASSPDCPKNLGTVGAVALDCKGNV 203 Query: 181 AYATSTGGIVNKMVGRVGDSPCLGAGGYADNDIGAVSTTGHGESILKVNLARLTLFHIEQ 240 AYATSTGGIVNKM GRVGDSPC+G+GGYADN IGAVSTTGHGESILKVNLARL LFH+EQ Sbjct: 204 AYATSTGGIVNKMTGRVGDSPCIGSGGYADNSIGAVSTTGHGESILKVNLARLALFHLEQ 263 Query: 241 -GKTVEEAADLSLGYMKSRVKGLGGLIVVSKTGDWVAKWTSTSMPWAAAKDGKLHFGIDP 299 GKTV+EAADL+LGYMKSR+KGLGGLI+VS+TG+WVAKWTSTSMPWAA K GK+H GID Sbjct: 264 GGKTVDEAADLALGYMKSRLKGLGGLILVSRTGEWVAKWTSTSMPWAAVKGGKVHAGIDL 323 Query: 300 DDTTITDL 307 +DTT+TDL Sbjct: 324 NDTTVTDL 331 >2ZAK-A nrPDB Length = 320 Score = 166 bits (419), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 112/301 (37%), Positives = 159/301 (52%), Gaps = 15/301 (4%) Query: 4 IVVVHGGGAGPISK-----DRKERVHQGMVRAATVGYGILREGGSAVDAVEGAVVALEDD 58 ++ +HGG AG IS+ ++ R + + G +L G SA+D V AV LE+ Sbjct: 4 VIAIHGG-AGAISRAQMSLQQELRYIEALSAIVETGQKMLEAGESALDVVTEAVRLLEEC 62 Query: 59 PEFNAGCGSVLNTNGEVEMDASIMDGKDLSAGAVSAVQCIANPIKLARLVMEKTPHCFLT 118 P FNAG G+V + E+DA +MDG L AGAV+ V + NP+ ARLVME++PH + Sbjct: 63 PLFNAGIGAVFTRDETHELDACVMDGNTLKAGAVAGVSHLRNPVLAARLVMEQSPHVMMI 122 Query: 119 DQGAAQFAAAMGVPEIPGEKLVTERNKKRLEKEKHE------KGAQKTDCQKNLGTVGAV 172 +GA FA A G+ + E T ++L + E D ++ +G VGAV Sbjct: 123 GEGAENFAFARGMERVSPEIFSTSLRYEQLLAARKEGATVLDHSGAPLDEKQKMGAVGAV 182 Query: 173 ALDCKGNVAYATSTGGIVNKMVGRVGDSPCLGAGGYADNDIGAVSTTGHGESILKVNLAR 232 ALD GN+A ATSTGG+ NK+ GRVGDSP +GAG YA+N AVS TG GE ++ A Sbjct: 183 ALDLDGNLAAATSTGGMTNKLPGRVGDSPLVGAGCYANNASVAVSCTGTGEVFIRALAAY 242 Query: 233 -LTLFHIEQGKTVEEAADLSLGYMKSRVKGLGGLIVVSKTGDWVAKWTSTSM--PWAAAK 289 + G ++ EA + + + G GGLI + G+ + + M W A Sbjct: 243 DIAALMDYGGLSLAEACERVVMEKLPALGGSGGLIAIDHEGNVALPFNTEGMYRAWGYAG 302 Query: 290 D 290 D Sbjct: 303 D 303 >3LJQ-A nrPDB Length = 299 Score = 149 bits (375), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 94/256 (36%), Positives = 147/256 (57%), Gaps = 13/256 (5%) Query: 28 VRAATVGYGILREGGSAVDAVEGAVVALEDDP-EFNAGCGSVLNTNGEVEMDASIMDGKD 86 + A + +L +GG A+DAVE V +EDDP E + G G + +G V +DA IMD ++ Sbjct: 19 LHANVEAWKVLSKGGKALDAVEKGVRLVEDDPTERSVGYGGRPDRDGRVTLDACIMD-EN 77 Query: 87 LSAGAVSAVQCIANPIKLARLVMEKTPHCFLTDQGAAQFAAAMGVPEIPGEKLVTERNKK 146 + G+V+ ++ I NPI +AR VMEKTPH L GA +FA + G + E L+T ++K Sbjct: 78 YNIGSVACMEHIKNPISVARAVMEKTPHVMLVGDGALEFALSQGFKK---ENLLTAESEK 134 Query: 147 RLEKEKHEKGAQKTDCQKNLGTVGAVALDCKGNVAYATSTGGIVNKMVGRVGDSPCLGAG 206 ++ + +N +G +ALD +GN++ A +T G+ KM GRVGDSP +GAG Sbjct: 135 EWKEWLKTSQYKPIVNIENHDCIGMIALDAQGNLSGACTTSGMAYKMHGRVGDSPIIGAG 194 Query: 207 GYADNDIGAVSTTGHGESILKVNLARLTLFHIEQGKT----VEEAADLSLGYMKSRVKGL 262 + DN+IGA + TGHGE +++ L + + QG+T +EA + + + R K L Sbjct: 195 LFVDNEIGAATATGHGEEVIRTVGTHLVVELMNQGRTPQQACKEAVERIVKIVNRRGKNL 254 Query: 263 G----GLIVVSKTGDW 274 G I ++K G++ Sbjct: 255 KDIQVGFIALNKKGEY 270 >2A8L-A nrPDB Length = 420 Score = 142 bits (359), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 112/306 (36%), Positives = 156/306 (50%), Gaps = 43/306 (14%) Query: 4 IVVVHGGGAGPISKDRKERVHQGMVRAATVGYGILREGGSAVDAVEGAVVALEDDPEFNA 63 V+VH G AG S+ + + RA L+ G A DAV A+V LED P NA Sbjct: 43 FVLVHAG-AGYHSESKAKEYKHVCKRACQKAIEKLQAGALATDAVTAALVELEDSPFTNA 101 Query: 64 GCGSVLNTNGEVEMDASIMDGKDLSAGAVSAVQCIANPIKLA-RLVME---------KTP 113 G GS LN GE+E DASIMDGK L+ GAV A+ I NP+ +A RL+ E + P Sbjct: 102 GMGSNLNLLGEIECDASIMDGKSLNFGAVGALSGIKNPVSVANRLLCEGQKGKLSAGRIP 161 Query: 114 HCFLTDQGAAQFAAAMGVPEIPGEKLVT-------ERNKKRLE-----------KEKHEK 155 CFL +GA ++A G+P P + T +RNK++LE +K + Sbjct: 162 PCFLVGEGAYRWAVDHGIPSCPPNIMTTRFSLAAFKRNKRKLELAERVDTDFMQLKKRRQ 221 Query: 156 GAQKTDCQKNLGTVGAVALDCKGNVAYATSTGGIVNKMVGRVGDSPCLGAGGYADND--- 212 ++K + L VGAV +D +GNVA A S+GG+ K GRVG + G G +A+N Sbjct: 222 SSEKENDSGTLDAVGAVVVDHEGNVAAAVSSGGLALKHPGRVGQAALYGCGCWAENTGAH 281 Query: 213 ---IGAVSTTGHGESILKVNLARLTLFHIEQGKTVEEA-------ADLSLGYMKSRVKGL 262 AVST+G GE +++ LAR H Q + +A +S ++ S L Sbjct: 282 NPYSTAVSTSGCGEHLVRTILAR-ECSHALQAEDAHQALLETMQNKFISSPFLASEDGVL 340 Query: 263 GGLIVV 268 GG+IV+ Sbjct: 341 GGVIVL 346 >2E0Y-A nrPDB Length = 366 Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust. Identities = 17/31 (54%), Positives = 19/31 (61%), Gaps = 5/31 (16%) Query: 22 RVHQGMV-----RAATVGYGILREGGSAVDA 47 R QGMV A VG IL+EGG+AVDA Sbjct: 21 RAKQGMVASVDATATQVGVDILKEGGNAVDA 51 >2E0W-A nrPDB Length = 556 Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust. Identities = 17/31 (54%), Positives = 19/31 (61%), Gaps = 5/31 (16%) Query: 22 RVHQGMV-----RAATVGYGILREGGSAVDA 47 R QGMV A VG IL+EGG+AVDA Sbjct: 21 RAKQGMVASVDATATQVGVDILKEGGNAVDA 51 >2YO3-A nrPDB Length = 268 Score = 28.9 bits (63), Expect = 3.3, Method: Compositional matrix adjust. Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 18/88 (20%) Query: 178 GNVAYATSTGGIVNKMVGRVGDSPCLGAGGYADNDIGAVSTTGHGESILKVNLARLTLFH 237 G+V Y T+ G VN V +GD G+GG IG VS + VN A+L Sbjct: 156 GSVRYETNADGSVNYSVLNLGD----GSGGTT--RIGNVSAAVNDTD--AVNYAQLK--- 204 Query: 238 IEQGKTVEEA---ADLSLGYMKSRVKGL 262 ++VEEA D +G M S++KG+ Sbjct: 205 ----RSVEEANTYTDQKMGEMNSKIKGV 228 >4E0T-A nrPDB Length = 428 Score = 28.5 bits (62), Expect = 3.4, Method: Compositional matrix adjust. Identities = 30/103 (29%), Positives = 44/103 (42%), Gaps = 14/103 (13%) Query: 140 VTERNKKRLEKEKHEKGAQKTDCQKNLGTVGAVALDCKGNVAYATSTGGIVNKMVGRVGD 199 +T ++++ L +E+ K T+ Q V A+ L G VA GI G+ G Sbjct: 167 LTAKDERNLNEEQLTKYL--TNFQVKTQYVVALDLRKTGIVAKEYFFPGIKCAATGQTGS 224 Query: 200 SPCLGAGGYADNDIGAVSTTGHGESILKVNLARLTLFHIEQGK 242 + C GA I AV GH +S L +L H +Q K Sbjct: 225 NACFGA-------IRAVDKDGHLDS-----LCQLIEAHFQQSK 255 >2YVV-A nrPDB Length = 338 Score = 27.3 bits (59), Expect = 7.6, Method: Compositional matrix adjust. Identities = 32/92 (34%), Positives = 39/92 (42%), Gaps = 16/92 (17%) Query: 132 PEIPGEKLVTERNKKRLEKEKHE----KGAQKTDCQKNLGTVGAV---ALDCK--GNVAY 182 P I G E +K +K E K K + K L G V L K VAY Sbjct: 67 PNIDGLATKVETAQKLQQKADKETVYTKAESKQELDKKLNLKGGVMTGQLKFKPAATVAY 126 Query: 183 ATSTGGIVNKMVGRVGDSPCLGAG--GYADND 212 ++STGG VN + S GAG Y+DND Sbjct: 127 SSSTGGAVN-----IDLSSTRGAGVVVYSDND 153 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4O0G-A nrPDB 482 e-137 4O47-A nrPDB 438 e-123 2ZAK-A nrPDB 350 3e-97 3LJQ-A nrPDB 326 9e-90 2A8L-A nrPDB 312 1e-85 Sequences not found previously or not previously below threshold: 4HOQ-A nrPDB 35 0.054 5ZQT-A nrPDB 30 1.1 3H5A-A nrPDB 30 1.1 4V19-Q nrPDB 30 1.4 6C0F-v nrPDB 29 2.3 1E1N-A nrPDB 29 2.5 3FGC-A nrPDB 29 2.7 3NL2-A nrPDB 29 3.0 3RNR-A nrPDB 28 6.2 CONVERGED! >4O0G-A nrPDB Length = 309 Score = 482 bits (1241), Expect = e-137, Method: Composition-based stats. Identities = 307/308 (99%), Positives = 307/308 (99%) Query: 1 MNPIVVVHGGGAGPISKDRKERVHQGMVRAATVGYGILREGGSAVDAVEGAVVALEDDPE 60 MNPIVVVHGGGAGPISKDRKERVHQGMVRAATVGYGILREGGSAVDAVEGAVVALEDDPE Sbjct: 2 MNPIVVVHGGGAGPISKDRKERVHQGMVRAATVGYGILREGGSAVDAVEGAVVALEDDPE 61 Query: 61 FNAGCGSVLNTNGEVEMDASIMDGKDLSAGAVSAVQCIANPIKLARLVMEKTPHCFLTDQ 120 FNAGCGSVLNTNGEVEMDASIMDGKDLSAGAVSAVQCIANPIKLARLVMEKTPHCFLTDQ Sbjct: 62 FNAGCGSVLNTNGEVEMDASIMDGKDLSAGAVSAVQCIANPIKLARLVMEKTPHCFLTDQ 121 Query: 121 GAAQFAAAMGVPEIPGEKLVTERNKKRLEKEKHEKGAQKTDCQKNLGTVGAVALDCKGNV 180 GAAQFAAAMGVPEIPGEKLVTERNKKRLEKEKHEKGAQKTDCQKNLGTVGAVALDCKGNV Sbjct: 122 GAAQFAAAMGVPEIPGEKLVTERNKKRLEKEKHEKGAQKTDCQKNLGTVGAVALDCKGNV 181 Query: 181 AYATSTGGIVNKMVGRVGDSPCLGAGGYADNDIGAVSTTGHGESILKVNLARLTLFHIEQ 240 AYATSTGGIVNKMVGRVGDSPCLGAGGYADNDIGAVST GHGESILKVNLARLTLFHIEQ Sbjct: 182 AYATSTGGIVNKMVGRVGDSPCLGAGGYADNDIGAVSTVGHGESILKVNLARLTLFHIEQ 241 Query: 241 GKTVEEAADLSLGYMKSRVKGLGGLIVVSKTGDWVAKWTSTSMPWAAAKDGKLHFGIDPD 300 GKTVEEAADLSLGYMKSRVKGLGGLIVVSKTGDWVAKWTSTSMPWAAAKDGKLHFGIDPD Sbjct: 242 GKTVEEAADLSLGYMKSRVKGLGGLIVVSKTGDWVAKWTSTSMPWAAAKDGKLHFGIDPD 301 Query: 301 DTTITDLP 308 DTTITDLP Sbjct: 302 DTTITDLP 309 >4O47-A nrPDB Length = 332 Score = 438 bits (1125), Expect = e-123, Method: Composition-based stats. Identities = 246/308 (79%), Positives = 278/308 (90%), Gaps = 1/308 (0%) Query: 1 MNPIVVVHGGGAGPISKDRKERVHQGMVRAATVGYGILREGGSAVDAVEGAVVALEDDPE 60 M P++VVHGGGA IS +R++RV QG++RAA++G+G+LR GGSAVDAVE AV ALEDD E Sbjct: 24 MEPVLVVHGGGASCISCERRQRVRQGVIRAASLGHGVLRAGGSAVDAVEAAVAALEDDAE 83 Query: 61 FNAGCGSVLNTNGEVEMDASIMDGKDLSAGAVSAVQCIANPIKLARLVMEKTPHCFLTDQ 120 FNAG GSVL NG+VEMDASIMDG+DL AGAVSAV+CIANPIKLARLVM+KTPHCFLT Q Sbjct: 84 FNAGHGSVLTENGDVEMDASIMDGRDLGAGAVSAVRCIANPIKLARLVMDKTPHCFLTGQ 143 Query: 121 GAAQFAAAMGVPEIPGEKLVTERNKKRLEKEKHEKGAQKTDCQKNLGTVGAVALDCKGNV 180 GAA+FAA MG+ EIPGE+LVTERN+KRLEKE+ EK A DC KNLGTVGAVALDCKGNV Sbjct: 144 GAAKFAADMGISEIPGEQLVTERNRKRLEKERQEKDASSPDCPKNLGTVGAVALDCKGNV 203 Query: 181 AYATSTGGIVNKMVGRVGDSPCLGAGGYADNDIGAVSTTGHGESILKVNLARLTLFHIEQ 240 AYATSTGGIVNKM GRVGDSPC+G+GGYADN IGAVSTTGHGESILKVNLARL LFH+EQ Sbjct: 204 AYATSTGGIVNKMTGRVGDSPCIGSGGYADNSIGAVSTTGHGESILKVNLARLALFHLEQ 263 Query: 241 -GKTVEEAADLSLGYMKSRVKGLGGLIVVSKTGDWVAKWTSTSMPWAAAKDGKLHFGIDP 299 GKTV+EAADL+LGYMKSR+KGLGGLI+VS+TG+WVAKWTSTSMPWAA K GK+H GID Sbjct: 264 GGKTVDEAADLALGYMKSRLKGLGGLILVSRTGEWVAKWTSTSMPWAAVKGGKVHAGIDL 323 Query: 300 DDTTITDL 307 +DTT+TDL Sbjct: 324 NDTTVTDL 331 >2ZAK-A nrPDB Length = 320 Score = 350 bits (899), Expect = 3e-97, Method: Composition-based stats. Identities = 112/301 (37%), Positives = 159/301 (52%), Gaps = 15/301 (4%) Query: 4 IVVVHGGGAGPISK-----DRKERVHQGMVRAATVGYGILREGGSAVDAVEGAVVALEDD 58 ++ +HGG AG IS+ ++ R + + G +L G SA+D V AV LE+ Sbjct: 4 VIAIHGG-AGAISRAQMSLQQELRYIEALSAIVETGQKMLEAGESALDVVTEAVRLLEEC 62 Query: 59 PEFNAGCGSVLNTNGEVEMDASIMDGKDLSAGAVSAVQCIANPIKLARLVMEKTPHCFLT 118 P FNAG G+V + E+DA +MDG L AGAV+ V + NP+ ARLVME++PH + Sbjct: 63 PLFNAGIGAVFTRDETHELDACVMDGNTLKAGAVAGVSHLRNPVLAARLVMEQSPHVMMI 122 Query: 119 DQGAAQFAAAMGVPEIPGEKLVTERNKKRLEKEKHE------KGAQKTDCQKNLGTVGAV 172 +GA FA A G+ + E T ++L + E D ++ +G VGAV Sbjct: 123 GEGAENFAFARGMERVSPEIFSTSLRYEQLLAARKEGATVLDHSGAPLDEKQKMGAVGAV 182 Query: 173 ALDCKGNVAYATSTGGIVNKMVGRVGDSPCLGAGGYADNDIGAVSTTGHGESILKVNLAR 232 ALD GN+A ATSTGG+ NK+ GRVGDSP +GAG YA+N AVS TG GE ++ A Sbjct: 183 ALDLDGNLAAATSTGGMTNKLPGRVGDSPLVGAGCYANNASVAVSCTGTGEVFIRALAAY 242 Query: 233 -LTLFHIEQGKTVEEAADLSLGYMKSRVKGLGGLIVVSKTGDWVAKWTSTSM--PWAAAK 289 + G ++ EA + + + G GGLI + G+ + + M W A Sbjct: 243 DIAALMDYGGLSLAEACERVVMEKLPALGGSGGLIAIDHEGNVALPFNTEGMYRAWGYAG 302 Query: 290 D 290 D Sbjct: 303 D 303 >3LJQ-A nrPDB Length = 299 Score = 326 bits (835), Expect = 9e-90, Method: Composition-based stats. Identities = 95/258 (36%), Positives = 148/258 (57%), Gaps = 13/258 (5%) Query: 28 VRAATVGYGILREGGSAVDAVEGAVVALEDDP-EFNAGCGSVLNTNGEVEMDASIMDGKD 86 + A + +L +GG A+DAVE V +EDDP E + G G + +G V +DA IMD ++ Sbjct: 19 LHANVEAWKVLSKGGKALDAVEKGVRLVEDDPTERSVGYGGRPDRDGRVTLDACIMD-EN 77 Query: 87 LSAGAVSAVQCIANPIKLARLVMEKTPHCFLTDQGAAQFAAAMGVPEIPGEKLVTERNKK 146 + G+V+ ++ I NPI +AR VMEKTPH L GA +FA + G + E L+T ++K Sbjct: 78 YNIGSVACMEHIKNPISVARAVMEKTPHVMLVGDGALEFALSQGFKK---ENLLTAESEK 134 Query: 147 RLEKEKHEKGAQKTDCQKNLGTVGAVALDCKGNVAYATSTGGIVNKMVGRVGDSPCLGAG 206 ++ + +N +G +ALD +GN++ A +T G+ KM GRVGDSP +GAG Sbjct: 135 EWKEWLKTSQYKPIVNIENHDCIGMIALDAQGNLSGACTTSGMAYKMHGRVGDSPIIGAG 194 Query: 207 GYADNDIGAVSTTGHGESILKVNLARLTLFHIEQGKT----VEEAADLSLGYMKSRVKGL 262 + DN+IGA + TGHGE +++ L + + QG+T +EA + + + R K L Sbjct: 195 LFVDNEIGAATATGHGEEVIRTVGTHLVVELMNQGRTPQQACKEAVERIVKIVNRRGKNL 254 Query: 263 G----GLIVVSKTGDWVA 276 G I ++K G++ A Sbjct: 255 KDIQVGFIALNKKGEYGA 272 >2A8L-A nrPDB Length = 420 Score = 312 bits (800), Expect = 1e-85, Method: Composition-based stats. Identities = 112/306 (36%), Positives = 156/306 (50%), Gaps = 43/306 (14%) Query: 4 IVVVHGGGAGPISKDRKERVHQGMVRAATVGYGILREGGSAVDAVEGAVVALEDDPEFNA 63 V+VH G AG S+ + + RA L+ G A DAV A+V LED P NA Sbjct: 43 FVLVHAG-AGYHSESKAKEYKHVCKRACQKAIEKLQAGALATDAVTAALVELEDSPFTNA 101 Query: 64 GCGSVLNTNGEVEMDASIMDGKDLSAGAVSAVQCIANPIKLA-RLVME---------KTP 113 G GS LN GE+E DASIMDGK L+ GAV A+ I NP+ +A RL+ E + P Sbjct: 102 GMGSNLNLLGEIECDASIMDGKSLNFGAVGALSGIKNPVSVANRLLCEGQKGKLSAGRIP 161 Query: 114 HCFLTDQGAAQFAAAMGVPEIPGEKLVT-------ERNKKRLE-----------KEKHEK 155 CFL +GA ++A G+P P + T +RNK++LE +K + Sbjct: 162 PCFLVGEGAYRWAVDHGIPSCPPNIMTTRFSLAAFKRNKRKLELAERVDTDFMQLKKRRQ 221 Query: 156 GAQKTDCQKNLGTVGAVALDCKGNVAYATSTGGIVNKMVGRVGDSPCLGAGGYADND--- 212 ++K + L VGAV +D +GNVA A S+GG+ K GRVG + G G +A+N Sbjct: 222 SSEKENDSGTLDAVGAVVVDHEGNVAAAVSSGGLALKHPGRVGQAALYGCGCWAENTGAH 281 Query: 213 ---IGAVSTTGHGESILKVNLARLTLFHIEQGKTVEEA-------ADLSLGYMKSRVKGL 262 AVST+G GE +++ LAR H Q + +A +S ++ S L Sbjct: 282 NPYSTAVSTSGCGEHLVRTILAR-ECSHALQAEDAHQALLETMQNKFISSPFLASEDGVL 340 Query: 263 GGLIVV 268 GG+IV+ Sbjct: 341 GGVIVL 346 >4HOQ-A nrPDB Length = 482 Score = 34.7 bits (78), Expect = 0.054, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 7/64 (10%) Query: 31 ATVGYGILREGGS----AVDAVEGAVVALEDDPEFNAGCGSVLNTNGEVEMDASIMDGKD 86 G+ +L+ GG A A E A+ D+PEFN G + + + + S+ K Sbjct: 142 CEKGWALLKFGGKYYQKAKAAFEKALEVEPDNPEFNIGYAITVYRLDDSDREGSV---KS 198 Query: 87 LSAG 90 S G Sbjct: 199 FSLG 202 >5ZQT-A nrPDB Length = 473 Score = 30.5 bits (67), Expect = 1.1, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 6/66 (9%) Query: 170 GAVALDCKGNVAYATSTGGIVNKMVGRVGDSPCLGAGG-YADNDIGAVSTTGHGESILKV 228 G V D ++ A G+ K+ V D+ AGG Y DND+ A G G Sbjct: 176 GTVGEDVVAELSRAMERQGLDMKVTALVNDTVGTLAGGRYVDNDVAAAVILGTG-----T 230 Query: 229 NLARLT 234 N A + Sbjct: 231 NAAYVE 236 >3H5A-A nrPDB Length = 358 Score = 30.5 bits (67), Expect = 1.1, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 27/69 (39%), Gaps = 8/69 (11%) Query: 202 CLGAGGYADNDIGAVSTTGHGESIL-------KVNLARLTLF-HIEQGKTVEEAADLSLG 253 LG GG ++ ++T+G GE IL NL R LF + GK E L Sbjct: 120 ILGCGGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELL 179 Query: 254 YMKSRVKGL 262 S + Sbjct: 180 KRNSEISVS 188 >4V19-Q nrPDB Length = 251 Score = 30.1 bits (66), Expect = 1.4, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 32/77 (41%), Gaps = 11/77 (14%) Query: 90 GAVSAVQCIANPIKLARLVMEKTPHCFLTDQGAAQFAAAMGVPEIPGEKL---VTERNKK 146 G A+ P+K RL++E C +F G ++ KL +++ Sbjct: 142 GGKGAIDHYVTPVKAGRLIVEMGGRC--------EFKEVQGFLDLVAHKLPFPAKAVSRE 193 Query: 147 RLEKEKHEKGAQKTDCQ 163 LEK + ++ ++ + Q Sbjct: 194 TLEKMRKDQEERERNNQ 210 >6C0F-v nrPDB Length = 453 Score = 29.3 bits (64), Expect = 2.3, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 43/109 (39%), Gaps = 3/109 (2%) Query: 92 VSAVQCIANPIKLARLVMEKTPHCFLTDQGAAQFAAAMGVPEIPGEKLVTERNKKRLEKE 151 VS Q I P+ AR + F+ ++ +M I ++ RN KRL K Sbjct: 166 VSMFQNIFPPLNPARTSLNSIKRVFMINKDRETGEISMRHYFIDIREVEISRNLKRLYKA 225 Query: 152 KHEKGAQKTDCQKNLGTVGAVALDCKGNVAYATSTGGIVNKMVGRVGDS 200 K+ + + + ++ LD + TS I + + RV D+ Sbjct: 226 KNNLSKTVPNLHRKED-ISSLILDHD--LGAYTSESEIEDDAIVRVVDN 271 >1E1N-A nrPDB Length = 460 Score = 29.3 bits (64), Expect = 2.5, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 2/56 (3%) Query: 188 GIVNKMVGRVGDSPCLGAGGYADNDIGAVSTTGHGESIL--KVNLARLTLFHIEQG 241 G+V M GRV D P L G+ V TT +S L ++ L L H+ G Sbjct: 347 GVVPNMEGRVVDVPGLYCSGWVKRGPTGVITTTMTDSFLTGQILLQDLKAGHLPSG 402 >3FGC-A nrPDB Length = 355 Score = 28.9 bits (63), Expect = 2.7, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 41/103 (39%), Gaps = 6/103 (5%) Query: 85 KDLSAGAVSA-VQCIANP-IKL-ARLVMEKTPHCFLTDQGAA--QFAAAMGVPEIPGEKL 139 + + G ++A + I P I+L + ++ + A+ ++AA G+P I + Sbjct: 137 EGFNEGYIAADNEHIKFPKIQLNPSAYTQGGAPVYVVAESASTTEWAAERGLPMILSWII 196 Query: 140 VTERNKKRLEKEKHEKGAQKTDCQKNLGTVGAV-ALDCKGNVA 181 T K +L+ D K + + ++D N A Sbjct: 197 NTHEKKAQLDLYNEVATEHGYDVTKIDHCLSYITSVDHDSNRA 239 >3NL2-A nrPDB Length = 540 Score = 28.9 bits (63), Expect = 3.0, Method: Composition-based stats. Identities = 9/32 (28%), Positives = 18/32 (56%) Query: 177 KGNVAYATSTGGIVNKMVGRVGDSPCLGAGGY 208 +GN+ +A G ++ K G++ C G+G + Sbjct: 482 EGNLFHAVVAGVMLYKAAGKIASEKCNGSGSF 513 >3RNR-A nrPDB Length = 211 Score = 27.8 bits (60), Expect = 6.2, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 4/52 (7%) Query: 22 RVHQGMVRAATVGYGILREGGSAVDAVEGAVVALEDDPEFNAGCGSVLNTNG 73 R + RA + G+L GGS +DAV A A+ A G +L G Sbjct: 24 RGDEAAQRALSASVGVLDAGGSPLDAVLAAQAAVH----RWASQGGILGRTG 71 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.308 0.130 0.339 Lambda K H 0.267 0.0398 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 11,004,579 Number of Sequences: 36641 Number of extensions: 412632 Number of successful extensions: 1025 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 20 Number of HSP's successfully gapped in prelim test: 18 Number of HSP's that attempted gapping in prelim test: 981 Number of HSP's gapped (non-prelim): 40 length of query: 308 length of database: 10,336,785 effective HSP length: 97 effective length of query: 211 effective length of database: 6,782,608 effective search space: 1431130288 effective search space used: 1431130288 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.6 bits) S2: 59 (27.4 bits)