BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q72EC8 (297 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 2XVY-A nrPDB 542 e-155 1QGO-A nrPDB 148 2e-36 4QBL-A nrPDB 32 0.48 3EGE-A nrPDB 31 0.52 2OLS-A nrPDB 31 0.81 6FAH-B nrPDB 30 1.4 4RUH-A nrPDB 29 2.8 6NEQ-h nrPDB 28 4.2 6BOA-A nrPDB 28 5.3 5J7Z-A nrPDB 27 8.1 >2XVY-A nrPDB Length = 269 Score = 542 bits (1396), Expect = e-155, Method: Compositional matrix adjust. Identities = 269/269 (100%), Positives = 269/269 (100%) Query: 29 GHGAPKAQKTGILLVAFGTSVEEARPALDKMGDRVRAAHPDIPVRWAYTAKMIRAKLRAE 88 GHGAPKAQKTGILLVAFGTSVEEARPALDKMGDRVRAAHPDIPVRWAYTAKMIRAKLRAE Sbjct: 1 GHGAPKAQKTGILLVAFGTSVEEARPALDKMGDRVRAAHPDIPVRWAYTAKMIRAKLRAE 60 Query: 89 GIAAPSPAEALAGMAEEGFTHVAVQSLHTIPGEEFHGLLETAHAFQGLPKGLTRVSVGLP 148 GIAAPSPAEALAGMAEEGFTHVAVQSLHTIPGEEFHGLLETAHAFQGLPKGLTRVSVGLP Sbjct: 61 GIAAPSPAEALAGMAEEGFTHVAVQSLHTIPGEEFHGLLETAHAFQGLPKGLTRVSVGLP 120 Query: 149 LIGTTADAEAVAEALVASLPADRKPGEPVVFMGHGTPHPADICYPGLQYYLWRLDPDLLV 208 LIGTTADAEAVAEALVASLPADRKPGEPVVFMGHGTPHPADICYPGLQYYLWRLDPDLLV Sbjct: 121 LIGTTADAEAVAEALVASLPADRKPGEPVVFMGHGTPHPADICYPGLQYYLWRLDPDLLV 180 Query: 209 GTVEGSPSFDNVMAELDVRKAKRVWLMPLMAVAGDHARNDMAGDEDDSWTSQLARRGIEA 268 GTVEGSPSFDNVMAELDVRKAKRVWLMPLMAVAGDHARNDMAGDEDDSWTSQLARRGIEA Sbjct: 181 GTVEGSPSFDNVMAELDVRKAKRVWLMPLMAVAGDHARNDMAGDEDDSWTSQLARRGIEA 240 Query: 269 KPVLHGTAESDAVAAIWLRHLDDALARLN 297 KPVLHGTAESDAVAAIWLRHLDDALARLN Sbjct: 241 KPVLHGTAESDAVAAIWLRHLDDALARLN 269 >1QGO-A nrPDB Length = 264 Score = 148 bits (374), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 97/259 (37%), Positives = 141/259 (54%), Gaps = 6/259 (2%) Query: 37 KTGILLVAFGTSVEEARPALDKMGDR-VRAAHPDIPVRWAYTAKMIRAKLRA-EGIAAPS 94 K +L+V+FGTS + +R + A+ PD + A+T+ MI KLR +GI + Sbjct: 2 KKALLVVSFGTSYHDTCEKNIVACERDLAASCPDRDLFRAFTSGMIIRKLRQRDGIDIDT 61 Query: 95 PAEALAGMAEEGFTHVAVQSLHTIPGEEFHGLLETAHAFQGLPKGLTRVSVGLPLIGTTA 154 P +AL +A +G+ VA+QSLH I G+E+ ++ + L TR+++G+PL+ + Sbjct: 62 PLQALQKLAAQGYQDVAIQSLHIINGDEYEKIVREVQLLRPL---FTRLTLGVPLLSSHN 118 Query: 155 DAEAVAEALVASLPADRKPGEPVVFMGHGTPHPADICYPGLQYYLWRLDPDLLVGTVEGS 214 D + +AL +P+ R+ E VVFMGHG H A Y L + + VG VE Sbjct: 119 DYVQLMQALRQQMPSLRQT-EKVVFMGHGASHHAFAAYACLDHMMTAQRFPARVGAVESY 177 Query: 215 PSFDNVMAELDVRKAKRVWLMPLMAVAGDHARNDMAGDEDDSWTSQLARRGIEAKPVLHG 274 P D ++ L V LMPLM VAGDHA NDMA D+ DSW + GI A P L G Sbjct: 178 PEVDILIDSLRDEGVTGVHLMPLMLVAGDHAINDMASDDGDSWKMRFNAAGIPATPWLSG 237 Query: 275 TAESDAVAAIWLRHLDDAL 293 E+ A+ A+++ HL AL Sbjct: 238 LGENPAIRAMFVAHLHQAL 256 >4QBL-A nrPDB Length = 145 Score = 31.6 bits (70), Expect = 0.48, Method: Compositional matrix adjust. Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 5/92 (5%) Query: 30 HGAPKAQKTGILLVAFGTSVEEARPALDKMGDRVRAAHPDIPV---RWAYTAKMIRAKLR 86 H +P K + + G +MG V+A +PD+ + R AY I K Sbjct: 33 HHSPNGGKRAAKIGSSGKRYSPEAAKFKRMG--VKAGYPDLIIDIARGAYHGLRIEIKKD 90 Query: 87 AEGIAAPSPAEALAGMAEEGFTHVAVQSLHTI 118 A P+ E + +A+EG+ V + + + Sbjct: 91 GNSYATPAQKERIEMLAKEGYCAVVAKGIDNV 122 >3EGE-A nrPDB Length = 261 Score = 31.2 bits (69), Expect = 0.52, Method: Compositional matrix adjust. Identities = 19/64 (29%), Positives = 29/64 (45%) Query: 220 VMAELDVRKAKRVWLMPLMAVAGDHARNDMAGDEDDSWTSQLARRGIEAKPVLHGTAESD 279 V+ D+R A+R+WL + A + DE + + +R +EA P L SD Sbjct: 127 VLLTFDIRLAQRIWLYDYFPFLWEDALRFLPLDEQINLLQENTKRRVEAIPFLLPHDLSD 186 Query: 280 AVAA 283 AA Sbjct: 187 LFAA 190 >2OLS-A nrPDB Length = 794 Score = 30.8 bits (68), Expect = 0.81, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 1/60 (1%) Query: 139 GLTRVSVGLPLIGTTADAEAVAEALVASLPADRKPGEPVVFMGHGTPHPADICYPGLQYY 198 GLT V + +P + T +AEAV +AL + K G ++ M P A + LQY+ Sbjct: 638 GLTNVEIMIPFVRTLGEAEAVVKALKENGLERGKNGLRLIMMCE-LPSNAVLAEQFLQYF 696 >6FAH-B nrPDB Length = 262 Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 3/54 (5%) Query: 137 PKGLTRVSVGLPLIGTTADAEAVAEALVASLPADRKPGEPVVFMGHGTPHPADI 190 PK T + G+P I DA A+ ALV D PG V+ M G P +++ Sbjct: 20 PKTGTMIREGVPSILNPDDANALEAALVIK---DENPGTEVIVMTMGPPQASEM 70 >4RUH-A nrPDB Length = 475 Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust. Identities = 42/149 (28%), Positives = 63/149 (42%), Gaps = 30/149 (20%) Query: 119 PGEEFHGLLETAHAFQGLPKGLTRVSVG------LPLIGTTADAEAVAEALVASLPADRK 172 P HG+ E A + G + R VG +P + E V L R Sbjct: 312 PSLSLHGI-EGAFSGSGAKTVIPRKVVGKFSIRLVPNMTPEVVGEQVTSYLTKKFAELRS 370 Query: 173 PGEPVVFMGH-GTPHPADICYPGLQYYL---------WRLDPDLLVGTVEGSPSFDNVMA 222 P E V+MGH G P +D +P +YL + ++PDL T EG ++ Sbjct: 371 PNEFKVYMGHGGKPWVSDFSHP---HYLAGRRAMKTVFGVEPDL---TREGG----SIPV 420 Query: 223 ELDVRKA--KRVWLMPL-MAVAGDHARND 248 L ++A K V L+P+ A G H++N+ Sbjct: 421 TLTFQEATGKNVMLLPVGSADDGAHSQNE 449 >6NEQ-h nrPDB Length = 386 Score = 28.1 bits (61), Expect = 4.2, Method: Compositional matrix adjust. Identities = 18/81 (22%), Positives = 36/81 (44%), Gaps = 11/81 (13%) Query: 216 SFDNVMAELDVRKAK--RVWLMPLMAVAGDHARNDMAGDEDDSWTSQLARRGI------- 266 SF N+++++ V ++ R P+ + D +D E+ + + R+ I Sbjct: 189 SFSNIISDMKVARSSTARASTRPVHQIQFDEGADDFVDREETADLRKRFRKNIFKGKRLN 248 Query: 267 --EAKPVLHGTAESDAVAAIW 285 E KPV E++A ++W Sbjct: 249 IFELKPVTEEAPETEAAPSLW 269 >6BOA-A nrPDB Length = 742 Score = 28.1 bits (61), Expect = 5.3, Method: Compositional matrix adjust. Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 3/87 (3%) Query: 202 LDPDLLVGTVEGSPSFDNVMAELDVRKAKRVWLMPLMAVAGDHARNDMAGDEDDSWTSQL 261 L P L G + F ++M + RK + PL + D D +GDE + Sbjct: 241 LTPFKLAGVEGNTVMFQHLMQK---RKHTQWTYGPLTSTLYDLTEIDSSGDEQSLLELII 297 Query: 262 ARRGIEAKPVLHGTAESDAVAAIWLRH 288 + EA+ +L T + V+ W R+ Sbjct: 298 TTKKREARQILDQTPVKELVSLKWKRY 324 >5J7Z-A nrPDB Length = 500 Score = 27.3 bits (59), Expect = 8.1, Method: Compositional matrix adjust. Identities = 11/20 (55%), Positives = 14/20 (70%) Query: 55 ALDKMGDRVRAAHPDIPVRW 74 A+ K+ D VRA +P IPV W Sbjct: 247 AMQKLTDAVRAQNPTIPVYW 266 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 2XVY-A nrPDB 432 e-122 1QGO-A nrPDB 400 e-112 Sequences not found previously or not previously below threshold: 1CBF-A nrPDB 52 3e-07 4RUH-A nrPDB 31 0.63 2RF1-A nrPDB 30 1.0 2VWT-A nrPDB 30 1.2 1QO2-A nrPDB 30 1.4 1YBF-A nrPDB 30 1.8 5ED4-A nrPDB 30 1.9 4MVT-A nrPDB 29 2.4 4AKV-A nrPDB 29 2.9 5VYL-A nrPDB 28 3.5 3LYH-A nrPDB 28 3.7 2CY8-A nrPDB 28 4.1 4V93-A4 nrPDB 28 4.2 1U8S-A nrPDB 28 4.6 6OIK-A nrPDB 28 4.6 3DFG-A nrPDB 28 5.4 4UPI-A nrPDB 28 5.8 4GSA-A nrPDB 28 6.5 >2XVY-A nrPDB Length = 269 Score = 432 bits (1111), Expect = e-122, Method: Composition-based stats. Identities = 269/269 (100%), Positives = 269/269 (100%) Query: 29 GHGAPKAQKTGILLVAFGTSVEEARPALDKMGDRVRAAHPDIPVRWAYTAKMIRAKLRAE 88 GHGAPKAQKTGILLVAFGTSVEEARPALDKMGDRVRAAHPDIPVRWAYTAKMIRAKLRAE Sbjct: 1 GHGAPKAQKTGILLVAFGTSVEEARPALDKMGDRVRAAHPDIPVRWAYTAKMIRAKLRAE 60 Query: 89 GIAAPSPAEALAGMAEEGFTHVAVQSLHTIPGEEFHGLLETAHAFQGLPKGLTRVSVGLP 148 GIAAPSPAEALAGMAEEGFTHVAVQSLHTIPGEEFHGLLETAHAFQGLPKGLTRVSVGLP Sbjct: 61 GIAAPSPAEALAGMAEEGFTHVAVQSLHTIPGEEFHGLLETAHAFQGLPKGLTRVSVGLP 120 Query: 149 LIGTTADAEAVAEALVASLPADRKPGEPVVFMGHGTPHPADICYPGLQYYLWRLDPDLLV 208 LIGTTADAEAVAEALVASLPADRKPGEPVVFMGHGTPHPADICYPGLQYYLWRLDPDLLV Sbjct: 121 LIGTTADAEAVAEALVASLPADRKPGEPVVFMGHGTPHPADICYPGLQYYLWRLDPDLLV 180 Query: 209 GTVEGSPSFDNVMAELDVRKAKRVWLMPLMAVAGDHARNDMAGDEDDSWTSQLARRGIEA 268 GTVEGSPSFDNVMAELDVRKAKRVWLMPLMAVAGDHARNDMAGDEDDSWTSQLARRGIEA Sbjct: 181 GTVEGSPSFDNVMAELDVRKAKRVWLMPLMAVAGDHARNDMAGDEDDSWTSQLARRGIEA 240 Query: 269 KPVLHGTAESDAVAAIWLRHLDDALARLN 297 KPVLHGTAESDAVAAIWLRHLDDALARLN Sbjct: 241 KPVLHGTAESDAVAAIWLRHLDDALARLN 269 >1QGO-A nrPDB Length = 264 Score = 400 bits (1027), Expect = e-112, Method: Composition-based stats. Identities = 97/259 (37%), Positives = 141/259 (54%), Gaps = 6/259 (2%) Query: 37 KTGILLVAFGTSVEEARPALDKMGDR-VRAAHPDIPVRWAYTAKMIRAKLRA-EGIAAPS 94 K +L+V+FGTS + +R + A+ PD + A+T+ MI KLR +GI + Sbjct: 2 KKALLVVSFGTSYHDTCEKNIVACERDLAASCPDRDLFRAFTSGMIIRKLRQRDGIDIDT 61 Query: 95 PAEALAGMAEEGFTHVAVQSLHTIPGEEFHGLLETAHAFQGLPKGLTRVSVGLPLIGTTA 154 P +AL +A +G+ VA+QSLH I G+E+ ++ + L TR+++G+PL+ + Sbjct: 62 PLQALQKLAAQGYQDVAIQSLHIINGDEYEKIVREVQLLRPL---FTRLTLGVPLLSSHN 118 Query: 155 DAEAVAEALVASLPADRKPGEPVVFMGHGTPHPADICYPGLQYYLWRLDPDLLVGTVEGS 214 D + +AL +P+ R+ E VVFMGHG H A Y L + + VG VE Sbjct: 119 DYVQLMQALRQQMPSLRQT-EKVVFMGHGASHHAFAAYACLDHMMTAQRFPARVGAVESY 177 Query: 215 PSFDNVMAELDVRKAKRVWLMPLMAVAGDHARNDMAGDEDDSWTSQLARRGIEAKPVLHG 274 P D ++ L V LMPLM VAGDHA NDMA D+ DSW + GI A P L G Sbjct: 178 PEVDILIDSLRDEGVTGVHLMPLMLVAGDHAINDMASDDGDSWKMRFNAAGIPATPWLSG 237 Query: 275 TAESDAVAAIWLRHLDDAL 293 E+ A+ A+++ HL AL Sbjct: 238 LGENPAIRAMFVAHLHQAL 256 >1CBF-A nrPDB Length = 285 Score = 52.0 bits (123), Expect = 3e-07, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 16/27 (59%) Query: 267 EAKPVLHGTAESDAVAAIWLRHLDDAL 293 A P L G E+ A+ A+++ HL AL Sbjct: 251 PATPWLSGLGENPAIRAMFVAHLHQAL 277 >4RUH-A nrPDB Length = 475 Score = 31.2 bits (69), Expect = 0.63, Method: Composition-based stats. Identities = 35/141 (24%), Positives = 55/141 (39%), Gaps = 12/141 (8%) Query: 114 SLHTIPGEEFHGLLETAHAFQGLPKGLTRVSVGLPLIGTTADAEAVAEALVASLPADRKP 173 SLH I G +T + + K R+ +P + E V L R P Sbjct: 315 SLHGIEGAFSGSGAKTVIPRKVVGKFSIRL---VPNMTPEVVGEQVTSYLTKKFAELRSP 371 Query: 174 GEPVVFMGHGT-PHPADICYPGLQYYLWRLDPDLLVGTVEG--SPSFDNVMAELDVRKAK 230 E V+MGHG P +D +P +YL V VE + ++ L ++A Sbjct: 372 NEFKVYMGHGGKPWVSDFSHP---HYLAGRRAMKTVFGVEPDLTREGGSIPVTLTFQEAT 428 Query: 231 RVWLMPLMAVAGD---HARND 248 +M L + D H++N+ Sbjct: 429 GKNVMLLPVGSADDGAHSQNE 449 >2RF1-A nrPDB Length = 298 Score = 30.4 bits (67), Expect = 1.0, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 50/135 (37%), Gaps = 20/135 (14%) Query: 157 EAVAEALVASLPADRKPGEPVVFMGHGTPHPADICYP-----------GLQYYLWRLDPD 205 E+ + ++A + K G+P+VF+G PHP + + G Y + + Sbjct: 153 ESSEQGMLAQVARAEKSGDPIVFLGW-EPHPMNANFKLTYLSGGDDVFGPNYGGATVHTN 211 Query: 206 LLVGTVEGSPSFDNVMAELDVRKAKRVWLMPLMAVAGDHARNDMAGDEDDSWTSQLARRG 265 + G P+ D ++ L +M + G+ A +W + + Sbjct: 212 VRAGYTTECPNVDKLLQNLSFSLQMENEIMGKILNDGEDPEKAAA-----AW-LKDNPQS 265 Query: 266 IEAKPVLHGTAESDA 280 IE P L G A D Sbjct: 266 IE--PWLSGVATKDG 278 >2VWT-A nrPDB Length = 267 Score = 30.0 bits (66), Expect = 1.2, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 46/120 (38%), Gaps = 13/120 (10%) Query: 126 LLETAHAFQGLPKGLTRV---SVGLPLIGTTADAEAVAEALVASLPADRKPGEPVVFMGH 182 ++ + L K + + ++ +P++ T A V A +R G Sbjct: 72 VIRPVEGSKPLIKQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPYGER---------GV 122 Query: 183 GTPHPADICYPGLQYYLWRLDPDL-LVGTVEGSPSFDNVMAELDVRKAKRVWLMPLMAVA 241 G + ++ Y+ +++ L L+ VE + DN+ LDV V++ P A Sbjct: 123 GASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADLSA 182 >1QO2-A nrPDB Length = 241 Score = 30.0 bits (66), Expect = 1.4, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 21/48 (43%) Query: 68 PDIPVRWAYTAKMIRAKLRAEGIAAPSPAEALAGMAEEGFTHVAVQSL 115 P I + A+MI+ + P E + + EEGFT + V L Sbjct: 5 PAIDLFRGKVARMIKGRKENTIFYEKDPVELVEKLIEEGFTLIHVVDL 52 >1YBF-A nrPDB Length = 268 Score = 29.6 bits (65), Expect = 1.8, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 41/108 (37%), Gaps = 24/108 (22%) Query: 146 GLPLIGTTADAEAVAEALVASLPADRKPGEPVVFMGHGTPHPADICYPGLQYYLWRLDPD 205 G+P++G S+P G ++ G G+ + A I LW + P Sbjct: 46 GVPIVGEHT-----------SMPNASAEGVTLINFGMGSANAATIM-----DLLWAIHPK 89 Query: 206 LLVGTVEGSPSFDNVMAELDVRKAKRVWLMPLMAVAGDHARNDMAGDE 253 ++ F L + A +L+P+ A+ G+ ND +E Sbjct: 90 AVI--------FLGKCGGLKLENALGDYLLPIAAIRGEGTSNDYLPEE 129 >5ED4-A nrPDB Length = 250 Score = 29.6 bits (65), Expect = 1.9, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 10/70 (14%) Query: 58 KMGDRVRAAHPDIPVRWAYTAKM----IRAKLRAEGIAAPSPAEALAGMAEEGFTHVAVQ 113 + DR R PD + M + +LRA+GI AP AL A + + Sbjct: 58 QALDRARETRPDAVILDVMMPGMDGFGVLRRLRADGIDAP----ALFLTARDSLQD-KIA 112 Query: 114 SLHTIPGEEF 123 L T+ G+++ Sbjct: 113 GL-TLGGDDY 121 >4MVT-A nrPDB Length = 374 Score = 29.2 bits (64), Expect = 2.4, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 31/85 (36%), Gaps = 19/85 (22%) Query: 52 ARPALDKMGDRVRAAHPD-----------------IPVRWAYTAKMIRAKLRAEGIAAPS 94 +RP R+ A P+ + + TA + KLRA+GI P Sbjct: 146 SRPINITPLARLSATVPNTIVVNWSSEFGRNYSLSVYLVRQLTAGTLLQKLRAKGIRNPD 205 Query: 95 PAEAL--AGMAEEGFTHVAVQSLHT 117 + AL + + + VA SL Sbjct: 206 HSRALIKEKLTADPDSEVATTSLRV 230 >4AKV-A nrPDB Length = 386 Score = 28.8 bits (63), Expect = 2.9, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 16/27 (59%) Query: 177 VVFMGHGTPHPADICYPGLQYYLWRLD 203 +++M H T HP Y G Q++L LD Sbjct: 123 ILWMDHMTSHPVLSQYEGFQHFLSCLD 149 >5VYL-A nrPDB Length = 579 Score = 28.5 bits (62), Expect = 3.5, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 18/42 (42%) Query: 160 AEALVASLPADRKPGEPVVFMGHGTPHPADICYPGLQYYLWR 201 + L+ASL R+P P +G PA + L+ + Sbjct: 30 MQRLLASLAGLRQPPTPTAETANGADDPAFLATAKLRAAMAA 71 >3LYH-A nrPDB Length = 126 Score = 28.5 bits (62), Expect = 3.7, Method: Composition-based stats. Identities = 10/35 (28%), Positives = 18/35 (51%) Query: 215 PSFDNVMAELDVRKAKRVWLMPLMAVAGDHARNDM 249 PS D ++ + ++ ++PL AG H R D+ Sbjct: 48 PSLDTIVNRAKGQGVEQFTVVPLFLAAGRHLRKDV 82 >2CY8-A nrPDB Length = 453 Score = 28.5 bits (62), Expect = 4.1, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 24/72 (33%), Gaps = 12/72 (16%) Query: 29 GHGAPKAQKTGILLVAFGTSVEEARPALDKMGDRVRAAHPDIPVRWAYTAKMIRAKLRAE 88 GHG P+ ++ G + P + +R+ AA P KLR Sbjct: 72 GHGHPRVNAAIAEALSHGVQYAASHPLEVRWAERIVAAFPS------------IRKLRFT 119 Query: 89 GIAAPSPAEALA 100 G + AL Sbjct: 120 GSGTETTLLALR 131 >4V93-A4 nrPDB Length = 145 Score = 28.5 bits (62), Expect = 4.2, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 11/65 (16%) Query: 151 GTTADAEAVAEAL----VASLPADRKPGEPVVFMGHGTPHPADICYP-----GLQYYLWR 201 G+ D EA ++A+ A +P R + V G T HPA I + GL + Sbjct: 21 GSGHDREAFSQAIWRATFAQVPESRSLFKRV--HGDDTSHPAFIAHADRVLGGLDIAIST 78 Query: 202 LDPDL 206 LD Sbjct: 79 LDQPA 83 >1U8S-A nrPDB Length = 192 Score = 28.1 bits (61), Expect = 4.6, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 36/89 (40%), Gaps = 8/89 (8%) Query: 85 LRAEGIAAPSPAEALAGMAEEGFTHVAVQSLHTIPGEEFHGLLETAHAFQGLPKGLTRVS 144 + A G P + + + ++ + S + G+EF L+ G P +TRV Sbjct: 9 ITAVGTDRPGICNEVVRLVTQAGCNI-IDSRIAMFGKEFTLLM----LISGSPSNITRVE 63 Query: 145 VGLPLIGTTADAEAVAEALVASLPADRKP 173 LPL+G D + + + P D + Sbjct: 64 TTLPLLGQQHDLITMMK---RTSPHDHQT 89 >6OIK-A nrPDB Length = 354 Score = 28.1 bits (61), Expect = 4.6, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 2/59 (3%) Query: 78 AKMIRAKLRAEGIAAPSPAEALAGMAEEGFTHVAVQSLHTIPGEEFHGLLETAHAFQGL 136 +KMI L+ +GI+A + L A E V+ + I + F G E ++ + Sbjct: 16 SKMIEKNLKEDGISAAKDVKLLLLGAGESGKSTIVKQMKIIHEDGFSG--EDVKQYKPV 72 >3DFG-A nrPDB Length = 162 Score = 28.1 bits (61), Expect = 5.4, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 19/38 (50%) Query: 72 VRWAYTAKMIRAKLRAEGIAAPSPAEALAGMAEEGFTH 109 V ++ K + KL+A GI + A+ +A EG+ Sbjct: 28 VHREHSKKELNRKLQARGIEPEAAQAAVERLAGEGWQD 65 >4UPI-A nrPDB Length = 576 Score = 27.7 bits (60), Expect = 5.8, Method: Composition-based stats. Identities = 22/77 (28%), Positives = 31/77 (40%), Gaps = 9/77 (11%) Query: 150 IGTTADAEAVAEALVASLPA-DRKPGEPVVFMGHGTPHPADICYPGLQYYLWRLDPDLLV 208 +G AE V + L ++L A R + + +D Y L L DPDL+ Sbjct: 498 LGRDPSAEEVRQRLTSALDAWHRNTRQRIT--------KSDAAYRALDPVLRESDPDLMA 549 Query: 209 GTVEGSPSFDNVMAELD 225 G + G D V AE Sbjct: 550 GVIIGYWDEDEVEAEKR 566 >4GSA-A nrPDB Length = 432 Score = 27.7 bits (60), Expect = 6.5, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 21/55 (38%) Query: 25 PAFAGHGAPKAQKTGILLVAFGTSVEEARPALDKMGDRVRAAHPDIPVRWAYTAK 79 PA GH P+ + + + GTS + + + V A P I + + Sbjct: 68 PAICGHAHPEVIEALKVAMEKGTSFGAPCALENVLAEMVNDAVPSIEMVRFVNSG 122 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.319 0.137 0.384 Lambda K H 0.267 0.0418 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 12,223,376 Number of Sequences: 36641 Number of extensions: 504014 Number of successful extensions: 1378 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 20 Number of HSP's successfully gapped in prelim test: 29 Number of HSP's that attempted gapping in prelim test: 1350 Number of HSP's gapped (non-prelim): 51 length of query: 297 length of database: 10,336,785 effective HSP length: 96 effective length of query: 201 effective length of database: 6,819,249 effective search space: 1370669049 effective search space used: 1370669049 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 59 (27.3 bits)