BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q6Z1J6 (394 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5EE0-A nrPDB 812 0.0 2OHF-A nrPDB 483 e-137 1NI3-A nrPDB 407 e-114 1JAL-A nrPDB 291 5e-79 2DBY-A nrPDB 272 2e-73 1WXQ-A nrPDB 84 1e-16 1LNZ-A nrPDB 66 3e-11 4CSU-9 nrPDB 64 2e-10 1UDX-A nrPDB 64 2e-10 5M04-A nrPDB 63 2e-10 5ZZM-A nrPDB 44 1e-04 2WJG-A nrPDB 40 0.001 4A9A-A nrPDB 40 0.002 2WJI-A nrPDB 39 0.005 1MKY-A nrPDB 38 0.009 3K53-A nrPDB 37 0.019 2QTH-A nrPDB 36 0.028 3W5J-A nrPDB 35 0.042 3A1U-A nrPDB 35 0.050 2QU8-A nrPDB 35 0.057 3A1W-A nrPDB 35 0.064 2DYK-A nrPDB 35 0.065 5DN8-A nrPDB 35 0.073 4JYC-A nrPDB 34 0.089 3J8G-X nrPDB 34 0.096 4V7F-o nrPDB 33 0.19 4R98-A nrPDB 33 0.23 3LX8-A nrPDB 33 0.27 4DCU-A nrPDB 32 0.35 1HYH-A nrPDB 32 0.44 5X4B-A nrPDB 32 0.49 2WIC-A nrPDB 32 0.53 6G12-A nrPDB 32 0.58 3GEH-A nrPDB 32 0.58 3IBY-A nrPDB 31 1.1 6N8N-W nrPDB 30 1.7 5T62-W nrPDB 30 1.7 3VSE-A nrPDB 30 2.0 2E87-A nrPDB 30 2.2 1PUJ-A nrPDB 30 2.5 5LNT-A nrPDB 29 3.1 3R9W-A nrPDB 29 3.1 2A30-A nrPDB 29 4.1 1A5Z-A nrPDB 29 4.6 4ML9-A nrPDB 28 5.9 3H2Y-A nrPDB 28 6.6 2A45-H nrPDB 28 6.8 3H32-B nrPDB 28 9.9 >5EE0-A nrPDB Length = 395 Score = 812 bits (2098), Expect = 0.0, Method: Compositional matrix adjust. Identities = 394/394 (100%), Positives = 394/394 (100%) Query: 1 MPPKASKKDAAPAERPILGRFSSHLKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTID 60 MPPKASKKDAAPAERPILGRFSSHLKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTID Sbjct: 2 MPPKASKKDAAPAERPILGRFSSHLKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTID 61 Query: 61 PNEARVYVPDERFDWLCQLYKPKSEVSAYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVD 120 PNEARVYVPDERFDWLCQLYKPKSEVSAYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVD Sbjct: 62 PNEARVYVPDERFDWLCQLYKPKSEVSAYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVD 121 Query: 121 GIFHVLRAFEDKEVTHIDDSVDPVRDLETIGEELRLKDIEFVQNKIDDLEKSMKRSNDKQ 180 GIFHVLRAFEDKEVTHIDDSVDPVRDLETIGEELRLKDIEFVQNKIDDLEKSMKRSNDKQ Sbjct: 122 GIFHVLRAFEDKEVTHIDDSVDPVRDLETIGEELRLKDIEFVQNKIDDLEKSMKRSNDKQ 181 Query: 181 LKLEHELCEKVKAHLEDGKDVRFGDWKSADIEILNTFQLLTAKPVVYLVNMSEKDYQRKK 240 LKLEHELCEKVKAHLEDGKDVRFGDWKSADIEILNTFQLLTAKPVVYLVNMSEKDYQRKK Sbjct: 182 LKLEHELCEKVKAHLEDGKDVRFGDWKSADIEILNTFQLLTAKPVVYLVNMSEKDYQRKK 241 Query: 241 NKFLPKIHAWVQEHGGETIIPFSCAFERLLADMPPDEAAKYCAENQIASVIPKIIKTGFA 300 NKFLPKIHAWVQEHGGETIIPFSCAFERLLADMPPDEAAKYCAENQIASVIPKIIKTGFA Sbjct: 242 NKFLPKIHAWVQEHGGETIIPFSCAFERLLADMPPDEAAKYCAENQIASVIPKIIKTGFA 301 Query: 301 AIHLIYFFTAGPDEVKCWQIRRQTKAPQAAGTIHTDFERGFICAEVMKFDDLKELGSESA 360 AIHLIYFFTAGPDEVKCWQIRRQTKAPQAAGTIHTDFERGFICAEVMKFDDLKELGSESA Sbjct: 302 AIHLIYFFTAGPDEVKCWQIRRQTKAPQAAGTIHTDFERGFICAEVMKFDDLKELGSESA 361 Query: 361 VKAAGKYRQEGKTYVVQDGDIIFFKFNVSGGGKK 394 VKAAGKYRQEGKTYVVQDGDIIFFKFNVSGGGKK Sbjct: 362 VKAAGKYRQEGKTYVVQDGDIIFFKFNVSGGGKK 395 >2OHF-A nrPDB Length = 396 Score = 483 bits (1244), Expect = e-137, Method: Compositional matrix adjust. Identities = 245/397 (61%), Positives = 297/397 (74%), Gaps = 5/397 (1%) Query: 1 MPPKASKKDAAPAERPILGRFSSHLKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTID 60 MPPK P PI+GRF + LKIGIVGLPNVGKSTFFN++T AENFPFCTID Sbjct: 1 MPPKKGGDGIKPP--PIIGRFGTSLKIGIVGLPNVGKSTFFNVLTNSQASAENFPFCTID 58 Query: 61 PNEARVYVPDERFDWLCQLYKPKSEVSAYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVD 120 PNE+RV VPDERFD+LCQ +KP S++ A+L + DIAGLV+GAH G+GLGNAFLSHI A D Sbjct: 59 PNESRVPVPDERFDFLCQYHKPASKIPAFLNVVDIAGLVKGAHNGQGLGNAFLSHISACD 118 Query: 121 GIFHVLRAFEDKEVTHIDDSVDPVRDLETIGEELRLKDIEFVQNKIDDLEKSMKRSNDKQ 180 GIFH+ RAFED ++TH++ SVDP+RD+E I EEL+LKD E + ID LEK R DK+ Sbjct: 119 GIFHLTRAFEDDDITHVEGSVDPIRDIEIIHEELQLKDEEMIGPIIDKLEKVAVRGGDKK 178 Query: 181 LKLEHELCEKVKAHLEDGKD-VRF-GDWKSADIEILNTFQLLTAKPVVYLVNMSEKDYQR 238 LK E+++ KVK+ + D K VRF DW +IE+LN LT+KP+VYLVN+SEKDY R Sbjct: 179 LKPEYDIMCKVKSWVIDQKKPVRFYHDWNDKEIEVLNKHLFLTSKPMVYLVNLSEKDYIR 238 Query: 239 KKNKFLPKIHAWVQEHG-GETIIPFSCAFERLLADMPPDEAAKYCAENQIASVIPKIIKT 297 KKNK+L KI WV ++ G +IPFS A E L ++ +E KY N S +PKIIK Sbjct: 239 KKNKWLIKIKEWVDKYDPGALVIPFSGALELKLQELSAEERQKYLEANMTQSALPKIIKA 298 Query: 298 GFAAIHLIYFFTAGPDEVKCWQIRRQTKAPQAAGTIHTDFERGFICAEVMKFDDLKELGS 357 GFAA+ L YFFTAGPDEV+ W IR+ TKAPQAAG IHTDFE+GFI AEVMK++D KE GS Sbjct: 299 GFAALQLEYFFTAGPDEVRAWTIRKGTKAPQAAGKIHTDFEKGFIMAEVMKYEDFKEEGS 358 Query: 358 ESAVKAAGKYRQEGKTYVVQDGDIIFFKFNVSGGGKK 394 E+AVKAAGKYRQ+G+ Y+V+DGDIIFFKFN KK Sbjct: 359 ENAVKAAGKYRQQGRNYIVEDGDIIFFKFNTPQQPKK 395 >1NI3-A nrPDB Length = 392 Score = 407 bits (1047), Expect = e-114, Method: Compositional matrix adjust. Identities = 204/393 (51%), Positives = 274/393 (69%), Gaps = 13/393 (3%) Query: 1 MPPKASKKDAAPAERPILGRFSSHLKIGIVGLPNVGKSTFFNIVTK--LSIPAENFPFCT 58 MPPK ++ + GR ++LK GIVG+PNVGKSTFF +TK L PA N+P+ T Sbjct: 1 MPPKKQQE----VVKVQWGRPGNNLKTGIVGMPNVGKSTFFRAITKSVLGNPA-NYPYAT 55 Query: 59 IDPNEARVYVPDERFDWLCQLYKPKSEVSAYLEINDIAGLVRGAHAGEGLGNAFLSHIRA 118 IDP EA+V VPDERFDWLC+ YKPKS V A+L + DIAGL +GA G GLGNAFLSH+RA Sbjct: 56 IDPEEAKVAVPDERFDWLCEAYKPKSRVPAFLTVFDIAGLTKGASTGVGLGNAFLSHVRA 115 Query: 119 VDGIFHVLRAFEDKEVTHIDDSVDPVRDLETIGEELRLKDIEFVQNKIDDLEKSMKRSND 178 VD I+ V+RAF+D E+ H++ VDP+RDL I +EL +KD EFV+ ++ L K R + Sbjct: 116 VDAIYQVVRAFDDAEIIHVEGDVDPIRDLSIIVDELLIKDAEFVEKHLEGLRKITSRGAN 175 Query: 179 ----KQLKLEHELCEKVKAHLEDGKD-VRFGDWKSADIEILNTFQLLTAKPVVYLVNMSE 233 K K E + EKV +L + K +R GDW + ++EI+N+ LLTAKPV+YLVNMSE Sbjct: 176 TLEMKAKKEEQAIIEKVYQYLTETKQPIRKGDWSNREVEIINSLYLLTAKPVIYLVNMSE 235 Query: 234 KDYQRKKNKFLPKIHAWVQEHG-GETIIPFSCAFERLLADMPPDEAAKYCAENQIASVIP 292 +D+ R+KNK+LPKI W+ E+ G+T+IP S AFE L + +EA + C + S++P Sbjct: 236 RDFLRQKNKYLPKIKKWIDENSPGDTLIPMSVAFEERLTNFTEEEAIEECKKLNTKSMLP 295 Query: 293 KIIKTGFAAIHLIYFFTAGPDEVKCWQIRRQTKAPQAAGTIHTDFERGFICAEVMKFDDL 352 KII TG+ A++LI +FT G DEV+ W IR+ TKAPQAAG IHTDFE+ F+ E+M + DL Sbjct: 296 KIIVTGYNALNLINYFTCGEDEVRSWTIRKGTKAPQAAGVIHTDFEKAFVVGEIMHYQDL 355 Query: 353 KELGSESAVKAAGKYRQEGKTYVVQDGDIIFFK 385 + +E+A +AAGKY +GK YV++ GDI +K Sbjct: 356 FDYKTENACRAAGKYLTKGKEYVMESGDIAHWK 388 >1JAL-A nrPDB Length = 363 Score = 291 bits (744), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 147/365 (40%), Positives = 223/365 (61%), Gaps = 5/365 (1%) Query: 25 LKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPDERFDWLCQLYKPKS 84 K GIVGLPNVGKST FN +TK I A N+PFCTI+PN V +PD R D L ++ KP+ Sbjct: 3 FKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKPER 62 Query: 85 EVSAYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVDGIFHVLRAFEDKEVTHIDDSVDPV 144 + +E DIAGLV GA GEGLGN FL++IR D I HV+R FE+ ++ H+ +DP+ Sbjct: 63 ILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKIDPL 122 Query: 145 RDLETIGEELRLKDIEFVQNKIDDLEKSMKRSNDKQLKLEHELCEKVKAHLEDGKDVRFG 204 D++TI EL L D++ + I L+K K DK+ K E + EK+ LE+ +R Sbjct: 123 DDIDTINTELALADLDSCERAIQRLQKRAK-GGDKEAKFELSVMEKILPVLENAGMIRSV 181 Query: 205 DWKSADIEILNTFQLLTAKPVVYLVNMSEKDYQRKKNKFLPKIHAWVQEHGGETIIPFSC 264 +++ + ++ LT KP +Y+ N++E ++ N +L ++ + G ++P Sbjct: 182 GLDKEELQAIKSYNFLTLKPTMYIANVNEDGFE--NNPYLDRVREIAAKEGA-VVVPVCA 238 Query: 265 AFERLLADMPPDEAAKYCAENQIASV-IPKIIKTGFAAIHLIYFFTAGPDEVKCWQIRRQ 323 A E +A++ +E ++ + I + ++I+ G+A ++L +FTAG EV+ W + Sbjct: 239 AIESEIAELDDEEKVEFLQDLGIEEPGLNRVIRAGYALLNLQTYFTAGVKEVRAWTVSVG 298 Query: 324 TKAPQAAGTIHTDFERGFICAEVMKFDDLKELGSESAVKAAGKYRQEGKTYVVQDGDIIF 383 AP+AA IHTDFE+GFI AEV+ ++D + E+ K AGK+R EGK Y+VQDGD++ Sbjct: 299 ATAPKAAAVIHTDFEKGFIRAEVIAYEDFIQFNGENGAKEAGKWRLEGKDYIVQDGDVMH 358 Query: 384 FKFNV 388 F+FNV Sbjct: 359 FRFNV 363 >2DBY-A nrPDB Length = 368 Score = 272 bits (695), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 159/370 (42%), Positives = 219/370 (59%), Gaps = 11/370 (2%) Query: 25 LKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPDERFDWLCQLYKPKS 84 L +GIVGLPNVGKST FN +T+ + A N+PF TID N V + DER L + + K Sbjct: 2 LAVGIVGLPNVGKSTLFNALTRANALAANYPFATIDKNVGVVPLEDERLYALQRTFA-KG 60 Query: 85 E-----VSAYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVDGIFHVLRAFEDKEVTHIDD 139 E V ++E DIAGLV+GAH GEGLGN FL+HIR V I HVLR F D +V H+ Sbjct: 61 ERVPPVVPTHVEFVDIAGLVKGAHKGEGLGNQFLAHIREVAAIAHVLRCFPDPDVVHVMG 120 Query: 140 SVDPVRDLETIGEELRLKDIEFVQNKIDDLEKSMKRSNDKQLKLEHELCEKVKAHLEDGK 199 VDP+ D E + EL L D+ ++ +++ L K R++ ++L L E E + HL++GK Sbjct: 121 RVDPLEDAEVVETELLLADLATLERRLERLRKE-ARADRERLPL-LEAAEGLYVHLQEGK 178 Query: 200 DVRFGDWKSADIEILNTFQLLTAKPVVYLVNMSEKDY-QRKKNKFLPKIHAWVQEHGGET 258 R A L LLTAKPV+Y+ N++E+D + N + + E G E Sbjct: 179 PARTFPPSEAVARFLKETPLLTAKPVIYVANVAEEDLPDGRGNPQVEAVRRKALEEGAEV 238 Query: 259 IIPFSCAFERLLADMPPDEAAKYCAENQIA-SVIPKIIKTGFAAIHLIYFFTAGPDEVKC 317 ++ S E LA++ +EA + A + S + ++ + G+ A+ L+ FFTAG EV+ Sbjct: 239 VV-VSARLEAELAELSGEEARELLAAYGLQESGLQRLARAGYRALDLLTFFTAGEKEVRA 297 Query: 318 WQIRRQTKAPQAAGTIHTDFERGFICAEVMKFDDLKELGSESAVKAAGKYRQEGKTYVVQ 377 W +RR TKAP+AAG IH+D ERGFI AEV+ +D L E G + K G R EGK Y VQ Sbjct: 298 WTVRRGTKAPRAAGEIHSDMERGFIRAEVIPWDKLVEAGGWARAKERGWVRLEGKDYEVQ 357 Query: 378 DGDIIFFKFN 387 DGD+I+ FN Sbjct: 358 DGDVIYVLFN 367 >1WXQ-A nrPDB Length = 397 Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 77/266 (28%), Positives = 120/266 (45%), Gaps = 29/266 (10%) Query: 25 LKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVY-VPDERFDWL-C----Q 78 ++IG+VG PNVGKSTFF+ T + + N+PF TI+ N Y + D L C Q Sbjct: 1 MEIGVVGKPNVGKSTFFSAATLVDVEIANYPFTTIEANVGVTYAITDHPCKELGCSPNPQ 60 Query: 79 LYKPKSEVSAY-LEINDIAGLVRGAHAGEGLGNAFLSHIRAVDGIFHVLRAF--EDKEVT 135 Y+ ++ ++ +++ D+AGLV GAH G GLGN FL +R + HV+ A D E Sbjct: 61 NYEYRNGLALIPVKMVDVAGLVPGAHEGRGLGNKFLDDLRMASALIHVVDATGKTDPE-G 119 Query: 136 HIDDSVDPVRDLETIGEELRLKDIEFVQNKIDDLEKSMKRSNDKQLKLEHELCEKVKAHL 195 D DPV D+E + E+ + D K +K +++KLE + E + Sbjct: 120 QPTDYHDPVEDIEFLEREIDYWIYGILSKGWDKFAKRIKL---QKIKLESAIAEHLSGIG 176 Query: 196 EDGKDVRFG-----------DWKSADIEILNTFQLLTAKPVVYLVNMSEKDYQRKKNKFL 244 + DV W D+ + KP+V N ++ + + + Sbjct: 177 VNENDVWEAMHKLNLPEDPTKWSQDDLLAFASEIRRVNKPMVIAANKADAASDEQIKRLV 236 Query: 245 PKIHAWVQEHGGETIIPFSCAFERLL 270 + +E G +IP S A E L Sbjct: 237 RE-----EEKRGYIVIPTSAAAELTL 257 >1LNZ-A nrPDB Length = 342 Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 54/174 (31%), Positives = 75/174 (43%), Gaps = 34/174 (19%) Query: 3 PKASKKDAAPAERPILGRFSSHLKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPN 62 P+ S+ ER I+ +G+VG P+VGKST ++V+ ++ F T+ PN Sbjct: 137 PQLSENGEPGKERYIVLELKVLADVGLVGFPSVGKSTLLSVVSSAKPKIADYHFTTLVPN 196 Query: 63 EARVYVPDERFDWLCQLYKPKSEVSAYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVDGI 122 V D R S V A D+ GL+ GAH G GLG+ FL HI I Sbjct: 197 LGMVETDDGR-----------SFVMA-----DLPGLIEGAHQGVGLGHQFLRHIERTRVI 240 Query: 123 FHV--LRAFEDKEVTHIDDSVDPVRDLETIGEELRLKDIEF-------VQNKID 167 HV + E + DP D TI +EL ++ V NK+D Sbjct: 241 VHVIDMSGLEGR---------DPYDDYLTINQELSEYNLRLTERPQIIVANKMD 285 >4CSU-9 nrPDB Length = 390 Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 51/154 (33%), Positives = 71/154 (46%), Gaps = 34/154 (22%) Query: 27 IGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPDERFDWLCQLYKPKSEV 86 +G++G+PN GKSTF V+ ++PF T+ P+ V + +E KS V Sbjct: 162 VGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNE-----------KSFV 210 Query: 87 SAYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVDGIFHVLRAFEDKEVTHID--DSVDPV 144 A DI GL+ GA G GLG FL H+ + H++ ID D DPV Sbjct: 211 VA-----DIPGLIEGAAEGAGLGIRFLKHLERCRVLLHLI---------DIDPIDGTDPV 256 Query: 145 RD-------LETIGEELRLKDIEFVQNKIDDLEK 171 + LE ++L K V NKID L+K Sbjct: 257 ENARIIISELEKYSQDLATKPRWLVFNKIDLLDK 290 >1UDX-A nrPDB Length = 416 Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 36/153 (23%) Query: 27 IGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVP-DERFDWLCQLYKPKSE 85 +G+VG PN GKS+ +T+ +PF T+ PN V V +ERF Sbjct: 160 VGLVGYPNAGKSSLLAAMTRAHPKIAPYPFTTLSPNLGVVEVSEEERFT----------- 208 Query: 86 VSAYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVDGIFHVLRAFEDKEVTHIDDSVDPVR 145 + DI G++ GA G+GLG FL HI + +VL D + +P++ Sbjct: 209 ------LADIPGIIEGASEGKGLGLEFLRHIARTRVLLYVL-----------DAADEPLK 251 Query: 146 DLETIGEELRLKDIEFVQ-------NKIDDLEK 171 LET+ +E+ D ++ NK+D LE+ Sbjct: 252 TLETLRKEVGAYDPALLRRPSLVALNKVDLLEE 284 >5M04-A nrPDB Length = 360 Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 16/145 (11%) Query: 27 IGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPDERFDWLCQLYKPKSEV 86 +G++G+PN GKSTF V+ ++PF T+ P+ V + +E KS V Sbjct: 182 VGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNE-----------KSFV 230 Query: 87 SAYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVDGIFHVLRAFEDKEVTHIDDSVDPVRD 146 A DI GL+ GA G GLG FL H+ + H++ ++++ + + Sbjct: 231 VA-----DIPGLIEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISE 285 Query: 147 LETIGEELRLKDIEFVQNKIDDLEK 171 LE ++L K V NKID L+K Sbjct: 286 LEKYSQDLATKPRWLVFNKIDLLDK 310 >5ZZM-A nrPDB Length = 426 Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 42/149 (28%), Positives = 63/149 (42%), Gaps = 30/149 (20%) Query: 27 IGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPDERFDWLCQLYKPKSEV 86 + +VG N GKST FN +T+ + A + F T+DP R+ V D Sbjct: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVAD---------------- 243 Query: 87 SAYLEINDIAGLVRGAHAGEGLGNAF---LSHIRAVDGIFHVLRAFEDKEVTHIDDSVDP 143 + D G +R H L AF L R + HV+ A + + ++++ Sbjct: 244 VGETVLADTVGFIR--HLPHDLVAAFKATLQETRQATLLLHVIDAAD----VRVQENIEA 297 Query: 144 VRDLETIGEELRLKDIE--FVQNKIDDLE 170 V T+ EE+ +I V NKID LE Sbjct: 298 V---NTVLEEIDAHEIPTLLVMNKIDMLE 323 >2WJG-A nrPDB Length = 188 Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%) Query: 23 SHLK---IGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPDERF 73 SH+K I ++G PNVGKST FN +T ++ N+P T++ E E+F Sbjct: 3 SHMKSYEIALIGNPNVGKSTIFNALTGENVYIGNWPGVTVEKKEGEFEYNGEKF 56 >4A9A-A nrPDB Length = 376 Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 17/100 (17%) Query: 27 IGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPDERFDWLCQLYKPKSEV 86 +G VG P+VGKST + +T A + F T+ V VP YK Sbjct: 75 VGFVGFPSVGKSTLLSKLTGTESEAAEYEFTTL------VTVPG------VIRYK----- 117 Query: 87 SAYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVDGIFHVL 126 A +++ D+ G++ GA G G G ++ R + +F +L Sbjct: 118 GAKIQMLDLPGIIDGAKDGRGRGKQVIAVARTCNLLFIIL 157 >2WJI-A nrPDB Length = 165 Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 28/48 (58%) Query: 26 KIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPDERF 73 +I ++G PNVGKST FN +T ++ N+P T++ E E+F Sbjct: 5 EIALIGNPNVGKSTIFNALTGENVYIGNWPGVTVEKKEGEFEYNGEKF 52 >1MKY-A nrPDB Length = 439 Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 44/102 (43%), Gaps = 19/102 (18%) Query: 22 SSHLKIGIVGLPNVGKSTFFN-IVTKLSIPAENFPFCTIDPNEARVYVPDERFDWLCQLY 80 + +K+ IVG PNVGKST FN I+ K P T DP + V++ ++ ++ Sbjct: 178 TDAIKVAIVGRPNVGKSTLFNAILNKERALVSPIPGTTRDPVDDEVFIDGRKYVFV---- 233 Query: 81 KPKSEVSAYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVDGI 122 D AGL R + + S+ R VD I Sbjct: 234 -------------DTAGLRRKSRVEPRTVEKY-SNYRVVDSI 261 Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust. Identities = 28/99 (28%), Positives = 40/99 (40%), Gaps = 16/99 (16%) Query: 29 IVGLPNVGKSTFFN-IVTKLSIPAENFPFCTIDPNEARVYVPDERFDWLCQLYKPKSEVS 87 IVG PNVGKST FN +V K E+ T DP + V +W + +K Sbjct: 6 IVGRPNVGKSTLFNKLVKKKKAIVEDEEGVTRDPVQDTV-------EWYGKTFKLVDTCG 58 Query: 88 AYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVDGIFHVL 126 + DI + + L+ IR D + V+ Sbjct: 59 VFDNPQDI--------ISQKMKEVTLNMIREADLVLFVV 89 >3K53-A nrPDB Length = 271 Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust. Identities = 16/38 (42%), Positives = 23/38 (60%) Query: 27 IGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEA 64 + +VG PNVGK+T FN +T L N+P T++ E Sbjct: 6 VALVGNPNVGKTTIFNALTGLRQHVGNWPGVTVEKKEG 43 >2QTH-A nrPDB Length = 364 Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 68/166 (40%), Gaps = 29/166 (17%) Query: 27 IGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPDERFDWLCQLYKPKSEV 86 IGIVG N GK++ FN +T L+ + F T+ P + + + + + Sbjct: 182 IGIVGYTNSGKTSLFNSLTGLTQKVDTKLFTTMSPKRYAIPINNRKIMLV---------- 231 Query: 87 SAYLEINDIAGLVRGAHAGEGLGNAF---LSHIRAVDGIFHVLRAF--EDKEVTHIDDSV 141 D G +RG + +AF LS + D + V+ + E+ + + S Sbjct: 232 -------DTVGFIRGIPP--QIVDAFFVTLSEAKYSDALILVIDSTFSENLLIETLQSSF 282 Query: 142 DPVRDLETIGEELRLKDIEFVQNKIDDLEKSMKRSNDKQLKLEHEL 187 + +R++ G K I NKID + + + D KL EL Sbjct: 283 EILREIGVSG-----KPILVTLNKIDKINGDLYKKLDLVEKLSKEL 323 >3W5J-A nrPDB Length = 204 Score = 35.4 bits (80), Expect = 0.042, Method: Compositional matrix adjust. Identities = 14/35 (40%), Positives = 23/35 (65%) Query: 26 KIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTID 60 +I ++G+PN GKST FN +T + N+P T++ Sbjct: 5 RIALLGMPNTGKSTLFNRMTGGAARVGNWPGITVE 39 >3A1U-A nrPDB Length = 258 Score = 35.0 bits (79), Expect = 0.050, Method: Compositional matrix adjust. Identities = 14/40 (35%), Positives = 23/40 (57%) Query: 25 LKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEA 64 +K+ + G PNVGK++ FN +T N+P T++ E Sbjct: 6 VKVALAGCPNVGKTSLFNALTGTKQYVANWPGVTVEKKEG 45 >2QU8-A nrPDB Length = 228 Score = 35.0 bits (79), Expect = 0.057, Method: Compositional matrix adjust. Identities = 14/32 (43%), Positives = 23/32 (71%) Query: 27 IGIVGLPNVGKSTFFNIVTKLSIPAENFPFCT 58 I + G PNVGKS+F NIV++ ++ +++ F T Sbjct: 32 IILSGAPNVGKSSFMNIVSRANVDVQSYSFTT 63 >3A1W-A nrPDB Length = 168 Score = 35.0 bits (79), Expect = 0.064, Method: Compositional matrix adjust. Identities = 14/40 (35%), Positives = 23/40 (57%) Query: 25 LKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEA 64 +K+ + G PNVGK++ FN +T N+P T++ E Sbjct: 6 VKVALAGCPNVGKTSLFNALTGTKQYVANWPGVTVEKKEG 45 >2DYK-A nrPDB Length = 161 Score = 34.7 bits (78), Expect = 0.065, Method: Compositional matrix adjust. Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 26 KIGIVGLPNVGKSTFFN-IVTKLSIPAENFPFCTIDPNEARVYVPDERF 73 K+ IVG PNVGKS+ FN ++ K S + P T D E V RF Sbjct: 3 KVVIVGRPNVGKSSLFNRLLKKRSAVVADVPGVTRDLKEGVVETDRGRF 51 >5DN8-A nrPDB Length = 446 Score = 34.7 bits (78), Expect = 0.073, Method: Compositional matrix adjust. Identities = 15/20 (75%), Positives = 16/20 (80%) Query: 27 IGIVGLPNVGKSTFFNIVTK 46 I IVG PNVGKST FN +TK Sbjct: 8 IAIVGRPNVGKSTLFNYLTK 27 Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust. Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 10/88 (11%) Query: 25 LKIGIVGLPNVGKSTFFN-IVTKLSIPAENFPFCTIDPNEARVYVPDERFDWLCQL---- 79 +KI ++G PNVGKST N ++ + + + P T D +Y+P R D L Sbjct: 179 IKIAMIGRPNVGKSTLINRLLGEERVIVYDQPGTTRDS----IYIPFARNDENYTLIDTA 234 Query: 80 -YKPKSEVSAYLEINDIAGLVRGAHAGE 106 + ++++ Y+E + ++ HA + Sbjct: 235 GIRRRAKIQDYVEKFSMIKSLQAMHAAD 262 >4JYC-A nrPDB Length = 337 Score = 34.3 bits (77), Expect = 0.089, Method: Compositional matrix adjust. Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 4/64 (6%) Query: 4 KASKKDAAPAERPILGRFSSHLKIGIVGLPNVGKSTFFNIV-TKLSIPAENFPFCTIDPN 62 +A+ +D A P GR +++GI G+P VGKST + + + L+ +DP+ Sbjct: 38 RAAVRDLIDAVLPQTGRA---IRVGITGVPGVGKSTTIDALGSLLTAAGHKVAVLAVDPS 94 Query: 63 EARV 66 R Sbjct: 95 STRT 98 >3J8G-X nrPDB Length = 490 Score = 34.3 bits (77), Expect = 0.096, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 5/49 (10%) Query: 25 LKIGIVGLPNVGKSTFFN-IVTKLSIPAENFPFCTIDPNEARVYVPDER 72 +K+ IVG PNVGKST N I+ + + + P T D +Y+P ER Sbjct: 203 IKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRDS----IYIPMER 247 Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Query: 27 IGIVGLPNVGKSTFFNIVTKL-SIPAENFPFCTIDPNEARVYVPDERF 73 + +VG PNVGKST FN +T+ +FP T D R + F Sbjct: 5 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREF 52 >4V7F-o nrPDB Length = 647 Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust. Identities = 13/30 (43%), Positives = 18/30 (60%) Query: 29 IVGLPNVGKSTFFNIVTKLSIPAENFPFCT 58 I G PNVGKS+F +TK + + + F T Sbjct: 172 ICGYPNVGKSSFLRCITKSDVDVQPYAFTT 201 >4R98-A nrPDB Length = 271 Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust. Identities = 16/49 (32%), Positives = 25/49 (51%) Query: 25 LKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPDERF 73 L IG++G PN GK+T FN +T N+ T++ E + D + Sbjct: 4 LTIGLIGNPNSGKTTLFNQLTGSRQRVGNWAGVTVERKEGQFSTTDHQV 52 >3LX8-A nrPDB Length = 272 Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust. Identities = 13/38 (34%), Positives = 24/38 (63%) Query: 23 SHLKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTID 60 S +I ++G PN GK++ FN++T + N+P T++ Sbjct: 2 SMTEIALIGNPNSGKTSLFNLITGHNQRVGNWPGVTVE 39 >4DCU-A nrPDB Length = 456 Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 7/51 (13%) Query: 27 IGIVGLPNVGKSTFFNIVT--KLSIPAENFPFCTIDPNEARVYVPDERFDW 75 + IVG PNVGKST FN + ++SI E+ P T D R+Y E ++ Sbjct: 26 VAIVGRPNVGKSTIFNRIAGERISI-VEDTPGVTRD----RIYSSAEWLNY 71 >1HYH-A nrPDB Length = 309 Score = 32.0 bits (71), Expect = 0.44, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 10/86 (11%) Query: 26 KIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPDERF-DWLCQLYKPKS 84 KIGI+GL NVG + ++ + A+++ F ID NEA+V F D + L Sbjct: 3 KIGIIGLGNVGAAVAHGLIAQG--VADDYVF--IDANEAKVKADQIDFQDAMANL----- 53 Query: 85 EVSAYLEINDIAGLVRGAHAGEGLGN 110 E + IND A L LGN Sbjct: 54 EAHGNIVINDWAALADADVVISTLGN 79 >5X4B-A nrPDB Length = 162 Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 7/51 (13%) Query: 27 IGIVGLPNVGKSTFFNIVT--KLSIPAENFPFCTIDPNEARVYVPDERFDW 75 + IVG PNVGKST FN + ++SI E+ P T D R+Y E ++ Sbjct: 5 VAIVGRPNVGKSTIFNRIAGERISI-VEDTPGVTRD----RIYSSAEWLNY 50 >2WIC-A nrPDB Length = 267 Score = 32.0 bits (71), Expect = 0.53, Method: Compositional matrix adjust. Identities = 14/39 (35%), Positives = 22/39 (56%) Query: 25 LKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNE 63 L +G++G PN GK+T FN +T N+ T++ E Sbjct: 4 LTVGLIGNPNSGKTTLFNQLTGARQRVGNWAGVTVERKE 42 >6G12-A nrPDB Length = 301 Score = 31.6 bits (70), Expect = 0.58, Method: Compositional matrix adjust. Identities = 14/21 (66%), Positives = 16/21 (76%) Query: 29 IVGLPNVGKSTFFNIVTKLSI 49 IVG+PNVGKST N + K SI Sbjct: 132 IVGIPNVGKSTLINKLAKRSI 152 >3GEH-A nrPDB Length = 462 Score = 31.6 bits (70), Expect = 0.58, Method: Compositional matrix adjust. Identities = 12/22 (54%), Positives = 15/22 (68%) Query: 21 FSSHLKIGIVGLPNVGKSTFFN 42 + LK+ IVG PNVGKS+ N Sbjct: 221 LRTGLKVAIVGRPNVGKSSLLN 242 >3IBY-A nrPDB Length = 256 Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust. Identities = 12/32 (37%), Positives = 20/32 (62%) Query: 29 IVGLPNVGKSTFFNIVTKLSIPAENFPFCTID 60 ++G PN GK+T FN +T + N+P T++ Sbjct: 6 LIGNPNCGKTTLFNALTNANQRVGNWPGVTVE 37 >6N8N-W nrPDB Length = 640 Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust. Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 6/41 (14%) Query: 25 LKIGIVGLPNVGKSTFFNI------VTKLSIPAENFPFCTI 59 + IG+VG PNVGKS+ N V+ S P + F TI Sbjct: 337 INIGLVGYPNVGKSSTINSLVGAKKVSVSSTPGKTKHFQTI 377 >5T62-W nrPDB Length = 651 Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust. Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 6/41 (14%) Query: 25 LKIGIVGLPNVGKSTFFNI------VTKLSIPAENFPFCTI 59 + IG+VG PNVGKS+ N V+ S P + F TI Sbjct: 337 INIGLVGYPNVGKSSTINSLVGAKKVSVSSTPGKTKHFQTI 377 >3VSE-A nrPDB Length = 398 Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust. Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 2/63 (3%) Query: 14 ERPILGRFSSHLKIGIVGLPNVGKSTFFNIVTK-LSIPAENFPFCTIDPNEARVYVPDER 72 ER +L FS ++ +T ++ + S+ ENF IDP +YV D Sbjct: 215 ERHVLNLFSYTGAFSVIAASEASSTTSVDLANRSRSLTEENFGLNAIDPKSQYIYVMD-T 273 Query: 73 FDW 75 FD+ Sbjct: 274 FDF 276 >2E87-A nrPDB Length = 357 Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust. Identities = 13/32 (40%), Positives = 17/32 (53%) Query: 27 IGIVGLPNVGKSTFFNIVTKLSIPAENFPFCT 58 + I G PNVGKST +T ++PF T Sbjct: 170 VVIAGHPNVGKSTLLKALTTAKPEIASYPFTT 201 >1PUJ-A nrPDB Length = 282 Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust. Identities = 12/21 (57%), Positives = 16/21 (76%) Query: 29 IVGLPNVGKSTFFNIVTKLSI 49 I+G+PNVGKST N + K +I Sbjct: 125 IIGIPNVGKSTLINRLAKKNI 145 >5LNT-A nrPDB Length = 316 Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 4/82 (4%) Query: 88 AYLEINDIAGLVRGAHAGEGLGNAF--LSHIRAVDGIFHVLRAFEDKEVTHIDDSVDPVR 145 A I + A ++R G GN + H+R+V+G +LR+ +D EV + Sbjct: 152 ALRRIREGAAMIR-TRGEAGTGNVVEAVRHVRSVNGAIRLLRSMDDDEVFTYAKKIAAPY 210 Query: 146 DLETIGEEL-RLKDIEFVQNKI 166 DL +EL RL ++F + Sbjct: 211 DLVVQTKELGRLPVVQFAAGGV 232 >3R9W-A nrPDB Length = 307 Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust. Identities = 15/25 (60%), Positives = 18/25 (72%), Gaps = 2/25 (8%) Query: 27 IGIVGLPNVGKSTFFN--IVTKLSI 49 + IVG PNVGKST N + TK+SI Sbjct: 12 VAIVGKPNVGKSTLLNNLLGTKVSI 36 Score = 27.7 bits (60), Expect = 8.4, Method: Compositional matrix adjust. Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 8/88 (9%) Query: 183 LEHELCEKVKAHLEDGKDVRFG-----DWKSADIEILNTFQLLTAKPVVYLVNMSEKDYQ 237 L H + E K LE+ + F W+ D EI F KPV+ ++N +K Sbjct: 77 LGHSMVEIAKQSLEEADVILFMIDATEGWRPRDEEIYQNFIKPLNKPVIVVINKIDKIGP 136 Query: 238 RKKNKFLPKIHAWVQEHGGET-IIPFSC 264 K LP I ++H T I+P S Sbjct: 137 AK--NVLPLIDEIHKKHPELTEIVPISA 162 >2A30-A nrPDB Length = 248 Score = 28.9 bits (63), Expect = 4.1, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 7/72 (9%) Query: 26 KIGIVGLPNVGKSTFFNIVTKLSIPAENFP-----FCTIDPNEA--RVYVPDERFDWLCQ 78 KI I G GKSTF NI+ +L E P +C + +Y ER+ + Q Sbjct: 26 KISIEGNIAAGKSTFVNILKQLCEDWEVVPEPVARWCNVQSTNVLQMMYEKPERWSFTFQ 85 Query: 79 LYKPKSEVSAYL 90 Y S + A L Sbjct: 86 TYACLSRIRAQL 97 >1A5Z-A nrPDB Length = 319 Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust. Identities = 13/22 (59%), Positives = 16/22 (72%) Query: 25 LKIGIVGLPNVGKSTFFNIVTK 46 +KIGIVGL VG ST F ++ K Sbjct: 1 MKIGIVGLGRVGSSTAFALLMK 22 >4ML9-A nrPDB Length = 286 Score = 28.5 bits (62), Expect = 5.9, Method: Compositional matrix adjust. Identities = 12/26 (46%), Positives = 18/26 (69%) Query: 235 DYQRKKNKFLPKIHAWVQEHGGETII 260 D ++K+ K L K+ V+EHGG TI+ Sbjct: 8 DSEQKRRKALKKVLDAVEEHGGTTIL 33 >3H2Y-A nrPDB Length = 368 Score = 28.1 bits (61), Expect = 6.6, Method: Compositional matrix adjust. Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 7/39 (17%) Query: 29 IVGLPNVGKSTFFN-IVTKLSIPAEN------FPFCTID 60 +VG NVGKSTF N ++ + S EN FP T+D Sbjct: 165 VVGCTNVGKSTFINRMIKEFSDETENVITTSHFPGTTLD 203 >2A45-H nrPDB Length = 91 Score = 28.1 bits (61), Expect = 6.8, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 19/36 (52%) Query: 308 FTAGPDEVKCWQIRRQTKAPQAAGTIHTDFERGFIC 343 + A P + Q + + KAP A G +H D + G +C Sbjct: 27 YRARPAKAAATQKKVERKAPDAGGCLHADPDLGVLC 62 >3H32-B nrPDB Length = 458 Score = 27.7 bits (60), Expect = 9.9, Method: Compositional matrix adjust. Identities = 12/36 (33%), Positives = 19/36 (52%) Query: 308 FTAGPDEVKCWQIRRQTKAPQAAGTIHTDFERGFIC 343 + A P + Q + + KAP A G +H D + G +C Sbjct: 41 YRARPAKAAATQKKVERKAPDAGGCLHADPDLGVLC 76 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5EE0-A nrPDB 607 e-174 2OHF-A nrPDB 575 e-164 1NI3-A nrPDB 517 e-147 1JAL-A nrPDB 489 e-139 2DBY-A nrPDB 454 e-128 1WXQ-A nrPDB 257 8e-69 5M04-A nrPDB 174 4e-44 4CSU-9 nrPDB 172 2e-43 1LNZ-A nrPDB 163 1e-40 1UDX-A nrPDB 144 5e-35 5ZZM-A nrPDB 109 3e-24 2WJG-A nrPDB 71 8e-13 Sequences not found previously or not previously below threshold: 4A9A-A nrPDB 76 4e-14 2WJI-A nrPDB 70 2e-12 3K53-A nrPDB 69 4e-12 3A1U-A nrPDB 59 4e-09 3A1W-A nrPDB 59 4e-09 2E87-A nrPDB 58 8e-09 2QTH-A nrPDB 58 8e-09 2WIC-A nrPDB 57 1e-08 3IBY-A nrPDB 56 2e-08 3J8G-X nrPDB 56 3e-08 4R98-A nrPDB 55 4e-08 1MKY-A nrPDB 54 7e-08 3GEH-A nrPDB 54 1e-07 3LX8-A nrPDB 53 2e-07 3W5J-A nrPDB 51 1e-06 1XZP-A nrPDB 49 3e-06 5DN8-A nrPDB 48 6e-06 3R9W-A nrPDB 47 9e-06 2DYK-A nrPDB 47 1e-05 2QU8-A nrPDB 46 3e-05 4V7F-o nrPDB 45 7e-05 1WF3-A nrPDB 44 1e-04 2GJ9-A nrPDB 44 1e-04 4DCU-A nrPDB 42 3e-04 5X4B-A nrPDB 42 5e-04 5KH0-A nrPDB 41 7e-04 5LAD-A nrPDB 41 0.001 3GEE-A nrPDB 38 0.006 3IEU-A nrPDB 37 0.014 3H2Y-A nrPDB 37 0.015 5T62-W nrPDB 36 0.021 6N8N-W nrPDB 36 0.022 3EC1-A nrPDB 36 0.027 3CNO-A nrPDB 36 0.031 1PUJ-A nrPDB 36 0.035 2IF2-A nrPDB 36 0.035 6N8J-m nrPDB 35 0.067 5CER-A nrPDB 34 0.094 6G12-A nrPDB 34 0.095 6FT6-s nrPDB 34 0.095 5UCV-A nrPDB 34 0.14 3T5D-A nrPDB 32 0.38 4A2I-V nrPDB 32 0.47 4BAS-A nrPDB 32 0.49 5AR1-A nrPDB 32 0.61 5DE3-A nrPDB 32 0.62 6QUZ-A nrPDB 31 0.86 5U04-A nrPDB 31 0.87 2QAG-C nrPDB 31 0.94 4LV5-B nrPDB 31 1.0 2QJL-A nrPDB 31 1.0 3NXS-A nrPDB 31 1.0 5LZD-z nrPDB 31 1.1 4Q7K-A nrPDB 31 1.1 2P67-A nrPDB 31 1.1 5E9H-A nrPDB 31 1.4 2CXX-A nrPDB 30 1.6 4FIN-A nrPDB 30 1.7 4EEC-A nrPDB 30 1.7 4JYC-A nrPDB 30 1.8 4MKI-B nrPDB 30 1.9 3NIP-A nrPDB 30 1.9 6CUM-A nrPDB 30 2.1 3GP8-A nrPDB 30 2.3 1IY1-A nrPDB 30 2.5 2DHR-A nrPDB 29 2.6 3PR1-A nrPDB 29 3.1 3UGV-A nrPDB 29 3.9 1TWI-A nrPDB 29 4.7 5W76-A nrPDB 28 6.1 >5EE0-A nrPDB Length = 395 Score = 607 bits (1565), Expect = e-174, Method: Composition-based stats. Identities = 394/394 (100%), Positives = 394/394 (100%) Query: 1 MPPKASKKDAAPAERPILGRFSSHLKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTID 60 MPPKASKKDAAPAERPILGRFSSHLKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTID Sbjct: 2 MPPKASKKDAAPAERPILGRFSSHLKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTID 61 Query: 61 PNEARVYVPDERFDWLCQLYKPKSEVSAYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVD 120 PNEARVYVPDERFDWLCQLYKPKSEVSAYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVD Sbjct: 62 PNEARVYVPDERFDWLCQLYKPKSEVSAYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVD 121 Query: 121 GIFHVLRAFEDKEVTHIDDSVDPVRDLETIGEELRLKDIEFVQNKIDDLEKSMKRSNDKQ 180 GIFHVLRAFEDKEVTHIDDSVDPVRDLETIGEELRLKDIEFVQNKIDDLEKSMKRSNDKQ Sbjct: 122 GIFHVLRAFEDKEVTHIDDSVDPVRDLETIGEELRLKDIEFVQNKIDDLEKSMKRSNDKQ 181 Query: 181 LKLEHELCEKVKAHLEDGKDVRFGDWKSADIEILNTFQLLTAKPVVYLVNMSEKDYQRKK 240 LKLEHELCEKVKAHLEDGKDVRFGDWKSADIEILNTFQLLTAKPVVYLVNMSEKDYQRKK Sbjct: 182 LKLEHELCEKVKAHLEDGKDVRFGDWKSADIEILNTFQLLTAKPVVYLVNMSEKDYQRKK 241 Query: 241 NKFLPKIHAWVQEHGGETIIPFSCAFERLLADMPPDEAAKYCAENQIASVIPKIIKTGFA 300 NKFLPKIHAWVQEHGGETIIPFSCAFERLLADMPPDEAAKYCAENQIASVIPKIIKTGFA Sbjct: 242 NKFLPKIHAWVQEHGGETIIPFSCAFERLLADMPPDEAAKYCAENQIASVIPKIIKTGFA 301 Query: 301 AIHLIYFFTAGPDEVKCWQIRRQTKAPQAAGTIHTDFERGFICAEVMKFDDLKELGSESA 360 AIHLIYFFTAGPDEVKCWQIRRQTKAPQAAGTIHTDFERGFICAEVMKFDDLKELGSESA Sbjct: 302 AIHLIYFFTAGPDEVKCWQIRRQTKAPQAAGTIHTDFERGFICAEVMKFDDLKELGSESA 361 Query: 361 VKAAGKYRQEGKTYVVQDGDIIFFKFNVSGGGKK 394 VKAAGKYRQEGKTYVVQDGDIIFFKFNVSGGGKK Sbjct: 362 VKAAGKYRQEGKTYVVQDGDIIFFKFNVSGGGKK 395 >2OHF-A nrPDB Length = 396 Score = 575 bits (1481), Expect = e-164, Method: Composition-based stats. Identities = 245/397 (61%), Positives = 297/397 (74%), Gaps = 5/397 (1%) Query: 1 MPPKASKKDAAPAERPILGRFSSHLKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTID 60 MPPK P PI+GRF + LKIGIVGLPNVGKSTFFN++T AENFPFCTID Sbjct: 1 MPPKKGGDGIKPP--PIIGRFGTSLKIGIVGLPNVGKSTFFNVLTNSQASAENFPFCTID 58 Query: 61 PNEARVYVPDERFDWLCQLYKPKSEVSAYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVD 120 PNE+RV VPDERFD+LCQ +KP S++ A+L + DIAGLV+GAH G+GLGNAFLSHI A D Sbjct: 59 PNESRVPVPDERFDFLCQYHKPASKIPAFLNVVDIAGLVKGAHNGQGLGNAFLSHISACD 118 Query: 121 GIFHVLRAFEDKEVTHIDDSVDPVRDLETIGEELRLKDIEFVQNKIDDLEKSMKRSNDKQ 180 GIFH+ RAFED ++TH++ SVDP+RD+E I EEL+LKD E + ID LEK R DK+ Sbjct: 119 GIFHLTRAFEDDDITHVEGSVDPIRDIEIIHEELQLKDEEMIGPIIDKLEKVAVRGGDKK 178 Query: 181 LKLEHELCEKVKAHLEDG-KDVRF-GDWKSADIEILNTFQLLTAKPVVYLVNMSEKDYQR 238 LK E+++ KVK+ + D K VRF DW +IE+LN LT+KP+VYLVN+SEKDY R Sbjct: 179 LKPEYDIMCKVKSWVIDQKKPVRFYHDWNDKEIEVLNKHLFLTSKPMVYLVNLSEKDYIR 238 Query: 239 KKNKFLPKIHAWVQEHG-GETIIPFSCAFERLLADMPPDEAAKYCAENQIASVIPKIIKT 297 KKNK+L KI WV ++ G +IPFS A E L ++ +E KY N S +PKIIK Sbjct: 239 KKNKWLIKIKEWVDKYDPGALVIPFSGALELKLQELSAEERQKYLEANMTQSALPKIIKA 298 Query: 298 GFAAIHLIYFFTAGPDEVKCWQIRRQTKAPQAAGTIHTDFERGFICAEVMKFDDLKELGS 357 GFAA+ L YFFTAGPDEV+ W IR+ TKAPQAAG IHTDFE+GFI AEVMK++D KE GS Sbjct: 299 GFAALQLEYFFTAGPDEVRAWTIRKGTKAPQAAGKIHTDFEKGFIMAEVMKYEDFKEEGS 358 Query: 358 ESAVKAAGKYRQEGKTYVVQDGDIIFFKFNVSGGGKK 394 E+AVKAAGKYRQ+G+ Y+V+DGDIIFFKFN KK Sbjct: 359 ENAVKAAGKYRQQGRNYIVEDGDIIFFKFNTPQQPKK 395 >1NI3-A nrPDB Length = 392 Score = 517 bits (1331), Expect = e-147, Method: Composition-based stats. Identities = 201/392 (51%), Positives = 272/392 (69%), Gaps = 11/392 (2%) Query: 1 MPPKASKKDAAPAERPILGRFSSHLKIGIVGLPNVGKSTFFNIVTKLSI-PAENFPFCTI 59 MPPK ++ + GR ++LK GIVG+PNVGKSTFF +TK + N+P+ TI Sbjct: 1 MPPKKQQE----VVKVQWGRPGNNLKTGIVGMPNVGKSTFFRAITKSVLGNPANYPYATI 56 Query: 60 DPNEARVYVPDERFDWLCQLYKPKSEVSAYLEINDIAGLVRGAHAGEGLGNAFLSHIRAV 119 DP EA+V VPDERFDWLC+ YKPKS V A+L + DIAGL +GA G GLGNAFLSH+RAV Sbjct: 57 DPEEAKVAVPDERFDWLCEAYKPKSRVPAFLTVFDIAGLTKGASTGVGLGNAFLSHVRAV 116 Query: 120 DGIFHVLRAFEDKEVTHIDDSVDPVRDLETIGEELRLKDIEFVQNKIDDLEKSMKRSND- 178 D I+ V+RAF+D E+ H++ VDP+RDL I +EL +KD EFV+ ++ L K R + Sbjct: 117 DAIYQVVRAFDDAEIIHVEGDVDPIRDLSIIVDELLIKDAEFVEKHLEGLRKITSRGANT 176 Query: 179 ---KQLKLEHELCEKVKAHLEDGK-DVRFGDWKSADIEILNTFQLLTAKPVVYLVNMSEK 234 K K E + EKV +L + K +R GDW + ++EI+N+ LLTAKPV+YLVNMSE+ Sbjct: 177 LEMKAKKEEQAIIEKVYQYLTETKQPIRKGDWSNREVEIINSLYLLTAKPVIYLVNMSER 236 Query: 235 DYQRKKNKFLPKIHAWVQEHG-GETIIPFSCAFERLLADMPPDEAAKYCAENQIASVIPK 293 D+ R+KNK+LPKI W+ E+ G+T+IP S AFE L + +EA + C + S++PK Sbjct: 237 DFLRQKNKYLPKIKKWIDENSPGDTLIPMSVAFEERLTNFTEEEAIEECKKLNTKSMLPK 296 Query: 294 IIKTGFAAIHLIYFFTAGPDEVKCWQIRRQTKAPQAAGTIHTDFERGFICAEVMKFDDLK 353 II TG+ A++LI +FT G DEV+ W IR+ TKAPQAAG IHTDFE+ F+ E+M + DL Sbjct: 297 IIVTGYNALNLINYFTCGEDEVRSWTIRKGTKAPQAAGVIHTDFEKAFVVGEIMHYQDLF 356 Query: 354 ELGSESAVKAAGKYRQEGKTYVVQDGDIIFFK 385 + +E+A +AAGKY +GK YV++ GDI +K Sbjct: 357 DYKTENACRAAGKYLTKGKEYVMESGDIAHWK 388 >1JAL-A nrPDB Length = 363 Score = 489 bits (1258), Expect = e-139, Method: Composition-based stats. Identities = 147/365 (40%), Positives = 223/365 (61%), Gaps = 5/365 (1%) Query: 25 LKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPDERFDWLCQLYKPKS 84 K GIVGLPNVGKST FN +TK I A N+PFCTI+PN V +PD R D L ++ KP+ Sbjct: 3 FKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKPER 62 Query: 85 EVSAYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVDGIFHVLRAFEDKEVTHIDDSVDPV 144 + +E DIAGLV GA GEGLGN FL++IR D I HV+R FE+ ++ H+ +DP+ Sbjct: 63 ILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKIDPL 122 Query: 145 RDLETIGEELRLKDIEFVQNKIDDLEKSMKRSNDKQLKLEHELCEKVKAHLEDGKDVRFG 204 D++TI EL L D++ + I L+K K DK+ K E + EK+ LE+ +R Sbjct: 123 DDIDTINTELALADLDSCERAIQRLQKRAK-GGDKEAKFELSVMEKILPVLENAGMIRSV 181 Query: 205 DWKSADIEILNTFQLLTAKPVVYLVNMSEKDYQRKKNKFLPKIHAWVQEHGGETIIPFSC 264 +++ + ++ LT KP +Y+ N++E ++ N +L ++ + G ++P Sbjct: 182 GLDKEELQAIKSYNFLTLKPTMYIANVNEDGFE--NNPYLDRVREIAAKEGA-VVVPVCA 238 Query: 265 AFERLLADMPPDEAAKYCAENQIASV-IPKIIKTGFAAIHLIYFFTAGPDEVKCWQIRRQ 323 A E +A++ +E ++ + I + ++I+ G+A ++L +FTAG EV+ W + Sbjct: 239 AIESEIAELDDEEKVEFLQDLGIEEPGLNRVIRAGYALLNLQTYFTAGVKEVRAWTVSVG 298 Query: 324 TKAPQAAGTIHTDFERGFICAEVMKFDDLKELGSESAVKAAGKYRQEGKTYVVQDGDIIF 383 AP+AA IHTDFE+GFI AEV+ ++D + E+ K AGK+R EGK Y+VQDGD++ Sbjct: 299 ATAPKAAAVIHTDFEKGFIRAEVIAYEDFIQFNGENGAKEAGKWRLEGKDYIVQDGDVMH 358 Query: 384 FKFNV 388 F+FNV Sbjct: 359 FRFNV 363 >2DBY-A nrPDB Length = 368 Score = 454 bits (1167), Expect = e-128, Method: Composition-based stats. Identities = 157/369 (42%), Positives = 217/369 (58%), Gaps = 9/369 (2%) Query: 25 LKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPDERFDWLCQLYKPKS 84 L +GIVGLPNVGKST FN +T+ + A N+PF TID N V + DER L + + Sbjct: 2 LAVGIVGLPNVGKSTLFNALTRANALAANYPFATIDKNVGVVPLEDERLYALQRTFAKGE 61 Query: 85 EVS----AYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVDGIFHVLRAFEDKEVTHIDDS 140 V ++E DIAGLV+GAH GEGLGN FL+HIR V I HVLR F D +V H+ Sbjct: 62 RVPPVVPTHVEFVDIAGLVKGAHKGEGLGNQFLAHIREVAAIAHVLRCFPDPDVVHVMGR 121 Query: 141 VDPVRDLETIGEELRLKDIEFVQNKIDDLEKSMKRSNDKQLKLEHELCEKVKAHLEDGKD 200 VDP+ D E + EL L D+ ++ +++ L K R++ ++L L E E + HL++GK Sbjct: 122 VDPLEDAEVVETELLLADLATLERRLERLRKEA-RADRERLPL-LEAAEGLYVHLQEGKP 179 Query: 201 VRFGDWKSADIEILNTFQLLTAKPVVYLVNMSEKDY-QRKKNKFLPKIHAWVQEHGGETI 259 R A L LLTAKPV+Y+ N++E+D + N + + E G E + Sbjct: 180 ARTFPPSEAVARFLKETPLLTAKPVIYVANVAEEDLPDGRGNPQVEAVRRKALEEGAEVV 239 Query: 260 IPFSCAFERLLADMPPDEAAKYCAENQIA-SVIPKIIKTGFAAIHLIYFFTAGPDEVKCW 318 + S E LA++ +EA + A + S + ++ + G+ A+ L+ FFTAG EV+ W Sbjct: 240 V-VSARLEAELAELSGEEARELLAAYGLQESGLQRLARAGYRALDLLTFFTAGEKEVRAW 298 Query: 319 QIRRQTKAPQAAGTIHTDFERGFICAEVMKFDDLKELGSESAVKAAGKYRQEGKTYVVQD 378 +RR TKAP+AAG IH+D ERGFI AEV+ +D L E G + K G R EGK Y VQD Sbjct: 299 TVRRGTKAPRAAGEIHSDMERGFIRAEVIPWDKLVEAGGWARAKERGWVRLEGKDYEVQD 358 Query: 379 GDIIFFKFN 387 GD+I+ FN Sbjct: 359 GDVIYVLFN 367 >1WXQ-A nrPDB Length = 397 Score = 257 bits (655), Expect = 8e-69, Method: Composition-based stats. Identities = 99/419 (23%), Positives = 162/419 (38%), Gaps = 90/419 (21%) Query: 25 LKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVY-VPDERFDWL-----CQ 78 ++IG+VG PNVGKSTFF+ T + + N+PF TI+ N Y + D L Q Sbjct: 1 MEIGVVGKPNVGKSTFFSAATLVDVEIANYPFTTIEANVGVTYAITDHPCKELGCSPNPQ 60 Query: 79 LYKPKSEVSAY-LEINDIAGLVRGAHAGEGLGNAFLSHIRAVDGIFHVLRAF-EDKEVTH 136 Y+ ++ ++ +++ D+AGLV GAH G GLGN FL +R + HV+ A + Sbjct: 61 NYEYRNGLALIPVKMVDVAGLVPGAHEGRGLGNKFLDDLRMASALIHVVDATGKTDPEGQ 120 Query: 137 IDDSVDPVRDLETIGEELRLKDIEFVQNKIDDLEKSMKRSNDKQLKLEHELCEKVKAHLE 196 D DPV D+E + E+ + D K +K +++KLE + E + Sbjct: 121 PTDYHDPVEDIEFLEREIDYWIYGILSKGWDKFAKRIKL---QKIKLESAIAEHLSGIGV 177 Query: 197 DGKDVRFG-----------DWKSADIEILNTFQLLTAKPVVYLVNMSEKDYQRKKNKFLP 245 + DV W D+ + KP+V N ++ + + + Sbjct: 178 NENDVWEAMHKLNLPEDPTKWSQDDLLAFASEIRRVNKPMVIAANKADAASDEQIKRLVR 237 Query: 246 KIHAWVQEHGGETIIPFSCAFERLLA---------------------DMPPDEAAKYC-- 282 + +E G +IP S A E L DM + Sbjct: 238 E-----EEKRGYIVIPTSAAAELTLRKAAKAGFIEYIPGASEFKVLRDMSEKQKRALMVI 292 Query: 283 --------AENQIASVIPKIIKTGFAAIHLIYFFTAGPDEVK-----------CWQIRRQ 323 + VI +++ F + LI + DE K + +++ Sbjct: 293 KEKVLDRFGSTGVQEVINRVV---FDLLKLIPVYPV-HDENKLTDQFGNVLPHVFLMKKG 348 Query: 324 TKAPQAAGTIHTDFERGFICAEVMKFDDLKELGSESAVKAAGKYRQEGKTYVVQDGDII 382 + A +HTD +GF+ A + A K R G+ Y +Q DI+ Sbjct: 349 STPRDLAFKVHTDLGKGFLYA----------------INARTKRRV-GEDYELQFNDIV 390 >5M04-A nrPDB Length = 360 Score = 174 bits (442), Expect = 4e-44, Method: Composition-based stats. Identities = 50/190 (26%), Positives = 80/190 (42%), Gaps = 16/190 (8%) Query: 3 PKASKKDAAPAERPILGRFSSHLKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPN 62 P+ +R +L +G++G+PN GKSTF V+ ++PF T+ P+ Sbjct: 158 PRQKTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPS 217 Query: 63 EARVYVPDERFDWLCQLYKPKSEVSAYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVDGI 122 V + +E KS V A DI GL+ GA G GLG FL H+ + Sbjct: 218 LGVVRMDNE-----------KSFVVA-----DIPGLIEGAAEGAGLGIRFLKHLERCRVL 261 Query: 123 FHVLRAFEDKEVTHIDDSVDPVRDLETIGEELRLKDIEFVQNKIDDLEKSMKRSNDKQLK 182 H++ ++++ + +LE ++L K V NKID L+K K + Sbjct: 262 LHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAIA 321 Query: 183 LEHELCEKVK 192 +K Sbjct: 322 EALGWEDKYY 331 >4CSU-9 nrPDB Length = 390 Score = 172 bits (436), Expect = 2e-43, Method: Composition-based stats. Identities = 50/190 (26%), Positives = 80/190 (42%), Gaps = 16/190 (8%) Query: 3 PKASKKDAAPAERPILGRFSSHLKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPN 62 P+ +R +L +G++G+PN GKSTF V+ ++PF T+ P+ Sbjct: 138 PRQKTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPS 197 Query: 63 EARVYVPDERFDWLCQLYKPKSEVSAYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVDGI 122 V + +E KS V A DI GL+ GA G GLG FL H+ + Sbjct: 198 LGVVRMDNE-----------KSFVVA-----DIPGLIEGAAEGAGLGIRFLKHLERCRVL 241 Query: 123 FHVLRAFEDKEVTHIDDSVDPVRDLETIGEELRLKDIEFVQNKIDDLEKSMKRSNDKQLK 182 H++ ++++ + +LE ++L K V NKID L+K K + Sbjct: 242 LHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAIA 301 Query: 183 LEHELCEKVK 192 +K Sbjct: 302 EALGWEDKYY 311 >1LNZ-A nrPDB Length = 342 Score = 163 bits (413), Expect = 1e-40, Method: Composition-based stats. Identities = 56/220 (25%), Positives = 82/220 (37%), Gaps = 31/220 (14%) Query: 3 PKASKKDAAPAERPILGRFSSHLKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPN 62 P+ S+ ER I+ +G+VG P+VGKST ++V+ ++ F T+ PN Sbjct: 137 PQLSENGEPGKERYIVLELKVLADVGLVGFPSVGKSTLLSVVSSAKPKIADYHFTTLVPN 196 Query: 63 EARVYVPDERFDWLCQLYKPKSEVSAYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVDGI 122 V D R + D+ GL+ GAH G GLG+ FL HI I Sbjct: 197 LGMVETDDGR----------------SFVMADLPGLIEGAHQGVGLGHQFLRHIERTRVI 240 Query: 123 FHVLRAFEDKEVTHIDDSVDPVRDLETIGEELRLKDIEFVQNKIDDLEKSMKRSNDKQLK 182 HV+ + DP D TI +EL ++ + + +N + Sbjct: 241 VHVIDMSGL-------EGRDPYDDYLTINQELSEYNLRLTER------PQIIVANKMDMP 287 Query: 183 LEHELCEKVKAHLEDGKDVRFGDWKSADIEILNTFQLLTA 222 E E K L D V + E L A Sbjct: 288 EAAENLEAFKEKLTDDYPV--FPISAVTREGLRELLFEVA 325 >1UDX-A nrPDB Length = 416 Score = 144 bits (364), Expect = 5e-35, Method: Composition-based stats. Identities = 48/189 (25%), Positives = 80/189 (42%), Gaps = 34/189 (17%) Query: 3 PKASKKDAAPAERPILGRFSSHLKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPN 62 P+ ++ +R + +G+VG PN GKS+ +T+ +PF T+ PN Sbjct: 136 PRFAEAGEEGEKRRLRLELMLIADVGLVGYPNAGKSSLLAAMTRAHPKIAPYPFTTLSPN 195 Query: 63 EARVYVPDERFDWLCQLYKPKSEVSAYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVDGI 122 V V +E + DI G++ GA G+GLG FL HI + Sbjct: 196 LGVVEVSEEE----------------RFTLADIPGIIEGASEGKGLGLEFLRHIARTRVL 239 Query: 123 FHVLRAFEDKEVTHIDDSVDPVRDLETIGEELRLKDIEFVQ-------NKIDDLEKSMKR 175 +VL A + +P++ LET+ +E+ D ++ NK+D LE+ + Sbjct: 240 LYVLDAAD-----------EPLKTLETLRKEVGAYDPALLRRPSLVALNKVDLLEEEAVK 288 Query: 176 SNDKQLKLE 184 + L E Sbjct: 289 ALADALARE 297 >5ZZM-A nrPDB Length = 426 Score = 109 bits (271), Expect = 3e-24, Method: Composition-based stats. Identities = 43/159 (27%), Positives = 66/159 (41%), Gaps = 30/159 (18%) Query: 27 IGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPDERFDWLCQLYKPKSEV 86 + +VG N GKST FN +T+ + A + F T+DP R+ V D Sbjct: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVAD---------------- 243 Query: 87 SAYLEINDIAGLVRGAHAGEGLGNAF---LSHIRAVDGIFHVLRAFEDKEVTHIDDSVDP 143 + D G +R H L AF L R + HV+ A + + ++++ Sbjct: 244 VGETVLADTVGFIR--HLPHDLVAAFKATLQETRQATLLLHVIDAAD----VRVQENIEA 297 Query: 144 VRDLETIGEELRLKDIE--FVQNKIDDLEKSMKRSNDKQ 180 V T+ EE+ +I V NKID LE R + + Sbjct: 298 V---NTVLEEIDAHEIPTLLVMNKIDMLEDFEPRIDRDE 333 >4A9A-A nrPDB Length = 376 Score = 75.6 bits (184), Expect = 4e-14, Method: Composition-based stats. Identities = 41/223 (18%), Positives = 80/223 (35%), Gaps = 37/223 (16%) Query: 25 LKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPDERFDWLCQLYKPKS 84 +G VG P+VGKST + +T A + F T+ + Sbjct: 73 ASVGFVGFPSVGKSTLLSKLTGTESEAAEYEFTTLVTVPGVIRYKG-------------- 118 Query: 85 EVSAYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVDGIFHVLRAFEDKEVTHIDDSVDPV 144 A +++ D+ G++ GA G G G ++ R + +F +L + P+ Sbjct: 119 ---AKIQMLDLPGIIDGAKDGRGRGKQVIAVARTCNLLFIILDVNK------------PL 163 Query: 145 RDLETIGEELRLKDIEFVQNKIDDLEKSMKRSN---DKQLKLEH----ELCEKVKAHLED 197 + I +EL I + D L K ++ + L H E+ + + + Sbjct: 164 HHKQIIEKELEGVGIRLNKTPPDILIKKKEKGGISITNTVPLTHLGNDEIRAVMSEYRIN 223 Query: 198 GKDVRF-GDWKSADIEILNTFQLLTAKPVVYLVNMSEKDYQRK 239 ++ F D D+ + P +Y++N + + Sbjct: 224 SAEIAFRCDATVDDLIDVLEASSRRYMPAIYVLNKIDSLSIEE 266 >2WJG-A nrPDB Length = 188 Score = 71.0 bits (172), Expect = 8e-13, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%) Query: 22 SSHLK---IGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPDERFD 74 SH+K I ++G PNVGKST FN +T ++ N+P T++ E E+F Sbjct: 2 GSHMKSYEIALIGNPNVGKSTIFNALTGENVYIGNWPGVTVEKKEGEFEYNGEKFK 57 >2WJI-A nrPDB Length = 165 Score = 69.8 bits (169), Expect = 2e-12, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 28/51 (54%) Query: 24 HLKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPDERFD 74 +I ++G PNVGKST FN +T ++ N+P T++ E E+F Sbjct: 3 SYEIALIGNPNVGKSTIFNALTGENVYIGNWPGVTVEKKEGEFEYNGEKFK 53 >3K53-A nrPDB Length = 271 Score = 68.7 bits (166), Expect = 4e-12, Method: Composition-based stats. Identities = 54/272 (19%), Positives = 98/272 (36%), Gaps = 44/272 (16%) Query: 27 IGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPDERFDWLCQLYKPKSEV 86 + +VG PNVGK+T FN +T L N+P T++ E + ++ F Sbjct: 6 VALVGNPNVGKTTIFNALTGLRQHVGNWPGVTVEKKEGIMEYREKEF------------- 52 Query: 87 SAYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVDGIFHVLRAFEDKEVTHIDDSVDPVRD 146 + D+ G+ L + + A + I + I DS +R+ Sbjct: 53 ----LVVDLPGI-------YSLTAHSIDELIARNFILD----GNADVIVDIVDSTCLMRN 97 Query: 147 LETIGE--ELRLKDIEFVQNKIDDLEKSMKRSNDKQLKLEHELCEKVKAHLEDGKDVRFG 204 L E E+ +K+I V NK D L+K + + K+++ E V + K Sbjct: 98 LFLTLELFEMEVKNIILVLNKFDLLKKKGAKIDIKKMRKEL----GVPVIPTNAKKGEGV 153 Query: 205 DWKSADIEILNTFQLLTAKPVVYLVNMSEKDYQRKKNKFLPKIHAWVQEHGGETIIPFSC 264 + I L +T P++ ++D +R+ + P Sbjct: 154 EELKRMI-ALMAEGKVTTNPII---PRYDEDIEREIKHISELLRGTPLAEK----YPIRW 205 Query: 265 AFERLLADMPPDEAAKYCAENQIASVIPKIIK 296 +LL +E K + + +I+K Sbjct: 206 LALKLLQR--DEEVIKLVLKYLGQEKMDEILK 235 >3A1U-A nrPDB Length = 258 Score = 59.0 bits (141), Expect = 4e-09, Method: Composition-based stats. Identities = 49/283 (17%), Positives = 101/283 (35%), Gaps = 38/283 (13%) Query: 25 LKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPDERFDWLCQLYKPKS 84 +K+ + G PNVGK++ FN +T N+P T++ E Sbjct: 6 VKVALAGCPNVGKTSLFNALTGTKQYVANWPGVTVEKKEGVFTYKGY------------- 52 Query: 85 EVSAYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVDGIFHVLRAFEDKEVTHIDDSVDPV 144 + + D+ G LG + + A D + + V + DSV+P Sbjct: 53 ----TINLIDLPGT-------YSLGYSSIDEKIARDYLLK----GDADLVILVADSVNPE 97 Query: 145 RDLETIGEELRL-KDIEFVQNKIDDLEKSMKRSNDKQLKLEHEL----CEKVKAHLEDGK 199 + L + E L + K + ID+ +K+ + + +L+ + V + Sbjct: 98 QSLYLLLEILEMEKKVILAMTAIDEAKKTGMKIDRYELQKHLGIPVVFTSSVTGEGLEEL 157 Query: 200 DVRFGDWKSADIEILNTFQLLTAKPVVYLVNMSEKDYQRKKNKFLPKIHAWVQEHGGETI 259 + ++ + IL+ L + V + E + KK + P + ++ Sbjct: 158 KEKIVEYAQKNT-ILHRMILDYGEKVESEIKKVENFLRDKKLRINP--RYFALKYLSGDP 214 Query: 260 IPFSCAFERLLADMPPDEAAKY--CAENQIASVIPKIIKTGFA 300 +S + L ++ +E Y + + ++K FA Sbjct: 215 EFYSEGVKLGLPELSEEERIGYRLLIAKRKREYVENVVKEAFA 257 >3A1W-A nrPDB Length = 168 Score = 59.0 bits (141), Expect = 4e-09, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 63/164 (38%), Gaps = 29/164 (17%) Query: 25 LKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPDERFDWLCQLYKPKS 84 +K+ + G PNVGK++ FN +T N+P T++ E Sbjct: 6 VKVALAGCPNVGKTSLFNALTGTKQYVANWPGVTVEKKEGVFTYKGY------------- 52 Query: 85 EVSAYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVDGIFHVLRAFEDKEVTHIDDSVDPV 144 + + D+ G LG + + A D + + V + DSV+P Sbjct: 53 ----TINLIDLPGT-------YSLGYSSIDEKIARDYLLK----GDADLVILVADSVNPE 97 Query: 145 RDLETIGEELRL-KDIEFVQNKIDDLEKSMKRSNDKQLKLEHEL 187 + L + E L + K + ID+ +K+ + + +L+ + Sbjct: 98 QSLYLLLEILEMEKKVILAMTAIDEAKKTGMKIDRYELQKHLGI 141 >2E87-A nrPDB Length = 357 Score = 57.9 bits (138), Expect = 8e-09, Method: Composition-based stats. Identities = 42/225 (18%), Positives = 80/225 (35%), Gaps = 37/225 (16%) Query: 27 IGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPDERFDWLCQLYKPKSEV 86 + I G PNVGKST +T ++PF T N + D F + Sbjct: 170 VVIAGHPNVGKSTLLKALTTAKPEIASYPFTTRGINVGQFE--DGYFRY----------- 216 Query: 87 SAYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVDGIFHVLRAFEDKEVTHIDDSVDPVRD 146 +I D GL+ + I A+ + +++ D + + Sbjct: 217 ----QIIDTPGLLDRPISERNEIEK--QAILALRYLGNLIIYIFDPSEHCGFPLEEQIHL 270 Query: 147 LETIGEELRLKDIEFVQNKIDDLEKSMKRSNDKQLKLEHELCEKVKAHLEDGKDVRFGDW 206 E + E + V NKID ++ + +LE + EK ++ Sbjct: 271 FEEVHGEFKDLPFLVVINKIDVADEENIK------RLEKFVKEKGL------NPIKISAL 318 Query: 207 KSADIEILNTFQLLTAKPVVYLVNMSEKDYQRKKNKFLPKIHAWV 251 K I+++ + T +P ++EK + K + L + +++ Sbjct: 319 KGTGIDLVKEEIIKTLRP------LAEKVAREKIERELRRYRSYL 357 >2QTH-A nrPDB Length = 364 Score = 57.9 bits (138), Expect = 8e-09, Method: Composition-based stats. Identities = 42/200 (21%), Positives = 83/200 (41%), Gaps = 33/200 (16%) Query: 27 IGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPDERFDWLCQLYKPKSEV 86 IGIVG N GK++ FN +T L+ + F T+ P + + + + Sbjct: 182 IGIVGYTNSGKTSLFNSLTGLTQKVDTKLFTTMSPKRYAIPINNRK-------------- 227 Query: 87 SAYLEINDIAGLVRGAHAGEGLGNAF---LSHIRAVDGIFHVLRAF--EDKEVTHIDDSV 141 + + D G +RG + +AF LS + D + V+ + E+ + + S Sbjct: 228 ---IMLVDTVGFIRGI--PPQIVDAFFVTLSEAKYSDALILVIDSTFSENLLIETLQSSF 282 Query: 142 DPVRDLETIGEELRLKDIEFVQNKIDDLEKSMKRSNDKQLKLEHELCEKVKAHLEDGKDV 201 + +R++ + K I NKID + + K+L L +L +++ + + D + Sbjct: 283 EILREIG-----VSGKPILVTLNKIDKINGDLY----KKLDLVEKLSKELYSPIFDVIPI 333 Query: 202 RFGDWKSADIEILNTFQLLT 221 + ++ +QL T Sbjct: 334 SALKRTNLELLRDKIYQLAT 353 >2WIC-A nrPDB Length = 267 Score = 57.1 bits (136), Expect = 1e-08, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 24/50 (48%) Query: 25 LKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPDERFD 74 L +G++G PN GK+T FN +T N+ T++ E D + Sbjct: 4 LTVGLIGNPNSGKTTLFNQLTGARQRVGNWAGVTVERKEGIFATTDHQVT 53 >3IBY-A nrPDB Length = 256 Score = 56.3 bits (134), Expect = 2e-08, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 40/106 (37%), Gaps = 24/106 (22%) Query: 29 IVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPDERFDWLCQLYKPKSEVSA 88 ++G PN GK+T FN +T + N+P T++ + + Sbjct: 6 LIGNPNCGKTTLFNALTNANQRVGNWPGVTVEKKTGEFLLGEH----------------- 48 Query: 89 YLEINDIAGL------VRGAHAGEGLGNAFLSHIRAVDGIFHVLRA 128 +EI D+ G+ G E + + + D I +V+ A Sbjct: 49 LIEITDLPGVYSLVANAEGISQDEQIAAQSVIDLEY-DCIINVIDA 93 >3J8G-X nrPDB Length = 490 Score = 55.6 bits (132), Expect = 3e-08, Method: Composition-based stats. Identities = 34/147 (23%), Positives = 48/147 (32%), Gaps = 30/147 (20%) Query: 27 IGIVGLPNVGKSTFFNIVTKLS-IPAENFPFCTIDPNEARVYVPDERFDWLCQLYKPKSE 85 + +VG PNVGKST FN +T+ +FP T D R + F Sbjct: 5 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREF------------ 52 Query: 86 VSAYLEINDIAGLVRGAHAGEG--LGNAFLSHIRAVDGIFHVLRAFEDKEVTHIDDSVDP 143 D G + G G + L I D + ++ A + P Sbjct: 53 -----ICIDTGG-IDGTEDGVETRMAEQSLLAIEEADVVLFMVDA---------RAGLMP 97 Query: 144 VRDLETIGEELRLKDIEFVQNKIDDLE 170 + R K V NK D L+ Sbjct: 98 ADEAIAKHLRSREKPTFLVANKTDGLD 124 Score = 44.4 bits (103), Expect = 8e-05, Method: Composition-based stats. Identities = 42/181 (23%), Positives = 63/181 (34%), Gaps = 35/181 (19%) Query: 25 LKIGIVGLPNVGKSTFFNIV-TKLSIPAENFPFCTIDPNEARVYVPDERFDWLCQLYKPK 83 +K+ IVG PNVGKST N + + + + P T D +Y+P ER Sbjct: 203 IKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRDS----IYIPMERDGR-------- 250 Query: 84 SEVSAYLEINDIAGLVRGAHAGEGLGNAF-----LSHIRAVDGIFHVLRAFEDKEVTHID 138 + D AG VR F L I + + V+ A E Sbjct: 251 -----EYVLIDTAG-VRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISD---- 300 Query: 139 DSVDPVRDLETIGEELRL-KDIEFVQNKIDDLEKSMKRSNDKQLKLEHELCEKVKAHLED 197 +DL +G L + + V NK D L + +K + L + + H Sbjct: 301 ------QDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFIS 354 Query: 198 G 198 Sbjct: 355 A 355 >4R98-A nrPDB Length = 271 Score = 55.2 bits (131), Expect = 4e-08, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 25/50 (50%) Query: 25 LKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPDERFD 74 L IG++G PN GK+T FN +T N+ T++ E + D + Sbjct: 4 LTIGLIGNPNSGKTTLFNQLTGSRQRVGNWAGVTVERKEGQFSTTDHQVT 53 >1MKY-A nrPDB Length = 439 Score = 54.4 bits (129), Expect = 7e-08, Method: Composition-based stats. Identities = 42/181 (23%), Positives = 65/181 (35%), Gaps = 35/181 (19%) Query: 4 KASKKDAAPAERPILGRFSSHLKIGIVGLPNVGKSTFFNIV-TKLSIPAENFPFCTIDPN 62 K +K +P + +K+ IVG PNVGKST FN + K P T DP Sbjct: 163 KLEEKGLDLESKP---EITDAIKVAIVGRPNVGKSTLFNAILNKERALVSPIPGTTRDPV 219 Query: 63 EARVYVPDERFDWLCQLYKPKSEVSAYLEINDIAGLVRGAHAGEGLGNAF-----LSHIR 117 + V++ ++ D AGL R + + + I Sbjct: 220 DDEVFIDGRKY-----------------VFVDTAGLRRKSRVEPRTVEKYSNYRVVDSIE 262 Query: 118 AVDGIFHVLRAFEDKEVTHIDDSVDPVRDLETIGEELRLKDIEFVQNKIDDLEKSMKRSN 177 D + VL A + +T D + + E R + V NK D + KR + Sbjct: 263 KADVVVIVLDATQG--ITRQDQRMAGL-------MERRGRASVVVFNKWDLVVHREKRYD 313 Query: 178 D 178 + Sbjct: 314 E 314 Score = 37.8 bits (86), Expect = 0.008, Method: Composition-based stats. Identities = 36/160 (22%), Positives = 62/160 (38%), Gaps = 34/160 (21%) Query: 29 IVGLPNVGKSTFFNIVT-KLSIPAENFPFCTIDPNEARVYVPDERFDWLCQLYKPKSEVS 87 IVG PNVGKST FN + K E+ T DP + V + F Sbjct: 6 IVGRPNVGKSTLFNKLVKKKKAIVEDEEGVTRDPVQDTVEWYGKTF-------------- 51 Query: 88 AYLEINDIAGLVRGAHA--GEGLGNAFLSHIRAVDGIFHVLRAFEDKEVTHIDDSVDPVR 145 ++ D G+ + + L+ IR D + V+ + +T D+S+ Sbjct: 52 ---KLVDTCGVFDNPQDIISQKMKEVTLNMIREADLVLFVVDG--KRGITKEDESL---- 102 Query: 146 DLETIGEELRLKDIEFVQNKIDDLEKSMKRSNDKQLKLEH 185 + + + D V NK ++L + ++++K E Sbjct: 103 -ADFLRK--STVDTILVANKAENLREF-----EREVKPEL 134 >3GEH-A nrPDB Length = 462 Score = 53.6 bits (127), Expect = 1e-07, Method: Composition-based stats. Identities = 48/265 (18%), Positives = 90/265 (33%), Gaps = 42/265 (15%) Query: 21 FSSHLKIGIVGLPNVGKSTFFNIVTKL-SIPAENFPFCTIDPNEARVYVPDERFDWLCQL 79 + LK+ IVG PNVGKS+ N ++ + P T D E+++ V Sbjct: 221 LRTGLKVAIVGRPNVGKSSLLNAWSQSDRAIVTDLPGTTRDVVESQLVVGGIP------- 273 Query: 80 YKPKSEVSAYLEINDIAGLVRGAHAGEGLGNAFLSHIRAV-DGIFHVLRAFEDKEVTHID 138 +++ D AG+ + E +G D + + A + Sbjct: 274 ----------VQVLDTAGIRETSDQVEKIGVERSRQAANTADLVLLTIDAATGWTTGDQE 323 Query: 139 DSVDPVRDLETIGEELRLKDIEFVQNKIDDLEKSMKRSNDKQLKLEHELCEKVKAHLEDG 198 I E+++ + + V NKID +EK QL E E + + Sbjct: 324 -----------IYEQVKHRPLILVMNKIDLVEK--------QLITSLEYPENITQIVHTA 364 Query: 199 KDVRFG-DWKSADIEILNTFQLLTAKPVVYLVNMSEKDYQRKKNKFLPKIHAWVQEH--G 255 + G D I + + A + +N + + L ++ A + + Sbjct: 365 AAQKQGIDSLETAILEIVQTGKVQAADMDLAINQRQAAALTQAKMSLEQVQATITQQLPL 424 Query: 256 GETIIPFSCAFERLLADMPPDEAAK 280 I A + L ++ +E + Sbjct: 425 DFWTIDLRGAIQA-LGEITGEEVTE 448 >3LX8-A nrPDB Length = 272 Score = 52.9 bits (125), Expect = 2e-07, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 6/72 (8%) Query: 22 SSHLKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARV------YVPDERFDW 75 S +I ++G PN GK++ FN++T + N+P T++ V + D + Sbjct: 1 GSMTEIALIGNPNSGKTSLFNLITGHNQRVGNWPGVTVERKSGLVKKNKDLEIQDLPGIY 60 Query: 76 LCQLYKPKSEVS 87 Y P+ +V+ Sbjct: 61 SMSPYSPEEKVA 72 >3W5J-A nrPDB Length = 204 Score = 50.9 bits (120), Expect = 1e-06, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 25/41 (60%) Query: 26 KIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARV 66 +I ++G+PN GKST FN +T + N+P T++ ++ Sbjct: 5 RIALLGMPNTGKSTLFNRMTGGAARVGNWPGITVELLSGKI 45 >1XZP-A nrPDB Length = 482 Score = 49.0 bits (115), Expect = 3e-06, Method: Composition-based stats. Identities = 53/269 (19%), Positives = 84/269 (31%), Gaps = 50/269 (18%) Query: 25 LKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPDERFDWLCQLYKPKS 84 L++ IVG PNVGKST N + +P D + + + Sbjct: 244 LRMVIVGKPNVGKSTLLNRLLNEDRAI-------------VTDIPGTTRDVISEEIVIRG 290 Query: 85 EVSAYLEINDIAGL-VRGAHAGEGLGN-AFLSHIRAVDGIFHVLRAFEDKEVTHIDDSVD 142 + I D AG+ E LG L I D + VL A + Sbjct: 291 IL---FRIVDTAGVRSETNDLVERLGIERTLQEIEKADIVLFVLDASSPLD--------- 338 Query: 143 PVRDLETIGEELRLKDIEFVQNKIDDLEKSMKRSNDKQLKLEHELCEKVKAHLEDGKDVR 202 + I E ++ K V NK+D +EK E E+ K+ D V+ Sbjct: 339 --EEDRKILERIKNKRYLVVINKVDVVEKIN----------EEEIKNKL---GTDRHMVK 383 Query: 203 FGDWKSADIEILNTFQLLTAKPVV------YLVNMSEKDYQRKKNKFLPKIHAWVQEHGG 256 K +E L + + + N+ +K L ++E G Sbjct: 384 ISALKGEGLEKLEESIYRETQEIFERGSDSLITNLRQKQLLENVKGHLEDAIKSLKE--G 441 Query: 257 ETIIPFSCAFERLLADMPPDEAAKYCAEN 285 + S ER L + + + Sbjct: 442 MPVDMASIDLERALNLLDEVTGRSFREDL 470 >5DN8-A nrPDB Length = 446 Score = 48.2 bits (113), Expect = 6e-06, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 1/48 (2%) Query: 27 IGIVGLPNVGKSTFFNIVTKLSIP-AENFPFCTIDPNEARVYVPDERF 73 I IVG PNVGKST FN +TK + P T D + +R Sbjct: 8 IAIVGRPNVGKSTLFNYLTKSRAALVADVPGVTRDRQYGETTIDSQRL 55 Score = 42.9 bits (99), Expect = 3e-04, Method: Composition-based stats. Identities = 34/157 (21%), Positives = 60/157 (38%), Gaps = 32/157 (20%) Query: 25 LKIGIVGLPNVGKSTFFNI-VTKLSIPAENFPFCTIDPNEARVYVPDERFDWLCQLYKPK 83 +KI ++G PNVGKST N + + + + P T D +Y+P R D Sbjct: 179 IKIAMIGRPNVGKSTLINRLLGEERVIVYDQPGTTRDS----IYIPFARNDE-------- 226 Query: 84 SEVSAYLEINDIAGLVRGAHAGEGLGNAF-----LSHIRAVDGIFHVLRAFEDKEVTH-- 136 + D AG +R + F L + A D + +L A + Sbjct: 227 -----NYTLIDTAG-IRRRAKIQDYVEKFSMIKSLQAMHAADVVIFLLDARQGVTEQDLR 280 Query: 137 -----IDDSVDPVRDLETIGEELRLKDIEFVQNKIDD 168 ++ V + + + L +++ + V+N ID Sbjct: 281 LLNRIVEAGVSLIIAVNKW-DGLNIEERDNVRNAIDR 316 >3R9W-A nrPDB Length = 307 Score = 47.5 bits (111), Expect = 9e-06, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 47/147 (31%), Gaps = 28/147 (19%) Query: 27 IGIVGLPNVGKSTFFNIVTKLSIP-AENFPFCTIDPNEARVYVPDERFDWLCQLYKPKSE 85 + IVG PNVGKST N + + T +P+E Sbjct: 12 VAIVGKPNVGKSTLLNNLLGTKVSIISPKAGTTRMRVLGVKNIPNE-------------- 57 Query: 86 VSAYLEINDIAGLVRGAHA---GEGLGNAFLSHIRAVDGIFHVLRAFEDKEVTHIDDSVD 142 A + D G+ + G + + D I ++ A E + + Sbjct: 58 --AQIIFLDTPGIYEPKKSDVLGHSMVEIAKQSLEEADVILFMIDATEGWRPRDEEIYQN 115 Query: 143 PVRDLETIGEELRLKDIEFVQNKIDDL 169 ++ L K + V NKID + Sbjct: 116 FIKPLN--------KPVIVVINKIDKI 134 Score = 32.8 bits (73), Expect = 0.26, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 39/97 (40%), Gaps = 8/97 (8%) Query: 183 LEHELCEKVKAHLEDGKDVRFG-----DWKSADIEILNTFQLLTAKPVVYLVNMSEKDYQ 237 L H + E K LE+ + F W+ D EI F KPV+ ++N +K Sbjct: 77 LGHSMVEIAKQSLEEADVILFMIDATEGWRPRDEEIYQNFIKPLNKPVIVVINKIDK--I 134 Query: 238 RKKNKFLPKIHAWVQEHGGET-IIPFSCAFERLLADM 273 LP I ++H T I+P S L ++ Sbjct: 135 GPAKNVLPLIDEIHKKHPELTEIVPISALKGANLDEL 171 >2DYK-A nrPDB Length = 161 Score = 47.1 bits (110), Expect = 1e-05, Method: Composition-based stats. Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Query: 26 KIGIVGLPNVGKSTFFNIVTKLS-IPAENFPFCTIDPNEARVYVPDERF 73 K+ IVG PNVGKS+ FN + K + P T D E V RF Sbjct: 3 KVVIVGRPNVGKSSLFNRLLKKRSAVVADVPGVTRDLKEGVVETDRGRF 51 >2QU8-A nrPDB Length = 228 Score = 45.5 bits (106), Expect = 3e-05, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 75/212 (35%), Gaps = 40/212 (18%) Query: 29 IVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPDERFDWLCQLYKPKSEVSA 88 + G PNVGKS+F NIV++ ++ +++ F T + D + + Sbjct: 34 LSGAPNVGKSSFMNIVSRANVDVQSYSFTTKNLYVGHF---DHKLNKYQ----------- 79 Query: 89 YLEINDIAGLVRGAHAGEG----LGNAFLSHIRAVDGIFHVLRAFEDKEVTHIDDSVDPV 144 I D GL+ A L+HI I ++ E +T I + ++ Sbjct: 80 ---IIDTPGLLDRAFENRNTIEMTTITALAHIN--GVILFIIDISEQCGLT-IKEQINLF 133 Query: 145 RDLETIGEELRLKDIEFVQNKIDDLEKSMKRSNDK----------QLKLEHELCEKVKAH 194 ++++ K I NKID ++K + ++ + Sbjct: 134 YSIKSV---FSNKSIVIGFNKIDKCNMDSLSIDNKLLIKQILDNVKNPIKFSSFSTLTGV 190 Query: 195 LEDGKDVRFGDW---KSADIEILNTFQLLTAK 223 + + + A+ +L+ QLL K Sbjct: 191 GVEQAKITACELLKNDQAESILLDQEQLLNTK 222 >4V7F-o nrPDB Length = 647 Score = 44.8 bits (104), Expect = 7e-05, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 21/48 (43%) Query: 29 IVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPDERFDWL 76 I G PNVGKS+F +TK + + + F T RF + Sbjct: 172 ICGYPNVGKSSFLRCITKSDVDVQPYAFTTKSLYVGHFDYKYLRFQAI 219 >1WF3-A nrPDB Length = 301 Score = 44.0 bits (102), Expect = 1e-04, Method: Composition-based stats. Identities = 49/282 (17%), Positives = 91/282 (32%), Gaps = 54/282 (19%) Query: 27 IGIVGLPNVGKSTFFNIVTKLSI-PAENFPFCTIDPNEARVYVPDERFDWLCQLYKPKSE 85 + IVG PNVGKST N + + + P P T + R Sbjct: 10 VAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTT-RKRLRGILTEGRR------------- 55 Query: 86 VSAYLEINDIAGLVRGAHAGEGLGNAFLSH-----IRAVDGIFHVLRA--FEDKEVTHID 138 + D GL H F+ + V+ + V+ E + Sbjct: 56 ---QIVFVDTPGL----HKPMDALGEFMDQEVYEALADVNAVVWVVDLRHPPTPEDELVA 108 Query: 139 DSVDPVRDLETIGEELRLKDIEFVQNKIDDLEKSMKRSNDKQLKLEHELCEKVKAHLEDG 198 ++ P+ + I V NK+D + ++ +K HEL + + + Sbjct: 109 RALKPL---------VGKVPILLVGNKLD-----AAKYPEEAMKAYHELLPEAEPRMLSA 154 Query: 199 KDVRFGDWKSADIEILNTFQLLTAKPVVYLVNMSEKDYQRKKNKFLPKIHAWVQEHGGET 258 D R AD+ L + P Y + ++ D + +++ +I Sbjct: 155 LDERQVAELKADLLAL-----MPEGPFFYPEDYAKSD--QTFGEWVAEILREEAMKRLWH 207 Query: 259 IIPFSCAFE-RLLADMPPDEAAKYCAE-NQIASVIPKIIKTG 298 +P++ A + +A+ + Y + K I G Sbjct: 208 EVPYAVATKVEEVAE--RENGVLYIKAILYVERPSQKAIVIG 247 >2GJ9-A nrPDB Length = 172 Score = 44.0 bits (102), Expect = 1e-04, Method: Composition-based stats. Identities = 34/149 (22%), Positives = 47/149 (31%), Gaps = 26/149 (17%) Query: 22 SSH-LKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPDERFDWLCQLY 80 SH +K+ I G PN GKS+ N + + D L + Sbjct: 1 GSHGMKVVIAGRPNAGKSSLLNALAGREAAI-------------VTDIAGTTRDVLREHI 47 Query: 81 KPKSEVSAYLEINDIAGLVRGAHAGEGLGN-AFLSHIRAVDGIFHVLRAFEDKEVTHIDD 139 L I D AGL + E +G I D + ++ D Sbjct: 48 HIDG---MPLHIIDTAGLREASDEVERIGIERAWQEIEQADRVLFMVDGTT-------TD 97 Query: 140 SVDPVRDL-ETIGEELRLKDIEFVQNKID 167 +VDP E I I V+NK D Sbjct: 98 AVDPAEIWPEFIARLPAKLPITVVRNKAD 126 >4DCU-A nrPDB Length = 456 Score = 42.5 bits (98), Expect = 3e-04, Method: Composition-based stats. Identities = 35/160 (21%), Positives = 58/160 (36%), Gaps = 37/160 (23%) Query: 22 SSHLK---IGIVGLPNVGKSTFFNIVTKLSIPA-ENFPFCTIDPNEARVYVPDERFDWLC 77 SH+ + IVG PNVGKST FN + I E+ P T D Sbjct: 18 GSHMGKPVVAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRD----------------- 60 Query: 78 QLYKPKSEVSAYLEINDIAGLVRGAHAGEGLGNA-FLSHIRAVDGIFHVLRAFEDKEVTH 136 ++Y ++ + D G+ +G+ FL+ IR I E + Sbjct: 61 RIYSSAEWLNYDFNLIDTGGI--------DIGDEPFLAQIRQQAEIA----MDEADVIIF 108 Query: 137 IDDSVDPVRDLETIGEELRL---KDIEFVQNKIDDLEKSM 173 + + + V + ++ K + NK+D+ E Sbjct: 109 MVNGREGVTAADEEVAKILYRTKKPVVLAVNKLDNTEMRA 148 Score = 34.4 bits (77), Expect = 0.090, Method: Composition-based stats. Identities = 28/149 (18%), Positives = 52/149 (34%), Gaps = 33/149 (22%) Query: 29 IVGLPNVGKSTFFNI-VTKLSIPAENFPFCTIDPNEARVYVPDERFDWLCQLYKPKSEVS 87 ++G PNVGKS+ N + + + N T D + + F Sbjct: 200 LIGRPNVGKSSLVNAMLGEERVIVSNVAGTTRDAVDTSFTYNQQEF-------------- 245 Query: 88 AYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVDGIFHVLRAFEDKEVTHI-----DDSVD 142 I D AG+ + G+ + + L+A + EV + + ++ Sbjct: 246 ---VIVDTAGMRK---KGK------VYETTEKYSVLRALKAIDRSEVVAVVLDGEEGIIE 293 Query: 143 PVRDLETIGEELRLKDIEFVQNKIDDLEK 171 + + E K + V NK D ++K Sbjct: 294 QDKRIAGYAHE-AGKAVVIVVNKWDAVDK 321 >5X4B-A nrPDB Length = 162 Score = 42.1 bits (97), Expect = 5e-04, Method: Composition-based stats. Identities = 33/152 (21%), Positives = 55/152 (36%), Gaps = 34/152 (22%) Query: 27 IGIVGLPNVGKSTFFNIVTKLSIPA-ENFPFCTIDPNEARVYVPDERFDWLCQLYKPKSE 85 + IVG PNVGKST FN + I E+ P T D ++Y Sbjct: 5 VAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRD-----------------RIYSSAEW 47 Query: 86 VSAYLEINDIAGLVRGAHAGEGLGNA-FLSHIRAVDGIFHVLRAFEDKEVTHIDDSVDPV 144 ++ + D G+ +G+ FL+ IR I E + + + + V Sbjct: 48 LNYDFNLIDTGGI--------DIGDEPFLAQIRQQAEIA----MDEADVIIFMVNGREGV 95 Query: 145 RDLETIGEELRL---KDIEFVQNKIDDLEKSM 173 + ++ K + NK+D+ E Sbjct: 96 TAADEEVAKILYRTKKPVVLAVNKLDNTEMRA 127 >5KH0-A nrPDB Length = 396 Score = 41.3 bits (95), Expect = 7e-04, Method: Composition-based stats. Identities = 40/239 (16%), Positives = 74/239 (30%), Gaps = 34/239 (14%) Query: 27 IGIVGLPNVGKSTFFNIVTKLSIPA-ENFPFCTIDPNEARVYVPDERFDWLCQLYKPKSE 85 I I G NVGKS+F N + + N T DP + + Sbjct: 11 IAITGRRNVGKSSFMNALIGQEVSIVSNVAGTTTDPVFKSMELS---------------- 54 Query: 86 VSAYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVDGIFHVLRAFEDKEVTHIDDSVDPVR 145 + + D GL + +G + I+ + V I + + Sbjct: 55 PVGPITLIDTPGL-------DDVGELGIKRIKKAKKSLYRADC-GILIVDDIPGNFE--E 104 Query: 146 DLETIGEELRLKDIEFVQNKIDDLEKSMKRSNDKQLKLEHELCEKVKAHLED--GKDVRF 203 + + +EL + NKID ++ K+ + +K + GK + Sbjct: 105 QIIKLFKELEI-PYFIAINKIDTIDHENIEKEYKKYNVPILKVSALKKIGFEKIGKTINS 163 Query: 204 GDWKSADIEILNTFQLLTAKPVVYLVNMSEKDYQ--RKKNKFLPKIHAWVQEHGGETII 260 K +I L+ L+ +V LV + R + I + ++ Sbjct: 164 ILPKDDEIPYLSD--LIDGGDLVILVVPIDLGAPKGRLIMPQVHAIREGLDREALVLVV 220 >5LAD-A nrPDB Length = 404 Score = 40.9 bits (94), Expect = 0.001, Method: Composition-based stats. Identities = 39/242 (16%), Positives = 74/242 (30%), Gaps = 37/242 (15%) Query: 27 IGIVGLPNVGKSTFFNIVTKLSIPA-ENFPFCTIDPNEARVYVPDERFDWLCQLYKPKSE 85 I + G NVGKS+F N + ++ + T DP + + Sbjct: 12 IVVAGRRNVGKSSFMNALVGQNVSIVSEYAGTTTDPVYKSMEL----------------Y 55 Query: 86 VSAYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVDGIFHVLRAFEDKEVTHIDDSVDPVR 145 + + D GL G L + +F+ + D Sbjct: 56 PVGPVTLVDTPGLDDVGELGR------LR-VEKARRVFYRADCGILVTDSEPTPYED--- 105 Query: 146 DLETIGEELRLKDIEFVQNKIDDLEKSMKR-----SNDKQLKLEHELCEKVKAHLEDGKD 200 D+ + +E+ + V NKID L + + + + K+ + K + GK Sbjct: 106 DVVNLFKEMEI-PFVVVVNKIDVLGEKAEELKGLYESRYEAKVLLVSALQKKGFDDIGKT 164 Query: 201 VRFGDWKSADIEILNTFQLLTAKPVVYLVNMSEKDYQ--RKKNKFLPKIHAWVQEHGGET 258 + +I L L+ +V LV + R + I + Sbjct: 165 ISEILPGDEEIPYLGD--LIDGGDLVILVVPIDLGAPKGRLIMPQVHAIREALDREAIAL 222 Query: 259 II 260 ++ Sbjct: 223 VV 224 >3GEE-A nrPDB Length = 476 Score = 38.2 bits (87), Expect = 0.006, Method: Composition-based stats. Identities = 30/146 (20%), Positives = 43/146 (29%), Gaps = 34/146 (23%) Query: 29 IVGLPNVGKSTFFNIVTK-LSIPAENFPFCTIDPNEARVYVPDERFDWLCQLYKPKSEVS 87 I G PN GKST N + + P T D + C ++ Sbjct: 238 IAGKPNAGKSTLLNTLLGQERAIVSHMPGTTRD------------YIEECFIHDKTMF-- 283 Query: 88 AYLEINDIAGLVRGAHAGEGLGNAFLS-HIRAVDGIFHVLRAFEDKEVTHIDDSVDPVRD 146 + D AGL E G + D I ++L + + D Sbjct: 284 ---RLTDTAGLREAGEEIEHEGIRRSRMKMAEADLILYLLDL-----------GTERLDD 329 Query: 147 LETIGEELRLKDIE----FVQNKIDD 168 T EL+ V NK+D Sbjct: 330 ELTEIRELKAAHPAAKFLTVANKLDR 355 >3IEU-A nrPDB Length = 301 Score = 37.1 bits (84), Expect = 0.014, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 47/155 (30%), Gaps = 40/155 (25%) Query: 27 IGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPDERFDWLCQLYKPKSEV 86 I IVG PNVGKST N + I + R + ++ Sbjct: 11 IAIVGRPNVGKSTLLNKLLGQKISI----------TSRKAQTTRHRIVGIHTEGAYQAI- 59 Query: 87 SAYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVDGIFHVLRAFEDKEVTHIDDSVDPVR- 145 D GL H+ I ++ + ++ + V Sbjct: 60 -----YVDTPGL----------------HMEEKRAINRLMNKAASSSIGDVELVIFVVEG 98 Query: 146 -----DLETIGEELRL--KDIEFVQNKIDDLEKSM 173 D E + +LR + NK+D++++ Sbjct: 99 TRWTPDDEMVLNKLREGKAPVILAVNKVDNVQEKA 133 >3H2Y-A nrPDB Length = 368 Score = 37.1 bits (84), Expect = 0.015, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 36/104 (34%), Gaps = 27/104 (25%) Query: 26 KIGIVGLPNVGKSTFFNIV-------TKLSIPAENFPFCTIDPNEARVYVPDERFDWLCQ 78 + +VG NVGKSTF N + T+ I +FP T+D + + +E Sbjct: 162 DVYVVGCTNVGKSTFINRMIKEFSDETENVITTSHFPGTTLD--LIDIPLDEE------- 212 Query: 79 LYKPKSEVSAYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVDGI 122 + D G++ +G L I I Sbjct: 213 -----------SSLYDTPGIINHHQMAHYVGKQSLKLITPTKEI 245 >5T62-W nrPDB Length = 651 Score = 36.3 bits (82), Expect = 0.021, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%) Query: 25 LKIGIVGLPNVGKSTFFNIVTKL-SIPAENFPFCT 58 + IG+VG PNVGKS+ N + + + P T Sbjct: 337 INIGLVGYPNVGKSSTINSLVGAKKVSVSSTPGKT 371 >6N8N-W nrPDB Length = 640 Score = 36.3 bits (82), Expect = 0.022, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%) Query: 25 LKIGIVGLPNVGKSTFFNIVTKL-SIPAENFPFCT 58 + IG+VG PNVGKS+ N + + + P T Sbjct: 337 INIGLVGYPNVGKSSTINSLVGAKKVSVSSTPGKT 371 >3EC1-A nrPDB Length = 369 Score = 35.9 bits (81), Expect = 0.027, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 6/49 (12%) Query: 18 LGRFSSHLKIGIVGLPNVGKSTFFNIVTKLSIPAEN------FPFCTID 60 + R+ + +VG NVGKSTF N + + + N FP T+D Sbjct: 156 INRYREGGDVYVVGCTNVGKSTFINRIIEEATGKGNVITTSYFPGTTLD 204 >3CNO-A nrPDB Length = 262 Score = 35.9 bits (81), Expect = 0.031, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 18/52 (34%), Gaps = 1/52 (1%) Query: 8 KDAAPAERPILGRFSSHLKIGIVGLPNVGKSTFFNIVTKLSI-PAENFPFCT 58 K F ++ IVG+PN GKST N + P T Sbjct: 83 KGEPRKVLLKKLSFDRLARVLIVGVPNTGKSTIINKLKGKRASSVGAQPGIT 134 >1PUJ-A nrPDB Length = 282 Score = 35.5 bits (80), Expect = 0.035, Method: Composition-based stats. Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%) Query: 29 IVGLPNVGKSTFFNIVTKLSI-PAENFPFCT 58 I+G+PNVGKST N + K +I + P T Sbjct: 125 IIGIPNVGKSTLINRLAKKNIAKTGDRPGIT 155 >2IF2-A nrPDB Length = 204 Score = 35.5 bits (80), Expect = 0.035, Method: Composition-based stats. Identities = 30/140 (21%), Positives = 57/140 (40%), Gaps = 13/140 (9%) Query: 131 DKEVTHIDDSVDPVRDLETIGEELRLKDIEFVQNKIDDLEKSMKRSNDKQL-KLEHELCE 189 K + + ++D + + + ++ + K+ LE+ R+ K++ K+ L E Sbjct: 54 GKGILDEEGNIDRKKLADIVFKD---------EEKLRKLEEITHRALYKEIEKITKNLSE 104 Query: 190 KVKAHLEDGKDVRFGDWKSADIEILNTFQLLTAKPVVYLVNMSEKDYQRKKNKFLPKIHA 249 LE V G +K+ D I+ K MSE+D++R+ K +P I Sbjct: 105 DTLFILEASLLVEKGTYKNYDKLIVVYAPYEVCKERAIKRGMSEEDFERRWKKQMP-IEE 163 Query: 250 WVQEHGGETIIPFSCAFERL 269 V + +I S + E Sbjct: 164 KV--KYADYVIDNSGSIEET 181 >6N8J-m nrPDB Length = 486 Score = 34.8 bits (78), Expect = 0.067, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%) Query: 25 LKIGIVGLPNVGKSTFFNIVTKLSI-PAENFPFCT 58 + +G +G PN GKS+ N + K + P T Sbjct: 316 ISVGFIGYPNTGKSSIINTLRKKKVCQVAPIPGET 350 >5CER-A nrPDB Length = 401 Score = 34.4 bits (77), Expect = 0.094, Method: Composition-based stats. Identities = 31/183 (16%), Positives = 68/183 (37%), Gaps = 28/183 (15%) Query: 118 AVDGIFHVLRAFEDKEVTHIDDSVDPV--RDLE-TIGEELRLKDIEFVQN-------KID 167 + H+ H++ S DP+ R+L + EL + ++N +D Sbjct: 52 RHKTVLHLTPTANGSMDLHVEGSRDPIFGRNLSYFLISELNRMKVTKIENLTFDENFLLD 111 Query: 168 DLEKSMKRSNDKQLKLEHELCEKVKAHLEDGKD-----VRFGDWKSADIEILNTFQLLTA 222 L + R + E + ++ +A +++ K+ + + + Sbjct: 112 WLAEESPRIGGVTPRYE-TIEQQAEAVIKNLKESFSTAINRAMYSKLRERATKAKVFMLE 170 Query: 223 KPVVYLVNMSEKDYQRKKNKFLPKIHAWVQEHGGETIIPFSCAFERLLADMPPDEAAKYC 282 KP + + N+S FLPK + ++ G ++ S +L M +++ Y Sbjct: 171 KPTIEVRNIS----------FLPKNNYKKDKYTGSVVLQ-SAPLRTILKRMN-NQSNNYI 218 Query: 283 AEN 285 A+N Sbjct: 219 ADN 221 >6G12-A nrPDB Length = 301 Score = 34.4 bits (77), Expect = 0.095, Method: Composition-based stats. Identities = 17/31 (54%), Positives = 19/31 (61%), Gaps = 1/31 (3%) Query: 29 IVGLPNVGKSTFFNIVTKLSI-PAENFPFCT 58 IVG+PNVGKST N + K SI N P T Sbjct: 132 IVGIPNVGKSTLINKLAKRSIAQTGNKPGVT 162 >6FT6-s nrPDB Length = 520 Score = 34.4 bits (77), Expect = 0.095, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 15/24 (62%) Query: 21 FSSHLKIGIVGLPNVGKSTFFNIV 44 + +G++G PNVGKS+ N + Sbjct: 277 LKRSIVVGVIGYPNVGKSSVINAL 300 >5UCV-A nrPDB Length = 217 Score = 33.6 bits (75), Expect = 0.14, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 66/181 (36%), Gaps = 31/181 (17%) Query: 21 FSSHLKIGIVGLPNVGKSTFFNIVTK--LSIPAENFPFCTIDPNEARVYVPDERFDWLCQ 78 + L+I VG N GKS+ N +T P T + + + F Sbjct: 28 PDTPLEIAFVGRSNAGKSSAINTLTNHVRLAYVSKTPGRT--QHINFFELQNGNFMVDLP 85 Query: 79 LYKPKSEVSAYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVDGIFHVLRAFEDKEVTHID 138 Y + VR AH LG+ +L H + + G+ ++ A H Sbjct: 86 GYGY----------AQVPEAVR-AHWVNLLGD-YLRHRKQLIGLVLIMDA------RHPL 127 Query: 139 DSVDPVRDLETIGEELRLKDIEFVQNKIDDLEKSMKRSNDKQLKLEHELCEKVKAHLEDG 198 +D +R L+ + + + +K D L K ++Q+K ++ + +K + + Sbjct: 128 KELD-IRMLDFFHT--TGRPVHILLSKADKLSK------NEQIKTLSQVKKLLKPYSDRQ 178 Query: 199 K 199 Sbjct: 179 N 179 >3T5D-A nrPDB Length = 274 Score = 32.5 bits (72), Expect = 0.38, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 25/75 (33%), Gaps = 17/75 (22%) Query: 29 IVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPDERFDWLCQLYKPK----- 83 +VG +GKST N + + + +P P R Q+ + K Sbjct: 13 VVGESGLGKSTLINSLFLTDLYSPEYPG------------PSHRIKKTVQVEQSKVLIKE 60 Query: 84 SEVSAYLEINDIAGL 98 V L I D G Sbjct: 61 GGVQLLLTIVDTPGF 75 >4A2I-V nrPDB Length = 277 Score = 32.1 bits (71), Expect = 0.47, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 34/103 (33%), Gaps = 15/103 (14%) Query: 1 MPPKASKKDAAPAERPILGRFSSHLKIGIVGLPNVGKSTFFNIVTKLSIPAEN------F 54 M ++ P E + GR S G VGKS+ N + L + Sbjct: 142 MVSSHTQDGLKPLEEALTGRISIFA-----GQSGVGKSSLLNALLGLQNEILTNTAARLY 196 Query: 55 PFCTIDPNEARVYVPDERFDWLCQLYKPKSEVSAYLEINDIAG 97 F P+ V ++ +P+ ++E +D G Sbjct: 197 HF----PHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLG 235 >4BAS-A nrPDB Length = 199 Score = 32.1 bits (71), Expect = 0.49, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 55/162 (33%), Gaps = 28/162 (17%) Query: 9 DAAPAERPILGRFSSHLKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYV 68 ++ +G+ + L++ + GL N GK+T N V + T+ N Sbjct: 2 GSSHHHHHHMGQSKTKLQVVMCGLDNSGKTTIINQVKPAQ-SSSKHITATVGYNVETFE- 59 Query: 69 PDERFDWLCQLYKPKSEVSAYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVDGIFHVLRA 128 K V+ + D+ G A GL + +I D + V+ + Sbjct: 60 --------------KGRVA--FTVFDMGG----AKKFRGLWETYYDNI---DAVIFVVDS 96 Query: 129 FEDKEVTHIDDSVDPVRDLETIGEEL---RLKDIEFVQNKID 167 + + + + + E I EL F NK+D Sbjct: 97 SDHLRLCVVKSEIQAMLKHEDIRRELPGGGRVPFLFFANKMD 138 >5AR1-A nrPDB Length = 303 Score = 31.7 bits (70), Expect = 0.61, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 24/77 (31%), Gaps = 3/77 (3%) Query: 22 SSHLKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPDERFDWLCQLYK 81 + IVG G+STF N T + + P + + D + + Sbjct: 25 GITFTVMIVGQSGSGRSTFIN--TLCGQQVVDTSTTILLPTDTSTEI-DLQLREETVELE 81 Query: 82 PKSEVSAYLEINDIAGL 98 V L I D G Sbjct: 82 DDEGVKIQLNIIDTPGF 98 >5DE3-A nrPDB Length = 169 Score = 31.7 bits (70), Expect = 0.62, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 52/146 (35%), Gaps = 33/146 (22%) Query: 25 LKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPDERFDWLCQLYKPKS 84 +I ++GL N GK+T +++ I TI P + K S Sbjct: 1 ARILVLGLDNAGKTTILKALSEEDI-------TTITPTQG-------------FNIKSLS 40 Query: 85 EVSAYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVDGIFHVLRAFEDKEVTHIDDSVDPV 144 L+I DI G + + + ++ D + +V+ + + K ++ + Sbjct: 41 RDGFNLKIWDIGG-------QKSIRPYWRNYFDQTDALIYVIDSADSKRLSESE-----F 88 Query: 145 RDLETIGEELRLKDIEFVQ-NKIDDL 169 E + EE V NK D + Sbjct: 89 ELTELLQEEKMTGVPLLVFANKQDLV 114 >6QUZ-A nrPDB Length = 587 Score = 30.9 bits (68), Expect = 0.86, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 28/76 (36%), Gaps = 15/76 (19%) Query: 20 RFSSHLKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVP--DERFDWLC 77 + S + ++G GKST N++ +L IDP RV V D R L Sbjct: 367 KPGSL--VAVLGETGSGKSTLMNLIPRL-----------IDPERGRVEVDELDVRTVKLK 413 Query: 78 QLYKPKSEVSAYLEIN 93 L S V + Sbjct: 414 DLRGHISAVPQETVLF 429 >5U04-A nrPDB Length = 598 Score = 30.9 bits (68), Expect = 0.87, Method: Composition-based stats. Identities = 17/109 (15%), Positives = 34/109 (31%), Gaps = 16/109 (14%) Query: 119 VDGIFHVLRAFEDKEVTHIDDSVDPVRDLETIGEELRLKDIEFVQNKIDDLEKSMKRSND 178 + + ++R E +EV + D + +R E + N D L++ +D Sbjct: 310 TNLVVQLIRNMEAEEVLEMQD-LWLLRKPEKVTR-------WLQSNGWDRLKRMAVSGDD 361 Query: 179 KQLKLEHELCEKVKAHLEDGKDVRF--------GDWKSADIEILNTFQL 219 +K + L D VR W + + + Sbjct: 362 CVVKPIDDRFAHALRFLNDMGKVRKDTQEWKPSTGWSNWEEVPFCSHHF 410 >2QAG-C nrPDB Length = 418 Score = 30.9 bits (68), Expect = 0.94, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 25/75 (33%), Gaps = 17/75 (22%) Query: 29 IVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPDERFDWLCQLYKPK----- 83 +VG +GKST N + + + +P P R Q+ + K Sbjct: 36 VVGESGLGKSTLINSLFLTDLYSPEYPG------------PSHRIKKTVQVEQSKVLIKE 83 Query: 84 SEVSAYLEINDIAGL 98 V L I D G Sbjct: 84 GGVQLLLTIVDTPGF 98 >4LV5-B nrPDB Length = 423 Score = 30.9 bits (68), Expect = 1.0, Method: Composition-based stats. Identities = 41/261 (15%), Positives = 79/261 (30%), Gaps = 58/261 (22%) Query: 22 SSHLKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPDERFDWLCQLYK 81 SS L + + G GKS+F N + + E V V ER + Sbjct: 77 SSVLNVAVTGETGSGKSSFINTLRGIGNEEEG------AAKTGVVEVTMER-------HP 123 Query: 82 PKSEVSAYLEINDIAG-----------------------LVRGAHAGEGLGNAFLSHIRA 118 K + D+ G ++ A + I Sbjct: 124 YKHPNIPNVVFWDLPGIGSTNFPPNTYLEKMKFYEYDFFIIISATRFKKNDIDIAKAISM 183 Query: 119 VDGIFHVLRAFEDKEVTHIDDSVDPVRDLETIGEELRLKDIEFVQNKIDDLEKSMKRSND 178 + F+ +R D ++T+ D D E + +++RL N ++ ++ Sbjct: 184 MKKEFYFVRTKVDSDITNEADGKPQTFDKEKVLQDIRL-------NCVNTFRENGIAEPP 236 Query: 179 KQLKLEHELCEKVKAHLEDGKDVRFGDWKSADIEILNTFQLLTAKPVVYLVNMSEKDYQR 238 L +C L D K + +D+ I + + P + D Sbjct: 237 IFLLSNKNVCHYDFPVLMD-KLI-------SDLPIYKRHNFMVSLPNI-------TDSVI 281 Query: 239 KKNKFLPKIHAWVQEHGGETI 259 +K + K W++ + + Sbjct: 282 EKKRQFLKQRIWLEGFAADLV 302 >2QJL-A nrPDB Length = 99 Score = 30.9 bits (68), Expect = 1.0, Method: Composition-based stats. Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%) Query: 367 YRQEG-KTYVVQDGDIIFFKFNVSGG 391 + EG K Y+++DGDII F + GG Sbjct: 74 WELEGEKDYILEDGDIISFTSTLHGG 99 >3NXS-A nrPDB Length = 329 Score = 30.9 bits (68), Expect = 1.0, Method: Composition-based stats. Identities = 10/25 (40%), Positives = 14/25 (56%) Query: 20 RFSSHLKIGIVGLPNVGKSTFFNIV 44 S + +GI G+P VGKST + Sbjct: 53 EAGSAMHVGITGVPGVGKSTTIEAL 77 >5LZD-z nrPDB Length = 614 Score = 30.9 bits (68), Expect = 1.1, Method: Composition-based stats. Identities = 56/291 (19%), Positives = 99/291 (34%), Gaps = 33/291 (11%) Query: 25 LKIGIVGLPNVGKSTFFNIVTKLSI---PAENFPFCTIDPNEARVYVPDER---FDWLCQ 78 + I G + GK+T +T ++ P E TID A PD R F + Sbjct: 1 MIIATAGHVDHGKTTLLQAITGVNADRLPEEKKRGMTIDLGYAYWPQPDGRVPGFIDVPG 60 Query: 79 LYKPKSEVSAYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVDGIFHVLRAFEDKEVTHID 138 K S + A + D A LV G ++ R I + Sbjct: 61 HEKFLSNMLAGVGGIDHALLVVACDDGV------MAQTREHLAILQLTGNPMLTVALTKA 114 Query: 139 DSVDP--VRDLETIGEELRLKDIEFVQNKIDDLEKSMKRSND--KQLKLEHELCEKVKAH 194 D VD V ++E +E+ L++ F + K+ + R D ++ L+ E H Sbjct: 115 DRVDEARVDEVERQVKEV-LREYGFAEAKLFITAATEGRGMDALREHLLQLPEREHASQH 173 Query: 195 -----------LEDGKDVRFGDWKSADIEILNTFQLL-TAKPVVYLVNMSEKDYQRKKNK 242 ++ V G S ++++ ++ L KP+ ++ N Sbjct: 174 SFRLAIDRAFTVKGAGLVVTGTALSGEVKVGDSLWLTGVNKPMRVRALHAQNQPTETAN- 232 Query: 243 FLPKIHAWVQEHGGETIIPFSCAFERLLADMPPDEAAKYCAENQIASVIPK 293 G+ + LLAD+PP+ + E Q + + + Sbjct: 233 ---AGQRIALNIAGDAEKEQINRGDWLLADVPPEPFTRVIVELQTHTPLTQ 280 >4Q7K-A nrPDB Length = 250 Score = 30.5 bits (67), Expect = 1.1, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 28/76 (36%), Gaps = 15/76 (19%) Query: 20 RFSSHLKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVP--DERFDWLC 77 + S + ++G GKST N++ +L IDP RV V D R L Sbjct: 29 KPGSL--VAVLGETGSGKSTLMNLIPRL-----------IDPERGRVEVDELDVRTVKLK 75 Query: 78 QLYKPKSEVSAYLEIN 93 L S V + Sbjct: 76 DLRGHISAVPQETVLF 91 >2P67-A nrPDB Length = 341 Score = 30.5 bits (67), Expect = 1.1, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 13/22 (59%) Query: 22 SSHLKIGIVGLPNVGKSTFFNI 43 + L++G+ G P GKSTF Sbjct: 54 GNTLRLGVTGTPGAGKSTFLEA 75 >5E9H-A nrPDB Length = 554 Score = 30.5 bits (67), Expect = 1.4, Method: Composition-based stats. Identities = 19/112 (16%), Positives = 40/112 (35%), Gaps = 8/112 (7%) Query: 38 STFFNIVTKLSIPAENFPFCTIDPNEARVYVPD---ERFDWLCQLYKPKSEVSAYLEIND 94 S+ + + ++P+ T+ +++ +R +L PK + + L I+ Sbjct: 111 SSTASASDEPGPDLADYPYTTVPNKVGHLFMAQLFHDRKQRQERLSVPKEQRANLLNIDY 170 Query: 95 IAGLVRGAHAGEGLGNAFLS----HIRAVDGIFHVLRAFED-KEVTHIDDSV 141 + +V A G G A + I H+ K+ H+ V Sbjct: 171 LRPIVADADTGHGGLTAVMKLTKLFIEKGAAGIHIEDQAPGTKKCGHMAGKV 222 >2CXX-A nrPDB Length = 190 Score = 30.1 bits (66), Expect = 1.6, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 54/162 (33%), Gaps = 17/162 (10%) Query: 31 GLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPDERFDWLCQLYKPKSEVSAYL 90 G NVGKST +T + P T + + + + + Sbjct: 8 GRSNVGKSTLIYRLTGKKVRRGKRPGVT--RKIIEIEWKNHKIIDM----------PGFG 55 Query: 91 EINDIAGLVRGAHAGEGLGNAFLSHIRAVDGIFHVLRAFEDKEVT-HIDDSVDPVRDLET 149 + + V+ E + + + + +D V+ E+ + + D+E Sbjct: 56 FMMGLPKEVQERIKDE-IVHFIEDNAKNIDVAVLVVDGKAAPEIIKRWEKRGEIPIDVEF 114 Query: 150 IG--EELRLKDIEFVQNKIDDLEKSMKRSNDKQLKLEHELCE 189 EL + I V NK+D ++ + N K E L E Sbjct: 115 YQFLRELDIPTIVAV-NKLDKIKNVQEVINFLAEKFEVPLSE 155 >4FIN-A nrPDB Length = 555 Score = 30.1 bits (66), Expect = 1.7, Method: Composition-based stats. Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 4/45 (8%) Query: 12 PAERPILGRFSSHL----KIGIVGLPNVGKSTFFNIVTKLSIPAE 52 P +R IL S KIG++GL GKST I+ + E Sbjct: 16 PPKRHILKNISLSFFPGAKIGVLGLNGAGKSTLLRIMAGIDKDIE 60 >4EEC-A nrPDB Length = 286 Score = 30.1 bits (66), Expect = 1.7, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 28/73 (38%), Gaps = 3/73 (4%) Query: 294 IIKTGFAAIHLIYFFTAGPDEVKCWQIRRQTKAPQAA--GTIHTDFERGFICAEVMKFDD 351 I GF+++ + + P+ ++ W P AA + D + E+ K D Sbjct: 137 IADEGFSSVRIWAGEGSWPENIRSWTDSVHESFPNAAVLAVRYEDLRKD-PEGELWKVVD 195 Query: 352 LKELGSESAVKAA 364 ELG V A Sbjct: 196 FLELGGRDGVADA 208 >4JYC-A nrPDB Length = 337 Score = 30.1 bits (66), Expect = 1.8, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 4/40 (10%) Query: 17 ILGRFSSHLKIGIVGLPNVGKSTFFNI----VTKLSIPAE 52 +L + +++GI G+P VGKST + +T Sbjct: 48 VLPQTGRAIRVGITGVPGVGKSTTIDALGSLLTAAGHKVA 87 >4MKI-B nrPDB Length = 298 Score = 30.1 bits (66), Expect = 1.9, Method: Composition-based stats. Identities = 44/251 (17%), Positives = 79/251 (31%), Gaps = 24/251 (9%) Query: 27 IGIVGLPNVGKSTFFNIVTK-LSIPAENFPFCTIDPNEARVYVPDERFDWLCQLYKPKSE 85 +GI+G GKST + L ID + +V + D R P+ + Sbjct: 40 VGIIGHTGSGKSTLIQQLNGLLKPSKGKIYINGIDITDKKVSLKDIRKQVGLVFQYPEYQ 99 Query: 86 VSAYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVDGIFHVLRAFEDKEVTHIDDSVDPVR 145 + DI A LG + + V A E ++ P Sbjct: 100 LFEETVFKDI------AFGPSNLG------LSEEEVKERVYEAMEIVGISKELADKSPFE 147 Query: 146 DLETIGEELRLKDIEFVQNKIDDLEKSMKRSNDKQLKLEHELCEKVKAHLEDGKDVR-FG 204 + + I ++ KI L++ + K E+ K+K + K + Sbjct: 148 LSGGQKRRVAIAGILAMRPKILILDEPTAGLDPKGK---QEILNKIKEIHDKYKMITILV 204 Query: 205 DWKSADIEILNTFQLLTAKPVVYLVNM-----SEKDYQRKKNKFLPKIHAWVQE--HGGE 257 DI + ++ + + L+ E + K +P+I + +E G Sbjct: 205 SHNMEDIARIADKIIVMNRGKIELIGTPREVFREAERLEKIGLSVPQITSLARELRKRGV 264 Query: 258 TIIPFSCAFER 268 I P E Sbjct: 265 PIPPDVLTIEE 275 >3NIP-A nrPDB Length = 326 Score = 30.1 bits (66), Expect = 1.9, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 4/65 (6%) Query: 331 GTIHTDFERGFICA---EVMKFDDLKELGSESAVKAAGKYRQEGKTYVVQDGDIIFFKFN 387 G++++ + F V+ ++ ELG E+ + A + G TYV D D++ F Sbjct: 190 GSVYSPDDDAFARECGIRVIHMEEFVELGVEATLAEARRVVGAGPTYVSFDVDVLDPAF- 248 Query: 388 VSGGG 392 G G Sbjct: 249 APGTG 253 >6CUM-A nrPDB Length = 315 Score = 29.8 bits (65), Expect = 2.1, Method: Composition-based stats. Identities = 26/127 (20%), Positives = 44/127 (34%), Gaps = 13/127 (10%) Query: 27 IGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPDERFDWLCQLYKPKSEV 86 IG+ G P GKST + A + V L + + Sbjct: 71 IGVTGPPGAGKSTTVGAMVGAYRERG--------LRVAVLAVDPSSPYSGGALLGDRIRM 122 Query: 87 SAYLEINDIAGLVRG-AHAGE--GLGNAFLSHIRAVDGIFHVLRAFEDKEVTHIDDSVDP 143 +A++ D+ L+R A G GL A + IR + + + L E V + + Sbjct: 123 AAHINDPDV--LIRSMAARGHLGGLAAAVPAAIRLLAALSYDLIVLETVGVGQSEIEIAA 180 Query: 144 VRDLETI 150 + D + Sbjct: 181 IADPTVV 187 >3GP8-A nrPDB Length = 574 Score = 29.8 bits (65), Expect = 2.3, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 21/42 (50%) Query: 3 PKASKKDAAPAERPILGRFSSHLKIGIVGLPNVGKSTFFNIV 44 PK ++K + + +L + + H + + G P GKST V Sbjct: 183 PKKARKGLSEEQASVLDQLAGHRLVVLTGGPGTGKSTTTKAV 224 >1IY1-A nrPDB Length = 254 Score = 29.8 bits (65), Expect = 2.5, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 31/82 (37%), Gaps = 7/82 (8%) Query: 29 IVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEAR---VYVPDERFDWLCQLYKPKSE 85 +VG P VGK+ V PF T ++ V V R L + K + Sbjct: 54 LVGPPGVGKTHLARAVAGE----ARVPFITASGSDFVEMFVGVGAARVRDLFETAKRHAP 109 Query: 86 VSAYLEINDIAGLVRGAHAGEG 107 +++ D G RG+ G G Sbjct: 110 CIVFIDEIDAVGRKRGSGVGGG 131 >2DHR-A nrPDB Length = 499 Score = 29.4 bits (64), Expect = 2.6, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 31/82 (37%), Gaps = 7/82 (8%) Query: 29 IVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEAR---VYVPDERFDWLCQLYKPKSE 85 +VG P VGK+ V PF T ++ V V R L + K + Sbjct: 69 LVGPPGVGKTHLARAVAGE----ARVPFITASGSDFVEMFVGVGAARVRDLFETAKRHAP 124 Query: 86 VSAYLEINDIAGLVRGAHAGEG 107 +++ D G RG+ G G Sbjct: 125 CIVFIDEIDAVGRKRGSGVGGG 146 >3PR1-A nrPDB Length = 195 Score = 29.4 bits (64), Expect = 3.1, Method: Composition-based stats. Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 1/34 (2%) Query: 26 KIGIVGLPNVGKSTFFNIVTKLSI-PAENFPFCT 58 ++ VG NVGKS+ N + I P T Sbjct: 25 EVAFVGRSNVGKSSLLNALFNRKIAFVSKTPGKT 58 >3UGV-A nrPDB Length = 390 Score = 29.0 bits (63), Expect = 3.9, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 38/114 (33%), Gaps = 12/114 (10%) Query: 1 MPPKASKKDAAPAERPILGRFSSHLKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTID 60 M + + APAE R S H +G GL + S V A N P CT+ Sbjct: 93 MSDMLAGQPLAPAEIYDKTRKSLHF-VGYAGLSMIAASGVDMAVWDALARAANMPLCTL- 150 Query: 61 PNEARVYVPDERFDWLCQLYKPKSEVSAYLEINDIAGLVRGAHAGEGLGNAFLS 114 + ++ K +EV+A V G+G G L Sbjct: 151 --LGGTPGSVKAYNSNGLWLKSPAEVAAEA--------VELKAEGQGTGFKGLK 194 >1TWI-A nrPDB Length = 434 Score = 28.6 bits (62), Expect = 4.7, Method: Composition-based stats. Identities = 11/41 (26%), Positives = 20/41 (48%) Query: 231 MSEKDYQRKKNKFLPKIHAWVQEHGGETIIPFSCAFERLLA 271 MSE+ + N+++ W +E G E I+ ++ LA Sbjct: 35 MSEEQIKINYNRYIEAFKRWEEETGKEFIVAYAYKANANLA 75 >5W76-A nrPDB Length = 385 Score = 28.2 bits (61), Expect = 6.1, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 32/93 (34%), Gaps = 8/93 (8%) Query: 22 SSHLKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPDERFDWLCQLYK 81 H+ IG +G + GK+T +TK+ F D + ER + + Sbjct: 2 KPHVNIGTIGHVDHGKTTLTAAITKVLAEKGQAEFKAYD-QIDKAPEEKERGITISTAHV 60 Query: 82 PKSEVSAYLEINDIAG-------LVRGAHAGEG 107 + + D G ++ GA +G Sbjct: 61 EYETENRHYAHVDCPGHADYVKNMITGAAQMDG 93 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.306 0.124 0.312 Lambda K H 0.267 0.0383 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 13,623,562 Number of Sequences: 36641 Number of extensions: 524484 Number of successful extensions: 2041 Number of sequences better than 10.0: 84 Number of HSP's better than 10.0 without gapping: 98 Number of HSP's successfully gapped in prelim test: 47 Number of HSP's that attempted gapping in prelim test: 1878 Number of HSP's gapped (non-prelim): 164 length of query: 394 length of database: 10,336,785 effective HSP length: 99 effective length of query: 295 effective length of database: 6,709,326 effective search space: 1979251170 effective search space used: 1979251170 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 60 (27.8 bits)