BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q6XQN6 (538 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 4YUB-A nrPDB 1061 0.0 2F7F-A nrPDB 253 2e-67 2I14-A nrPDB 74 1e-13 1YTE-A nrPDB 64 2e-10 1VLP-A nrPDB 35 0.068 2XZ9-A nrPDB 34 0.19 4PXO-A nrPDB 32 0.67 1E6B-A nrPDB 32 0.68 1YIR-A nrPDB 30 1.8 2JL4-A nrPDB 30 2.5 4TSM-A nrPDB 29 5.7 2P8E-A nrPDB 28 8.4 >4YUB-A nrPDB Length = 538 Score = 1061 bits (2744), Expect = 0.0, Method: Compositional matrix adjust. Identities = 538/538 (100%), Positives = 538/538 (100%) Query: 1 MAAEQDPEARAAARPLLTDLYQATMALGYWRAGRARDAAEFELFFRRCPFGGAFALAAGL 60 MAAEQDPEARAAARPLLTDLYQATMALGYWRAGRARDAAEFELFFRRCPFGGAFALAAGL Sbjct: 1 MAAEQDPEARAAARPLLTDLYQATMALGYWRAGRARDAAEFELFFRRCPFGGAFALAAGL 60 Query: 61 RDCVRFLRAFRLRDADVQFLASVLPPDTDPAFFEHLRALDCSEVTVRALPEGSLAFPGVP 120 RDCVRFLRAFRLRDADVQFLASVLPPDTDPAFFEHLRALDCSEVTVRALPEGSLAFPGVP Sbjct: 61 RDCVRFLRAFRLRDADVQFLASVLPPDTDPAFFEHLRALDCSEVTVRALPEGSLAFPGVP 120 Query: 121 LLQVSGPLLVVQLLETPLLCLVSYASLVATNAARLRLIAGPEKRLLEMGLRRAQGPDGGL 180 LLQVSGPLLVVQLLETPLLCLVSYASLVATNAARLRLIAGPEKRLLEMGLRRAQGPDGGL Sbjct: 121 LLQVSGPLLVVQLLETPLLCLVSYASLVATNAARLRLIAGPEKRLLEMGLRRAQGPDGGL 180 Query: 181 TASTYSYLGGFDSSSNVLAGQLRGVPVAGTLAHSFVTSFSGSEVPPDPMLAPAAGEGPGV 240 TASTYSYLGGFDSSSNVLAGQLRGVPVAGTLAHSFVTSFSGSEVPPDPMLAPAAGEGPGV Sbjct: 181 TASTYSYLGGFDSSSNVLAGQLRGVPVAGTLAHSFVTSFSGSEVPPDPMLAPAAGEGPGV 240 Query: 241 DLAAKAQVWLEQVCAHLGLGVQEPHPGERAAFVAYALAFPRAFQGLLDTYSVWRSGLPNF 300 DLAAKAQVWLEQVCAHLGLGVQEPHPGERAAFVAYALAFPRAFQGLLDTYSVWRSGLPNF Sbjct: 241 DLAAKAQVWLEQVCAHLGLGVQEPHPGERAAFVAYALAFPRAFQGLLDTYSVWRSGLPNF 300 Query: 301 LAVALALGELGYRAVGVRLDSGDLLQQAQEIRKVFRAAAAQFQVPWLESVLIVVSNNIDE 360 LAVALALGELGYRAVGVRLDSGDLLQQAQEIRKVFRAAAAQFQVPWLESVLIVVSNNIDE Sbjct: 301 LAVALALGELGYRAVGVRLDSGDLLQQAQEIRKVFRAAAAQFQVPWLESVLIVVSNNIDE 360 Query: 361 EALARLAQEGSEVNVIGIGTSVVTCPQQPSLGGVYKLVAVGGQPRMKLTEDPEKQTLPGS 420 EALARLAQEGSEVNVIGIGTSVVTCPQQPSLGGVYKLVAVGGQPRMKLTEDPEKQTLPGS Sbjct: 361 EALARLAQEGSEVNVIGIGTSVVTCPQQPSLGGVYKLVAVGGQPRMKLTEDPEKQTLPGS 420 Query: 421 KAAFRLLGSDGSPLMDMLQLAEEPVPQAGQELRVWPPGAQEPCTVRPAQVEPLLRLCLQQ 480 KAAFRLLGSDGSPLMDMLQLAEEPVPQAGQELRVWPPGAQEPCTVRPAQVEPLLRLCLQQ Sbjct: 421 KAAFRLLGSDGSPLMDMLQLAEEPVPQAGQELRVWPPGAQEPCTVRPAQVEPLLRLCLQQ 480 Query: 481 GQLCEPLPSLAESRALAQLSLSRLSPEHRRLRSPAQYQVVLSERLQALVNSLCAGQSP 538 GQLCEPLPSLAESRALAQLSLSRLSPEHRRLRSPAQYQVVLSERLQALVNSLCAGQSP Sbjct: 481 GQLCEPLPSLAESRALAQLSLSRLSPEHRRLRSPAQYQVVLSERLQALVNSLCAGQSP 538 >2F7F-A nrPDB Length = 494 Score = 253 bits (645), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 167/516 (32%), Positives = 259/516 (50%), Gaps = 71/516 (13%) Query: 16 LLTDLYQATMALGYWRAGRARDAAEFELFFRRCPFGGAFALAAGLRDCVRFLRAFRLRDA 75 L TD+YQ M YW GRA A FE +FR PF +A+ AGL V +L ++ Sbjct: 12 LHTDMYQINMMQTYWELGRADLHAVFECYFREMPFNHGYAIFAGLERLVNYLENLTFTES 71 Query: 76 DVQFLASV--LPPDTDPAFFEHLRALDCSEVTVRALPEGSLAFPGVPLLQVSGPLLVVQL 133 D+ +L V P D F +L + + TVR+ EG L F PL+Q+ GPL QL Sbjct: 72 DIAYLREVEEYPED----FLTYLANFEF-KCTVRSALEGDLVFNNEPLIQIEGPLAQCQL 126 Query: 134 LETPLLCLVSYASLVATNAARLRLIAGPEKRLLEMGLRRAQGPDGGLTASTYSYLGGFDS 193 +ET LL +V++ +L+AT AAR++ + G + LLE G RRAQ D + + +Y+GG D+ Sbjct: 127 VETALLNMVNFQTLIATKAARIKSVIGDDP-LLEFGTRRAQELDAAIWGTRAAYIGGADA 185 Query: 194 SSNVLAGQLRGVPVAGTLAHSFVTSFSGSEVPPDPMLAPAAGEGPGVDLAAKAQVWLEQV 253 +SNV AG++ G+PV+GT AHS V S+ Sbjct: 186 TSNVRAGKIFGIPVSGTHAHSLVQSYG--------------------------------- 212 Query: 254 CAHLGLGVQEPHPGERAAFVAYALAFPRAFQGLLDTYSVWRSGLPNFLAVALALGELGYR 313 + AF+AYA R L+DTY ++G+P+ + VA +G+ Sbjct: 213 -------------NDYEAFMAYAKT-HRDCVFLVDTYDTLKAGVPSAIRVAREMGD-KIN 257 Query: 314 AVGVRLDSGDLLQQAQEIRKVFRAAAAQFQVPWLESVLIVVSNNIDEEALARLAQEGSEV 373 +GVR+DSGD+ ++ +R+ A I SN++DE + L + S++ Sbjct: 258 FLGVRIDSGDMAYISKRVREQLDEAG-------FTEAKIYASNDLDENTILNLKMQKSKI 310 Query: 374 NVIGIGTSVVTCPQQPSLGGVYKLVAVGGQ-----PRMKLTEDPEKQTLPGSKAAFRLL- 427 +V G+GT ++T QP+LG V+KLV++ G+ +KL+ + EK T PG K +R+ Sbjct: 311 DVWGVGTKLITAYDQPALGAVFKLVSIEGEDGQMKDTIKLSSNAEKVTTPGKKQVWRITR 370 Query: 428 GSDGSPLMDMLQLAEEPVPQAGQELRVWPP-GAQEPCTVRPAQVEPLLRLCLQQGQLCEP 486 SD D + L E P+ +E+ ++ P VR + P+L+ +G+ Sbjct: 371 KSDKKSEGDYVTLWNED-PRQEEEIYMFHPVHTFINKYVRDFEARPVLQDIFVEGKRVYE 429 Query: 487 LPSLAESRALAQLSLSRLSPEHRRLRSPAQYQVVLS 522 LP+L E + A+ +L L E++R +P +Y V LS Sbjct: 430 LPTLDEIKQYAKENLDSLHEEYKRDLNPQKYPVDLS 465 >2I14-A nrPDB Length = 395 Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 97/392 (24%), Positives = 158/392 (40%), Gaps = 88/392 (22%) Query: 104 VTVRALPEGSLAFPGVPLLQVSGPLLVVQLLETPLLCLVSYASLVATNAARLRLIAGPEK 163 V V A+PEG++ P P+LQ+ G + ET LL ++S AS +AT A R++ IA K Sbjct: 77 VNVYAMPEGTIFHPYEPVLQIEGDYADFGIYETALLGMLSQASGIATAALRIK-IAAKFK 135 Query: 164 RLLEMGLRRAQGPDGGLTASTYSYLGGFDSSSNVLAGQLRGVPVAGTLAHSFVTSFSGSE 223 + G+R P +++GG D S VL ++ G GT+ H+ + + G + Sbjct: 136 PVYSFGIRHMH-PAIAPMIDRAAFIGGCDGVSGVLGAEMMGEKAVGTMPHALIITV-GDQ 193 Query: 224 VPPDPMLAPAAGEGPGVDLAAKAQVWLEQVCAHLGLGVQEPHPGERAAFVAYALAFPRAF 283 V KA + ++V ++E P R A Sbjct: 194 V--------------------KAWKYFDEV-------IEEEVP--RIA------------ 212 Query: 284 QGLLDTYSVWRSGLPNFLAVALALGELGYRAVGVRLDSGDLLQQAQEIRKVFRAAAAQFQ 343 L+DT+ + +A LG + VRLD+ + RK+ + + Sbjct: 213 --LVDTF------YDEKVEAVMAAEALGKKLFAVRLDTPS--SRRGNFRKIIEEVRWELK 262 Query: 344 VPWLESVLIVVSNNIDEEALARLAQEGSEVNVIGIGTSVVTC-PQQPSLGGVYKLVAVGG 402 V + V I VS +DEE + + V+ G+G ++ + P +L +V V G Sbjct: 263 VRGYDWVKIFVSGGLDEEKIKEIV---DVVDAFGVGGAIASAKPVDFAL----DIVEVEG 315 Query: 403 QPRMKLTEDPEKQTLPGSKAAFRLLGSDGSPLMDMLQLAEEPVPQAGQELRVWPPGAQEP 462 +P K + L G K +R + V A ++L E Sbjct: 316 KPIAK------RGKLSGRKQVYR------------CENGHYHVVPANKKL--------ER 349 Query: 463 CTVRPAQVEPLLRLCLQQGQLCEPLPSLAESR 494 C V A+VEPLL+ ++ G++ P E R Sbjct: 350 CPVCNAKVEPLLKPIIENGEIVVEFPKAREIR 381 >1YTE-A nrPDB Length = 398 Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 88/414 (21%), Positives = 156/414 (37%), Gaps = 95/414 (22%) Query: 94 EHLRALDCSEVTVRALPEGSLAFPG------VPLLQVSGPLLVVQLLETPLLCLVSYASL 147 E L+ L+ +V + A+PEG++ FP VP ++V G + ET +L + AS Sbjct: 65 EVLKLLEGLDVDLYAIPEGTILFPRDANGLPVPFIRVEGRYCDFGMYETAILGFICQASG 124 Query: 148 VATNAARLRLIAGPEKRLLEMGLRRAQGPDGGLTASTYSYLGGFDSSSNVLAGQLRGVPV 207 ++T A+++RL AG + G+RR P +Y+GG D S +L +L Sbjct: 125 ISTKASKVRLAAG-DSPFFSFGIRRMH-PAISPMIDRSAYIGGADGVSGILGAKLIDQDP 182 Query: 208 AGTLAHSFVTSFSGSEVPPDPMLAPAAGEGPGVDLAAKAQVWLEQVCAHLGLGVQEPHPG 267 GT+ H+ + + W L ++ G Sbjct: 183 VGTMPHALSI------------------------MLGDEEAW--------KLTLENTKNG 210 Query: 268 ERAAFVAYALAFPRAFQGLLDTYSVWRSGLPNFLAVALALGELGYRAVGVRLDSGDLLQQ 327 +++ L+DTY + F A+ +A E+ + +RLD+ + Sbjct: 211 QKSVL-------------LIDTYMDEK-----FAAIKIA--EMFDKVDYIRLDTPS--SR 248 Query: 328 AQEIRKVFRAAAAQFQVPWLESVLIVVSNNIDEEALARLAQEGSEVNVIGIGTSVVTCPQ 387 + R + + + I+VS +DE + +L + G+E G+GTS+ + Sbjct: 249 RGNFEALIREVRWELALRGRSDIKIMVSGGLDENTVKKLREAGAE--AFGVGTSISSA-- 304 Query: 388 QPSLGGVYKLVAVGGQPRMKLTEDPEKQTLPGSKAAFRLLGSDGSPLMDMLQLAEEPVPQ 447 +P +V V G+P K + + G K R Sbjct: 305 KP-FDFAMDIVEVNGKPETK------RGKMSGRKNVLRC--------------------T 337 Query: 448 AGQELRVWPPGAQEPCTVRPAQVEPLLRLCLQQGQLCE--PLPSLAESRALAQL 499 + + V P QE + ++ LL L G+ P P SR++ +L Sbjct: 338 SCHRIEVVPANVQEKTCICGGSMQNLLVKYLSHGKRTSEYPRPKEIRSRSMKEL 391 >1VLP-A nrPDB Length = 441 Score = 35.4 bits (80), Expect = 0.068, Method: Compositional matrix adjust. Identities = 88/400 (22%), Positives = 147/400 (36%), Gaps = 106/400 (26%) Query: 60 LRDCVRFLRAFRLRDADVQFLASVLP--PDTDPAFFEHLRALDCSEVTVRALPEGSLAFP 117 L++ +L R + ++++L +P P A+ +++ S + PE ++F Sbjct: 65 LKEQFSYLGNLRFTEEEIEYLKQEIPYLP---SAYIKYI-----SSSNYKLHPEEQISFT 116 Query: 118 -----GVPL-----LQVSGPLLVVQLLETPLLCLVS--YASLVATNAARLRLIAGPEK-- 163 G P + VSG L E PLL L+S Y V + + EK Sbjct: 117 SEEIEGKPTHYKLKILVSGSWKDTILYEIPLLSLISEAYFKFVDIDWDYENQLEQAEKKA 176 Query: 164 --------RLLEMGLRR----------AQGPDGGLTAS---TYSYLGGFDSSSNVLAGQL 202 R E G RR QG + + S L G +SN+L + Sbjct: 177 ETLFDNGIRFSEFGTRRRRSLKAQDLIMQGIMKAVNGNPDRNKSLLLG---TSNILFAKK 233 Query: 203 RGVPVAGTLAHSFVTSFSGSEVPPDPMLAPAAGEGPGVDLAAKAQVWLEQVCAHLGLGVQ 262 GV GT+AH +V + + D + A W+ Sbjct: 234 YGVKPIGTVAHEWVMGVAS--ISEDYLHANKNA----------MDCWINTF--------- 272 Query: 263 EPHPGERAAFVAYALAFPRAFQGLLDTYSVWRSGLPNFLAVALALGELGYRAVGVRLDSG 322 G + A +A L DT+ G +FL Y VGVR DSG Sbjct: 273 ----GAKNAGLA-----------LTDTF-----GTDDFLKSFRPPYSDAY--VGVRQDSG 310 Query: 323 DLLQQAQEIRKVFRAAAAQFQVPWLESVLIVVSNNIDEE---ALARLAQEGSEVNVIGIG 379 D ++ ++I + ++P S +I S++++ E + A+E + GIG Sbjct: 311 DPVEYTKKISHHYHDV---LKLPKF-SKIICYSDSLNVEKAITYSHAAKENGMLATFGIG 366 Query: 380 TSVVTCPQQPS--------LGGVYKLVAVGGQPRMKLTED 411 T+ ++ S L V KL+ V G +K++++ Sbjct: 367 TNFTNDFRKKSEPQVKSEPLNIVIKLLEVNGNHAIKISDN 406 >2XZ9-A nrPDB Length = 324 Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 7/78 (8%) Query: 310 LGYRAVGVRLDSGDLLQQAQEIRKVFRAAA---AQFQVPWLESVLIV-VSNNIDEEALAR 365 LGYRA+ + LD D+ + ++R + RA+A Q P + SV V +N+I EE A Sbjct: 106 LGYRAIRLCLDRPDIFK--TQLRAILRASAYGNVQIMYPMISSVEEVRKANSILEEVKAE 163 Query: 366 LAQEGSEVNV-IGIGTSV 382 L +EG + + I +G V Sbjct: 164 LDREGVKYDKEIKVGIMV 181 >4PXO-A nrPDB Length = 238 Score = 32.0 bits (71), Expect = 0.67, Method: Compositional matrix adjust. Identities = 15/41 (36%), Positives = 22/41 (53%) Query: 283 FQGLLDTYSVWRSGLPNFLAVALALGELGYRAVGVRLDSGD 323 FQ ++ Y WRS + +AL L + Y V + LD+GD Sbjct: 20 FQSMVKMYGNWRSAAAFRVRIALNLKGIAYEEVFLDLDAGD 60 >1E6B-A nrPDB Length = 221 Score = 32.0 bits (71), Expect = 0.68, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 2/48 (4%) Query: 287 LDTYSVWRSGLPNFLAVALALGELGYRAVGVRLDSGDLLQQAQEIRKV 334 L YS WRS + + +ALAL L Y + V L GD Q + +K+ Sbjct: 9 LKLYSYWRSSCAHRVRIALALKGLDYEYIPVNLLKGD--QFDSDFKKI 54 >1YIR-A nrPDB Length = 408 Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust. Identities = 105/440 (23%), Positives = 158/440 (35%), Gaps = 90/440 (20%) Query: 3 AEQDPEARAAARPLLTDLYQATMALGYWRAGRARDAAEFELFFRRCPFGGAFALAA-GLR 61 AE R L TD Y+ TM AE E FR C L +R Sbjct: 4 AESAFSERIVQNLLDTDFYKLTMMQA---VLHNYPNAEVEWEFR-CRNQEDLRLYLPAIR 59 Query: 62 DCVRFLRAFRLRDADVQFLASVLPPDTDPAFFEHLRALDCSEVTVRALPEGSLAFPGVPL 121 + + +L + D + FL + P P F L + V+ E F Sbjct: 60 EQLEYLAGLAISDEQLAFLERI--PFLAPDFIRFLGLFRFNPRYVQTGIENDEFF----- 112 Query: 122 LQVSGPLLVVQLLETPLLCLVS-------YASLVATNAAR--------LRLIAGPEK--- 163 L++ GP L V L E PLL ++S Y + A LR A E+ Sbjct: 113 LRLKGPWLHVILFEVPLLAMISEVRNRARYPAATVEQARERLQEKFDWLRREASAEELAG 172 Query: 164 -RLLEMGLRR---AQGPDGGLTASTYSYLGGFDSSSNV-LAGQLRGVPVAGTLAHSFVTS 218 ++ + G RR + + ++ + G F +SNV LA +L P+ GT+AH ++ + Sbjct: 173 FKMADFGTRRRFSYRVHEAVVSGLKEDFPGCFVGTSNVHLARKLDLKPL-GTMAHEWLMA 231 Query: 219 FSGSEVPPDPMLAPAAGEGPGVDLAAKAQVWLEQVCAHLGLGVQEPHPGERAAFVAYALA 278 L P + +A W+ + LG+ + + + A+ Sbjct: 232 HQ--------QLGPRLIDSQ----SAALDCWVREYRGLLGIALTDCITTD-----AFLRD 274 Query: 279 FPRAFQGLLDTYSVWRSGLPNFLAVALALGELGYRAVGVRLDSGDLLQQAQEIRKVFRAA 338 F F L D G+R DSGD L A++ A Sbjct: 275 FDLYFAKLFD---------------------------GLRHDSGDPLLWAEKT----IAH 303 Query: 339 AAQFQVPWLESVLIVVSNNID-EEALARLAQEGSEVNV-IGIGTSVVTC--PQQPSLGGV 394 + + L L V S+ +D AL +NV GIGT TC P + V Sbjct: 304 YLKLGIDPLTKTL-VFSDGLDLPRALKIYRALQGRINVSFGIGTH-FTCDLPGVEPMNIV 361 Query: 395 YKLVAVGGQPRMKLTEDPEK 414 K+ A G P K+++ P K Sbjct: 362 VKMSACNGHPVAKISDTPGK 381 >2JL4-A nrPDB Length = 213 Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust. Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 6/63 (9%) Query: 287 LDTYSVWRSGLPNFLAVALALGELGYRAVGVRLDSGDLLQQAQEIRKVFRAAAAQFQVPW 346 + Y+ WRSG + L +AL L + Y + V L + L+ A F+A Q VP Sbjct: 2 MKLYNFWRSGTSHRLRIALNLKGVPYEYLAVHLGKEEHLKDA------FKALNPQQLVPA 55 Query: 347 LES 349 L++ Sbjct: 56 LDT 58 >4TSM-A nrPDB Length = 520 Score = 28.9 bits (63), Expect = 5.7, Method: Compositional matrix adjust. Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 1/52 (1%) Query: 380 TSVVTCPQQPSLGGVYKLVAVGGQPRMKLTEDPEKQTLPGSKAAFRLLGSDG 431 T + + P + +GG YKL+ VG + +++ + E TL +++A +LL G Sbjct: 418 TYMESLPDKADIGGKYKLIKVGNKLVLQIGTNDEGVTLTEAQSA-KLLSDIG 468 >2P8E-A nrPDB Length = 307 Score = 28.5 bits (62), Expect = 8.4, Method: Compositional matrix adjust. Identities = 16/56 (28%), Positives = 30/56 (53%) Query: 301 LAVALALGELGYRAVGVRLDSGDLLQQAQEIRKVFRAAAAQFQVPWLESVLIVVSN 356 LAV+ ALG+ Y+ V + + L+ E+ ++ RA +F + + + V+SN Sbjct: 198 LAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDVMSN 253 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4YUB-A nrPDB 786 0.0 2F7F-A nrPDB 604 e-173 1YTE-A nrPDB 370 e-103 2I14-A nrPDB 369 e-102 Sequences not found previously or not previously below threshold: 1YIR-A nrPDB 73 4e-13 1VLP-A nrPDB 72 6e-13 4HL7-A nrPDB 50 3e-06 1YBE-A nrPDB 47 2e-05 2IM5-A nrPDB 46 4e-05 2BVY-A nrPDB 34 0.21 2B7N-A nrPDB 34 0.22 3C2O-A nrPDB 33 0.25 1HYH-A nrPDB 33 0.28 4I9A-A nrPDB 33 0.42 4MM1-A nrPDB 31 0.94 5WNL-A nrPDB 31 1.0 4K2X-A nrPDB 31 1.4 1X1O-A nrPDB 29 5.6 >4YUB-A nrPDB Length = 538 Score = 786 bits (2028), Expect = 0.0, Method: Composition-based stats. Identities = 538/538 (100%), Positives = 538/538 (100%) Query: 1 MAAEQDPEARAAARPLLTDLYQATMALGYWRAGRARDAAEFELFFRRCPFGGAFALAAGL 60 MAAEQDPEARAAARPLLTDLYQATMALGYWRAGRARDAAEFELFFRRCPFGGAFALAAGL Sbjct: 1 MAAEQDPEARAAARPLLTDLYQATMALGYWRAGRARDAAEFELFFRRCPFGGAFALAAGL 60 Query: 61 RDCVRFLRAFRLRDADVQFLASVLPPDTDPAFFEHLRALDCSEVTVRALPEGSLAFPGVP 120 RDCVRFLRAFRLRDADVQFLASVLPPDTDPAFFEHLRALDCSEVTVRALPEGSLAFPGVP Sbjct: 61 RDCVRFLRAFRLRDADVQFLASVLPPDTDPAFFEHLRALDCSEVTVRALPEGSLAFPGVP 120 Query: 121 LLQVSGPLLVVQLLETPLLCLVSYASLVATNAARLRLIAGPEKRLLEMGLRRAQGPDGGL 180 LLQVSGPLLVVQLLETPLLCLVSYASLVATNAARLRLIAGPEKRLLEMGLRRAQGPDGGL Sbjct: 121 LLQVSGPLLVVQLLETPLLCLVSYASLVATNAARLRLIAGPEKRLLEMGLRRAQGPDGGL 180 Query: 181 TASTYSYLGGFDSSSNVLAGQLRGVPVAGTLAHSFVTSFSGSEVPPDPMLAPAAGEGPGV 240 TASTYSYLGGFDSSSNVLAGQLRGVPVAGTLAHSFVTSFSGSEVPPDPMLAPAAGEGPGV Sbjct: 181 TASTYSYLGGFDSSSNVLAGQLRGVPVAGTLAHSFVTSFSGSEVPPDPMLAPAAGEGPGV 240 Query: 241 DLAAKAQVWLEQVCAHLGLGVQEPHPGERAAFVAYALAFPRAFQGLLDTYSVWRSGLPNF 300 DLAAKAQVWLEQVCAHLGLGVQEPHPGERAAFVAYALAFPRAFQGLLDTYSVWRSGLPNF Sbjct: 241 DLAAKAQVWLEQVCAHLGLGVQEPHPGERAAFVAYALAFPRAFQGLLDTYSVWRSGLPNF 300 Query: 301 LAVALALGELGYRAVGVRLDSGDLLQQAQEIRKVFRAAAAQFQVPWLESVLIVVSNNIDE 360 LAVALALGELGYRAVGVRLDSGDLLQQAQEIRKVFRAAAAQFQVPWLESVLIVVSNNIDE Sbjct: 301 LAVALALGELGYRAVGVRLDSGDLLQQAQEIRKVFRAAAAQFQVPWLESVLIVVSNNIDE 360 Query: 361 EALARLAQEGSEVNVIGIGTSVVTCPQQPSLGGVYKLVAVGGQPRMKLTEDPEKQTLPGS 420 EALARLAQEGSEVNVIGIGTSVVTCPQQPSLGGVYKLVAVGGQPRMKLTEDPEKQTLPGS Sbjct: 361 EALARLAQEGSEVNVIGIGTSVVTCPQQPSLGGVYKLVAVGGQPRMKLTEDPEKQTLPGS 420 Query: 421 KAAFRLLGSDGSPLMDMLQLAEEPVPQAGQELRVWPPGAQEPCTVRPAQVEPLLRLCLQQ 480 KAAFRLLGSDGSPLMDMLQLAEEPVPQAGQELRVWPPGAQEPCTVRPAQVEPLLRLCLQQ Sbjct: 421 KAAFRLLGSDGSPLMDMLQLAEEPVPQAGQELRVWPPGAQEPCTVRPAQVEPLLRLCLQQ 480 Query: 481 GQLCEPLPSLAESRALAQLSLSRLSPEHRRLRSPAQYQVVLSERLQALVNSLCAGQSP 538 GQLCEPLPSLAESRALAQLSLSRLSPEHRRLRSPAQYQVVLSERLQALVNSLCAGQSP Sbjct: 481 GQLCEPLPSLAESRALAQLSLSRLSPEHRRLRSPAQYQVVLSERLQALVNSLCAGQSP 538 >2F7F-A nrPDB Length = 494 Score = 604 bits (1556), Expect = e-173, Method: Composition-based stats. Identities = 167/516 (32%), Positives = 259/516 (50%), Gaps = 71/516 (13%) Query: 16 LLTDLYQATMALGYWRAGRARDAAEFELFFRRCPFGGAFALAAGLRDCVRFLRAFRLRDA 75 L TD+YQ M YW GRA A FE +FR PF +A+ AGL V +L ++ Sbjct: 12 LHTDMYQINMMQTYWELGRADLHAVFECYFREMPFNHGYAIFAGLERLVNYLENLTFTES 71 Query: 76 DVQFLASV--LPPDTDPAFFEHLRALDCSEVTVRALPEGSLAFPGVPLLQVSGPLLVVQL 133 D+ +L V P D F +L + + TVR+ EG L F PL+Q+ GPL QL Sbjct: 72 DIAYLREVEEYPED----FLTYLANFEF-KCTVRSALEGDLVFNNEPLIQIEGPLAQCQL 126 Query: 134 LETPLLCLVSYASLVATNAARLRLIAGPEKRLLEMGLRRAQGPDGGLTASTYSYLGGFDS 193 +ET LL +V++ +L+AT AAR++ + G + LLE G RRAQ D + + +Y+GG D+ Sbjct: 127 VETALLNMVNFQTLIATKAARIKSVIGDD-PLLEFGTRRAQELDAAIWGTRAAYIGGADA 185 Query: 194 SSNVLAGQLRGVPVAGTLAHSFVTSFSGSEVPPDPMLAPAAGEGPGVDLAAKAQVWLEQV 253 +SNV AG++ G+PV+GT AHS V S+ Sbjct: 186 TSNVRAGKIFGIPVSGTHAHSLVQSYG--------------------------------- 212 Query: 254 CAHLGLGVQEPHPGERAAFVAYALAFPRAFQGLLDTYSVWRSGLPNFLAVALALGELGYR 313 + AF+AYA R L+DTY ++G+P+ + VA +G+ Sbjct: 213 -------------NDYEAFMAYAKT-HRDCVFLVDTYDTLKAGVPSAIRVAREMGD-KIN 257 Query: 314 AVGVRLDSGDLLQQAQEIRKVFRAAAAQFQVPWLESVLIVVSNNIDEEALARLAQEGSEV 373 +GVR+DSGD+ ++ +R+ A I SN++DE + L + S++ Sbjct: 258 FLGVRIDSGDMAYISKRVREQLDEA-------GFTEAKIYASNDLDENTILNLKMQKSKI 310 Query: 374 NVIGIGTSVVTCPQQPSLGGVYKLVAVGG-----QPRMKLTEDPEKQTLPGSKAAFRLL- 427 +V G+GT ++T QP+LG V+KLV++ G + +KL+ + EK T PG K +R+ Sbjct: 311 DVWGVGTKLITAYDQPALGAVFKLVSIEGEDGQMKDTIKLSSNAEKVTTPGKKQVWRITR 370 Query: 428 GSDGSPLMDMLQLAEEPVPQAGQELRVWPP-GAQEPCTVRPAQVEPLLRLCLQQGQLCEP 486 SD D + L E P+ +E+ ++ P VR + P+L+ +G+ Sbjct: 371 KSDKKSEGDYVTLWNED-PRQEEEIYMFHPVHTFINKYVRDFEARPVLQDIFVEGKRVYE 429 Query: 487 LPSLAESRALAQLSLSRLSPEHRRLRSPAQYQVVLS 522 LP+L E + A+ +L L E++R +P +Y V LS Sbjct: 430 LPTLDEIKQYAKENLDSLHEEYKRDLNPQKYPVDLS 465 >1YTE-A nrPDB Length = 398 Score = 370 bits (949), Expect = e-103, Method: Composition-based stats. Identities = 92/426 (21%), Positives = 160/426 (37%), Gaps = 98/426 (23%) Query: 85 PPDTDPAFF---EHLRALDCSEVTVRALPEGSLAFPG------VPLLQVSGPLLVVQLLE 135 P DT F E L+ L+ +V + A+PEG++ FP VP ++V G + E Sbjct: 53 PLDTWINFTGLDEVLKLLEGLDVDLYAIPEGTILFPRDANGLPVPFIRVEGRYCDFGMYE 112 Query: 136 TPLLCLVSYASLVATNAARLRLIAGPEKRLLEMGLRRAQGPDGGLTASTYSYLGGFDSSS 195 T +L + AS ++T A+++RL AG + G+RR P +Y+GG D S Sbjct: 113 TAILGFICQASGISTKASKVRLAAG-DSPFFSFGIRRMH-PAISPMIDRSAYIGGADGVS 170 Query: 196 NVLAGQLRGVPVAGTLAHSFVTSFSGSEVPPDPMLAPAAGEGPGVDLAAKAQVWLEQVCA 255 +L +L GT+ H+ + + W Sbjct: 171 GILGAKLIDQDPVGTMPHALSI------------------------MLGDEEAW------ 200 Query: 256 HLGLGVQEPHPGERAAFVAYALAFPRAFQGLLDTYSVWRSGLPNFLAVALALGELGYRAV 315 L ++ G+++ L+DTY + F A+ +A E+ + Sbjct: 201 --KLTLENTKNGQKSVL-------------LIDTYMDEK-----FAAIKIA--EMFDKVD 238 Query: 316 GVRLDSGDLLQQAQEIRKVFRAAAAQFQVPWLESVLIVVSNNIDEEALARLAQEGSEVNV 375 +RLD+ + + R + + + I+VS +DE + +L + G+E Sbjct: 239 YIRLDTPS--SRRGNFEALIREVRWELALRGRSDIKIMVSGGLDENTVKKLREAGAE--A 294 Query: 376 IGIGTSVVTCPQQPSLGGVYKLVAVGGQPRMKLTEDPEKQTLPGSKAAFRLLGSDGSPLM 435 G+GTS+ + +P +V V G+P K + + G K R Sbjct: 295 FGVGTSISSA--KP-FDFAMDIVEVNGKPETK------RGKMSGRKNVLRCT-------- 337 Query: 436 DMLQLAEEPVPQAGQELRVWPPGAQEPCTVRPAQVEPLLRLCLQQGQLC--EPLPSLAES 493 + + V P QE + ++ LL L G+ P P S Sbjct: 338 ------------SCHRIEVVPANVQEKTCICGGSMQNLLVKYLSHGKRTSEYPRPKEIRS 385 Query: 494 RALAQL 499 R++ +L Sbjct: 386 RSMKEL 391 >2I14-A nrPDB Length = 395 Score = 369 bits (946), Expect = e-102, Method: Composition-based stats. Identities = 97/414 (23%), Positives = 163/414 (39%), Gaps = 86/414 (20%) Query: 94 EHLRALDCSEVTVRALPEGSLAFPGVPLLQVSGPLLVVQLLETPLLCLVSYASLVATNAA 153 E + L+ V V A+PEG++ P P+LQ+ G + ET LL ++S AS +AT A Sbjct: 67 EVAKLLEGIPVNVYAMPEGTIFHPYEPVLQIEGDYADFGIYETALLGMLSQASGIATAAL 126 Query: 154 RLRLIAGPEKRLLEMGLRRAQGPDGGLTASTYSYLGGFDSSSNVLAGQLRGVPVAGTLAH 213 R++ IA K + G+R P +++GG D S VL ++ G GT+ H Sbjct: 127 RIK-IAAKFKPVYSFGIRHMH-PAIAPMIDRAAFIGGCDGVSGVLGAEMMGEKAVGTMPH 184 Query: 214 SFVTSFSGSEVPPDPMLAPAAGEGPGVDLAAKAQVWLEQVCAHLGLGVQEPHPGERAAFV 273 + + + G +V KA + ++V ++E P Sbjct: 185 ALIITV-GDQV--------------------KAWKYFDEV-------IEEEVPR------ 210 Query: 274 AYALAFPRAFQGLLDTYSVWRSGLPNFLAVALALGELGYRAVGVRLDSGDLLQQAQEIRK 333 L+DT+ + +A LG + VRLD+ + RK Sbjct: 211 ----------IALVDTF------YDEKVEAVMAAEALGKKLFAVRLDTPS--SRRGNFRK 252 Query: 334 VFRAAAAQFQVPWLESVLIVVSNNIDEEALARLAQEGSEVNVIGIGTSVVTCPQQPSLGG 393 + + +V + V I VS +DEE + + V+ G+G ++ + +P + Sbjct: 253 IIEEVRWELKVRGYDWVKIFVSGGLDEEKIKEIV---DVVDAFGVGGAIASA--KP-VDF 306 Query: 394 VYKLVAVGGQPRMKLTEDPEKQTLPGSKAAFRLLGSDGSPLMDMLQLAEEPVPQAGQELR 453 +V V G+P K + L G K +R + V A ++L Sbjct: 307 ALDIVEVEGKPIAK------RGKLSGRKQVYRC------------ENGHYHVVPANKKL- 347 Query: 454 VWPPGAQEPCTVRPAQVEPLLRLCLQQGQLCEPLPSLAESRALAQLSLSRLSPE 507 E C V A+VEPLL+ ++ G++ P E R + + E Sbjct: 348 -------ERCPVCNAKVEPLLKPIIENGEIVVEFPKAREIREYVLEQAKKFNLE 394 >1YIR-A nrPDB Length = 408 Score = 72.6 bits (176), Expect = 4e-13, Method: Composition-based stats. Identities = 93/449 (20%), Positives = 150/449 (33%), Gaps = 104/449 (23%) Query: 3 AEQDPEARAAARPLLTDLYQATMALGY----------WRAGRARDAAEFELFFRRCPFGG 52 AE R L TD Y+ TM W R R+ + L+ Sbjct: 4 AESAFSERIVQNLLDTDFYKLTMMQAVLHNYPNAEVEWEF-RCRNQEDLRLYL------- 55 Query: 53 AFALAAGLRDCVRFLRAFRLRDADVQFLASVLPPDTDPAFFEHLRALDCSEVTVRALPEG 112 +R+ + +L + D + FL + P P F L + V+ E Sbjct: 56 -----PAIREQLEYLAGLAISDEQLAFLERI--PFLAPDFIRFLGLFRFNPRYVQTGIEN 108 Query: 113 SLAFPGVPLLQVSGPLLVVQLLETPLLCLVSY--------ASLVATNAARL--------R 156 F L++ GP L V L E PLL ++S A+ V RL R Sbjct: 109 DEFF-----LRLKGPWLHVILFEVPLLAMISEVRNRARYPAATVEQARERLQEKFDWLRR 163 Query: 157 LIAGPEK---RLLEMGLRRA---QGPDGGLTASTYSYLGGFDSSSNVLAGQLRGVPVAGT 210 + E ++ + G RR + + ++ + G F +SNV + + GT Sbjct: 164 EASAEELAGFKMADFGTRRRFSYRVHEAVVSGLKEDFPGCFVGTSNVHLARKLDLKPLGT 223 Query: 211 LAHSFVTSFSGSEVPPDPMLAPAAGEGPGVDLAAKAQVWLEQVCAHLGLGVQEPHPGERA 270 +AH ++ M G +A W+ + LG+ + + + Sbjct: 224 MAHEWL------------MAHQQLGPRLIDSQSAALDCWVREYRGLLGIALTDCITTD-- 269 Query: 271 AFVAYALAFPRAFQGLLDTYSVWRSGLPNFLAVALALGELGYRAVGVRLDSGDLLQQAQE 330 AF R F D Y G+R DSGD L A++ Sbjct: 270 -------AFLRDF----DLY-------------------FAKLFDGLRHDSGDPLLWAEK 299 Query: 331 IRKVFRAAAAQFQVPWLESVLIVVSNNIDEEALARL--AQEGSEVNVIGIGTSVV-TCPQ 387 + + + L L+ S+ +D ++ A +G GIGT P Sbjct: 300 TIAHY----LKLGIDPLTKTLVF-SDGLDLPRALKIYRALQGRINVSFGIGTHFTCDLPG 354 Query: 388 QPSLGGVYKLVAVGGQPRMKLTEDPEKQT 416 + V K+ A G P K+++ P K Sbjct: 355 VEPMNIVVKMSACNGHPVAKISDTPGKAQ 383 >1VLP-A nrPDB Length = 441 Score = 72.2 bits (175), Expect = 6e-13, Method: Composition-based stats. Identities = 82/442 (18%), Positives = 150/442 (33%), Gaps = 97/442 (21%) Query: 16 LLTDLYQATMALGYWRAGRARDAAEFELFFRRCPFGGAFALAAGLRDCVRFLRAFRLRDA 75 L TD+Y+ TM + ++ R L++ +L R + Sbjct: 22 LDTDMYKITMHAAVF-TNFPDVTVTYKYTNRSSQLTFNKEAINWLKEQFSYLGNLRFTEE 80 Query: 76 DVQFLASVLPPDTDPAFFEHLRALDCSEVTVRALPEGSLAFPGVPL----------LQVS 125 ++++L +P A+ +++ S + PE ++F + + VS Sbjct: 81 EIEYLKQEIPY-LPSAYIKYI-----SSSNYKLHPEEQISFTSEEIEGKPTHYKLKILVS 134 Query: 126 GPLLVVQLLETPLLCLVS------------YASLVATNAARLRLIAGPEKRLLEMGLRRA 173 G L E PLL L+S Y + + + + R E G RR Sbjct: 135 GSWKDTILYEIPLLSLISEAYFKFVDIDWDYENQLEQAEKKAETLFDNGIRFSEFGTRRR 194 Query: 174 QGP---DGGLTASTYSYLGGFD-------SSSNVLAGQLRGVPVAGTLAHSFVTSFSGSE 223 + D + + G D +SN+L + GV GT+AH +V + Sbjct: 195 RSLKAQDLIMQGIMKAVNGNPDRNKSLLLGTSNILFAKKYGVKPIGTVAHEWVM--GVAS 252 Query: 224 VPPDPMLAPAAGEGPGVDLAAKAQVWLEQVCAHLGLGVQEPHPGERAAFVAYALAFPRAF 283 + D + A ++ L Sbjct: 253 ISEDYLHANKNAMDCWINTFGAKNAGL--------------------------------- 279 Query: 284 QGLLDTYSVWRSGLPNFLAVALALGELGYRAVGVRLDSGDLLQQAQEIRKVFRAAAAQFQ 343 L DT+ G +FL VGVR DSGD ++ ++I + + Sbjct: 280 -ALTDTF-----GTDDFLKSFRP--PYSDAYVGVRQDSGDPVEYTKKISHHYHDV---LK 328 Query: 344 VPWLESVLIVVSNNIDEE---ALARLAQEGSEVNVIGIGTSVVTCPQQPS--------LG 392 +P ++ S++++ E + A+E + GIGT+ ++ S L Sbjct: 329 LPKFSKIICY-SDSLNVEKAITYSHAAKENGMLATFGIGTNFTNDFRKKSEPQVKSEPLN 387 Query: 393 GVYKLVAVGGQPRMKLTEDPEK 414 V KL+ V G +K++++ K Sbjct: 388 IVIKLLEVNGNHAIKISDNLGK 409 >4HL7-A nrPDB Length = 446 Score = 49.9 bits (117), Expect = 3e-06, Method: Composition-based stats. Identities = 81/434 (18%), Positives = 128/434 (29%), Gaps = 91/434 (20%) Query: 16 LLTDLYQATMALGYWRAGRARDAAEFELFFRRCPFGGAFALAAGLRDCVRFLRAFRLRDA 75 L D Y+ M + +EL R A L +R + L R DA Sbjct: 17 LDLDAYKINMMQAIHHF-YPDVSVRYELIVRSE--EDASGLLDAIRQEIAHLGTLRFSDA 73 Query: 76 DVQFLASVLPPDTDPAFFEHLRALDCSEVTVRALPEGSLAFPGVPLLQVS--GPLLVVQL 133 D+ +L P F + LR V + G + G L++S G L Sbjct: 74 DIHYLTQ-HAPHLKATFLQSLRYFHF--VPQEQVEMGIVKQGGKQQLRISIRGSWRDTIL 130 Query: 134 LETPLLCLVSYA---------------SLVATNAARLRLIAGPEK----RLLEMGLRR-- 172 ET ++ +VS ++ T +L+ L EMG RR Sbjct: 131 YETLVMAIVSEVRSRQRWAEVPADLPLKVLKTKLDQLKAEIERRGINNFSLTEMGTRRRF 190 Query: 173 -AQGPDGGLTASTYSYLGGFDSSSNVLAGQLRGVPVAGTLAHSFVTSFSGSEVPPDPMLA 231 +Q L +SN + + GT+AH + + Sbjct: 191 SSQVQRDVLACLKQEIPQWVLGTSNYHFAREFDLKPIGTIAH-------------EWFMG 237 Query: 232 PAAGEGPGVDLAAKAQVWLEQVCAHLGLGVQEPHPGERAAFVAYALAFPRAFQGLLDTYS 291 A + WL L + P + A+ F R L + Y Sbjct: 238 HQALVNERDSQQVALERWLTAFDGMLAIA-----PTDTLTIDAFLNDFNRH---LANAYD 289 Query: 292 VWRSGLPNFLAVALALGELGYRAVGVRLDSGDLLQQAQEIRKVFRAAAAQFQVPWLESVL 351 GVR DSG + ++ ++ Sbjct: 290 ------------------------GVRHDSGCPFRWGDKMIAHYQQLGIDPTTKLF---- 321 Query: 352 IVVSNNIDEEALARLAQ--EGSEVNVIGIGTSV---------VTCPQQPSLGGVYKLVAV 400 + S+ +D + L + G GIGT + + L V KL Sbjct: 322 -IFSDGLDFDQALELCEYFAGRVKISFGIGTFLTNDLANWRNAAGVEYRPLSIVIKLAEC 380 Query: 401 GGQPRMKLTEDPEK 414 G+P K+++ PEK Sbjct: 381 QGRPVAKISDQPEK 394 >1YBE-A nrPDB Length = 449 Score = 46.8 bits (109), Expect = 2e-05, Method: Composition-based stats. Identities = 92/452 (20%), Positives = 143/452 (31%), Gaps = 101/452 (22%) Query: 6 DPEARAAARPLLTDLYQATMALGYWRAGRARDAAEFELFFRRCPFGGAFAL-AAGLRDCV 64 DP R+ + TD Y+ M W+ A F L R A + LR+ + Sbjct: 25 DPIVRSL---IDTDFYKLLMLQMIWKL-YPEVDATFSLINRTKTVRLAEEIDEMELREQL 80 Query: 65 RFLRAFRLRDADVQFLA--SVLPPDT--DPAFFEHLRALDCSEVTVRALPEGSLA-FPGV 119 R RL + +LA + +P F L + LPE L G Sbjct: 81 DHARTLRLSKKENIWLAGNTFYGRSQIFEPEFLSWLSS--------YQLPEYELFKRDGQ 132 Query: 120 PLLQVSGPLLVVQLLETPLLCLVSYAS---------------LVATNAARL-----RLIA 159 L G + L E P L +++ L A A++ RL Sbjct: 133 YELNFHGRWMDTTLWEIPALSIINELRSRSAMRSLGYFTLDVLYARAKAKMWEKVERLRE 192 Query: 160 GPEKRLLEMGLRRAQGPDGGLTASTYSYLG---GFDSSSNVLAGQLRGVPVAGTLAHSFV 216 P R+ + G RR G F +SNVL + GT AH Sbjct: 193 LPGLRISDFGTRRRHSFLWQRWCVEALKEGIGPAFTGTSNVLLAMDSDLEAVGTNAHEL- 251 Query: 217 TSFSGSEVPPDPMLAPAAGEGPGVDLAAKAQVWLEQVCAHLGLGVQEPHPGERAAFVAYA 276 PM+ A + AA QV + + G + Sbjct: 252 -----------PMVVAALAQTNEELAAAPYQVLKDWNRLYGGNLL--------------- 285 Query: 277 LAFPRAFQGLLDTYSVWRSGLPNFLAVALALGELGYRAVGVRLDSGDLLQQAQEIRKVFR 336 L D + A E G R DS ++ ++I + +R Sbjct: 286 -------IVLPDAFGT--------AAFLRNAPEWVADWTGFRPDSAPPIEGGEKIIEWWR 330 Query: 337 AAAAQFQVPWLESVLIVVSNNIDEEALARLAQ--EGSEVNVIGIGTSVVT---------- 384 +LI S+ +D +A+ + EG G GT++ Sbjct: 331 KMGRD----PRTKMLIF-SDGLDVDAIVDTYRHFEGRVRMSFGWGTNLTNDFAGCAPKTI 385 Query: 385 CPQQPSLGGVYKLVAVGGQPRMKLTEDPEKQT 416 +P + V K+ G+P +KL+++P+K T Sbjct: 386 ASLKP-ISIVCKVSDANGRPAVKLSDNPQKAT 416 >2IM5-A nrPDB Length = 394 Score = 46.0 bits (107), Expect = 4e-05, Method: Composition-based stats. Identities = 56/224 (25%), Positives = 83/224 (37%), Gaps = 28/224 (12%) Query: 16 LLTDLYQATMALGYWRAGRARDAAEFELFFR-RCPFGGAFALAAGLRDCVRFLRAFRLRD 74 L TDLY+ T Y + R EF R R F FA +R +R + A L Sbjct: 8 LDTDLYKFTTGYAYAKL-FPRAYGEFRFIDRNRQGFTEEFAEL--VRGEIRAMAALSLTR 64 Query: 75 ADVQFLASVLP--PDTDPAFFEHLRALDCSEVTVRALPEGSLAFPGVPLLQVSGPLLVVQ 132 + +FL LP P F + R D EVTV +G L ++ G L V Sbjct: 65 DEKEFLQRELPYLPPIYIDFLDGFR-FDPEEVTVSIDAQGHLD------IRAQGLLYRVT 117 Query: 133 LLETPLLCLVS------------YASLVATNAARLRLIAGPEKRLLEMGLRRAQGPDGGL 180 L ETP+L ++S + + ++ L+ G+RR + Sbjct: 118 LWETPILAVISELYYRFIGAEPDWKQVEEVTRSKGELMREHRATFSIFGMRRRFSLEVED 177 Query: 181 TAST--YSYLG-GFDSSSNVLAGQLRGVPVAGTLAHSFVTSFSG 221 + Y G +SNV G+ V+GT H ++ Sbjct: 178 RVTDILKQYAGESLFGTSNVHLAHKHGLRVSGTHPHEWIQFHGA 221 >2BVY-A nrPDB Length = 475 Score = 33.7 bits (75), Expect = 0.21, Method: Composition-based stats. Identities = 62/359 (17%), Positives = 109/359 (30%), Gaps = 56/359 (15%) Query: 157 LIAGPEKRLLEMGLRRAQGPDGGLTASTYSYLGGFDSSSN-----VLAGQ--------LR 203 +I G E+ L R +GG ++ S V G LR Sbjct: 73 IIEGNERPGLAENTRDENIALFADYIRKADAIGGVNTVSAHVENFVTGGSFYDTSGDTLR 132 Query: 204 GVPVAGTLAHSFVTSFSGSEVPPDPMLAPAAGEGPGVDLAAKAQVWLEQVCAHLGLGVQE 263 V G+ H+ + ++ LA A+ G + + W E + G Sbjct: 133 AVLPGGSH-HAELVAYLDD----IAELADASRRDDGTLIPIVFRPWHENAGSWFWWGAAY 187 Query: 264 PHPGERAAFVAYALAFPRAFQGLLDTYSVWRSGLPNF----LAVALALGELGYRAVGVRL 319 PGE + + + R +G+ + W G + + G+ +G L Sbjct: 188 GSPGEYQELYRFTVEYLRDVKGVSNFLYAWGPGGGFGGNRDVYLRTYPGDAFVDVLG--L 245 Query: 320 DSGDLLQQAQEIRKVFRAAAAQFQVPWLESVLIVVSNNIDEEALARLAQEGSEVNV---I 376 D+ + + + + L + D +A +A E +V+ Sbjct: 246 DT-------------YDSTGSDAFLAGLVA---------DLRMIAEIADEKGKVSAFTEF 283 Query: 377 GIGTSVVTCPQQPSLGGVYKLVAVGGQPRMKLTEDPEKQTLPGSKAAFRLLGSDGSPLMD 436 G+ V T P+ L A+ P E + F + D D Sbjct: 284 GVSGGVGTNGSSPAQWFTKVLAAIKADPVASRNAYMETWANFDAGQHFVPVPGDALLE-D 342 Query: 437 MLQLAEEPVPQAGQELRVWPPGAQEPCTVRPAQVEPLLRLCL-QQGQLCEPLPSLAESR 494 A +P E+ GA + TV A +P++ + G P+ R Sbjct: 343 FQAYAADPFTLFASEV----TGAFDR-TVAAAPAQPVVHIASPADGARVASAPTTVRVR 396 >2B7N-A nrPDB Length = 273 Score = 33.7 bits (75), Expect = 0.22, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 4/61 (6%) Query: 98 ALDCSEVT----VRALPEGSLAFPGVPLLQVSGPLLVVQLLETPLLCLVSYASLVATNAA 153 AL+ E+T V+ + + P L+++ G ++ +E LL L+ ++S +AT + Sbjct: 49 ALELLEMTGIECVQTIKDKERFKPKDALMEIRGDFSMLLKVERTLLNLLQHSSGIATLTS 108 Query: 154 R 154 R Sbjct: 109 R 109 >3C2O-A nrPDB Length = 294 Score = 33.3 bits (74), Expect = 0.25, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 35/88 (39%), Gaps = 6/88 (6%) Query: 111 EGSLAFP------GVPLLQVSGPLLVVQLLETPLLCLVSYASLVATNAARLRLIAGPEKR 164 EGS P + + +++GP + L E L ++S +S +AT + ++ +A Sbjct: 75 EGSFLEPSKNDSGKIVVAKITGPAKNILLAERTALNILSRSSGIATASHKIISLARSTGY 134 Query: 165 LLEMGLRRAQGPDGGLTASTYSYLGGFD 192 + R P +GG D Sbjct: 135 KGTIAGTRKTTPGLRRLEKYSMLVGGCD 162 >1HYH-A nrPDB Length = 309 Score = 33.3 bits (74), Expect = 0.28, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 1/78 (1%) Query: 321 SGDLLQQAQEIRKVFRAAAAQFQVPWLESVLIVVSNNIDE-EALARLAQEGSEVNVIGIG 379 +GD + + + ++ + VL+V+SN +D AL + VIG G Sbjct: 88 TGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVISNPVDVITALFQHVTGFPAHKVIGTG 147 Query: 380 TSVVTCPQQPSLGGVYKL 397 T + T Q ++G + L Sbjct: 148 TLLDTARMQRAVGEAFDL 165 >4I9A-A nrPDB Length = 288 Score = 32.6 bits (72), Expect = 0.42, Method: Composition-based stats. Identities = 27/96 (28%), Positives = 38/96 (39%), Gaps = 2/96 (2%) Query: 109 LPEGSLAFPGVPLLQVSGPLLVVQLLETPLLCLVSYASLVATNAAR-LRLIAGPEKRLLE 167 LPEGS P + +V GP + L E L +++ S VA+ AA + G Sbjct: 75 LPEGSKLVPVAKVAEVRGPAHCLLLGERVALNMLARCSGVASAAATAVETARGTGWAGHV 134 Query: 168 MGLRRAQGPDGGLTASTYSYLGGFDSSSNVLAGQLR 203 G R+ P L +GG S L G + Sbjct: 135 AGTRKT-TPGFRLVEKYGLLVGGATSHRYDLGGLVM 169 >4MM1-A nrPDB Length = 250 Score = 31.4 bits (69), Expect = 0.94, Method: Composition-based stats. Identities = 39/207 (18%), Positives = 64/207 (30%), Gaps = 13/207 (6%) Query: 174 QGPDGGLTASTYSYLGGFDSSSNVLAGQLRGVPVAGTLAHSF--VTSFSGSEVPPDPMLA 231 Q P+ + + + GG D +L G A + P + Sbjct: 29 QTPEEAVEIARAAIRGGTDGI--MLGGSTTDSSELDNTARALRENIDVPIILFPGNTTGV 86 Query: 232 PAAGEGPGVDLAAKAQVWLEQVCAHLGLGVQEPHPGERAAFVAYALAFPRAFQGLL-DTY 290 + + + A G A + Y + P G + DT Sbjct: 87 SRYADAIFFMSLLNSTNPYWIIGAQALGAATVKKMGIEALPMGYLVVEPGGTVGWVGDTK 146 Query: 291 SVWRSGLPNFLAVALALGELGYRAVGVRLDSGDLLQQAQEIRKVFRAAAAQFQVPWLESV 350 V R+ A A+A LG R + SG +E+ + + + + Sbjct: 147 PVPRNKPDIAAAYAMAAEFLGMRLFYLEAGSGAPEHVPEEMIALVK--------RCTDQI 198 Query: 351 LIVVSNNIDEEALARLAQEGSEVNVIG 377 LIV E AR+A G++V V G Sbjct: 199 LIVGGGIRSGEDAARVAGAGADVVVTG 225 >5WNL-A nrPDB Length = 342 Score = 31.4 bits (69), Expect = 1.0, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 39/128 (30%), Gaps = 17/128 (13%) Query: 413 EKQTLPGSKAAFRLLGSDGSPLMDMLQLAEEPVPQAGQELRVWPPGAQEPCTVRPAQVEP 472 +K+ K ++ L P P+A L G + C QV P Sbjct: 219 QKKPFADEKNILHIMMKVVKGHRPELPPICRPRPRACASL----IGLMQRCWHADPQVRP 274 Query: 473 LLRLCLQQGQLCEPLPSLAESRALAQ--------LSLSRLSPEHRRLRSPAQYQVV---- 520 + + + P E + LA S S PE RL+ + Sbjct: 275 TFQEITSETEDLCEKPDE-EVKDLAHEPGEKSSLESKSEARPESSRLKRASAPPFDNDCS 333 Query: 521 LSERLQAL 528 LSE L L Sbjct: 334 LSELLSQL 341 >4K2X-A nrPDB Length = 523 Score = 31.0 bits (68), Expect = 1.4, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 18/72 (25%), Gaps = 1/72 (1%) Query: 179 GLTASTYSYLGGFDSSSNVLAGQLRGVPVAGTLAHSFVTSFSGSEVPPDPMLAPAAGEGP 238 G +YL G D +L G+ G H F P P Sbjct: 162 GPYEVECAYLVGCDG-GGSTVRKLLGIDFPGQDPHMFAVIADARFREELPHGEGMGPMRP 220 Query: 239 GVDLAAKAQVWL 250 + + W Sbjct: 221 YGVMRHDLRAWF 232 >1X1O-A nrPDB Length = 286 Score = 29.1 bits (63), Expect = 5.6, Method: Composition-based stats. Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 10/109 (9%) Query: 109 LPEGSLAFPGVPLLQVSGPLLVVQLLETPLLCLVSYASLVAT-NAARLRLIAGPEKRLLE 167 + EG+ G + +V GPL + E L L+ S +AT A + +AG + ++L+ Sbjct: 78 VAEGARVAEGTEVARVRGPLRGILAGERLALNLLQRLSGIATLTRAYVEALAGTKAQILD 137 Query: 168 M-----GLRRAQGPDGGLTASTYSYLGGFDSS----SNVLAGQLRGVPV 207 GLR + + G FD ++V A G V Sbjct: 138 TRKTTPGLRALEKYAVRVGGGRNHRYGLFDGILLKENHVRAAGGVGEAV 186 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.308 0.115 0.282 Lambda K H 0.267 0.0349 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 16,123,050 Number of Sequences: 36641 Number of extensions: 588072 Number of successful extensions: 1570 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 23 Number of HSP's that attempted gapping in prelim test: 1514 Number of HSP's gapped (non-prelim): 45 length of query: 538 length of database: 10,336,785 effective HSP length: 102 effective length of query: 436 effective length of database: 6,599,403 effective search space: 2877339708 effective search space used: 2877339708 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 61 (28.3 bits)