BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= Q6TEC1
         (212 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

2A8R-A nrPDB                                                          431   e-122
3KVH-A nrPDB                                                          192   6e-50
2QJO-A nrPDB                                                           33   0.097
5XXU-U nrPDB                                                           33   0.12 
3GZ5-A nrPDB                                                           32   0.24 
3N77-A nrPDB                                                           30   0.69 
6DT3-A nrPDB                                                           30   0.87 
3OGA-A nrPDB                                                           30   0.91 
3IGZ-B nrPDB                                                           29   1.2  
3EEU-A nrPDB                                                           28   2.2  
2RRK-A nrPDB                                                           28   3.5  
6M7X-A nrPDB                                                           27   4.3  
2ZUE-A nrPDB                                                           27   5.0  
4V14-A nrPDB                                                           27   7.0  
1UM9-A nrPDB                                                           27   7.0  

>2A8R-A nrPDB
          Length = 212

 Score =  431 bits (1109), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 212/212 (100%), Positives = 212/212 (100%)

Query: 1   MAESRSPDRGAKEDKPRPRNISREESLQLEGYKHACHALLHAPSQAKLFDRVPIRRVLLM 60
           MAESRSPDRGAKEDKPRPRNISREESLQLEGYKHACHALLHAPSQAKLFDRVPIRRVLLM
Sbjct: 1   MAESRSPDRGAKEDKPRPRNISREESLQLEGYKHACHALLHAPSQAKLFDRVPIRRVLLM 60

Query: 61  MMRFDGRLGFPGGFVDTRDISLEEGLKRELEEELGPALATVEVTEDDYRSSQVREHPQKC 120
           MMRFDGRLGFPGGFVDTRDISLEEGLKRELEEELGPALATVEVTEDDYRSSQVREHPQKC
Sbjct: 61  MMRFDGRLGFPGGFVDTRDISLEEGLKRELEEELGPALATVEVTEDDYRSSQVREHPQKC 120

Query: 121 VTHFYIKELKLEEIERIEAEAVNAKDHGLEVMGLIRVPLYTLRDRVGGLPAFLCNNFIGN 180
           VTHFYIKELKLEEIERIEAEAVNAKDHGLEVMGLIRVPLYTLRDRVGGLPAFLCNNFIGN
Sbjct: 121 VTHFYIKELKLEEIERIEAEAVNAKDHGLEVMGLIRVPLYTLRDRVGGLPAFLCNNFIGN 180

Query: 181 SKSQLLYALRSLKLLREDQIQEVLKASHRLQY 212
           SKSQLLYALRSLKLLREDQIQEVLKASHRLQY
Sbjct: 181 SKSQLLYALRSLKLLREDQIQEVLKASHRLQY 212


>3KVH-A nrPDB
          Length = 214

 Score =  192 bits (489), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 95/193 (49%), Positives = 134/193 (69%), Gaps = 5/193 (2%)

Query: 16  PRPRNISREESLQL-EGYKHACHALLHAPSQAKLFDRVPIRRVLLMMMRFDGRLGFPGGF 74
           P  + ISR E+++L  G+ H+CHA+L+A +  +LF R+P+R  +LM MRFDG LGFPGGF
Sbjct: 3   PELKQISRVEAMRLGPGWSHSCHAMLYAANPGQLFGRIPMRFSVLMQMRFDGLLGFPGGF 62

Query: 75  VDTRDISLEEGLKRELEEELGPALATVEVTEDDYRSSQVREHPQKCVTHFYIKELKLEEI 134
           VD R  SLE+GL R L       L  + +TE DY SS + E P + V H Y ++L LE++
Sbjct: 63  VDRRFWSLEDGLNRVLGL----GLGCLRLTEADYLSSHLTEGPHRVVAHLYARQLTLEQL 118

Query: 135 ERIEAEAVNAKDHGLEVMGLIRVPLYTLRDRVGGLPAFLCNNFIGNSKSQLLYALRSLKL 194
             +E  AV+++DHGLEV+GL+RVPLYT +DRVGG P FL N F+  +K QLL+AL+ L +
Sbjct: 119 HAVEISAVHSRDHGLEVLGLVRVPLYTQKDRVGGFPNFLSNAFVSTAKCQLLFALKVLNM 178

Query: 195 LREDQIQEVLKAS 207
           + E+++ E L A+
Sbjct: 179 MPEEKLVEALAAA 191


>2QJO-A nrPDB
          Length = 341

 Score = 33.1 bits (74), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 7/70 (10%)

Query: 29  LEGYKHACHALLHAPSQAKLFDRVPIRRVLLMMMRFD-----GRLGFPGGFVDTRDISLE 83
           L+ YK A     +AP+     D V ++   ++M+R       G +  PGGF+   + +L 
Sbjct: 187 LQAYKQAWATAPYAPTFITT-DAVVVQAGHVLMVRRQAKPGLGLIALPGGFIKQNE-TLV 244

Query: 84  EGLKRELEEE 93
           EG+ REL+EE
Sbjct: 245 EGMLRELKEE 254


>5XXU-U nrPDB
          Length = 233

 Score = 32.7 bits (73), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 16/34 (47%), Positives = 24/34 (70%), Gaps = 1/34 (2%)

Query: 131 LEEIERIEAEAVN-AKDHGLEVMGLIRVPLYTLR 163
           L+ IER+  E +N AK+  L+V G +R+P+ TLR
Sbjct: 143 LKSIERVCTELINGAKEKNLQVAGPVRLPVKTLR 176


>3GZ5-A nrPDB
          Length = 240

 Score = 31.6 bits (70), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 1/31 (3%)

Query: 64 FDGRLGFPGGFVD-TRDISLEEGLKRELEEE 93
          F G  G PGGF+D T D SLE+ + R+L E+
Sbjct: 49 FLGLWGLPGGFIDETCDESLEQTVLRKLAEK 79


>3N77-A nrPDB
          Length = 144

 Score = 30.0 bits (66), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)

Query: 64  FDGRLGFPGGFVDTRDISLEEGLKRELEEELGPALATVEVTEDDYR 109
           F G+    GG V+  +  +EE L+RE+ EELG  L   ++T   +R
Sbjct: 32  FPGQWALSGGGVEPGE-RIEEALRREIREELGEQLILSDITPWTFR 76


>6DT3-A nrPDB
          Length = 144

 Score = 29.6 bits (65), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%)

Query: 64  FDGRLGFPGGFVDTRDISLEEGLKRELEEELGPALATVEVTEDDYR-SSQVREHP 117
           F G+    GG V+  +  +EE L+RE+ EELG  L    +    +R  ++V+ +P
Sbjct: 32  FPGQWALSGGGVEPGE-RIEEALRREIREELGEKLILTHIAPWCFRDDTRVKTYP 85


>3OGA-A nrPDB
          Length = 165

 Score = 29.6 bits (65), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)

Query: 64  FDGRLGFPGGFVDTRDISLEEGLKRELEEELGPALATVEVTEDDYR 109
           F G+    GG V+  +  +EE L+RE+ EELG  L   ++T   +R
Sbjct: 53  FPGQWALSGGGVEPGE-RIEEALRREIREELGEQLILSDITPWTFR 97


>3IGZ-B nrPDB
          Length = 561

 Score = 29.3 bits (64), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)

Query: 49  FDRVPIRRV-LLMMMRFDGRLGFPGGFV 75
           FDRV + +V    MMR+DG LG P  F+
Sbjct: 301 FDRVRVPKVRYAGMMRYDGDLGIPNNFL 328


>3EEU-A nrPDB
          Length = 153

 Score = 28.5 bits (62), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 1/30 (3%)

Query: 66 GRLGFPGGFVDTRDISLEEGLKRELEEELG 95
          G+  FPGG ++  + + EE L REL EELG
Sbjct: 48 GQWEFPGGKIENGE-TPEEALARELNEELG 76


>2RRK-A nrPDB
          Length = 140

 Score = 27.7 bits (60), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 6/50 (12%)

Query: 66  GRLGFPGGFVDTRDISLEEGLKRELEEELGPALATVEVTEDDYRSSQVRE 115
           G   F GG V+  D S  + L REL EELG     +E T  +Y +S  RE
Sbjct: 35  GLWEFAGGKVEP-DESQRQALVRELREELG-----IEATVGEYVASHQRE 78


>6M7X-A nrPDB
          Length = 484

 Score = 27.3 bits (59), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 10/63 (15%)

Query: 110 SSQVREHPQKCVTHFYIKELKLEE----------IERIEAEAVNAKDHGLEVMGLIRVPL 159
           ++ + EHPQK  T   +    L+E          +ER+ +  +  +++ +    L+RV L
Sbjct: 325 AASISEHPQKATTELPLLRAALKETLRLYPVGLFLERVASSDLVLQNYHIPAGTLVRVFL 384

Query: 160 YTL 162
           Y+L
Sbjct: 385 YSL 387


>2ZUE-A nrPDB
          Length = 629

 Score = 27.3 bits (59), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 17/98 (17%)

Query: 10  GAKEDKPRPRNISREESLQLEGYKHACHALLHAPSQAKLFDRVPIRRVLLMMMRFDGRLG 69
           GA++  P+   ++ + +LQL G++ A   L H   +           V     +F GR G
Sbjct: 384 GAEQKHPQ---LAIKYALQLLGFEDAAANLYHLAYE----------HVERPEGKFSGRKG 430

Query: 70  FPGGFVDTRDISLEEGLKR--ELEEELGPALATVEVTE 105
              GF  T D  ++E +KR  EL EE  PAL+  E  E
Sbjct: 431 TWVGF--TVDEVIQEAVKRARELIEEKNPALSDEEKAE 466


>4V14-A nrPDB
          Length = 138

 Score = 26.9 bits (58), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 6/40 (15%)

Query: 66  GRLGFPGGFVDTRDISLEEGLKRELEEELGPALATVEVTE 105
           G   FPGG V+  + S E+ + RELEEE+G     + VTE
Sbjct: 38  GFWEFPGGKVEAGE-SREQAMVRELEEEIG-----ITVTE 71


>1UM9-A nrPDB
          Length = 367

 Score = 26.9 bits (58), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 3/59 (5%)

Query: 67  RLGFPGGFVDTRDISLEEGLKRELEEELGPALATVEVTEDDYRSSQVREHPQKCVTHFY 125
           R GF   F   RD  L   L   L+E LG  LAT     D  +  Q+ EHP     +F+
Sbjct: 85  RPGFDWVFPYYRDHGLALALGIPLKELLGQMLAT---KADPNKGRQMPEHPGSKALNFF 140


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

2A8R-A nrPDB                                                          360   e-100
3KVH-A nrPDB                                                          302   6e-83

Sequences not found previously or not previously below threshold:

2QJO-A nrPDB                                                           34   0.037
5XXB-D nrPDB                                                           32   0.19 
3VIK-A nrPDB                                                           30   0.91 
6CL4-A nrPDB                                                           30   0.92 
4C0D-A nrPDB                                                           28   2.3  
3GZ5-A nrPDB                                                           28   2.3  
5XXU-U nrPDB                                                           27   4.8  
5IKK-A nrPDB                                                           27   5.5  
3IGZ-B nrPDB                                                           26   8.7  


CONVERGED!
>2A8R-A nrPDB
          Length = 212

 Score =  360 bits (923), Expect = e-100,   Method: Composition-based stats.
 Identities = 212/212 (100%), Positives = 212/212 (100%)

Query: 1   MAESRSPDRGAKEDKPRPRNISREESLQLEGYKHACHALLHAPSQAKLFDRVPIRRVLLM 60
           MAESRSPDRGAKEDKPRPRNISREESLQLEGYKHACHALLHAPSQAKLFDRVPIRRVLLM
Sbjct: 1   MAESRSPDRGAKEDKPRPRNISREESLQLEGYKHACHALLHAPSQAKLFDRVPIRRVLLM 60

Query: 61  MMRFDGRLGFPGGFVDTRDISLEEGLKRELEEELGPALATVEVTEDDYRSSQVREHPQKC 120
           MMRFDGRLGFPGGFVDTRDISLEEGLKRELEEELGPALATVEVTEDDYRSSQVREHPQKC
Sbjct: 61  MMRFDGRLGFPGGFVDTRDISLEEGLKRELEEELGPALATVEVTEDDYRSSQVREHPQKC 120

Query: 121 VTHFYIKELKLEEIERIEAEAVNAKDHGLEVMGLIRVPLYTLRDRVGGLPAFLCNNFIGN 180
           VTHFYIKELKLEEIERIEAEAVNAKDHGLEVMGLIRVPLYTLRDRVGGLPAFLCNNFIGN
Sbjct: 121 VTHFYIKELKLEEIERIEAEAVNAKDHGLEVMGLIRVPLYTLRDRVGGLPAFLCNNFIGN 180

Query: 181 SKSQLLYALRSLKLLREDQIQEVLKASHRLQY 212
           SKSQLLYALRSLKLLREDQIQEVLKASHRLQY
Sbjct: 181 SKSQLLYALRSLKLLREDQIQEVLKASHRLQY 212


>3KVH-A nrPDB
          Length = 214

 Score =  302 bits (774), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 97/197 (49%), Positives = 135/197 (68%), Gaps = 5/197 (2%)

Query: 16  PRPRNISREESLQL-EGYKHACHALLHAPSQAKLFDRVPIRRVLLMMMRFDGRLGFPGGF 74
           P  + ISR E+++L  G+ H+CHA+L+A +  +LF R+P+R  +LM MRFDG LGFPGGF
Sbjct: 3   PELKQISRVEAMRLGPGWSHSCHAMLYAANPGQLFGRIPMRFSVLMQMRFDGLLGFPGGF 62

Query: 75  VDTRDISLEEGLKRELEEELGPALATVEVTEDDYRSSQVREHPQKCVTHFYIKELKLEEI 134
           VD R  SLE+GL R L   LG       +TE DY SS + E P + V H Y ++L LE++
Sbjct: 63  VDRRFWSLEDGLNRVLGLGLGCL----RLTEADYLSSHLTEGPHRVVAHLYARQLTLEQL 118

Query: 135 ERIEAEAVNAKDHGLEVMGLIRVPLYTLRDRVGGLPAFLCNNFIGNSKSQLLYALRSLKL 194
             +E  AV+++DHGLEV+GL+RVPLYT +DRVGG P FL N F+  +K QLL+AL+ L +
Sbjct: 119 HAVEISAVHSRDHGLEVLGLVRVPLYTQKDRVGGFPNFLSNAFVSTAKCQLLFALKVLNM 178

Query: 195 LREDQIQEVLKASHRLQ 211
           + E+++ E L A+   Q
Sbjct: 179 MPEEKLVEALAAATEKQ 195


>2QJO-A nrPDB
          Length = 341

 Score = 34.2 bits (77), Expect = 0.037,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 42/101 (41%), Gaps = 2/101 (1%)

Query: 66  GRLGFPGGFVDTRDISLEEGLKRELEEELGPALATVEVTEDDYRSSQVREHPQKCVTHFY 125
           G +  PGGF+   + +L EG+ REL+EE    +  + V       S V + P + +    
Sbjct: 228 GLIALPGGFIKQNE-TLVEGMLRELKEETRLKVP-LPVLRGSIVDSHVFDAPGRSLRGRT 285

Query: 126 IKELKLEEIERIEAEAVNAKDHGLEVMGLIRVPLYTLRDRV 166
           I      ++   E  AV   D   +   +    LY   +++
Sbjct: 286 ITHAYFIQLPGGELPAVKGGDDAQKAWWMSLADLYAQEEQI 326


>5XXB-D nrPDB
          Length = 310

 Score = 31.9 bits (71), Expect = 0.19,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 50/141 (35%), Gaps = 6/141 (4%)

Query: 65  DGRLGFPGGFVDTRDISLEEGLKRELEEELGPALATVEVTEDDYRSSQVREHPQKCVTHF 124
           DG L  P G       S  EG      +        + +   DY      E P+K    F
Sbjct: 167 DGGLHVPHGIKKFPGYSKPEGEGEGSYDPEAHRARILGLHVADYMRQLKEEDPEKYSAQF 226

Query: 125 YIKELKLEEIERIEAEAVNAKDHGLEVMGLIRVPLYTLRDRVGGLPAFLCNNFIGNSKSQ 184
              +    +IE  + EA+    H      + + P    ++R   +      N I  +K Q
Sbjct: 227 --SQYIKNKIEADDIEAMYKNAHA----QIRKNPDAVKKERAANVQNVRQGNVIKTAKGQ 280

Query: 185 LLYALRSLKLLREDQIQEVLK 205
            +  ++  K  R +++Q+ + 
Sbjct: 281 YVRHVKLTKAQRRERVQQKIA 301


>3VIK-A nrPDB
          Length = 487

 Score = 29.6 bits (65), Expect = 0.91,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 51/147 (34%), Gaps = 30/147 (20%)

Query: 80  ISLEEGLKRELEEELG---PALATVEVTEDDYRSSQVREHPQKCVTHFYIKELKLEEIER 136
           ++  +G   E+        P +        DY ++    H    + H Y +E + E+  +
Sbjct: 176 LTFMDGYASEIGMAPSINTPGIG-------DYLAAHTVIHAHARIYHLYDQEFRAEQGGK 228

Query: 137 IEAE--------AVNAKDHGLEV-------MGLIRVPLYTLRDRVGGLPAFLCNNFIGNS 181
           +           A N+ +            +GL   P++T     G  PA L +    NS
Sbjct: 229 VGISLNINWCEPATNSAEDRASCENYQQFNLGLYAHPIFTEE---GDYPAVLKDRVSRNS 285

Query: 182 KSQLLYALRSLKLLREDQIQEVLKASH 208
             +     R  +   E+   E ++ +H
Sbjct: 286 ADEGYTDSRLPQFTAEE--VEYIRGTH 310


>6CL4-A nrPDB
          Length = 313

 Score = 29.6 bits (65), Expect = 0.92,   Method: Composition-based stats.
 Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 7/68 (10%)

Query: 139 AEAVNAKDHGLEVMGLIRVPLYTLRDRVGGLPAFLCNNFIGNSKSQLLYALRSLKLLRED 198
             +VN  +HG EV  L+R+ L       G LP  + N  +  +  QLL AL     L + 
Sbjct: 123 VTSVNGVNHGSEVADLVRLALTP-----GRLPESIANAAMS-AFGQLLSALAGSPRLPQS 176

Query: 199 QIQEVLKA 206
            I E L+A
Sbjct: 177 GI-EALEA 183


>4C0D-A nrPDB
          Length = 812

 Score = 28.4 bits (62), Expect = 2.3,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 3/67 (4%)

Query: 118 QKCVTHFYIKEL--KLEEIERIEAEAVNAKDHGL-EVMGLIRVPLYTLRDRVGGLPAFLC 174
           ++ V H    +L   +E + RI A +      GL ++M ++R     + DR  G P F+ 
Sbjct: 214 ERSVAHVTEADLFHTIETLMRINAHSRGNAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMM 273

Query: 175 NNFIGNS 181
           ++ I  +
Sbjct: 274 HSGISQA 280


>3GZ5-A nrPDB
          Length = 240

 Score = 28.4 bits (62), Expect = 2.3,   Method: Composition-based stats.
 Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 1/31 (3%)

Query: 64 FDGRLGFPGGFVD-TRDISLEEGLKRELEEE 93
          F G  G PGGF+D T D SLE+ + R+L E+
Sbjct: 49 FLGLWGLPGGFIDETCDESLEQTVLRKLAEK 79


>5XXU-U nrPDB
          Length = 233

 Score = 27.3 bits (59), Expect = 4.8,   Method: Composition-based stats.
 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 3/47 (6%)

Query: 118 QKCVTHFYIKELKLEEIERIEAEAVN-AKDHGLEVMGLIRVPLYTLR 163
            +       K+LK   IER+  E +N AK+  L+V G +R+P+ TLR
Sbjct: 132 HRIRITLTSKDLK--SIERVCTELINGAKEKNLQVAGPVRLPVKTLR 176


>5IKK-A nrPDB
          Length = 657

 Score = 27.3 bits (59), Expect = 5.5,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 8/52 (15%)

Query: 13 EDKPR-PRNISRE-ESLQLEGYKHACHALLHAPSQAKLFDRVPIRRVLLMMM 62
          +D P  PR + R  E+++  GY      + + PS + +F R+P R   L  +
Sbjct: 45 DDHPEDPRRVLRVFEAIKKAGY------VSNVPSPSDVFLRIPAREATLEEL 90


>3IGZ-B nrPDB
          Length = 561

 Score = 26.5 bits (57), Expect = 8.7,   Method: Composition-based stats.
 Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)

Query: 49  FDRVPIRRVLLM-MMRFDGRLGFPGGFV 75
           FDRV + +V    MMR+DG LG P  F+
Sbjct: 301 FDRVRVPKVRYAGMMRYDGDLGIPNNFL 328


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.318    0.141    0.401 

Lambda     K      H
   0.267   0.0433    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,538,317
Number of Sequences: 36641
Number of extensions: 355163
Number of successful extensions: 786
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 771
Number of HSP's gapped (non-prelim): 39
length of query: 212
length of database: 10,336,785
effective HSP length: 93
effective length of query: 119
effective length of database: 6,929,172
effective search space: 824571468
effective search space used: 824571468
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.5 bits)