BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q6P1M3 (1020 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 6N8P-A nrPDB 1984 0.0 5NZU-C nrPDB 37 0.038 6HQA-B nrPDB 37 0.052 5MWJ-A nrPDB 35 0.14 5OV3-A nrPDB 34 0.28 2YNP-A nrPDB 34 0.31 3MKQ-A nrPDB 34 0.35 5NNZ-B nrPDB 34 0.39 4QHP-A nrPDB 34 0.40 5CXC-A nrPDB 33 0.43 5WLC-LN nrPDB 33 0.62 5WYK-BB nrPDB 33 0.83 5FVM-C nrPDB 32 0.98 6ID0-T nrPDB 32 1.2 6QX9-4B nrPDB 32 1.4 1XG7-A nrPDB 32 1.5 6MZM-G nrPDB 32 1.9 2H9P-A nrPDB 31 2.4 5M25-A nrPDB 31 2.4 2ZUK-A nrPDB 31 2.4 6F3T-A nrPDB 31 2.5 5JFC-L nrPDB 31 2.8 4BTS-AE nrPDB 31 3.0 2P9P-C nrPDB 30 3.7 6ELZ-p nrPDB 30 4.1 4YRY-B nrPDB 30 4.7 5VJ7-A nrPDB 30 5.0 6BX3-B nrPDB 30 5.4 5A9Q-0 nrPDB 30 5.5 >6N8P-A nrPDB Length = 979 Score = 1984 bits (5140), Expect = 0.0, Method: Compositional matrix adjust. Identities = 966/967 (99%), Positives = 967/967 (100%) Query: 12 VRERLKRDLFQFNKTVEHGFPHQPSALGYSPSLRILAIGTRSGAIKLYGAPGVEFMGLHQ 71 +RERLKRDLFQFNKTVEHGFPHQPSALGYSPSLRILAIGTRSGAIKLYGAPGVEFMGLHQ Sbjct: 1 MRERLKRDLFQFNKTVEHGFPHQPSALGYSPSLRILAIGTRSGAIKLYGAPGVEFMGLHQ 60 Query: 72 ENNAVTQIHLLPGQCQLVTLLDDNSLHLWSLKVKGGASELQEDESFTLRGPPGAAPSATQ 131 ENNAVTQIHLLPGQCQLVTLLDDNSLHLWSLKVKGGASELQEDESFTLRGPPGAAPSATQ Sbjct: 61 ENNAVTQIHLLPGQCQLVTLLDDNSLHLWSLKVKGGASELQEDESFTLRGPPGAAPSATQ 120 Query: 132 ITVVLPHSSCELLYLGTESGNVFVVQLPAFRALEDRTISSDAVLQRLPEEARHRRVFEMV 191 ITVVLPHSSCELLYLGTESGNVFVVQLPAFRALEDRTISSDAVLQRLPEEARHRRVFEMV Sbjct: 121 ITVVLPHSSCELLYLGTESGNVFVVQLPAFRALEDRTISSDAVLQRLPEEARHRRVFEMV 180 Query: 192 EALQEHPRDPNQILIGYSRGLVVIWDLQGSRVLYHFLSSQQLENIWWQRDGRLLVSCHSD 251 EALQEHPRDPNQILIGYSRGLVVIWDLQGSRVLYHFLSSQQLENIWWQRDGRLLVSCHSD Sbjct: 181 EALQEHPRDPNQILIGYSRGLVVIWDLQGSRVLYHFLSSQQLENIWWQRDGRLLVSCHSD 240 Query: 252 GSYCQWPVSSEAQQPEPLRSLVPYGPFPCKAITRILWLTTRQGLPFTIFQGGMPRASYGD 311 GSYCQWPVSSEAQQPEPLRSLVPYGPFPCKAITRILWLTTRQGLPFTIFQGGMPRASYGD Sbjct: 241 GSYCQWPVSSEAQQPEPLRSLVPYGPFPCKAITRILWLTTRQGLPFTIFQGGMPRASYGD 300 Query: 312 RHCISVIHDGQQTAFDFTSRVIGFTVLTEADPAATFDDPYALVVLAEEELVVIDLQTAGW 371 RHCISVIHDGQQTAFDFTSRVIGFTVLTEADPAATFDDPYALVVLAEEELVVIDLQTAGW Sbjct: 301 RHCISVIHDGQQTAFDFTSRVIGFTVLTEADPAATFDDPYALVVLAEEELVVIDLQTAGW 360 Query: 372 PPVQLPYLASLHCSAITCSHHVSNIPLKLWERIIAAGSRQNAHFSTMEWPIDGGTSLTPA 431 PPVQLPYLASLHCSAITCSHHVSNIPLKLWERIIAAGSRQNAHFSTMEWPIDGGTSLTPA Sbjct: 361 PPVQLPYLASLHCSAITCSHHVSNIPLKLWERIIAAGSRQNAHFSTMEWPIDGGTSLTPA 420 Query: 432 PPQRDLLLTGHEDGTVRFWDASGVCLRLLYKLSTVRVFLTDTDPNENFSAQGEDEWPPLR 491 PPQRDLLLTGHEDGTVRFWDASGVCLRLLYKLSTVRVFLTDTDPNENFSAQGEDEWPPLR Sbjct: 421 PPQRDLLLTGHEDGTVRFWDASGVCLRLLYKLSTVRVFLTDTDPNENFSAQGEDEWPPLR 480 Query: 492 KVGSFDPYSDDPRLGIQKIFLCKYSGYLAVAGTAGQVLVLELNDEAAEQAVEQVEADLLQ 551 KVGSFDPYSDDPRLGIQKIFLCKYSGYLAVAGTAGQVLVLELNDEAAEQAVEQVEADLLQ Sbjct: 481 KVGSFDPYSDDPRLGIQKIFLCKYSGYLAVAGTAGQVLVLELNDEAAEQAVEQVEADLLQ 540 Query: 552 DQEGYRWKGHERLAARSGPVRFEPGFQPFVLVQCQPPAVVTSLALHSEWRLVAFGTSHGF 611 DQEGYRWKGHERLAARSGPVRFEPGFQPFVLVQCQPPAVVTSLALHSEWRLVAFGTSHGF Sbjct: 541 DQEGYRWKGHERLAARSGPVRFEPGFQPFVLVQCQPPAVVTSLALHSEWRLVAFGTSHGF 600 Query: 612 GLFDHQQRRQVFVKCTLHPSDQLALEGPLSRVKSLKKSLRQSFRRMRRSRVSSRKRHPAG 671 GLFDHQQRRQVFVKCTLHPSDQLALEGPLSRVKSLKKSLRQSFRRMRRSRVSSRKRHPAG Sbjct: 601 GLFDHQQRRQVFVKCTLHPSDQLALEGPLSRVKSLKKSLRQSFRRMRRSRVSSRKRHPAG 660 Query: 672 PPGEAQEGSAKAERPGLQNMELAPVQRKIEARSAEDSFTGFVRTLYFADTYLKDSSRHCP 731 PPGEAQEGSAKAERPGLQNMELAPVQRKIEARSAEDSFTGFVRTLYFADTYLKDSSRHCP Sbjct: 661 PPGEAQEGSAKAERPGLQNMELAPVQRKIEARSAEDSFTGFVRTLYFADTYLKDSSRHCP 720 Query: 732 SLWAGTNGGTIYAFSLRVPPAERRMDEPVRAEQAKEIQLMHRAPVVGILVLDGHSVPLPE 791 SLWAGTNGGTIYAFSLRVPPAERRMDEPVRAEQAKEIQLMHRAPVVGILVLDGHSVPLPE Sbjct: 721 SLWAGTNGGTIYAFSLRVPPAERRMDEPVRAEQAKEIQLMHRAPVVGILVLDGHSVPLPE 780 Query: 792 PLEVAHDLSKSPDMQGSHQLLVVSEEQFKVFTLPKVSAKLKLKLTALEGSRVRRVSVAHF 851 PLEVAHDLSKSPDMQGSHQLLVVSEEQFKVFTLPKVSAKLKLKLTALEGSRVRRVSVAHF Sbjct: 781 PLEVAHDLSKSPDMQGSHQLLVVSEEQFKVFTLPKVSAKLKLKLTALEGSRVRRVSVAHF 840 Query: 852 GSRRAEDYGEHHLAVLTNLGDIQVVSLPLLKPQVRYSCIRREDVSGIASCVFTKYGQGFY 911 GSRRAEDYGEHHLAVLTNLGDIQVVSLPLLKPQVRYSCIRREDVSGIASCVFTKYGQGFY Sbjct: 841 GSRRAEDYGEHHLAVLTNLGDIQVVSLPLLKPQVRYSCIRREDVSGIASCVFTKYGQGFY 900 Query: 912 LISPSEFERFSLSTKWLVEPRCLVDSAETKNHRPGNGAGPKKAPSRARNSGTQSDGEEKQ 971 LISPSEFERFSLSTKWLVEPRCLVDSAETKNHRPGNGAGPKKAPSRARNSGTQSDGEEKQ Sbjct: 901 LISPSEFERFSLSTKWLVEPRCLVDSAETKNHRPGNGAGPKKAPSRARNSGTQSDGEEKQ 960 Query: 972 PGLVMER 978 PGLVMER Sbjct: 961 PGLVMER 967 >5NZU-C nrPDB Length = 905 Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust. Identities = 22/66 (33%), Positives = 32/66 (48%) Query: 433 PQRDLLLTGHEDGTVRFWDASGVCLRLLYKLSTVRVFLTDTDPNENFSAQGEDEWPPLRK 492 P+ +++TG EDGTVR W +S L RV+ + N A G DE + K Sbjct: 239 PELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVK 298 Query: 493 VGSFDP 498 +G +P Sbjct: 299 LGREEP 304 >6HQA-B nrPDB Length = 722 Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust. Identities = 72/294 (24%), Positives = 116/294 (39%), Gaps = 54/294 (18%) Query: 29 HGFPHQPSALGYSPSLRILAIGTRSGAIKLYGAPGVEFMGL------HQENN-------- 74 H + + L ++ ++A G + IKL+ G L +Q+NN Sbjct: 387 HNTNNDLTCLKFNDDSTMVASGFQDSFIKLWSIDGSPLRSLLKNDPYNQQNNDGVAVKGS 446 Query: 75 --------AVTQIHLLPGQCQLVTLLDDNSLHLWSLKV-------KGGASELQEDESFTL 119 AV + P L++ +D ++ LWSL KG +S + D F+ Sbjct: 447 RRLVGHSGAVYGVDFSPDNRYLISCSEDKTVRLWSLDTYTCLVSYKGHSSSVW-DVKFSP 505 Query: 120 RGPPGAAPSATQITVVLPHSSCELLY-LGTESGNVFVVQLPAFRALEDR--TISSDAVLQ 176 G A S Q + SC+ +Y L +G++ V F T SSD Sbjct: 506 MGHYFATASHDQTARLW---SCDHIYPLRIFAGHLNDVDCVEFHPNSTYLFTGSSDKT-A 561 Query: 177 RLPEEARHR--RVFE----MVEALQEHPRDPNQILIGYSRGLVVIWDLQGSRVLY----H 226 R+ + AR RVF + L P D + +V +WD+ R + H Sbjct: 562 RMWDIARGECVRVFMGHSGAINCLAVSP-DGRWLASAGEDSVVCLWDISTGRRIKAMRGH 620 Query: 227 FLSSQQLENIWWQRDGRLLVSCHSDGSYCQWPV----SSEAQQPEPLRSLVPYG 276 SS + ++ + R+G +LVS +D S W V +S + QPEP+ + G Sbjct: 621 GRSS--IYSLAFSREGTVLVSTGADNSVRVWDVKKNTNSPSAQPEPINDVTAQG 672 >5MWJ-A nrPDB Length = 337 Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust. Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 2/101 (1%) Query: 19 DLFQFNKTVEHGFPHQPSALGYSPSLRILAIGTRSGAIKLYGAPGVEFMGLHQENNAVTQ 78 DL + + +H F Q +LGY P+ LA+G S +++ + LH + V Sbjct: 211 DLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLS 270 Query: 79 IHLLPGQCQLVTLLDDNSLHLWSLKVKGGASELQEDESFTL 119 + V+ DN L+ W + GAS Q ES ++ Sbjct: 271 LKFAYCGKWFVSTGKDNLLNAW--RTPYGASIFQSKESSSV 309 >5OV3-A nrPDB Length = 381 Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 3/60 (5%) Query: 204 ILIGYSRGLVVIWDLQGSRVLYHFLSSQ--QLENIWWQRDGRLLVSCHSDGSYCQWPVSS 261 + +G + G +VIWD +R + +S+ + ++ W RDG LVS +D QW V S Sbjct: 40 LAVGCNDGRIVIWDFL-TRGIAKIISAHIHPVCSLCWSRDGHKLVSASTDNIVSQWDVLS 98 >2YNP-A nrPDB Length = 604 Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust. Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 22/181 (12%) Query: 433 PQRDLLLTGHEDGTVRFWDASGVCLRLLYKLSTVRVFLTDTDPN--ENFSAQGEDEWPPL 490 P ++++G EDGT++ W++S + + R + T P +N+ A G D + Sbjct: 238 PTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTV 297 Query: 491 RKVGSFDPYSDDPRLGIQKIFLCKYSGYLAVAGTAGQVLVLELNDEAAEQAVEQVEADLL 550 +G +D+P L + + +SG A + V+ N+E VEQ E L Sbjct: 298 LSLG-----NDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEE-----VEQDEPLSL 347 Query: 551 QDQEGYRWKGHERLAARSGPVRFEPGFQPFVLVQCQPPAVVTSLALHSEWRLVAFGTSHG 610 Q +E + A S RF +V + T+LA WR AFG Sbjct: 348 QTKELGSVDVFPQSLAHSPNGRF------VTVVGDGEYVIYTALA----WRNKAFGKCQD 397 Query: 611 F 611 F Sbjct: 398 F 398 >3MKQ-A nrPDB Length = 814 Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust. Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 22/181 (12%) Query: 433 PQRDLLLTGHEDGTVRFWDASGVCLRLLYKLSTVRVFLTDTDPN--ENFSAQGEDEWPPL 490 P ++++G EDGT++ W++S + + R + T P +N+ A G D + Sbjct: 238 PTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTV 297 Query: 491 RKVGSFDPYSDDPRLGIQKIFLCKYSGYLAVAGTAGQVLVLELNDEAAEQAVEQVEADLL 550 +G +D+P L + + +SG A + V+ N+E VEQ E L Sbjct: 298 LSLG-----NDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEE-----VEQDEPLSL 347 Query: 551 QDQEGYRWKGHERLAARSGPVRFEPGFQPFVLVQCQPPAVVTSLALHSEWRLVAFGTSHG 610 Q +E + A S RF +V + T+LA WR AFG Sbjct: 348 QTKELGSVDVFPQSLAHSPNGRF------VTVVGDGEYVIYTALA----WRNKAFGKCQD 397 Query: 611 F 611 F Sbjct: 398 F 398 >5NNZ-B nrPDB Length = 415 Score = 33.9 bits (76), Expect = 0.39, Method: Compositional matrix adjust. Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 1/39 (2%) Query: 423 DGGTSLTPAPPQRDLLLTGHEDGTVRFWDA-SGVCLRLL 460 +G S PQ + LLTG D T R WDA +G CL++L Sbjct: 345 EGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVL 383 >4QHP-A nrPDB Length = 870 Score = 33.9 bits (76), Expect = 0.40, Method: Compositional matrix adjust. Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 1/66 (1%) Query: 91 LLDDNSLHLWSLKVKGGASE-LQEDESFTLRGPPGAAPSATQITVVLPHSSCELLYLGTE 149 L+ D S L S+K+ G A++ + E E+ T+ G P + T +LP + L+ L Sbjct: 52 LVLDGSAKLLSVKINGAAADYVLEGETLTIAGVPSERFTVEVETEILPAENKSLMGLYAS 111 Query: 150 SGNVFV 155 GN+F Sbjct: 112 GGNLFT 117 >5CXC-A nrPDB Length = 510 Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust. Identities = 55/223 (24%), Positives = 85/223 (38%), Gaps = 43/223 (19%) Query: 237 WWQRDG--RLLVSCHSDGSYCQWPVSSEAQQPEPLRSLVPYGPFPCKAITRILWLTTRQG 294 W DG + +++ +DG+ W +S+A PEP SL+P G K ++T Q Sbjct: 245 WLDVDGHSKHILTASADGAIGFWS-ASKASAPEPDASLLP-GAHVSKRRKATSSVSTAQR 302 Query: 295 LPFTIFQGGMPRASYGDRHCISVIHDGQQTA--FDFTSRVIGFTVLTEADPAATFDDPYA 352 P ++ IH TA FD R + ++ ++ T D Sbjct: 303 GPLGLWS----------------IHTAPATAAIFDPRDRTVAYSA-SQDHTVRTLDLTTG 345 Query: 353 LVV----LAEEELVVIDLQTAGWPPVQLPYLASLHCSAITCSHHVSNIPLKLWERIIAAG 408 VV L L + L AG P LA A T + H++ + + Sbjct: 346 QVVSTLTLTHPLLSLSALTRAG---TTSPLLA-----AGTSARHITMVDPR--------A 389 Query: 409 SRQNAHFSTMEWPIDGGTSLTPAPPQRDLLLTGHEDGTVRFWD 451 S T+ + SL+P+P L++G DGT R WD Sbjct: 390 SSATTSVMTLRGHANKVVSLSPSPENEYSLVSGSHDGTCRVWD 432 >5WLC-LN nrPDB Length = 776 Score = 33.1 bits (74), Expect = 0.62, Method: Compositional matrix adjust. Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%) Query: 433 PQRDLLLTGHEDGTVRFWDASGVCLRLLYKL--STVRVFLTDTDPNENFSA 481 P+ D + +G G+++FWD L +K + V TDTD N FSA Sbjct: 248 PRTDQIASGDSTGSIKFWDFQFATLNQSFKAHDADVLCLTTDTDNNYVFSA 298 >5WYK-BB nrPDB Length = 943 Score = 32.7 bits (73), Expect = 0.83, Method: Compositional matrix adjust. Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 1/69 (1%) Query: 196 EHPRDPNQILIGYSRGLVVIWDLQGSRVLYHFLSSQ-QLENIWWQRDGRLLVSCHSDGSY 254 E +D + + +GY+ G++ +WDL VL +F + + + + G L+S D + Sbjct: 86 EAHKDTDLLAVGYADGVIKVWDLMSKTVLLNFNGHKAAITLLQFDGTGTRLISGSKDSNI 145 Query: 255 CQWPVSSEA 263 W + E Sbjct: 146 IVWDLVGEV 154 Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust. Identities = 38/183 (20%), Positives = 70/183 (38%), Gaps = 31/183 (16%) Query: 83 PGQCQLVTLLDDNSLHLWSLKVKGGASELQEDESFTLRGPPGAAPSA----TQITVVLPH 138 PGQ + + L+D +++W +K S+L + PPGA+ + + T + H Sbjct: 38 PGQL-ITSALED--VNIWDIKTGDLVSKLSDGL------PPGASDARGAKPAECTYLEAH 88 Query: 139 SSCELLYLGTESGNVFVVQLPAFRALEDRTISSDAVLQRLPEEARHRRVFEMVEALQEHP 198 +LL +G G + V L + L + A+ L + Sbjct: 89 KDTDLLAVGYADGVIKVWDLMSKTVLLNFNGHKAAI------------------TLLQFD 130 Query: 199 RDPNQILIGYSRGLVVIWDLQGSRVLYHFLSSQQLENIWWQRDGRLLVSCHSDGSYCQWP 258 +++ G +++WDL G LY S + +W + L+S DG W Sbjct: 131 GTGTRLISGSKDSNIIVWDLVGEVGLYKLRSHKDSITGFWCQGEDWLISTSKDGMIKLWD 190 Query: 259 VSS 261 + + Sbjct: 191 LKT 193 >5FVM-C nrPDB Length = 303 Score = 32.3 bits (72), Expect = 0.98, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 51/124 (41%), Gaps = 13/124 (10%) Query: 36 SALGYSPSLRILAIGTRSGAIKLYGAPGVEFMGLHQENNAVTQIHLLPGQCQLVTLLDDN 95 +++ + R + + G IK++ ++ N V ++ + P Q +L++ D Sbjct: 79 TSIAFQQENRWMVSSSEDGTIKVWDVRSPSVQRNYKHNAPVNEVAIHPNQGELISCDQDG 138 Query: 96 SLHLWSLKVKGGASELQEDESFTLRGPPGAAPSATQITVVLPHSSCELLYLGTESGNVFV 155 ++ +W L ++L +++ L+ A S +L G GN +V Sbjct: 139 NIRIWDLGENQCTNQLTPEDNTPLQSLSVA-------------SDGSMLVAGNNKGNCYV 185 Query: 156 VQLP 159 ++P Sbjct: 186 WRMP 189 >6ID0-T nrPDB Length = 514 Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust. Identities = 18/85 (21%), Positives = 35/85 (41%), Gaps = 3/85 (3%) Query: 21 FQFNKTVEHGFPHQPSALGYS--PSLRILAIGTRSGAIKLYGA-PGVEFMGLHQENNAVT 77 ++NK + H H + G P++ +L +R +++ L NAV Sbjct: 275 LEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVA 334 Query: 78 QIHLLPGQCQLVTLLDDNSLHLWSL 102 + + Q++T D ++ LW L Sbjct: 335 TVRCQAAEPQIITGSHDTTIRLWDL 359 >6QX9-4B nrPDB Length = 522 Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust. Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 9/72 (12%) Query: 40 YSPSLRILAIGTRSGAIKLYGAPGVEFMGL---HQENNAVTQIH------LLPGQCQLVT 90 +SP+ ++LA SG KL+ P + H N H L P L + Sbjct: 239 FSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDPKDVNLAS 298 Query: 91 LLDDNSLHLWSL 102 D S+ LWSL Sbjct: 299 CAADGSVKLWSL 310 >1XG7-A nrPDB Length = 250 Score = 32.0 bits (71), Expect = 1.5, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 1/58 (1%) Query: 373 PVQLPYLASLHCSAITCSHHVSNIPLKLWERIIAAGSRQNAHFSTMEWPIDGGTSLTP 430 P+++P L ++T S P K W +I H ++ WP+ G LTP Sbjct: 176 PMEIPIPEDLRIKSVT-SKLTQEKPTKFWMKIGQESGVPPLHIDSLIWPLLGNADLTP 232 >6MZM-G nrPDB Length = 800 Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust. Identities = 21/69 (30%), Positives = 27/69 (39%), Gaps = 10/69 (14%) Query: 433 PQRDLLLTGHEDGTVRFWDASGVCLRLLYKLSTVRVFLTDTDPNENFSAQG--------- 483 P R+ LL+ EDGTVR W + YK V+ T P + G Sbjct: 553 PDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLW 612 Query: 484 -EDEWPPLR 491 D + PLR Sbjct: 613 ATDHYQPLR 621 >2H9P-A nrPDB Length = 329 Score = 31.2 bits (69), Expect = 2.4, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%) Query: 433 PQRDLLLTGHEDGTVRFWDA-SGVCLRLL 460 PQ +L+++G D +VR WD +G CL+ L Sbjct: 134 PQSNLIVSGSFDESVRIWDVKTGKCLKTL 162 >5M25-A nrPDB Length = 434 Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust. Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%) Query: 433 PQRDLLLTGHEDGTVRFWDA-SGVCLRLL 460 PQ +L+++G D +VR WD +G CL+ L Sbjct: 239 PQSNLIVSGSFDESVRIWDVKTGKCLKTL 267 >2ZUK-A nrPDB Length = 439 Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 10/78 (12%) Query: 753 ERRMDEPVRAEQAKEIQLMHRAPVVGILV----LDGHSVPLPEPLEVAH-DLSKSPDM-- 805 +R+ EP RAE AK L++RA +G++V ++G+ + PL + D+ K+ D+ Sbjct: 363 DRQSREPARAETAK---LIYRAYQLGLVVYYVGMNGNVLEFTPPLTITETDIHKALDLLD 419 Query: 806 QGSHQLLVVSEEQFKVFT 823 + +L VS E+ F Sbjct: 420 RAFSELSAVSNEEIAQFA 437 >6F3T-A nrPDB Length = 608 Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust. Identities = 21/69 (30%), Positives = 27/69 (39%), Gaps = 10/69 (14%) Query: 433 PQRDLLLTGHEDGTVRFWDASGVCLRLLYKLSTVRVFLTDTDPNENFSAQG--------- 483 P R+ LL+ EDGTVR W + YK V+ T P + G Sbjct: 361 PDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLW 420 Query: 484 -EDEWPPLR 491 D + PLR Sbjct: 421 ATDHYQPLR 429 >5JFC-L nrPDB Length = 474 Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust. Identities = 13/34 (38%), Positives = 22/34 (64%) Query: 49 IGTRSGAIKLYGAPGVEFMGLHQENNAVTQIHLL 82 IGT +G ++Y PGV G++ N +T+I+L+ Sbjct: 245 IGTGAGTPRIYPWPGVNLNGIYSANEFLTRINLM 278 >4BTS-AE nrPDB Length = 296 Score = 30.8 bits (68), Expect = 3.0, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 32/63 (50%) Query: 750 PPAERRMDEPVRAEQAKEIQLMHRAPVVGILVLDGHSVPLPEPLEVAHDLSKSPDMQGSH 809 P +RR D+ Q K +L+ + + + +S+P+ EP + H K+ D+Q H Sbjct: 16 PRGDRRGDKNDWQPQTKLGRLVKYGKISSLDEIFKYSIPIKEPEIIDHFYPKNKDVQAEH 75 Query: 810 QLL 812 +L+ Sbjct: 76 KLM 78 >2P9P-C nrPDB Length = 372 Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 38/79 (48%), Gaps = 4/79 (5%) Query: 29 HGFPHQP-SALGYSPSLRILAIGTRSGAIKLYGAPGVEFMGLHQ---ENNAVTQIHLLPG 84 H F +P S ++ +AI + + +Y G +++ +H+ N VT + P Sbjct: 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPD 63 Query: 85 QCQLVTLLDDNSLHLWSLK 103 ++VT D + ++W+LK Sbjct: 64 SNRIVTCGTDRNAYVWTLK 82 >6ELZ-p nrPDB Length = 460 Score = 30.4 bits (67), Expect = 4.1, Method: Compositional matrix adjust. Identities = 33/135 (24%), Positives = 55/135 (40%), Gaps = 24/135 (17%) Query: 322 QQTAFDFTSRVIGFTVLTEADPAATFDDPYALVVLAEEELVVIDLQTAGWPPVQLPYLAS 381 +Q FD T +G++V ++ T+D +V A ID +T + + + L++ Sbjct: 291 EQVIFDSTDNTVGYSV-SQDHTIKTWD-----LVTAR----CIDTRTTSYSLLSIAQLST 340 Query: 382 LHCSAITCSHHVSNIPLKLWERIIAAGSRQNAHFSTMEWPIDGG----TSLTPAPPQRDL 437 L+ A C +I L R A + + G +SL P + Sbjct: 341 LNLLA--CGSSARHITLH--------DPRVGASSKVTQQQLIGHKNFVSSLDTCPENEYI 390 Query: 438 LLTGHEDGTVRFWDA 452 L +G DGTV+ WD Sbjct: 391 LCSGSHDGTVKVWDV 405 >4YRY-B nrPDB Length = 468 Score = 30.4 bits (67), Expect = 4.7, Method: Compositional matrix adjust. Identities = 12/34 (35%), Positives = 20/34 (58%) Query: 49 IGTRSGAIKLYGAPGVEFMGLHQENNAVTQIHLL 82 IGT +G K G PG G++ N +T+++L+ Sbjct: 231 IGTGAGTPKFMGIPGTNLNGVYSANEFLTRVNLM 264 >5VJ7-A nrPDB Length = 476 Score = 30.0 bits (66), Expect = 5.0, Method: Compositional matrix adjust. Identities = 13/34 (38%), Positives = 21/34 (61%) Query: 49 IGTRSGAIKLYGAPGVEFMGLHQENNAVTQIHLL 82 IGT +G KL PG+ G++ N +T+I+L+ Sbjct: 245 IGTGAGTPKLPNIPGINLNGIYSANEFLTRINLM 278 >6BX3-B nrPDB Length = 412 Score = 30.0 bits (66), Expect = 5.4, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 7/104 (6%) Query: 173 AVLQRLPEEARHRRVFEM-VEALQEHPRDPNQILIGYSRGLVVIWDLQGSRVLY---HFL 228 AVL+ PE+ H + E LQ P + + +G + G +VI+D+ R + + L Sbjct: 9 AVLKEHPEKLTHTIENPLRTECLQFSPCG-DYLALGCANGALVIYDMDTFRPICVPGNML 67 Query: 229 SSQQ--LENIWWQRDGRLLVSCHSDGSYCQWPVSSEAQQPEPLR 270 + + +I W DGRLL++ D S W +S ++ + +R Sbjct: 68 GAHVRPITSIAWSPDGRLLLTSSRDWSIKLWDLSKPSKPLKEIR 111 >5A9Q-0 nrPDB Length = 380 Score = 30.0 bits (66), Expect = 5.5, Method: Compositional matrix adjust. Identities = 18/84 (21%), Positives = 35/84 (41%), Gaps = 7/84 (8%) Query: 191 VEALQEHPRDPNQILIGYSRGLVVIWDLQGSRVLYHFLSSQQLENIWWQ-----RDGRLL 245 + + HP + + G G++ IWD++ + L + + E W+ + L Sbjct: 220 LHCVDRHPNQQHVVATGGQDGMLSIWDVRQGTMPVSLLKAHEAEM--WEVHFHPSNPEHL 277 Query: 246 VSCHSDGSYCQWPVSSEAQQPEPL 269 +C DGS W S++ + L Sbjct: 278 FTCSEDGSLWHWDASTDVPEKSSL 301 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 6N8P-A nrPDB 2053 0.0 Sequences not found previously or not previously below threshold: 5NZU-C nrPDB 39 0.013 5CXC-A nrPDB 38 0.025 3MKQ-A nrPDB 37 0.035 2YNP-A nrPDB 37 0.035 6HQA-B nrPDB 36 0.077 6BX3-B nrPDB 36 0.078 5OV3-A nrPDB 36 0.082 5MWJ-A nrPDB 36 0.085 5NNZ-B nrPDB 35 0.14 4QHP-A nrPDB 35 0.23 5WLC-LN nrPDB 34 0.28 5FVM-C nrPDB 33 0.49 6F3T-A nrPDB 33 0.60 2ZUK-A nrPDB 33 0.60 5A9Q-0 nrPDB 33 0.63 1XG7-A nrPDB 33 0.68 6MZM-G nrPDB 33 0.75 5WYK-BB nrPDB 32 1.1 4BTS-AE nrPDB 32 1.3 5JFC-L nrPDB 32 1.6 5M25-A nrPDB 32 1.6 2H9P-A nrPDB 32 1.6 6QX9-4B nrPDB 32 2.0 6ELZ-p nrPDB 32 2.2 6ID0-T nrPDB 31 2.9 3C0Q-A nrPDB 31 3.3 5VJ7-A nrPDB 30 4.0 4YRY-B nrPDB 30 4.3 3JZG-A nrPDB 30 4.8 6EMK-B nrPDB 30 6.8 CONVERGED! >6N8P-A nrPDB Length = 979 Score = 2053 bits (5319), Expect = 0.0, Method: Composition-based stats. Identities = 966/967 (99%), Positives = 967/967 (100%) Query: 12 VRERLKRDLFQFNKTVEHGFPHQPSALGYSPSLRILAIGTRSGAIKLYGAPGVEFMGLHQ 71 +RERLKRDLFQFNKTVEHGFPHQPSALGYSPSLRILAIGTRSGAIKLYGAPGVEFMGLHQ Sbjct: 1 MRERLKRDLFQFNKTVEHGFPHQPSALGYSPSLRILAIGTRSGAIKLYGAPGVEFMGLHQ 60 Query: 72 ENNAVTQIHLLPGQCQLVTLLDDNSLHLWSLKVKGGASELQEDESFTLRGPPGAAPSATQ 131 ENNAVTQIHLLPGQCQLVTLLDDNSLHLWSLKVKGGASELQEDESFTLRGPPGAAPSATQ Sbjct: 61 ENNAVTQIHLLPGQCQLVTLLDDNSLHLWSLKVKGGASELQEDESFTLRGPPGAAPSATQ 120 Query: 132 ITVVLPHSSCELLYLGTESGNVFVVQLPAFRALEDRTISSDAVLQRLPEEARHRRVFEMV 191 ITVVLPHSSCELLYLGTESGNVFVVQLPAFRALEDRTISSDAVLQRLPEEARHRRVFEMV Sbjct: 121 ITVVLPHSSCELLYLGTESGNVFVVQLPAFRALEDRTISSDAVLQRLPEEARHRRVFEMV 180 Query: 192 EALQEHPRDPNQILIGYSRGLVVIWDLQGSRVLYHFLSSQQLENIWWQRDGRLLVSCHSD 251 EALQEHPRDPNQILIGYSRGLVVIWDLQGSRVLYHFLSSQQLENIWWQRDGRLLVSCHSD Sbjct: 181 EALQEHPRDPNQILIGYSRGLVVIWDLQGSRVLYHFLSSQQLENIWWQRDGRLLVSCHSD 240 Query: 252 GSYCQWPVSSEAQQPEPLRSLVPYGPFPCKAITRILWLTTRQGLPFTIFQGGMPRASYGD 311 GSYCQWPVSSEAQQPEPLRSLVPYGPFPCKAITRILWLTTRQGLPFTIFQGGMPRASYGD Sbjct: 241 GSYCQWPVSSEAQQPEPLRSLVPYGPFPCKAITRILWLTTRQGLPFTIFQGGMPRASYGD 300 Query: 312 RHCISVIHDGQQTAFDFTSRVIGFTVLTEADPAATFDDPYALVVLAEEELVVIDLQTAGW 371 RHCISVIHDGQQTAFDFTSRVIGFTVLTEADPAATFDDPYALVVLAEEELVVIDLQTAGW Sbjct: 301 RHCISVIHDGQQTAFDFTSRVIGFTVLTEADPAATFDDPYALVVLAEEELVVIDLQTAGW 360 Query: 372 PPVQLPYLASLHCSAITCSHHVSNIPLKLWERIIAAGSRQNAHFSTMEWPIDGGTSLTPA 431 PPVQLPYLASLHCSAITCSHHVSNIPLKLWERIIAAGSRQNAHFSTMEWPIDGGTSLTPA Sbjct: 361 PPVQLPYLASLHCSAITCSHHVSNIPLKLWERIIAAGSRQNAHFSTMEWPIDGGTSLTPA 420 Query: 432 PPQRDLLLTGHEDGTVRFWDASGVCLRLLYKLSTVRVFLTDTDPNENFSAQGEDEWPPLR 491 PPQRDLLLTGHEDGTVRFWDASGVCLRLLYKLSTVRVFLTDTDPNENFSAQGEDEWPPLR Sbjct: 421 PPQRDLLLTGHEDGTVRFWDASGVCLRLLYKLSTVRVFLTDTDPNENFSAQGEDEWPPLR 480 Query: 492 KVGSFDPYSDDPRLGIQKIFLCKYSGYLAVAGTAGQVLVLELNDEAAEQAVEQVEADLLQ 551 KVGSFDPYSDDPRLGIQKIFLCKYSGYLAVAGTAGQVLVLELNDEAAEQAVEQVEADLLQ Sbjct: 481 KVGSFDPYSDDPRLGIQKIFLCKYSGYLAVAGTAGQVLVLELNDEAAEQAVEQVEADLLQ 540 Query: 552 DQEGYRWKGHERLAARSGPVRFEPGFQPFVLVQCQPPAVVTSLALHSEWRLVAFGTSHGF 611 DQEGYRWKGHERLAARSGPVRFEPGFQPFVLVQCQPPAVVTSLALHSEWRLVAFGTSHGF Sbjct: 541 DQEGYRWKGHERLAARSGPVRFEPGFQPFVLVQCQPPAVVTSLALHSEWRLVAFGTSHGF 600 Query: 612 GLFDHQQRRQVFVKCTLHPSDQLALEGPLSRVKSLKKSLRQSFRRMRRSRVSSRKRHPAG 671 GLFDHQQRRQVFVKCTLHPSDQLALEGPLSRVKSLKKSLRQSFRRMRRSRVSSRKRHPAG Sbjct: 601 GLFDHQQRRQVFVKCTLHPSDQLALEGPLSRVKSLKKSLRQSFRRMRRSRVSSRKRHPAG 660 Query: 672 PPGEAQEGSAKAERPGLQNMELAPVQRKIEARSAEDSFTGFVRTLYFADTYLKDSSRHCP 731 PPGEAQEGSAKAERPGLQNMELAPVQRKIEARSAEDSFTGFVRTLYFADTYLKDSSRHCP Sbjct: 661 PPGEAQEGSAKAERPGLQNMELAPVQRKIEARSAEDSFTGFVRTLYFADTYLKDSSRHCP 720 Query: 732 SLWAGTNGGTIYAFSLRVPPAERRMDEPVRAEQAKEIQLMHRAPVVGILVLDGHSVPLPE 791 SLWAGTNGGTIYAFSLRVPPAERRMDEPVRAEQAKEIQLMHRAPVVGILVLDGHSVPLPE Sbjct: 721 SLWAGTNGGTIYAFSLRVPPAERRMDEPVRAEQAKEIQLMHRAPVVGILVLDGHSVPLPE 780 Query: 792 PLEVAHDLSKSPDMQGSHQLLVVSEEQFKVFTLPKVSAKLKLKLTALEGSRVRRVSVAHF 851 PLEVAHDLSKSPDMQGSHQLLVVSEEQFKVFTLPKVSAKLKLKLTALEGSRVRRVSVAHF Sbjct: 781 PLEVAHDLSKSPDMQGSHQLLVVSEEQFKVFTLPKVSAKLKLKLTALEGSRVRRVSVAHF 840 Query: 852 GSRRAEDYGEHHLAVLTNLGDIQVVSLPLLKPQVRYSCIRREDVSGIASCVFTKYGQGFY 911 GSRRAEDYGEHHLAVLTNLGDIQVVSLPLLKPQVRYSCIRREDVSGIASCVFTKYGQGFY Sbjct: 841 GSRRAEDYGEHHLAVLTNLGDIQVVSLPLLKPQVRYSCIRREDVSGIASCVFTKYGQGFY 900 Query: 912 LISPSEFERFSLSTKWLVEPRCLVDSAETKNHRPGNGAGPKKAPSRARNSGTQSDGEEKQ 971 LISPSEFERFSLSTKWLVEPRCLVDSAETKNHRPGNGAGPKKAPSRARNSGTQSDGEEKQ Sbjct: 901 LISPSEFERFSLSTKWLVEPRCLVDSAETKNHRPGNGAGPKKAPSRARNSGTQSDGEEKQ 960 Query: 972 PGLVMER 978 PGLVMER Sbjct: 961 PGLVMER 967 >5NZU-C nrPDB Length = 905 Score = 38.8 bits (89), Expect = 0.013, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 32/66 (48%) Query: 433 PQRDLLLTGHEDGTVRFWDASGVCLRLLYKLSTVRVFLTDTDPNENFSAQGEDEWPPLRK 492 P+ +++TG EDGTVR W +S L RV+ + N A G DE + K Sbjct: 239 PELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVK 298 Query: 493 VGSFDP 498 +G +P Sbjct: 299 LGREEP 304 >5CXC-A nrPDB Length = 510 Score = 37.7 bits (86), Expect = 0.025, Method: Composition-based stats. Identities = 56/227 (24%), Positives = 86/227 (37%), Gaps = 43/227 (18%) Query: 237 WWQRDG--RLLVSCHSDGSYCQWPVSSEAQQPEPLRSLVPYGPFPCKAITRILWLTTRQG 294 W DG + +++ +DG+ W +S+A PEP SL+P G K ++T Q Sbjct: 245 WLDVDGHSKHILTASADGAIGFWS-ASKASAPEPDASLLP-GAHVSKRRKATSSVSTAQR 302 Query: 295 LPFTIFQGGMPRASYGDRHCISVIHDGQQTA--FDFTSRVIGFTVLTEADPAATFDDPYA 352 P ++ IH TA FD R + ++ ++ T D Sbjct: 303 GPLGLWS----------------IHTAPATAAIFDPRDRTVAYSA-SQDHTVRTLDLTTG 345 Query: 353 LVV----LAEEELVVIDLQTAGWPPVQLPYLASLHCSAITCSHHVSNIPLKLWERIIAAG 408 VV L L + L AG P LA A T + H++ + + Sbjct: 346 QVVSTLTLTHPLLSLSALTRAG---TTSPLLA-----AGTSARHITMVDPR--------A 389 Query: 409 SRQNAHFSTMEWPIDGGTSLTPAPPQRDLLLTGHEDGTVRFWDASGV 455 S T+ + SL+P+P L++G DGT R WD V Sbjct: 390 SSATTSVMTLRGHANKVVSLSPSPENEYSLVSGSHDGTCRVWDLRSV 436 >3MKQ-A nrPDB Length = 814 Score = 37.3 bits (85), Expect = 0.035, Method: Composition-based stats. Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 22/181 (12%) Query: 433 PQRDLLLTGHEDGTVRFWDASGVCLRLLYKLSTVRVFLTDTDPN--ENFSAQGEDEWPPL 490 P ++++G EDGT++ W++S + + R + T P +N+ A G D + Sbjct: 238 PTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTV 297 Query: 491 RKVGSFDPYSDDPRLGIQKIFLCKYSGYLAVAGTAGQVLVLELNDEAAEQAVEQVEADLL 550 +G +D+P L + + +SG A + V+ N+E VEQ E L Sbjct: 298 LSLG-----NDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEE-----VEQDEPLSL 347 Query: 551 QDQEGYRWKGHERLAARSGPVRFEPGFQPFVLVQCQPPAVVTSLALHSEWRLVAFGTSHG 610 Q +E + A S RF +V + T+LA WR AFG Sbjct: 348 QTKELGSVDVFPQSLAHSPNGRF------VTVVGDGEYVIYTALA----WRNKAFGKCQD 397 Query: 611 F 611 F Sbjct: 398 F 398 >2YNP-A nrPDB Length = 604 Score = 37.3 bits (85), Expect = 0.035, Method: Composition-based stats. Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 22/181 (12%) Query: 433 PQRDLLLTGHEDGTVRFWDASGVCLRLLYKLSTVRVFLTDTDPN--ENFSAQGEDEWPPL 490 P ++++G EDGT++ W++S + + R + T P +N+ A G D + Sbjct: 238 PTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTV 297 Query: 491 RKVGSFDPYSDDPRLGIQKIFLCKYSGYLAVAGTAGQVLVLELNDEAAEQAVEQVEADLL 550 +G +D+P L + + +SG A + V+ N+E VEQ E L Sbjct: 298 LSLG-----NDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEE-----VEQDEPLSL 347 Query: 551 QDQEGYRWKGHERLAARSGPVRFEPGFQPFVLVQCQPPAVVTSLALHSEWRLVAFGTSHG 610 Q +E + A S RF +V + T+LA WR AFG Sbjct: 348 QTKELGSVDVFPQSLAHSPNGRF------VTVVGDGEYVIYTALA----WRNKAFGKCQD 397 Query: 611 F 611 F Sbjct: 398 F 398 >6HQA-B nrPDB Length = 722 Score = 36.1 bits (82), Expect = 0.077, Method: Composition-based stats. Identities = 72/294 (24%), Positives = 116/294 (39%), Gaps = 54/294 (18%) Query: 29 HGFPHQPSALGYSPSLRILAIGTRSGAIKLYGAPGVEFMGL------HQENN-------- 74 H + + L ++ ++A G + IKL+ G L +Q+NN Sbjct: 387 HNTNNDLTCLKFNDDSTMVASGFQDSFIKLWSIDGSPLRSLLKNDPYNQQNNDGVAVKGS 446 Query: 75 --------AVTQIHLLPGQCQLVTLLDDNSLHLWSLKV-------KGGASELQEDESFTL 119 AV + P L++ +D ++ LWSL KG +S + D F+ Sbjct: 447 RRLVGHSGAVYGVDFSPDNRYLISCSEDKTVRLWSLDTYTCLVSYKGHSSSVW-DVKFSP 505 Query: 120 RGPPGAAPSATQITVVLPHSSCELLY-LGTESGNVFVVQLPAFRALEDR--TISSDAVLQ 176 G A S Q + SC+ +Y L +G++ V F T SSD Sbjct: 506 MGHYFATASHDQTARLW---SCDHIYPLRIFAGHLNDVDCVEFHPNSTYLFTGSSDKT-A 561 Query: 177 RLPEEARHR--RVFE----MVEALQEHPRDPNQILIGYSRGLVVIWDLQGSRVLY----H 226 R+ + AR RVF + L P D + +V +WD+ R + H Sbjct: 562 RMWDIARGECVRVFMGHSGAINCLAVSP-DGRWLASAGEDSVVCLWDISTGRRIKAMRGH 620 Query: 227 FLSSQQLENIWWQRDGRLLVSCHSDGSYCQWPV----SSEAQQPEPLRSLVPYG 276 SS + ++ + R+G +LVS +D S W V +S + QPEP+ + G Sbjct: 621 GRSS--IYSLAFSREGTVLVSTGADNSVRVWDVKKNTNSPSAQPEPINDVTAQG 672 >6BX3-B nrPDB Length = 412 Score = 36.1 bits (82), Expect = 0.078, Method: Composition-based stats. Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 40/211 (18%) Query: 173 AVLQRLPEEARHRRVFEM-VEALQEHPRDPNQILIGYSRGLVVIWDLQGSR---VLYHFL 228 AVL+ PE+ H + E LQ P + + +G + G +VI+D+ R V + L Sbjct: 9 AVLKEHPEKLTHTIENPLRTECLQFSPCG-DYLALGCANGALVIYDMDTFRPICVPGNML 67 Query: 229 SS--QQLENIWWQRDGRLLVSCHSDGSYCQWPVSSEAQQPEPLRSLVPYGPFPCKAITRI 286 + + + +I W DGRLL++ D S W +S ++ + +R P + C+ Sbjct: 68 GAHVRPITSIAWSPDGRLLLTSSRDWSIKLWDLSKPSKPLKEIRFDSPI--WGCQ----- 120 Query: 287 LWLTTRQGLPFTIFQGGMPRASYGDRHCISVI-HDGQQTAFDFTSRVIGFTVLTEADP-- 343 WL ++ R C++ I + DF++ + ++L+++D Sbjct: 121 -WLDAKR------------------RLCVATIFEESDAYVIDFSNDPVA-SLLSKSDEKQ 160 Query: 344 -AATFDDPYALV--VLAEEELVVIDLQTAGW 371 ++T D Y LV V + ++I + GW Sbjct: 161 LSSTPDHGYVLVCTVHTKHPNIIIVGTSKGW 191 Score = 30.0 bits (66), Expect = 6.0, Method: Composition-based stats. Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 13/95 (13%) Query: 16 LKRDLFQFNKTVEHGFPHQPSALGYSPSLRILAIGTRSGAIKLYG--------APGVEFM 67 LK + T+E+ P + L +SP LA+G +GA+ +Y PG + Sbjct: 11 LKEHPEKLTHTIEN--PLRTECLQFSPCGDYLALGCANGALVIYDMDTFRPICVPG-NML 67 Query: 68 GLHQENNAVTQIHLLPGQCQLVTLLDDNSLHLWSL 102 G H +T I P L+T D S+ LW L Sbjct: 68 GAHVR--PITSIAWSPDGRLLLTSSRDWSIKLWDL 100 >5OV3-A nrPDB Length = 381 Score = 36.1 bits (82), Expect = 0.082, Method: Composition-based stats. Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 9/81 (11%) Query: 204 ILIGYSRGLVVIWDLQGSRVLYHFLSSQ--QLENIWWQRDGRLLVSCHSDGSYCQWPV-S 260 + +G + G +VIWD +R + +S+ + ++ W RDG LVS +D QW V S Sbjct: 40 LAVGCNDGRIVIWDFL-TRGIAKIISAHIHPVCSLCWSRDGHKLVSASTDNIVSQWDVLS 98 Query: 261 SEAQQ----PEPLRSLVPYGP 277 + Q P P+ V Y P Sbjct: 99 GDCDQRFRFPSPILK-VQYHP 118 >5MWJ-A nrPDB Length = 337 Score = 36.1 bits (82), Expect = 0.085, Method: Composition-based stats. Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 2/98 (2%) Query: 19 DLFQFNKTVEHGFPHQPSALGYSPSLRILAIGTRSGAIKLYGAPGVEFMGLHQENNAVTQ 78 DL + + +H F Q +LGY P+ LA+G S +++ + LH + V Sbjct: 211 DLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLS 270 Query: 79 IHLLPGQCQLVTLLDDNSLHLWSLKVKGGASELQEDES 116 + V+ DN L+ W + GAS Q ES Sbjct: 271 LKFAYCGKWFVSTGKDNLLNAW--RTPYGASIFQSKES 306 >5NNZ-B nrPDB Length = 415 Score = 35.4 bits (80), Expect = 0.14, Method: Composition-based stats. Identities = 16/29 (55%), Positives = 20/29 (68%), Gaps = 1/29 (3%) Query: 433 PQRDLLLTGHEDGTVRFWDA-SGVCLRLL 460 PQ + LLTG D T R WDA +G CL++L Sbjct: 355 PQGNHLLTGSSDKTARIWDAQTGQCLQVL 383 >4QHP-A nrPDB Length = 870 Score = 34.6 bits (78), Expect = 0.23, Method: Composition-based stats. Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 2/76 (2%) Query: 91 LLDDNSLHLWSLKVKGGASE-LQEDESFTLRGPPGAAPSATQITVVLPHSSCELLYLGTE 149 L+ D S L S+K+ G A++ + E E+ T+ G P + T +LP + L+ L Sbjct: 52 LVLDGSAKLLSVKINGAAADYVLEGETLTIAGVPSERFTVEVETEILPAENKSLMGLYAS 111 Query: 150 SGNVFVVQLP-AFRAL 164 GN+F P FR + Sbjct: 112 GGNLFTQCEPEGFRKI 127 >5WLC-LN nrPDB Length = 776 Score = 34.2 bits (77), Expect = 0.28, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%) Query: 433 PQRDLLLTGHEDGTVRFWDASGVCLRLLYKL--STVRVFLTDTDPNENFSA 481 P+ D + +G G+++FWD L +K + V TDTD N FSA Sbjct: 248 PRTDQIASGDSTGSIKFWDFQFATLNQSFKAHDADVLCLTTDTDNNYVFSA 298 >5FVM-C nrPDB Length = 303 Score = 33.4 bits (75), Expect = 0.49, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 51/124 (41%), Gaps = 13/124 (10%) Query: 36 SALGYSPSLRILAIGTRSGAIKLYGAPGVEFMGLHQENNAVTQIHLLPGQCQLVTLLDDN 95 +++ + R + + G IK++ ++ N V ++ + P Q +L++ D Sbjct: 79 TSIAFQQENRWMVSSSEDGTIKVWDVRSPSVQRNYKHNAPVNEVAIHPNQGELISCDQDG 138 Query: 96 SLHLWSLKVKGGASELQEDESFTLRGPPGAAPSATQITVVLPHSSCELLYLGTESGNVFV 155 ++ +W L ++L +++ L+ A S +L G GN +V Sbjct: 139 NIRIWDLGENQCTNQLTPEDNTPLQSLSVA-------------SDGSMLVAGNNKGNCYV 185 Query: 156 VQLP 159 ++P Sbjct: 186 WRMP 189 >6F3T-A nrPDB Length = 608 Score = 33.0 bits (74), Expect = 0.60, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 27/69 (39%), Gaps = 10/69 (14%) Query: 433 PQRDLLLTGHEDGTVRFWDASGVCLRLLYKLSTVRVFLTDTDPNENFSAQG--------- 483 P R+ LL+ EDGTVR W + YK V+ T P + G Sbjct: 361 PDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLW 420 Query: 484 -EDEWPPLR 491 D + PLR Sbjct: 421 ATDHYQPLR 429 >2ZUK-A nrPDB Length = 439 Score = 33.0 bits (74), Expect = 0.60, Method: Composition-based stats. Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 10/77 (12%) Query: 753 ERRMDEPVRAEQAKEIQLMHRAPVVGILV----LDGHSVPLPEPLEVAH-DLSKSPDM-- 805 +R+ EP RAE AK L++RA +G++V ++G+ + PL + D+ K+ D+ Sbjct: 363 DRQSREPARAETAK---LIYRAYQLGLVVYYVGMNGNVLEFTPPLTITETDIHKALDLLD 419 Query: 806 QGSHQLLVVSEEQFKVF 822 + +L VS E+ F Sbjct: 420 RAFSELSAVSNEEIAQF 436 >5A9Q-0 nrPDB Length = 380 Score = 33.0 bits (74), Expect = 0.63, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 35/84 (41%), Gaps = 7/84 (8%) Query: 191 VEALQEHPRDPNQILIGYSRGLVVIWDLQGSRVLYHFLSSQQLENIWWQ-----RDGRLL 245 + + HP + + G G++ IWD++ + L + + E W+ + L Sbjct: 220 LHCVDRHPNQQHVVATGGQDGMLSIWDVRQGTMPVSLLKAHEAE--MWEVHFHPSNPEHL 277 Query: 246 VSCHSDGSYCQWPVSSEAQQPEPL 269 +C DGS W S++ + L Sbjct: 278 FTCSEDGSLWHWDASTDVPEKSSL 301 >1XG7-A nrPDB Length = 250 Score = 33.0 bits (74), Expect = 0.68, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 1/58 (1%) Query: 373 PVQLPYLASLHCSAITCSHHVSNIPLKLWERIIAAGSRQNAHFSTMEWPIDGGTSLTP 430 P+++P L ++T S P K W +I H ++ WP+ G LTP Sbjct: 176 PMEIPIPEDLRIKSVT-SKLTQEKPTKFWMKIGQESGVPPLHIDSLIWPLLGNADLTP 232 >6MZM-G nrPDB Length = 800 Score = 33.0 bits (74), Expect = 0.75, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 27/69 (39%), Gaps = 10/69 (14%) Query: 433 PQRDLLLTGHEDGTVRFWDASGVCLRLLYKLSTVRVFLTDTDPNENFSAQG--------- 483 P R+ LL+ EDGTVR W + YK V+ T P + G Sbjct: 553 PDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLW 612 Query: 484 -EDEWPPLR 491 D + PLR Sbjct: 613 ATDHYQPLR 621 >5WYK-BB nrPDB Length = 943 Score = 32.3 bits (72), Expect = 1.1, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 2/70 (2%) Query: 194 LQEHPRDPNQILIGYSRGLVVIWDLQGSRVLYHFLSSQ-QLENIWWQRDGRLLVSCHSDG 252 L+ H +D + + +GY+ G++ +WDL VL +F + + + + G L+S D Sbjct: 85 LEAH-KDTDLLAVGYADGVIKVWDLMSKTVLLNFNGHKAAITLLQFDGTGTRLISGSKDS 143 Query: 253 SYCQWPVSSE 262 + W + E Sbjct: 144 NIIVWDLVGE 153 Score = 31.1 bits (69), Expect = 2.6, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 70/183 (38%), Gaps = 31/183 (16%) Query: 83 PGQCQLVTLLDDNSLHLWSLKVKGGASELQEDESFTLRGPPGAAPS----ATQITVVLPH 138 PGQ + + L+D +++W +K S+L + PPGA+ + + T + H Sbjct: 38 PGQL-ITSALED--VNIWDIKTGDLVSKLSDGL------PPGASDARGAKPAECTYLEAH 88 Query: 139 SSCELLYLGTESGNVFVVQLPAFRALEDRTISSDAVLQRLPEEARHRRVFEMVEALQEHP 198 +LL +G G + V L + L + A+ L + Sbjct: 89 KDTDLLAVGYADGVIKVWDLMSKTVLLNFNGHKAAI------------------TLLQFD 130 Query: 199 RDPNQILIGYSRGLVVIWDLQGSRVLYHFLSSQQLENIWWQRDGRLLVSCHSDGSYCQWP 258 +++ G +++WDL G LY S + +W + L+S DG W Sbjct: 131 GTGTRLISGSKDSNIIVWDLVGEVGLYKLRSHKDSITGFWCQGEDWLISTSKDGMIKLWD 190 Query: 259 VSS 261 + + Sbjct: 191 LKT 193 >4BTS-AE nrPDB Length = 296 Score = 32.3 bits (72), Expect = 1.3, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 32/63 (50%) Query: 750 PPAERRMDEPVRAEQAKEIQLMHRAPVVGILVLDGHSVPLPEPLEVAHDLSKSPDMQGSH 809 P +RR D+ Q K +L+ + + + +S+P+ EP + H K+ D+Q H Sbjct: 16 PRGDRRGDKNDWQPQTKLGRLVKYGKISSLDEIFKYSIPIKEPEIIDHFYPKNKDVQAEH 75 Query: 810 QLL 812 +L+ Sbjct: 76 KLM 78 >5JFC-L nrPDB Length = 474 Score = 31.9 bits (71), Expect = 1.6, Method: Composition-based stats. Identities = 13/34 (38%), Positives = 22/34 (64%) Query: 49 IGTRSGAIKLYGAPGVEFMGLHQENNAVTQIHLL 82 IGT +G ++Y PGV G++ N +T+I+L+ Sbjct: 245 IGTGAGTPRIYPWPGVNLNGIYSANEFLTRINLM 278 >5M25-A nrPDB Length = 434 Score = 31.9 bits (71), Expect = 1.6, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%) Query: 433 PQRDLLLTGHEDGTVRFWDA-SGVCLRLL 460 PQ +L+++G D +VR WD +G CL+ L Sbjct: 239 PQSNLIVSGSFDESVRIWDVKTGKCLKTL 267 >2H9P-A nrPDB Length = 329 Score = 31.9 bits (71), Expect = 1.6, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%) Query: 433 PQRDLLLTGHEDGTVRFWDA-SGVCLRLL 460 PQ +L+++G D +VR WD +G CL+ L Sbjct: 134 PQSNLIVSGSFDESVRIWDVKTGKCLKTL 162 >6QX9-4B nrPDB Length = 522 Score = 31.5 bits (70), Expect = 2.0, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 9/72 (12%) Query: 40 YSPSLRILAIGTRSGAIKLYGAPGVEFMGL---HQENNAVTQIH------LLPGQCQLVT 90 +SP+ ++LA SG KL+ P + H N H L P L + Sbjct: 239 FSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDPKDVNLAS 298 Query: 91 LLDDNSLHLWSL 102 D S+ LWSL Sbjct: 299 CAADGSVKLWSL 310 >6ELZ-p nrPDB Length = 460 Score = 31.5 bits (70), Expect = 2.2, Method: Composition-based stats. Identities = 33/134 (24%), Positives = 55/134 (41%), Gaps = 24/134 (17%) Query: 322 QQTAFDFTSRVIGFTVLTEADPAATFDDPYALVVLAEEELVVIDLQTAGWPPVQLPYLAS 381 +Q FD T +G++V ++ T+D +V A ID +T + + + L++ Sbjct: 291 EQVIFDSTDNTVGYSV-SQDHTIKTWD-----LVTAR----CIDTRTTSYSLLSIAQLST 340 Query: 382 LHCSAITCSHHVSNIPLKLWERIIAAGSRQNAHFSTMEWPIDGG----TSLTPAPPQRDL 437 L+ A C +I L R A + + G +SL P + Sbjct: 341 LNLLA--CGSSARHITLH--------DPRVGASSKVTQQQLIGHKNFVSSLDTCPENEYI 390 Query: 438 LLTGHEDGTVRFWD 451 L +G DGTV+ WD Sbjct: 391 LCSGSHDGTVKVWD 404 >6ID0-T nrPDB Length = 514 Score = 30.7 bits (68), Expect = 2.9, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 35/85 (41%), Gaps = 3/85 (3%) Query: 21 FQFNKTVEHGFPHQPSALGYS--PSLRILAIGTRSGAIKLYGA-PGVEFMGLHQENNAVT 77 ++NK + H H + G P++ +L +R +++ L NAV Sbjct: 275 LEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVA 334 Query: 78 QIHLLPGQCQLVTLLDDNSLHLWSL 102 + + Q++T D ++ LW L Sbjct: 335 TVRCQAAEPQIITGSHDTTIRLWDL 359 >3C0Q-A nrPDB Length = 301 Score = 30.7 bits (68), Expect = 3.3, Method: Composition-based stats. Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 6/81 (7%) Query: 601 RLVAFGTSHGFGLFDHQQRRQVFVKCTLHPSD-QLALEGPLSRVKSLKKSLRQSFRRMRR 659 R++ F HGF LF Q F L P D + A E L+R+ +L ++ Q R Sbjct: 65 RILRFNADHGFALFRIGQHLIPFASHPLFPYDWEGAYEEELARLGALARAFGQ-----RL 119 Query: 660 SRVSSRKRHPAGPPGEAQEGS 680 S + +P P E E S Sbjct: 120 SMHPGQYVNPGSPDPEVVERS 140 >5VJ7-A nrPDB Length = 476 Score = 30.3 bits (67), Expect = 4.0, Method: Composition-based stats. Identities = 13/34 (38%), Positives = 21/34 (61%) Query: 49 IGTRSGAIKLYGAPGVEFMGLHQENNAVTQIHLL 82 IGT +G KL PG+ G++ N +T+I+L+ Sbjct: 245 IGTGAGTPKLPNIPGINLNGIYSANEFLTRINLM 278 >4YRY-B nrPDB Length = 468 Score = 30.3 bits (67), Expect = 4.3, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 20/34 (58%) Query: 49 IGTRSGAIKLYGAPGVEFMGLHQENNAVTQIHLL 82 IGT +G K G PG G++ N +T+++L+ Sbjct: 231 IGTGAGTPKFMGIPGTNLNGVYSANEFLTRVNLM 264 >3JZG-A nrPDB Length = 402 Score = 30.3 bits (67), Expect = 4.8, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 4/76 (5%) Query: 191 VEALQEHPRDPNQILIGYSRGLVVIWDLQGSRVLYHF--LSSQQLENIWWQRD--GRLLV 246 + L+ HPRDPN +L + +W++Q ++ F + + E + D G ++ Sbjct: 154 INELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIM 213 Query: 247 SCHSDGSYCQWPVSSE 262 SC D S W ++S+ Sbjct: 214 SCGMDHSLKLWRINSK 229 >6EMK-B nrPDB Length = 303 Score = 29.6 bits (65), Expect = 6.8, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 49/124 (39%), Gaps = 13/124 (10%) Query: 36 SALGYSPSLRILAIGTRSGAIKLYGAPGVEFMGLHQENNAVTQIHLLPGQCQLVTLLDDN 95 +++ + R + + G IK++ ++ N V ++ + P Q +L++ D Sbjct: 79 TSVSFQQDNRWMVTSSEDGTIKVWDVRSPSIPRNYKHNAPVNEVVIHPNQGELISCDRDG 138 Query: 96 SLHLWSLKVKGGASELQEDESFTLRGPPGAAPSATQITVVLPHSSCELLYLGTESGNVFV 155 ++ +W L +L ++ +L+ A S +L GN +V Sbjct: 139 NIRIWDLGENQCTHQLTPEDDTSLQSLSMA-------------SDGSMLAAANTKGNCYV 185 Query: 156 VQLP 159 ++P Sbjct: 186 WEMP 189 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.311 0.141 0.450 Lambda K H 0.267 0.0416 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 42,934,623 Number of Sequences: 36641 Number of extensions: 1821595 Number of successful extensions: 4095 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 24 Number of HSP's successfully gapped in prelim test: 48 Number of HSP's that attempted gapping in prelim test: 3941 Number of HSP's gapped (non-prelim): 214 length of query: 1020 length of database: 10,336,785 effective HSP length: 107 effective length of query: 913 effective length of database: 6,416,198 effective search space: 5857988774 effective search space used: 5857988774 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 64 (29.2 bits)