BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= Q6IQ20
         (393 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

4QN9-A nrPDB                                                          820   0.0  
4JO0-A nrPDB                                                           55   5e-08
2WYM-A nrPDB                                                           36   0.027
5TX7-A nrPDB                                                           31   0.79 
5DWV-A nrPDB                                                           30   1.6  
5NOF-A nrPDB                                                           30   2.0  
2WFO-A nrPDB                                                           29   2.9  
5LJ5-W nrPDB                                                           28   6.0  
4P8H-A nrPDB                                                           28   6.2  
3UW3-A nrPDB                                                           28   8.8  
4AXV-A nrPDB                                                           28   9.1  
4KA0-A nrPDB                                                           28   9.5  
1T4B-A nrPDB                                                           28   9.5  

>4QN9-A nrPDB
          Length = 393

 Score =  820 bits (2119), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/393 (100%), Positives = 393/393 (100%)

Query: 1   MDENESNQSLMTSSQYPKEAVRKRQNSARNSGASDSSRFSRKSFKLDYRLEEDVTKSKKG 60
           MDENESNQSLMTSSQYPKEAVRKRQNSARNSGASDSSRFSRKSFKLDYRLEEDVTKSKKG
Sbjct: 1   MDENESNQSLMTSSQYPKEAVRKRQNSARNSGASDSSRFSRKSFKLDYRLEEDVTKSKKG 60

Query: 61  KDGRFVNPWPTWKNPSIPNVLRWLIMEKDHSSVPSSKEELDKELPVLKPYFITNPEEAGV 120
           KDGRFVNPWPTWKNPSIPNVLRWLIMEKDHSSVPSSKEELDKELPVLKPYFITNPEEAGV
Sbjct: 61  KDGRFVNPWPTWKNPSIPNVLRWLIMEKDHSSVPSSKEELDKELPVLKPYFITNPEEAGV 120

Query: 121 REAGLRVTWLGHATVMVEMDELIFLTDPIFSSRASPSQYMGPKRFRRSPCTISELPPIDA 180
           REAGLRVTWLGHATVMVEMDELIFLTDPIFSSRASPSQYMGPKRFRRSPCTISELPPIDA
Sbjct: 121 REAGLRVTWLGHATVMVEMDELIFLTDPIFSSRASPSQYMGPKRFRRSPCTISELPPIDA 180

Query: 181 VLISHNHYDHLDYNSVIALNERFGNELRWFVPLGLLDWMQKCGCENVIELDWWEENCVPG 240
           VLISHNHYDHLDYNSVIALNERFGNELRWFVPLGLLDWMQKCGCENVIELDWWEENCVPG
Sbjct: 181 VLISHNHYDHLDYNSVIALNERFGNELRWFVPLGLLDWMQKCGCENVIELDWWEENCVPG 240

Query: 241 HDKVTFVFTPSQHWCKRTLMDDNKVLWGSWSVLGPWNRFFFAGDTGYCPAFEEIGKRFGP 300
           HDKVTFVFTPSQHWCKRTLMDDNKVLWGSWSVLGPWNRFFFAGDTGYCPAFEEIGKRFGP
Sbjct: 241 HDKVTFVFTPSQHWCKRTLMDDNKVLWGSWSVLGPWNRFFFAGDTGYCPAFEEIGKRFGP 300

Query: 301 FDLAAIPIGAYEPRWFMKYQHVDPEEAVRIHTDVQTKKSMAIHWGTFALANEHYLEPPVK 360
           FDLAAIPIGAYEPRWFMKYQHVDPEEAVRIHTDVQTKKSMAIHWGTFALANEHYLEPPVK
Sbjct: 301 FDLAAIPIGAYEPRWFMKYQHVDPEEAVRIHTDVQTKKSMAIHWGTFALANEHYLEPPVK 360

Query: 361 LNEALERYGLNAEDFFVLKHGESRYLNNDDENF 393
           LNEALERYGLNAEDFFVLKHGESRYLNNDDENF
Sbjct: 361 LNEALERYGLNAEDFFVLKHGESRYLNNDDENF 393


>4JO0-A nrPDB
          Length = 534

 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 76/186 (40%), Gaps = 21/186 (11%)

Query: 129 WLGHATVMVEMDELIFLTDPIFSSRASPSQYMGPKRFRRSPCTISELPP-IDAVLISHNH 187
           ++GHA V        FL DP+ S    P       RF     T ++LP  ID +LI+HNH
Sbjct: 257 YVGHACVFARHRGTTFLVDPVLSYSGYPGG--AENRF-----TFADLPERIDHLLITHNH 309

Query: 188 YDHLDYNSVIALNERFGNEL------RWFVPLGLLDWMQKCGCENVIELDWWEENCVPGH 241
            DH+ + +++ +  R G  L         V  GL   +++ G  +V+E+D  E       
Sbjct: 310 QDHMLFETLLRIRHRVGRVLVPKSTNASLVDPGLGGILRRLGFTDVVEVDDLETLSCGSA 369

Query: 242 DKVTFVFTPSQHWCKRTLMDDNKVLWGSWSVLGPWNRFFFAGDTGYCPA-FEEIGKRFGP 300
           + V   F       +        + +G  SVL      F A  T   P  + ++ +  GP
Sbjct: 370 EVVALPFLGEHGDLRIRSKTGWLIRFGERSVL------FAADSTNISPTMYTKVAEVIGP 423

Query: 301 FDLAAI 306
            D   I
Sbjct: 424 VDTVFI 429


>2WYM-A nrPDB
          Length = 360

 Score = 36.2 bits (82), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 30/131 (22%), Positives = 59/131 (45%), Gaps = 16/131 (12%)

Query: 178 IDAVLISHNHYDHLDYNSVIALNERFGNELRWFVPLGLLD-WM------QKCGC---ENV 227
           IDAVL +H+H DH+D N   A+ +   +++ +  P   +D W+      ++C      +V
Sbjct: 110 IDAVLATHDHNDHIDVNVAAAVMQNCADDVPFIGPKTCVDLWIGWGVPKERCIVVKPGDV 169

Query: 228 IELDWWEENCVPGHDKVTFVFTPSQHWCKRTL---MDDNKVLWGSWSVLGPWNRFFFAGD 284
           +++   E + +   D+   +  P+       L   MDD  V   ++    P    + +GD
Sbjct: 170 VKVKDIEIHALDAFDRTALITLPADQKAAGVLPDGMDDRAV---NYLFKTPGGSLYHSGD 226

Query: 285 TGYCPAFEEIG 295
           + Y   + + G
Sbjct: 227 SHYSNYYAKHG 237


>5TX7-A nrPDB
          Length = 327

 Score = 31.2 bits (69), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 14/103 (13%)

Query: 238 VPGH--DKVT-FVFTPSQHWCKRTLMDDNKVLWGSWSVLGPW-----NRFFFAGDTGYCP 289
           VPG+  D V   VF      C+RT + D+++  G+W+    W      +    G T    
Sbjct: 95  VPGYGTDSVAQHVFALLLELCRRTALHDHRIRAGAWTQSPDWCFWDSTQEELTGKTMGIV 154

Query: 290 AFEEIGKRFGPFDLA-AIPIGAYEPRW-----FMKYQHVDPEE 326
            F   G+R G    A  + + AY PR      +  ++HV  +E
Sbjct: 155 GFGNTGRRVGRIANALGMNVIAYAPRSRFDPDYRPFEHVGLDE 197


>5DWV-A nrPDB
          Length = 573

 Score = 30.0 bits (66), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 9/53 (16%)

Query: 335 QTKKSMAIHWGTFALANEH---------YLEPPVKLNEALERYGLNAEDFFVL 378
           +  K  A+  GT A  + H         Y E  V+L EA++RYGLN     V+
Sbjct: 51  KAMKRYALVPGTIAFTDAHIEVNITYAEYFEMSVRLAEAMKRYGLNTNHRIVV 103


>5NOF-A nrPDB
          Length = 325

 Score = 30.0 bits (66), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 35/171 (20%), Positives = 55/171 (32%), Gaps = 34/171 (19%)

Query: 214 GLLDWMQKCGCENVIELDWWEENCVPGHDK-------VTFVFTPSQHWCKRTLMDDNKVL 266
           G +    K G  NV+E         P   +        TF+F P+ H   R +M   K L
Sbjct: 103 GNVSITSKSGSANVLEALGLNIRVSPERAREMVESTNFTFIFAPAYHPALRPIMPVRKAL 162

Query: 267 WGSWSVLGPWNRFFFAGDTGYCPAFEEIGKRFGPFDLAAIPIGAYEPRWFMKYQHVDPEE 326
                              G    F  IG    P D A   +G   P           E 
Sbjct: 163 -------------------GIKTVFNVIGPLANPADPAYQVVGVNSPELL--------EP 195

Query: 327 AVRIHTDVQTKKSMAIHWGTFALANEHYLEPPVKLNEALERYGLNAEDFFV 377
                  +  ++++ +H       + H     +++   +ERY L+ EDF +
Sbjct: 196 VAEALEFLGVERALVVHGSGMDEVSPHRETLVLEVGNGVERYTLSPEDFGI 246


>2WFO-A nrPDB
          Length = 182

 Score = 29.3 bits (64), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 1/50 (2%)

Query: 335 QTKKSMAIHWGTFALANEHYLEPPVKLNEALERYGLNAEDFFVLKHGESR 384
           ++  S AIHW + AL ++  ++PP+      ++ G N + F + K  ESR
Sbjct: 52  KSDSSWAIHWFSIALGHDWLMDPPMLCRNKTKKEGSNIQ-FNISKADESR 100


>5LJ5-W nrPDB
          Length = 238

 Score = 28.5 bits (62), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 21/136 (15%)

Query: 80  VLRWLIMEKDHSSVPSSKEELDKELPVLKPYFITNPEEAGV----REAGLRVTWLGHATV 135
           +LR L +E D  S+PSS + L K   +L    +TN +   +    R   +    LG   +
Sbjct: 30  ILRDLQLETDSESMPSSLKHLTKPTHILD---LTNNDLIMIPDLSRRDDIHTLLLGRNNI 86

Query: 136 MVEMDELIFLTDP--IFSSRASPSQYMGPKRFRRSPCTISELPPI-----------DAVL 182
            VE+D  +   +   +  S  S  ++   +R RR+P T+  L  I           + VL
Sbjct: 87  -VEVDGRLLPMNVQNLTLSNNSIRRFEDLQRLRRAPRTLKNLTLIGNQVCHLANYREHVL 145

Query: 183 ISHNHYDHLDYNSVIA 198
               H + LD+ +V A
Sbjct: 146 RLVPHLETLDFQNVTA 161


>4P8H-A nrPDB
          Length = 481

 Score = 28.1 bits (61), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 16/57 (28%), Positives = 25/57 (43%)

Query: 272 VLGPWNRFFFAGDTGYCPAFEEIGKRFGPFDLAAIPIGAYEPRWFMKYQHVDPEEAV 328
             GP    ++     Y    + + + + P D+      AY P  F++YQ V P EAV
Sbjct: 308 TFGPIGELWYRKSGTYRGKVQNLTQFYHPLDMFGEWNRAYGPAGFLQYQFVIPTEAV 364


>3UW3-A nrPDB
          Length = 377

 Score = 27.7 bits (60), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 17/70 (24%), Positives = 29/70 (41%)

Query: 120 VREAGLRVTWLGHATVMVEMDELIFLTDPIFSSRASPSQYMGPKRFRRSPCTISELPPID 179
           +R AG    W+  A+ +   D+ + + DP+  +    +   G K F    CT+S +    
Sbjct: 88  LRAAGWNGYWIDAASSLRMKDDAVIILDPVNLNVIKDALVNGTKNFIGGNCTVSLMLMAL 147

Query: 180 AVLISHNHYD 189
             L   N  D
Sbjct: 148 GGLFRENLVD 157


>4AXV-A nrPDB
          Length = 243

 Score = 27.7 bits (60), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 12/24 (50%), Positives = 13/24 (54%)

Query: 166 RRSPCTISELPPIDAVLISHNHYD 189
           R+ PC   ELPPI A L    H D
Sbjct: 208 RQLPCITVELPPISADLTIEKHLD 231


>4KA0-A nrPDB
          Length = 168

 Score = 27.7 bits (60), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 12/81 (14%)

Query: 266 LWGSWSVLGPWNRFFFAGDTGYCPAFEEIGKRFGPFDLAAIPIGA-YEPRWFMKYQHVDP 324
           LW +W   GP  +          PAFE +GK++   D+  +P+      + +++Y     
Sbjct: 54  LWATWC--GPCIQ--------ESPAFEALGKKYVGKDIVFLPVSTDTTTKPWLRYLDGHK 103

Query: 325 EEAVRIHT-DVQTKKSMAIHW 344
           +E  + H+ DV  K+S AI +
Sbjct: 104 KELTQYHSNDVALKESWAIMY 124


>1T4B-A nrPDB
          Length = 367

 Score = 27.7 bits (60), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 14/54 (25%), Positives = 26/54 (48%)

Query: 120 VREAGLRVTWLGHATVMVEMDELIFLTDPIFSSRASPSQYMGPKRFRRSPCTIS 173
           +RE+G +  W+  A+ +   D+ I + DP+     +     G + F    CT+S
Sbjct: 85  LRESGWQGYWIDAASSLRMKDDAIIILDPVNQDVITDGLNNGIRTFVGGNCTVS 138


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

4QN9-A nrPDB                                                          791   0.0  
4JO0-A nrPDB                                                          252   1e-67

Sequences not found previously or not previously below threshold:

2WYM-A nrPDB                                                           41   7e-04
3RSZ-A nrPDB                                                           33   0.25 
2WFO-A nrPDB                                                           32   0.33 
5G2V-A nrPDB                                                           31   0.96 
5DWV-A nrPDB                                                           30   1.3  
5H8W-A nrPDB                                                           30   1.4  
4P8H-A nrPDB                                                           30   1.9  
4KA0-A nrPDB                                                           30   2.2  
6GII-A nrPDB                                                           30   2.4  
5W1M-Q nrPDB                                                           28   4.7  
2FXV-A nrPDB                                                           28   6.0  
3ITA-A nrPDB                                                           28   6.8  
4KXA-A nrPDB                                                           28   9.0  

>4QN9-A nrPDB
          Length = 393

 Score =  791 bits (2042), Expect = 0.0,   Method: Composition-based stats.
 Identities = 393/393 (100%), Positives = 393/393 (100%)

Query: 1   MDENESNQSLMTSSQYPKEAVRKRQNSARNSGASDSSRFSRKSFKLDYRLEEDVTKSKKG 60
           MDENESNQSLMTSSQYPKEAVRKRQNSARNSGASDSSRFSRKSFKLDYRLEEDVTKSKKG
Sbjct: 1   MDENESNQSLMTSSQYPKEAVRKRQNSARNSGASDSSRFSRKSFKLDYRLEEDVTKSKKG 60

Query: 61  KDGRFVNPWPTWKNPSIPNVLRWLIMEKDHSSVPSSKEELDKELPVLKPYFITNPEEAGV 120
           KDGRFVNPWPTWKNPSIPNVLRWLIMEKDHSSVPSSKEELDKELPVLKPYFITNPEEAGV
Sbjct: 61  KDGRFVNPWPTWKNPSIPNVLRWLIMEKDHSSVPSSKEELDKELPVLKPYFITNPEEAGV 120

Query: 121 REAGLRVTWLGHATVMVEMDELIFLTDPIFSSRASPSQYMGPKRFRRSPCTISELPPIDA 180
           REAGLRVTWLGHATVMVEMDELIFLTDPIFSSRASPSQYMGPKRFRRSPCTISELPPIDA
Sbjct: 121 REAGLRVTWLGHATVMVEMDELIFLTDPIFSSRASPSQYMGPKRFRRSPCTISELPPIDA 180

Query: 181 VLISHNHYDHLDYNSVIALNERFGNELRWFVPLGLLDWMQKCGCENVIELDWWEENCVPG 240
           VLISHNHYDHLDYNSVIALNERFGNELRWFVPLGLLDWMQKCGCENVIELDWWEENCVPG
Sbjct: 181 VLISHNHYDHLDYNSVIALNERFGNELRWFVPLGLLDWMQKCGCENVIELDWWEENCVPG 240

Query: 241 HDKVTFVFTPSQHWCKRTLMDDNKVLWGSWSVLGPWNRFFFAGDTGYCPAFEEIGKRFGP 300
           HDKVTFVFTPSQHWCKRTLMDDNKVLWGSWSVLGPWNRFFFAGDTGYCPAFEEIGKRFGP
Sbjct: 241 HDKVTFVFTPSQHWCKRTLMDDNKVLWGSWSVLGPWNRFFFAGDTGYCPAFEEIGKRFGP 300

Query: 301 FDLAAIPIGAYEPRWFMKYQHVDPEEAVRIHTDVQTKKSMAIHWGTFALANEHYLEPPVK 360
           FDLAAIPIGAYEPRWFMKYQHVDPEEAVRIHTDVQTKKSMAIHWGTFALANEHYLEPPVK
Sbjct: 301 FDLAAIPIGAYEPRWFMKYQHVDPEEAVRIHTDVQTKKSMAIHWGTFALANEHYLEPPVK 360

Query: 361 LNEALERYGLNAEDFFVLKHGESRYLNNDDENF 393
           LNEALERYGLNAEDFFVLKHGESRYLNNDDENF
Sbjct: 361 LNEALERYGLNAEDFFVLKHGESRYLNNDDENF 393


>4JO0-A nrPDB
          Length = 534

 Score =  252 bits (644), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 63/242 (26%), Positives = 96/242 (39%), Gaps = 34/242 (14%)

Query: 129 WLGHATVMVEMDELIFLTDPIFSSRASPSQYMGPKRFRRSPCTISELPP-IDAVLISHNH 187
           ++GHA V        FL DP+ S    P       RF     T ++LP  ID +LI+HNH
Sbjct: 257 YVGHACVFARHRGTTFLVDPVLSYSGYPGG--AENRF-----TFADLPERIDHLLITHNH 309

Query: 188 YDHLDYNSVIALNERFGNEL------RWFVPLGLLDWMQKCGCENVIELDWWEENCVPGH 241
            DH+ + +++ +  R G  L         V  GL   +++ G  +V+E+D  E       
Sbjct: 310 QDHMLFETLLRIRHRVGRVLVPKSTNASLVDPGLGGILRRLGFTDVVEVDDLETLSCGSA 369

Query: 242 DKVTFVFTPSQHWCKRTLMDDNKVLWGSWSVLGPWNRFFFAGDTGYCPA-FEEIGKRFGP 300
           + V   F       +        + +G  SVL      F A  T   P  + ++ +  GP
Sbjct: 370 EVVALPFLGEHGDLRIRSKTGWLIRFGERSVL------FAADSTNISPTMYTKVAEVIGP 423

Query: 301 FDLAAI---PIGAYEPRWFMKYQHVDPEEAVRIHTDVQTKKSMAIHWGTFALANE--HYL 355
            D   I    IGA    W     + +P        D +T +S  ++   F  A E    L
Sbjct: 424 VDTVFIGMESIGA-AASWIYGPLYGEP-------LDRRTDQSRRLNGSNFPQAREIVDAL 475

Query: 356 EP 357
           EP
Sbjct: 476 EP 477


>2WYM-A nrPDB
          Length = 360

 Score = 41.2 bits (95), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 54/129 (41%), Gaps = 10/129 (7%)

Query: 177 PIDAVLISHNHYDHLDYNSVIALNERFGNEL-----RWFVPLGLLDWMQKCGCE-----N 226
            IDAVL +H+H DH+D N   A+ +   +++     +  V L +   + K  C      +
Sbjct: 109 QIDAVLATHDHNDHIDVNVAAAVMQNCADDVPFIGPKTCVDLWIGWGVPKERCIVVKPGD 168

Query: 227 VIELDWWEENCVPGHDKVTFVFTPSQHWCKRTLMDDNKVLWGSWSVLGPWNRFFFAGDTG 286
           V+++   E + +   D+   +  P+       L D       ++    P    + +GD+ 
Sbjct: 169 VVKVKDIEIHALDAFDRTALITLPADQKAAGVLPDGMDDRAVNYLFKTPGGSLYHSGDSH 228

Query: 287 YCPAFEEIG 295
           Y   + + G
Sbjct: 229 YSNYYAKHG 237


>3RSZ-A nrPDB
          Length = 725

 Score = 32.7 bits (73), Expect = 0.25,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 64/171 (37%), Gaps = 27/171 (15%)

Query: 183 ISHNHYDHLDYNSVIALNERFG---NELRWFVPLG---------LLDWMQKCGCENVIEL 230
           +S +  +HL + +   +  R G   + L+   P+          L+  + K   +N +++
Sbjct: 21  MSRDLQNHLLFETATEVANRVGGIYSVLKSKAPITVAQYKDHYHLIGPLNKATYQNEVDI 80

Query: 231 DWWEENCVPGHDKVTFVFTPSQHWCKRTLMDDNKVLWGSWSVLGPWNRFFFAGDT--GYC 288
             W++      +       P QH  +         ++G W + G      F  D+  GY 
Sbjct: 81  LDWKKPEAFSDE-----MRPVQHALQTMESRGVHFVYGRWLIEGAPKVILFDLDSVRGYS 135

Query: 289 PAFE-EIGKRFG------PFDLAAIPIGAYEPRWFM-KYQHVDPEEAVRIH 331
             ++ ++    G       F+     +  Y   WF+ +  H+D + A+  H
Sbjct: 136 NEWKGDLWSLVGIPSPENDFETNDAILLGYTVAWFLGEVAHLDSQHAIVAH 186


>2WFO-A nrPDB
          Length = 182

 Score = 32.3 bits (72), Expect = 0.33,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 1/50 (2%)

Query: 335 QTKKSMAIHWGTFALANEHYLEPPVKLNEALERYGLNAEDFFVLKHGESR 384
           ++  S AIHW + AL ++  ++PP+      ++ G N + F + K  ESR
Sbjct: 52  KSDSSWAIHWFSIALGHDWLMDPPMLCRNKTKKEGSNIQ-FNISKADESR 100


>5G2V-A nrPDB
          Length = 534

 Score = 30.8 bits (68), Expect = 0.96,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 66/184 (35%), Gaps = 42/184 (22%)

Query: 182 LISHNHYDHL-DY-NSVIALNERFGNELRWFVPLGLLDWMQKCGCENVIELDWWEENCVP 239
           LIS  +  ++ DY  +V+A++E  G          LL++++K G     ELD      V 
Sbjct: 303 LISWKYQQYMRDYLATVLAVDENIGR---------LLNYLEKIG-----ELDN--TIIVY 346

Query: 240 GHDKVTFVFTPSQHWCKRTLMDDNKVLWGSWSVLGPWNRFFFAGDT--------GYCPAF 291
             D+    F     W  +  M +         ++  + +   AG T         + P F
Sbjct: 347 TSDQG--FFLGEHGWFDKRFMYEECQRM---PLIIRYPKAIKAGSTSSAISMNVDFAPTF 401

Query: 292 EEIGKRFGPFDLAAIPI-------GAYEPRW----FMKYQHVDPEEAVRIHTDVQTKKSM 340
            +      P D+    +       G     W    +  Y     E +V+ H  ++T+   
Sbjct: 402 LDFAGVEVPSDIQGASLKPVLENEGKTPADWRKAAYYHYYEYPAEHSVKRHYGIRTQDFK 461

Query: 341 AIHW 344
            IH+
Sbjct: 462 LIHF 465


>5DWV-A nrPDB
          Length = 573

 Score = 30.4 bits (67), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 9/50 (18%)

Query: 338 KSMAIHWGTFALANEH---------YLEPPVKLNEALERYGLNAEDFFVL 378
           K  A+  GT A  + H         Y E  V+L EA++RYGLN     V+
Sbjct: 54  KRYALVPGTIAFTDAHIEVNITYAEYFEMSVRLAEAMKRYGLNTNHRIVV 103


>5H8W-A nrPDB
          Length = 597

 Score = 30.4 bits (67), Expect = 1.4,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 50/104 (48%), Gaps = 11/104 (10%)

Query: 280 FFAGDTGYCPAFEEIGKRFGPFDLAAIPIGAYEPRWFMKYQHVDPEEAVRIHTDVQ---- 335
           F++  TG+   F++IG+ F P +       AY      KY  +D +E  R+ T ++    
Sbjct: 372 FYSDITGFEIPFKKIGEIFPPENRYI----AYYDGVSSKYDTLDEKELDRMATVIEDIIL 427

Query: 336 -TKKSMAIHWGTFALANEHYLEPPVKLNEALERYGLNAEDFFVL 378
             KK+  +++ +++L +   +E  V      E  G++ ++ + +
Sbjct: 428 KVKKNTIVYFPSYSLMDR--VENRVSFEHMKEYRGIDQKELYSM 469


>4P8H-A nrPDB
          Length = 481

 Score = 30.0 bits (66), Expect = 1.9,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 25/56 (44%)

Query: 273 LGPWNRFFFAGDTGYCPAFEEIGKRFGPFDLAAIPIGAYEPRWFMKYQHVDPEEAV 328
            GP    ++     Y    + + + + P D+      AY P  F++YQ V P EAV
Sbjct: 309 FGPIGELWYRKSGTYRGKVQNLTQFYHPLDMFGEWNRAYGPAGFLQYQFVIPTEAV 364


>4KA0-A nrPDB
          Length = 168

 Score = 29.7 bits (65), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 2/59 (3%)

Query: 288 CPAFEEIGKRFGPFDLAAIPIGA-YEPRWFMKYQHVDPEEAVRIHT-DVQTKKSMAIHW 344
            PAFE +GK++   D+  +P+      + +++Y     +E  + H+ DV  K+S AI +
Sbjct: 66  SPAFEALGKKYVGKDIVFLPVSTDTTTKPWLRYLDGHKKELTQYHSNDVALKESWAIMY 124


>6GII-A nrPDB
          Length = 479

 Score = 29.7 bits (65), Expect = 2.4,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 15/112 (13%)

Query: 284 DTGYCPAFEEIGKRFGPFDLAAIPIGAYEPRWFMKYQHV--DPEEAVRIHTDVQTKKSMA 341
             G CP    + + F PF  A +   A   RW  +   +   P+    + T   T K + 
Sbjct: 56  SVGGCPVH-RLAEDFDPFQDAYMADPAQFVRWAREQVPIFYAPKLNYWVVTRYDTIKQIF 114

Query: 342 IHWGTFALAN--EHYLEPPVKLNEALERYGLNAEDFFVLKHGESRYLNNDDE 391
               TF+ +N  + + +P  ++ + LERYG          +  +R L N+DE
Sbjct: 115 RDPVTFSPSNVLQSFAQPSAEVRQVLERYG----------YAFNRTLVNEDE 156


>5W1M-Q nrPDB
          Length = 152

 Score = 28.5 bits (62), Expect = 4.7,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 1/50 (2%)

Query: 335 QTKKSMAIHWGTFALANEHYLEPPVKLNEALERYGLNAEDFFVLKHGESR 384
           ++  S AIHW + AL ++  ++PP+      ++ G N + F + K  ++R
Sbjct: 52  KSDSSWAIHWFSNALGHDWLMDPPMLCRNKTKKEGSNIQ-FNISKADDAR 100


>2FXV-A nrPDB
          Length = 194

 Score = 28.5 bits (62), Expect = 6.0,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 27/72 (37%), Gaps = 3/72 (4%)

Query: 112 ITNPEEAGVREAGLRVTWLGHATVMVEMDELIFLTDPIFSSRASPSQYMGPKRFRRSPCT 171
           I   E +G+  A +    LG   V     + + LTD + ++           +   S   
Sbjct: 54  IVTIESSGIAPAVMTGLKLGVPVVFARKHKSLTLTDNLLTASVYSFTKQTESQIAVSGTH 113

Query: 172 ISELPPIDAVLI 183
           +S+    D VLI
Sbjct: 114 LSDQ---DHVLI 122


>3ITA-A nrPDB
          Length = 352

 Score = 28.1 bits (61), Expect = 6.8,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 32/97 (32%), Gaps = 7/97 (7%)

Query: 221 KCGCENVIELDWWEENCVPGHDKVTFVFTPSQHWCKRTL-----MDDNKVLWGSWSVLGP 275
           +    + + +D  +     G      V + +Q   +          D ++ +     L  
Sbjct: 196 RLLWSSNLNVDGMKTGTTAGAG-YNLVASATQGDMRLISVVLGAKTD-RIRFNESEKLLT 253

Query: 276 WNRFFFAGDTGYCPAFEEIGKRFGPFDLAAIPIGAYE 312
           W   FF   T   P    + +R    D + + +GA E
Sbjct: 254 WGFRFFETVTPIKPDATFVTQRVWFGDKSEVNLGAGE 290


>4KXA-A nrPDB
          Length = 888

 Score = 27.7 bits (60), Expect = 9.0,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 16/43 (37%), Gaps = 5/43 (11%)

Query: 224 CENVIELDWWEENCVPGHDKVTFVFTPSQHWCKRTLMDDNKVL 266
             N++ +DWWE+  +       F F    H        D ++ 
Sbjct: 325 FGNIVTMDWWEDLWLNEGFASFFEFLGVNH-----AETDWQMR 362


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.315    0.133    0.391 

Lambda     K      H
   0.267   0.0414    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,885,240
Number of Sequences: 36641
Number of extensions: 724914
Number of successful extensions: 1749
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 1728
Number of HSP's gapped (non-prelim): 35
length of query: 393
length of database: 10,336,785
effective HSP length: 99
effective length of query: 294
effective length of database: 6,709,326
effective search space: 1972541844
effective search space used: 1972541844
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)