BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q64536 (407 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 3CRK-A nrPDB 851 0.0 2Q8F-A nrPDB 598 e-171 1Y8N-A nrPDB 577 e-165 2E0A-A nrPDB 567 e-162 4DZY-A nrPDB 166 1e-41 3SL2-A nrPDB 44 2e-04 4I5S-A nrPDB 37 0.015 4U7O-A nrPDB 35 0.070 6AZR-A nrPDB 35 0.073 4GCZ-A nrPDB 35 0.083 4PL9-A nrPDB 32 0.37 1RY6-A nrPDB 32 0.51 4RIT-B nrPDB 31 0.93 5LFK-A nrPDB 30 2.0 4XEM-A nrPDB 29 4.6 4DH2-B nrPDB 29 4.6 4PU9-A nrPDB 28 6.1 3D36-A nrPDB 28 7.3 5MMP-A nrPDB 28 8.4 >3CRK-A nrPDB Length = 407 Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust. Identities = 407/407 (100%), Positives = 407/407 (100%) Query: 1 MRWFRALLKNASLAGAPKYIEHFSKFSPSPLSMKQFLDFGSSNACEKTSFTFLRQELPVR 60 MRWFRALLKNASLAGAPKYIEHFSKFSPSPLSMKQFLDFGSSNACEKTSFTFLRQELPVR Sbjct: 1 MRWFRALLKNASLAGAPKYIEHFSKFSPSPLSMKQFLDFGSSNACEKTSFTFLRQELPVR 60 Query: 61 LANIMKEINLLPDRVLSTPSVQLVQSWYVQSLLDIMEFLDKDPEDHRTLSQFTDALVTIR 120 LANIMKEINLLPDRVLSTPSVQLVQSWYVQSLLDIMEFLDKDPEDHRTLSQFTDALVTIR Sbjct: 61 LANIMKEINLLPDRVLSTPSVQLVQSWYVQSLLDIMEFLDKDPEDHRTLSQFTDALVTIR 120 Query: 121 NRHNDVVPTMAQGVLEYKDTYGDDPVSNQNIQYFLDRFYLSRISIRMLINQHTLIFDGST 180 NRHNDVVPTMAQGVLEYKDTYGDDPVSNQNIQYFLDRFYLSRISIRMLINQHTLIFDGST Sbjct: 121 NRHNDVVPTMAQGVLEYKDTYGDDPVSNQNIQYFLDRFYLSRISIRMLINQHTLIFDGST 180 Query: 181 NPAHPKHIGSIDPNCSVSDVVKDAYDMAKLLCDKYYMASPDLEIQEVNATNATQPIHMVY 240 NPAHPKHIGSIDPNCSVSDVVKDAYDMAKLLCDKYYMASPDLEIQEVNATNATQPIHMVY Sbjct: 181 NPAHPKHIGSIDPNCSVSDVVKDAYDMAKLLCDKYYMASPDLEIQEVNATNATQPIHMVY 240 Query: 241 VPSHLYHMLFELFKNAMRATVESHESSLTLPPIKIMVALGEEDLSIKMSDRGGGVPLRKI 300 VPSHLYHMLFELFKNAMRATVESHESSLTLPPIKIMVALGEEDLSIKMSDRGGGVPLRKI Sbjct: 241 VPSHLYHMLFELFKNAMRATVESHESSLTLPPIKIMVALGEEDLSIKMSDRGGGVPLRKI 300 Query: 301 ERLFSYMYSTAPTPQPGTGGTPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVIYL 360 ERLFSYMYSTAPTPQPGTGGTPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVIYL Sbjct: 301 ERLFSYMYSTAPTPQPGTGGTPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVIYL 360 Query: 361 KALSTDSVERLPVYNKSAWRHYQTIQEAGDWCVPSTEPKNTSTYRVS 407 KALSTDSVERLPVYNKSAWRHYQTIQEAGDWCVPSTEPKNTSTYRVS Sbjct: 361 KALSTDSVERLPVYNKSAWRHYQTIQEAGDWCVPSTEPKNTSTYRVS 407 >2Q8F-A nrPDB Length = 407 Score = 598 bits (1542), Expect = e-171, Method: Compositional matrix adjust. Identities = 274/398 (68%), Positives = 339/398 (85%), Gaps = 3/398 (0%) Query: 11 ASLAGAPKYIEHFSKFSPSPLSMKQFLDFGSSNACEKTSFTFLRQELPVRLANIMKEINL 70 AS G P ++ +++FSPSPLSMKQFLDFGS NACEKTSF FLRQELPVRLANIMKEI+L Sbjct: 8 ASERGVPGQVDFYARFSPSPLSMKQFLDFGSVNACEKTSFMFLRQELPVRLANIMKEISL 67 Query: 71 LPDRVLSTPSVQLVQSWYVQSLLDIMEFLDKDPEDHRTLSQFTDALVTIRNRHNDVVPTM 130 LPD +L TPSVQLVQSWY+QSL ++++F DK ED + + FTD ++ IRNRHNDV+PTM Sbjct: 68 LPDNLLRTPSVQLVQSWYIQSLQELLDFKDKSAEDAKAIYDFTDTVIRIRNRHNDVIPTM 127 Query: 131 AQGVLEYKDTYGDDPVSNQNIQYFLDRFYLSRISIRMLINQHTLIF--DGSTNPAHPKHI 188 AQGV+EYK+++G DPV++QN+QYFLDRFY+SRISIRML+NQH+L+F G +P+H KHI Sbjct: 128 AQGVIEYKESFGVDPVTSQNVQYFLDRFYMSRISIRMLLNQHSLLFGGKGKGSPSHRKHI 187 Query: 189 GSIDPNCSVSDVVKDAYDMAKLLCDKYYMASPDLEIQEVNATNATQPIHMVYVPSHLYHM 248 GSI+PNC+V +V+KD Y+ A+ LCD YY+ SP+LE++E+NA + QPI +VYVPSHLYHM Sbjct: 188 GSINPNCNVLEVIKDGYENARRLCDLYYINSPELELEELNAKSPGQPIQVVYVPSHLYHM 247 Query: 249 LFELFKNAMRATVESHESSLTLPPIKIMVALGEEDLSIKMSDRGGGVPLRKIERLFSYMY 308 +FELFKNAMRAT+E H + PPI++ V LG EDL++KMSDRGGGVPLRKI+RLF+YMY Sbjct: 248 VFELFKNAMRATMEHHANRGVYPPIQVHVTLGNEDLTVKMSDRGGGVPLRKIDRLFNYMY 307 Query: 309 STAPTPQPGTG-GTPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVIYLKALSTDS 367 STAP P+ T PLAGFGYGLPISRLYA+YFQGDL+L+S+EG+GTDAVIY+KALSTDS Sbjct: 308 STAPRPRVETSRAVPLAGFGYGLPISRLYAQYFQGDLKLYSLEGYGTDAVIYIKALSTDS 367 Query: 368 VERLPVYNKSAWRHYQTIQEAGDWCVPSTEPKNTSTYR 405 +ERLPVYNK+AW+HY T EA DWCVPS EPK+ +T+R Sbjct: 368 IERLPVYNKAAWKHYNTNHEADDWCVPSREPKDMTTFR 405 >1Y8N-A nrPDB Length = 419 Score = 577 bits (1487), Expect = e-165, Method: Compositional matrix adjust. Identities = 272/407 (66%), Positives = 331/407 (81%), Gaps = 7/407 (1%) Query: 6 ALLKNASLAG---APKYIEHFSKFSPSPLSMKQFLDFGSSNACEKTSFTFLRQELPVRLA 62 A L+N G PK IE +S+FSPSPLS+KQFLDFG NACEKTS+ FLR+ELPVRLA Sbjct: 12 ARLENLYFQGKQPVPKQIERYSRFSPSPLSIKQFLDFGRDNACEKTSYMFLRKELPVRLA 71 Query: 63 NIMKEINLLPDRVLSTPSVQLVQSWYVQSLLDIMEFLDKDPEDHRTLSQFTDALVTIRNR 122 N M+E+NLLPD +L+ PSV LVQSWY+QS L+++E+ +K PED + L F L+ +RNR Sbjct: 72 NTMREVNLLPDNLLNRPSVGLVQSWYMQSFLELLEYENKSPEDPQVLDNFLQVLIKVRNR 131 Query: 123 HNDVVPTMAQGVLEYKDTYGDDPVSNQNIQYFLDRFYLSRISIRMLINQHTLIFDGSTNP 182 HNDVVPTMAQGV+EYK+ +G DP + NIQYFLDRFY +RIS RMLINQHTL+F G TNP Sbjct: 132 HNDVVPTMAQGVIEYKEKFGFDPFISTNIQYFLDRFYTNRISFRMLINQHTLLFGGDTNP 191 Query: 183 AHPKHIGSIDPNCSVSDVVKDAYDMAKLLCDKYYMASPDLEIQEVNATNATQPIHMVYVP 242 HPKHIGSIDP C+V+DVVKDAY+ AK+LC++YY+ +P+LE++E NA +PI +VYVP Sbjct: 192 VHPKHIGSIDPTCNVADVVKDAYETAKMLCEQYYLVAPELEVEEFNAKAPDKPIQVVYVP 251 Query: 243 SHLYHMLFELFKNAMRATVESHESSLT-LPPIKIMVALGEEDLSIKMSDRGGGVPLRKIE 301 SHL+HMLFELFKN+MRATVE +E P +K +V LG+EDLSIK+SD GGGVPLRKI+ Sbjct: 252 SHLFHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKISDLGGGVPLRKID 311 Query: 302 RLFSYMYSTAPTP--QPGTGGTPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVIY 359 RLF+YMYSTAP P +P T PLAGFGYGLPISRLYA+YFQGDL+L+SMEG GTDAVIY Sbjct: 312 RLFNYMYSTAPRPSLEP-TRAAPLAGFGYGLPISRLYARYFQGDLKLYSMEGVGTDAVIY 370 Query: 360 LKALSTDSVERLPVYNKSAWRHYQTIQEAGDWCVPSTEPKNTSTYRV 406 LKALS++S ERLPV+NKSAWRHY+T EA DW PS+EP++ S Y+ Sbjct: 371 LKALSSESFERLPVFNKSAWRHYKTTPEADDWSNPSSEPRDASKYKA 417 >2E0A-A nrPDB Length = 394 Score = 567 bits (1461), Expect = e-162, Method: Compositional matrix adjust. Identities = 257/386 (66%), Positives = 326/386 (84%), Gaps = 2/386 (0%) Query: 16 APKYIEHFSKFSPSPLSMKQFLDFGSSNACEKTSFTFLRQELPVRLANIMKEINLLPDRV 75 P+ +EHFS++SPSPLSMKQ LDFGS NACE+TSF FLRQELPVRLANI+KEI++LP ++ Sbjct: 3 VPREVEHFSRYSPSPLSMKQLLDFGSENACERTSFAFLRQELPVRLANILKEIDILPTQL 62 Query: 76 LSTPSVQLVQSWYVQSLLDIMEFLDKDPEDHRTLSQFTDALVTIRNRHNDVVPTMAQGVL 135 ++T SVQLV+SWY+QSL+D++EF +K P+D + LS F D L+ +RNRH++VVPTMAQG++ Sbjct: 63 VNTSSVQLVKSWYIQSLMDLVEFHEKSPDDQKALSDFVDTLIKVRNRHHNVVPTMAQGII 122 Query: 136 EYKDTYGDDPVSNQNIQYFLDRFYLSRISIRMLINQHTLIFDGSTNPAHPKHIGSIDPNC 195 EYKD DPV+NQN+QYFLDRFY++RIS RML+NQH LIF S +P HIGSIDPNC Sbjct: 123 EYKDACTVDPVTNQNLQYFLDRFYMNRISTRMLMNQHILIFSDSQT-GNPSHIGSIDPNC 181 Query: 196 SVSDVVKDAYDMAKLLCDKYYMASPDLEIQEVNATNATQPIHMVYVPSHLYHMLFELFKN 255 V VV+DA++ +++LCD+YY++SP+L++ +VN QPIH+VYVPSHL+HMLFELFKN Sbjct: 182 DVVAVVQDAFECSRMLCDQYYLSSPELKLTQVNGKFPDQPIHIVYVPSHLHHMLFELFKN 241 Query: 256 AMRATVESHESSLTLPPIKIMVALGEEDLSIKMSDRGGGVPLRKIERLFSYMYSTAPTP- 314 AMRATVE E+ +L PI+++V LG+EDL+IK+SDRGGGVPLR I+RLFSY YSTAPTP Sbjct: 242 AMRATVEHQENQPSLTPIEVIVVLGKEDLTIKISDRGGGVPLRIIDRLFSYTYSTAPTPV 301 Query: 315 QPGTGGTPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVIYLKALSTDSVERLPVY 374 + PLAGFGYGLPISRLYAKYFQGDL L+S+ G+GTDA+IYLKALS++S+E+LPV+ Sbjct: 302 MDNSRNAPLAGFGYGLPISRLYAKYFQGDLNLYSLSGYGTDAIIYLKALSSESIEKLPVF 361 Query: 375 NKSAWRHYQTIQEAGDWCVPSTEPKN 400 NKSA++HYQ EA DWC+PS EPKN Sbjct: 362 NKSAFKHYQMSSEADDWCIPSREPKN 387 >4DZY-A nrPDB Length = 418 Score = 166 bits (421), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 111/338 (32%), Positives = 173/338 (51%), Gaps = 37/338 (10%) Query: 49 SFTFLRQELPVRLANIMKEINLLPDRVLSTPSVQLVQSWYVQSLLDIMEFLD-KDPEDHR 107 S +L+QELPVR+A+ +K LP + P++ V Y+++ + +F KD D Sbjct: 90 SGRYLQQELPVRIAHRIKGFRSLPFIIGCNPTILHVHELYIRAFQKLTDFPPIKDQADEA 149 Query: 108 TLSQFTDALVTIRNRHNDVVPTMAQGVLEYKDTYGDDPVSNQNIQYFLDRFYLSRISIRM 167 Q L+ + H DVV +A+G+ E + D+ + ++YFLD+ SR+ IRM Sbjct: 150 QYCQLVRQLL---DDHKDVVTLLAEGLRESRKHIEDEKL----VRYFLDKTLTSRLGIRM 202 Query: 168 LINQHTLIFDGSTNPAHPKHIGSIDPNCSVSDVVKDAYDMAKLLCDKYYMASPDLEIQEV 227 L H + + P +G I S +++ D A+ LC+ Y +P + I Sbjct: 203 LATHHLALHEDK-----PDFVGIICTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRI--- 254 Query: 228 NATNATQPIHMVYVPSHLYHMLFELFKNAMRATVESH-ESSLTLPPIKIMVALGEEDLSI 286 N ++P L ++L EL KNAMRAT+ESH ++ +P + I +A + DL I Sbjct: 255 ---NGHVAARFPFIPMPLDYILPELLKNAMRATMESHLDTPYNVPDVVITIANNDVDLII 311 Query: 287 KMSDRGGGVPLRKIERLFSYMYSTA------PTPQP---------GTGGTPLAGFGYGLP 331 ++SDRGGG+ + ++R+ Y ++TA P P G P+ GFG+GLP Sbjct: 312 RISDRGGGIAHKDLDRVMDYHFTTAEASTQDPRISPLFGHLDMHSGGQSGPMHGFGFGLP 371 Query: 332 ISRLYAKYFQGDLQLFSMEGFGTDAVIYLKALSTDSVE 369 SR YA+Y G LQL S++G GTD +YL+ D E Sbjct: 372 TSRAYAEYLGGSLQLQSLQGIGTD--VYLRLRHIDGRE 407 >3SL2-A nrPDB Length = 177 Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 10/110 (9%) Query: 245 LYHMLFELFKNAMRATVESHESSLTLPPIKIMVALGEEDLSIKMSDRGGGVPLRKIERLF 304 + +L + NA++ + E + ++ V EE L I + D G G+P + +E++F Sbjct: 44 ITQVLDNIISNALKYSPEGGHVTFSID-----VNEEEELLYISVKDEGIGIPKKDVEKVF 98 Query: 305 SYMYSTAPTPQPGTGGTPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGT 354 Y GGT G GL I++ + GD+ S+EG GT Sbjct: 99 DRFYRVDKARTRKLGGT-----GLGLAIAKEMVQAHGGDIWADSIEGKGT 143 >4I5S-A nrPDB Length = 450 Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust. Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 5/89 (5%) Query: 272 PIKIMVALGEEDLSIKMSDRGGGVPLRKIERLFSYMYSTAPTPQPGTGGTPLAGFGYGLP 331 + I + + L + +SD+G G+P + + +F Y GGT G GL Sbjct: 348 KVTITMQTTDTQLILSISDQGLGIPKKDLPLIFDRFYRVDKARSRAQGGT-----GLGLA 402 Query: 332 ISRLYAKYFQGDLQLFSMEGFGTDAVIYL 360 I++ K +G + S EG G+ I L Sbjct: 403 IAKEIVKQHKGFIWANSEEGEGSTFTIVL 431 >4U7O-A nrPDB Length = 277 Score = 34.7 bits (78), Expect = 0.070, Method: Compositional matrix adjust. Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 5/75 (6%) Query: 286 IKMSDRGGGVPLRKIERLFSYMYSTAPTPQPGTGGTPLAGFGYGLPISRLYAKYFQGDLQ 345 I +SD+G G+P + +F + GGT G GL IS+ + G + Sbjct: 191 ISISDQGLGIPRADLGHVFDRFFRVDKARSRAQGGT-----GLGLAISKEVVQMLGGRIW 245 Query: 346 LFSMEGFGTDAVIYL 360 + S+EG G+ I L Sbjct: 246 VDSVEGKGSTFYISL 260 >6AZR-A nrPDB Length = 259 Score = 34.7 bits (78), Expect = 0.073, Method: Compositional matrix adjust. Identities = 32/136 (23%), Positives = 56/136 (41%), Gaps = 19/136 (13%) Query: 230 TNATQPIHMVYVPSHLYHMLFELFKNAMRATVESHESSLTLPPIKIMVALGEED--LSIK 287 +N P+ P+ + +L L N ++ S P + V L E+D + I Sbjct: 125 SNVPCPVEAYIDPTRIRQVLLNLLNNGVKY------SKKDAPDKYVKVILDEKDGGVLII 178 Query: 288 MSDRGGGVPLRKIERLFSYMY---STAPTPQPGTGGTPLAGFGYGLPISRLYAKYFQGDL 344 + D G G+P +R+F Y S+ PGT G GL I++ + G + Sbjct: 179 VEDNGIGIPDHAKDRIFEQFYRVDSSLTYEVPGT--------GLGLAITKEIVELHGGRI 230 Query: 345 QLFSMEGFGTDAVIYL 360 + S G G+ +++ Sbjct: 231 WVESEVGKGSRFFVWI 246 >4GCZ-A nrPDB Length = 385 Score = 34.7 bits (78), Expect = 0.083, Method: Compositional matrix adjust. Identities = 26/94 (27%), Positives = 38/94 (40%), Gaps = 21/94 (22%) Query: 244 HLYHMLFELFKNAMRATVESHESSLTL---PPIKIMVALGEEDLSIKMSDRGGGVPLRKI 300 + +L LF+NA+ A +S L + P M+ +++SD G G I Sbjct: 268 QIQQVLVNLFRNALEAMAQSQRRELVVTNTPAADDMI-------EVEVSDTGSGFQDDVI 320 Query: 301 ERLFSYMYSTAPTPQPGTGGTPLAGFGYGLPISR 334 LF ++T T G G GL ISR Sbjct: 321 PNLFQTFFTTKDT-----------GMGVGLSISR 343 >4PL9-A nrPDB Length = 183 Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust. Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 6/70 (8%) Query: 284 LSIKMSDRGGGVPLRKIERLFSYMYSTAPTPQPGTGGTPLAGFGYGLPISRLYAKYFQGD 343 L +K+ D G G+ + I ++F+ T +GG+ G GL IS+ + +G+ Sbjct: 101 LRVKVKDSGAGINPQDIPKIFTKFAQTQSLATRSSGGS-----GLGLAISKRFVNLMEGN 155 Query: 344 LQLFSMEGFG 353 + + S +G G Sbjct: 156 IWIES-DGLG 164 >1RY6-A nrPDB Length = 360 Score = 32.0 bits (71), Expect = 0.51, Method: Compositional matrix adjust. Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 4/53 (7%) Query: 249 LFELF-KNAMRATVESHESSLTLPPIKIMVALGEEDLSIKMSDRGGGVPLRKI 300 L++L K M A +E+ + + + +KI+ L +E+L +KM D GV LRKI Sbjct: 151 LYDLLQKRKMVAALENGKKEVVVKDLKILRVLTKEELILKMID---GVLLRKI 200 >4RIT-B nrPDB Length = 486 Score = 31.2 bits (69), Expect = 0.93, Method: Compositional matrix adjust. Identities = 12/29 (41%), Positives = 19/29 (65%) Query: 175 IFDGSTNPAHPKHIGSIDPNCSVSDVVKD 203 + DGS NPA+P +IG +DP + ++ D Sbjct: 78 MVDGSMNPANPGYIGHMDPMPATMAILGD 106 >5LFK-A nrPDB Length = 298 Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust. Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 16/167 (9%) Query: 194 NCSVSDVVKDAYDMAKLLCDKYYMASPDLEIQEVNATNATQPIHMVYVPSHLYHMLFELF 253 N VS+ +K +++L + + A + VN P++ P+ L L + Sbjct: 142 NALVSETIKANQLWSEVLDNAAFEAEQMGKSLTVNFPPGPWPLY--GNPNALESALENIV 199 Query: 254 KNAMRATVESHESSLTLPPIKIMVALGEEDLSIKMSDRGGGVPLRKIERLFSYMYSTAPT 313 +NA+R SH I++ A+ ++ ++I + D G GV E++F Y T Sbjct: 200 RNALRY---SHTK------IEVGFAVDKDGITITVDDDGPGVSPEDREQIFRPFYRTDEA 250 Query: 314 PQPGTGGTPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVIYL 360 +GGT G GL I + +G ++ G VI+L Sbjct: 251 RDRESGGT-----GLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIWL 292 >4XEM-A nrPDB Length = 475 Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 31/76 (40%), Gaps = 18/76 (23%) Query: 328 YGLPISRLYAKYFQGDLQLFSMEGFGTDAVIYLKA----LSTDSVERLPVYNKSAWRHYQ 383 +G+PI RLY YF GD E G +A + K L D + LP K Sbjct: 146 FGIPIERLYVTYFGGD------EAAGLEADLECKQIWQNLGLDDTKILPGNMKD------ 193 Query: 384 TIQEAGDW--CVPSTE 397 E GD C P +E Sbjct: 194 NFWEMGDTGPCGPCSE 209 >4DH2-B nrPDB Length = 82 Score = 28.9 bits (63), Expect = 4.6, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 4/71 (5%) Query: 188 IGSIDPN--CSVSDVVKDAYDMAKLLCDKYYMASPDLEIQEVNATNATQPIHMVYVPSHL 245 IG ++ + ++SD V + +++ D + A D+ + +VN N I Y+ +L Sbjct: 7 IGDVNADGVVNISDYVLMKRYILRIIAD--FPADDDMWVGDVNGDNVINDIDCNYLKRYL 64 Query: 246 YHMLFELFKNA 256 HM+ E KN+ Sbjct: 65 LHMIREFPKNS 75 >4PU9-A nrPDB Length = 398 Score = 28.5 bits (62), Expect = 6.1, Method: Compositional matrix adjust. Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 8/52 (15%) Query: 245 LYHMLFELFKNAMRATVESHESSLTLPPIKIMVALGEEDLSIKMSDRGGGVP 296 L+HM+FE+ NA+ + H K ++ D S+ + D G G+P Sbjct: 42 LHHMVFEVVDNAIDEALAGH--------CKEIIVTIHADNSVSVQDDGRGIP 85 >3D36-A nrPDB Length = 244 Score = 28.1 bits (61), Expect = 7.3, Method: Compositional matrix adjust. Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 13/106 (12%) Query: 255 NAMRATVESHESSLTLPPIKIMVALGEEDLSIKMSDRGGGVPLRKIERLFSYMYSTAPTP 314 N M+ +E+ + TL ++ V++ + I+++D G G+ ++ERL ++T Sbjct: 130 NVMKNAIEAMPNGGTL---QVYVSIDNGRVLIRIADTGVGMTKEQLERLGEPYFTT---- 182 Query: 315 QPGTGGTPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVIYL 360 G GT G G+ + + G +++ S GT IYL Sbjct: 183 -KGVKGT-----GLGMMVVYRIIESMNGTIRIESEIHKGTTVSIYL 222 >5MMP-A nrPDB Length = 234 Score = 27.7 bits (60), Expect = 8.4, Method: Compositional matrix adjust. Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 8/52 (15%) Query: 245 LYHMLFELFKNAMRATVESHESSLTLPPIKIMVALGEEDLSIKMSDRGGGVP 296 L+HM+FE+ NA+ + H K ++ D S+ + D G G+P Sbjct: 50 LHHMVFEVVDNAIDEALAGH--------CKEIIVTIHADNSVSVQDDGRGIP 93 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 3CRK-A nrPDB 711 0.0 2Q8F-A nrPDB 674 0.0 1Y8N-A nrPDB 657 0.0 2E0A-A nrPDB 639 0.0 4DZY-A nrPDB 411 e-115 3SL2-A nrPDB 135 3e-32 Sequences not found previously or not previously below threshold: 4I5S-A nrPDB 93 2e-19 4U7O-A nrPDB 89 4e-18 6AZR-A nrPDB 73 2e-13 5LFK-A nrPDB 58 9e-09 4PL9-A nrPDB 55 6e-08 4GCZ-A nrPDB 52 4e-07 4Q20-A nrPDB 52 5e-07 6BLK-C nrPDB 48 9e-06 1ID0-A nrPDB 47 1e-05 3D36-A nrPDB 47 1e-05 1R62-A nrPDB 47 2e-05 1MX0-A nrPDB 46 3e-05 2ZBK-B nrPDB 46 3e-05 6DK7-A nrPDB 44 1e-04 3CGZ-A nrPDB 43 3e-04 1YSR-A nrPDB 39 0.004 3JZ3-A nrPDB 37 0.014 5IDM-A nrPDB 37 0.016 5IDJ-A nrPDB 37 0.016 4XIV-A nrPDB 35 0.046 1I5D-A nrPDB 35 0.046 1XRE-A nrPDB 35 0.084 3JA6-C nrPDB 34 0.086 4JPB-A nrPDB 33 0.20 5CPH-A nrPDB 32 0.39 4URM-A nrPDB 32 0.39 5MMP-A nrPDB 31 0.85 4PU9-A nrPDB 31 0.85 4XEM-A nrPDB 31 1.1 1TID-A nrPDB 30 1.2 5AA5-C nrPDB 30 1.6 4KP4-A nrPDB 30 1.7 4CTI-A nrPDB 30 1.7 1BXD-A nrPDB 30 1.7 4OKD-A nrPDB 30 2.4 3ZKD-A nrPDB 30 2.5 4KPA-A nrPDB 29 4.7 >3CRK-A nrPDB Length = 407 Score = 711 bits (1836), Expect = 0.0, Method: Composition-based stats. Identities = 407/407 (100%), Positives = 407/407 (100%) Query: 1 MRWFRALLKNASLAGAPKYIEHFSKFSPSPLSMKQFLDFGSSNACEKTSFTFLRQELPVR 60 MRWFRALLKNASLAGAPKYIEHFSKFSPSPLSMKQFLDFGSSNACEKTSFTFLRQELPVR Sbjct: 1 MRWFRALLKNASLAGAPKYIEHFSKFSPSPLSMKQFLDFGSSNACEKTSFTFLRQELPVR 60 Query: 61 LANIMKEINLLPDRVLSTPSVQLVQSWYVQSLLDIMEFLDKDPEDHRTLSQFTDALVTIR 120 LANIMKEINLLPDRVLSTPSVQLVQSWYVQSLLDIMEFLDKDPEDHRTLSQFTDALVTIR Sbjct: 61 LANIMKEINLLPDRVLSTPSVQLVQSWYVQSLLDIMEFLDKDPEDHRTLSQFTDALVTIR 120 Query: 121 NRHNDVVPTMAQGVLEYKDTYGDDPVSNQNIQYFLDRFYLSRISIRMLINQHTLIFDGST 180 NRHNDVVPTMAQGVLEYKDTYGDDPVSNQNIQYFLDRFYLSRISIRMLINQHTLIFDGST Sbjct: 121 NRHNDVVPTMAQGVLEYKDTYGDDPVSNQNIQYFLDRFYLSRISIRMLINQHTLIFDGST 180 Query: 181 NPAHPKHIGSIDPNCSVSDVVKDAYDMAKLLCDKYYMASPDLEIQEVNATNATQPIHMVY 240 NPAHPKHIGSIDPNCSVSDVVKDAYDMAKLLCDKYYMASPDLEIQEVNATNATQPIHMVY Sbjct: 181 NPAHPKHIGSIDPNCSVSDVVKDAYDMAKLLCDKYYMASPDLEIQEVNATNATQPIHMVY 240 Query: 241 VPSHLYHMLFELFKNAMRATVESHESSLTLPPIKIMVALGEEDLSIKMSDRGGGVPLRKI 300 VPSHLYHMLFELFKNAMRATVESHESSLTLPPIKIMVALGEEDLSIKMSDRGGGVPLRKI Sbjct: 241 VPSHLYHMLFELFKNAMRATVESHESSLTLPPIKIMVALGEEDLSIKMSDRGGGVPLRKI 300 Query: 301 ERLFSYMYSTAPTPQPGTGGTPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVIYL 360 ERLFSYMYSTAPTPQPGTGGTPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVIYL Sbjct: 301 ERLFSYMYSTAPTPQPGTGGTPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVIYL 360 Query: 361 KALSTDSVERLPVYNKSAWRHYQTIQEAGDWCVPSTEPKNTSTYRVS 407 KALSTDSVERLPVYNKSAWRHYQTIQEAGDWCVPSTEPKNTSTYRVS Sbjct: 361 KALSTDSVERLPVYNKSAWRHYQTIQEAGDWCVPSTEPKNTSTYRVS 407 >2Q8F-A nrPDB Length = 407 Score = 674 bits (1739), Expect = 0.0, Method: Composition-based stats. Identities = 274/400 (68%), Positives = 340/400 (85%), Gaps = 3/400 (0%) Query: 11 ASLAGAPKYIEHFSKFSPSPLSMKQFLDFGSSNACEKTSFTFLRQELPVRLANIMKEINL 70 AS G P ++ +++FSPSPLSMKQFLDFGS NACEKTSF FLRQELPVRLANIMKEI+L Sbjct: 8 ASERGVPGQVDFYARFSPSPLSMKQFLDFGSVNACEKTSFMFLRQELPVRLANIMKEISL 67 Query: 71 LPDRVLSTPSVQLVQSWYVQSLLDIMEFLDKDPEDHRTLSQFTDALVTIRNRHNDVVPTM 130 LPD +L TPSVQLVQSWY+QSL ++++F DK ED + + FTD ++ IRNRHNDV+PTM Sbjct: 68 LPDNLLRTPSVQLVQSWYIQSLQELLDFKDKSAEDAKAIYDFTDTVIRIRNRHNDVIPTM 127 Query: 131 AQGVLEYKDTYGDDPVSNQNIQYFLDRFYLSRISIRMLINQHTLIFD--GSTNPAHPKHI 188 AQGV+EYK+++G DPV++QN+QYFLDRFY+SRISIRML+NQH+L+F G +P+H KHI Sbjct: 128 AQGVIEYKESFGVDPVTSQNVQYFLDRFYMSRISIRMLLNQHSLLFGGKGKGSPSHRKHI 187 Query: 189 GSIDPNCSVSDVVKDAYDMAKLLCDKYYMASPDLEIQEVNATNATQPIHMVYVPSHLYHM 248 GSI+PNC+V +V+KD Y+ A+ LCD YY+ SP+LE++E+NA + QPI +VYVPSHLYHM Sbjct: 188 GSINPNCNVLEVIKDGYENARRLCDLYYINSPELELEELNAKSPGQPIQVVYVPSHLYHM 247 Query: 249 LFELFKNAMRATVESHESSLTLPPIKIMVALGEEDLSIKMSDRGGGVPLRKIERLFSYMY 308 +FELFKNAMRAT+E H + PPI++ V LG EDL++KMSDRGGGVPLRKI+RLF+YMY Sbjct: 248 VFELFKNAMRATMEHHANRGVYPPIQVHVTLGNEDLTVKMSDRGGGVPLRKIDRLFNYMY 307 Query: 309 STAPTPQPGT-GGTPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVIYLKALSTDS 367 STAP P+ T PLAGFGYGLPISRLYA+YFQGDL+L+S+EG+GTDAVIY+KALSTDS Sbjct: 308 STAPRPRVETSRAVPLAGFGYGLPISRLYAQYFQGDLKLYSLEGYGTDAVIYIKALSTDS 367 Query: 368 VERLPVYNKSAWRHYQTIQEAGDWCVPSTEPKNTSTYRVS 407 +ERLPVYNK+AW+HY T EA DWCVPS EPK+ +T+R + Sbjct: 368 IERLPVYNKAAWKHYNTNHEADDWCVPSREPKDMTTFRSA 407 >1Y8N-A nrPDB Length = 419 Score = 657 bits (1694), Expect = 0.0, Method: Composition-based stats. Identities = 271/406 (66%), Positives = 329/406 (81%), Gaps = 5/406 (1%) Query: 6 ALLKNASLAG---APKYIEHFSKFSPSPLSMKQFLDFGSSNACEKTSFTFLRQELPVRLA 62 A L+N G PK IE +S+FSPSPLS+KQFLDFG NACEKTS+ FLR+ELPVRLA Sbjct: 12 ARLENLYFQGKQPVPKQIERYSRFSPSPLSIKQFLDFGRDNACEKTSYMFLRKELPVRLA 71 Query: 63 NIMKEINLLPDRVLSTPSVQLVQSWYVQSLLDIMEFLDKDPEDHRTLSQFTDALVTIRNR 122 N M+E+NLLPD +L+ PSV LVQSWY+QS L+++E+ +K PED + L F L+ +RNR Sbjct: 72 NTMREVNLLPDNLLNRPSVGLVQSWYMQSFLELLEYENKSPEDPQVLDNFLQVLIKVRNR 131 Query: 123 HNDVVPTMAQGVLEYKDTYGDDPVSNQNIQYFLDRFYLSRISIRMLINQHTLIFDGSTNP 182 HNDVVPTMAQGV+EYK+ +G DP + NIQYFLDRFY +RIS RMLINQHTL+F G TNP Sbjct: 132 HNDVVPTMAQGVIEYKEKFGFDPFISTNIQYFLDRFYTNRISFRMLINQHTLLFGGDTNP 191 Query: 183 AHPKHIGSIDPNCSVSDVVKDAYDMAKLLCDKYYMASPDLEIQEVNATNATQPIHMVYVP 242 HPKHIGSIDP C+V+DVVKDAY+ AK+LC++YY+ +P+LE++E NA +PI +VYVP Sbjct: 192 VHPKHIGSIDPTCNVADVVKDAYETAKMLCEQYYLVAPELEVEEFNAKAPDKPIQVVYVP 251 Query: 243 SHLYHMLFELFKNAMRATVESHESSLT-LPPIKIMVALGEEDLSIKMSDRGGGVPLRKIE 301 SHL+HMLFELFKN+MRATVE +E P +K +V LG+EDLSIK+SD GGGVPLRKI+ Sbjct: 252 SHLFHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKISDLGGGVPLRKID 311 Query: 302 RLFSYMYSTAPTPQPG-TGGTPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVIYL 360 RLF+YMYSTAP P T PLAGFGYGLPISRLYA+YFQGDL+L+SMEG GTDAVIYL Sbjct: 312 RLFNYMYSTAPRPSLEPTRAAPLAGFGYGLPISRLYARYFQGDLKLYSMEGVGTDAVIYL 371 Query: 361 KALSTDSVERLPVYNKSAWRHYQTIQEAGDWCVPSTEPKNTSTYRV 406 KALS++S ERLPV+NKSAWRHY+T EA DW PS+EP++ S Y+ Sbjct: 372 KALSSESFERLPVFNKSAWRHYKTTPEADDWSNPSSEPRDASKYKA 417 >2E0A-A nrPDB Length = 394 Score = 639 bits (1649), Expect = 0.0, Method: Composition-based stats. Identities = 257/389 (66%), Positives = 327/389 (84%), Gaps = 2/389 (0%) Query: 16 APKYIEHFSKFSPSPLSMKQFLDFGSSNACEKTSFTFLRQELPVRLANIMKEINLLPDRV 75 P+ +EHFS++SPSPLSMKQ LDFGS NACE+TSF FLRQELPVRLANI+KEI++LP ++ Sbjct: 3 VPREVEHFSRYSPSPLSMKQLLDFGSENACERTSFAFLRQELPVRLANILKEIDILPTQL 62 Query: 76 LSTPSVQLVQSWYVQSLLDIMEFLDKDPEDHRTLSQFTDALVTIRNRHNDVVPTMAQGVL 135 ++T SVQLV+SWY+QSL+D++EF +K P+D + LS F D L+ +RNRH++VVPTMAQG++ Sbjct: 63 VNTSSVQLVKSWYIQSLMDLVEFHEKSPDDQKALSDFVDTLIKVRNRHHNVVPTMAQGII 122 Query: 136 EYKDTYGDDPVSNQNIQYFLDRFYLSRISIRMLINQHTLIFDGSTNPAHPKHIGSIDPNC 195 EYKD DPV+NQN+QYFLDRFY++RIS RML+NQH LIF S +P HIGSIDPNC Sbjct: 123 EYKDACTVDPVTNQNLQYFLDRFYMNRISTRMLMNQHILIFSDSQT-GNPSHIGSIDPNC 181 Query: 196 SVSDVVKDAYDMAKLLCDKYYMASPDLEIQEVNATNATQPIHMVYVPSHLYHMLFELFKN 255 V VV+DA++ +++LCD+YY++SP+L++ +VN QPIH+VYVPSHL+HMLFELFKN Sbjct: 182 DVVAVVQDAFECSRMLCDQYYLSSPELKLTQVNGKFPDQPIHIVYVPSHLHHMLFELFKN 241 Query: 256 AMRATVESHESSLTLPPIKIMVALGEEDLSIKMSDRGGGVPLRKIERLFSYMYSTAPTP- 314 AMRATVE E+ +L PI+++V LG+EDL+IK+SDRGGGVPLR I+RLFSY YSTAPTP Sbjct: 242 AMRATVEHQENQPSLTPIEVIVVLGKEDLTIKISDRGGGVPLRIIDRLFSYTYSTAPTPV 301 Query: 315 QPGTGGTPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVIYLKALSTDSVERLPVY 374 + PLAGFGYGLPISRLYAKYFQGDL L+S+ G+GTDA+IYLKALS++S+E+LPV+ Sbjct: 302 MDNSRNAPLAGFGYGLPISRLYAKYFQGDLNLYSLSGYGTDAIIYLKALSSESIEKLPVF 361 Query: 375 NKSAWRHYQTIQEAGDWCVPSTEPKNTST 403 NKSA++HYQ EA DWC+PS EPKN + Sbjct: 362 NKSAFKHYQMSSEADDWCIPSREPKNLAK 390 >4DZY-A nrPDB Length = 418 Score = 411 bits (1056), Expect = e-115, Method: Composition-based stats. Identities = 111/339 (32%), Positives = 173/339 (51%), Gaps = 37/339 (10%) Query: 49 SFTFLRQELPVRLANIMKEINLLPDRVLSTPSVQLVQSWYVQSLLDIMEFLD-KDPEDHR 107 S +L+QELPVR+A+ +K LP + P++ V Y+++ + +F KD D Sbjct: 90 SGRYLQQELPVRIAHRIKGFRSLPFIIGCNPTILHVHELYIRAFQKLTDFPPIKDQADEA 149 Query: 108 TLSQFTDALVTIRNRHNDVVPTMAQGVLEYKDTYGDDPVSNQNIQYFLDRFYLSRISIRM 167 Q L+ + H DVV +A+G+ E + D+ + ++YFLD+ SR+ IRM Sbjct: 150 QYCQLVRQLL---DDHKDVVTLLAEGLRESRKHIEDEKL----VRYFLDKTLTSRLGIRM 202 Query: 168 LINQHTLIFDGSTNPAHPKHIGSIDPNCSVSDVVKDAYDMAKLLCDKYYMASPDLEIQEV 227 L H + + P +G I S +++ D A+ LC+ Y +P + I Sbjct: 203 LATHHLALHEDK-----PDFVGIICTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRI--- 254 Query: 228 NATNATQPIHMVYVPSHLYHMLFELFKNAMRATVESH-ESSLTLPPIKIMVALGEEDLSI 286 N ++P L ++L EL KNAMRAT+ESH ++ +P + I +A + DL I Sbjct: 255 ---NGHVAARFPFIPMPLDYILPELLKNAMRATMESHLDTPYNVPDVVITIANNDVDLII 311 Query: 287 KMSDRGGGVPLRKIERLFSYMYSTA------PTPQP---------GTGGTPLAGFGYGLP 331 ++SDRGGG+ + ++R+ Y ++TA P P G P+ GFG+GLP Sbjct: 312 RISDRGGGIAHKDLDRVMDYHFTTAEASTQDPRISPLFGHLDMHSGGQSGPMHGFGFGLP 371 Query: 332 ISRLYAKYFQGDLQLFSMEGFGTDAVIYLKALSTDSVER 370 SR YA+Y G LQL S++G GTD +YL+ D E Sbjct: 372 TSRAYAEYLGGSLQLQSLQGIGTD--VYLRLRHIDGREE 408 >3SL2-A nrPDB Length = 177 Score = 135 bits (340), Expect = 3e-32, Method: Composition-based stats. Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 10/129 (7%) Query: 226 EVNATNATQPIHMVYVPSHLYHMLFELFKNAMRATVESHESSLTLPPIKIMVALGEEDLS 285 E + +++ + +L + NA++ + E + ++ V EE L Sbjct: 25 EFIRNLPDRDLYVEIDQDKITQVLDNIISNALKYSPEGGHVTFSID-----VNEEEELLY 79 Query: 286 IKMSDRGGGVPLRKIERLFSYMYSTAPTPQPGTGGTPLAGFGYGLPISRLYAKYFQGDLQ 345 I + D G G+P + +E++F Y GGT G GL I++ + GD+ Sbjct: 80 ISVKDEGIGIPKKDVEKVFDRFYRVDKARTRKLGGT-----GLGLAIAKEMVQAHGGDIW 134 Query: 346 LFSMEGFGT 354 S+EG GT Sbjct: 135 ADSIEGKGT 143 >4I5S-A nrPDB Length = 450 Score = 93.2 bits (230), Expect = 2e-19, Method: Composition-based stats. Identities = 27/138 (19%), Positives = 57/138 (41%), Gaps = 12/138 (8%) Query: 223 EIQEVNATNATQPIHMVYVPSHLYHMLFELFKNAMRATVESHESSLTLPPIKIMVALGEE 282 ++ E+ + + + + ++ + NA++ + + + + I + + Sbjct: 306 KVYEIIRDYPDKSVWIEIDTDKMTQVIDNILNNAIKYSPDGGKVT-------ITMQTTDT 358 Query: 283 DLSIKMSDRGGGVPLRKIERLFSYMYSTAPTPQPGTGGTPLAGFGYGLPISRLYAKYFQG 342 L + +SD+G G+P + + +F Y GGT G GL I++ K +G Sbjct: 359 QLILSISDQGLGIPKKDLPLIFDRFYRVDKARSRAQGGT-----GLGLAIAKEIVKQHKG 413 Query: 343 DLQLFSMEGFGTDAVIYL 360 + S EG G+ I L Sbjct: 414 FIWANSEEGEGSTFTIVL 431 >4U7O-A nrPDB Length = 277 Score = 88.6 bits (218), Expect = 4e-18, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 46/116 (39%), Gaps = 12/116 (10%) Query: 245 LYHMLFELFKNAMRATVESHESSLTLPPIKIMVALGEEDLSIKMSDRGGGVPLRKIERLF 304 +L + NA++ + + + + + I +SD+G G+P + +F Sbjct: 157 FTQVLDNIMNNAIKYSPDGGVVT-------CRLLETHNQVIISISDQGLGIPRADLGHVF 209 Query: 305 SYMYSTAPTPQPGTGGTPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVIYL 360 + GGT G GL IS+ + G + + S+EG G+ I L Sbjct: 210 DRFFRVDKARSRAQGGT-----GLGLAISKEVVQMLGGRIWVDSVEGKGSTFYISL 260 >6AZR-A nrPDB Length = 259 Score = 73.2 bits (178), Expect = 2e-13, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 52/126 (41%), Gaps = 9/126 (7%) Query: 235 PIHMVYVPSHLYHMLFELFKNAMRATVESHESSLTLPPIKIMVALGEEDLSIKMSDRGGG 294 P+ P+ + +L L N ++ + + +K+++ + + I + D G G Sbjct: 130 PVEAYIDPTRIRQVLLNLLNNGVKYSKKDAPDKY----VKVILDEKDGGVLIIVEDNGIG 185 Query: 295 VPLRKIERLFSYMYSTAPTPQPGTGGTPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGT 354 +P +R+F Y + GT G GL I++ + G + + S G G+ Sbjct: 186 IPDHAKDRIFEQFYRVDSSLTYEVPGT-----GLGLAITKEIVELHGGRIWVESEVGKGS 240 Query: 355 DAVIYL 360 +++ Sbjct: 241 RFFVWI 246 >5LFK-A nrPDB Length = 298 Score = 57.8 bits (138), Expect = 9e-09, Method: Composition-based stats. Identities = 29/119 (24%), Positives = 50/119 (42%), Gaps = 14/119 (11%) Query: 242 PSHLYHMLFELFKNAMRATVESHESSLTLPPIKIMVALGEEDLSIKMSDRGGGVPLRKIE 301 P+ L L + +NA+R + I++ A+ ++ ++I + D G GV E Sbjct: 188 PNALESALENIVRNALRYS---------HTKIEVGFAVDKDGITITVDDDGPGVSPEDRE 238 Query: 302 RLFSYMYSTAPTPQPGTGGTPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVIYL 360 ++F Y T +GGT G GL I + +G ++ G VI+L Sbjct: 239 QIFRPFYRTDEARDRESGGT-----GLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIWL 292 >4PL9-A nrPDB Length = 183 Score = 54.7 bits (130), Expect = 6e-08, Method: Composition-based stats. Identities = 28/144 (19%), Positives = 57/144 (39%), Gaps = 20/144 (13%) Query: 231 NATQPIHMVYVPSHLYHMLFELFKNAMRATVESHESSLTLPPIKIMVALGEED------- 283 P +V L ++ + NA++ + + S+++ + D Sbjct: 40 APDLPEFVVGDEKRLMQIILNIVGNAVKFSKQG---SISVTALVTKSDTRAADFFVVPTG 96 Query: 284 ----LSIKMSDRGGGVPLRKIERLFSYMYSTAPTPQPGTGGTPLAGFGYGLPISRLYAKY 339 L +K+ D G G+ + I ++F+ T +GG+ G GL IS+ + Sbjct: 97 SHFYLRVKVKDSGAGINPQDIPKIFTKFAQTQSLATRSSGGS-----GLGLAISKRFVNL 151 Query: 340 FQGDLQLFSME-GFGTDAVIYLKA 362 +G++ + S G G A+ +K Sbjct: 152 MEGNIWIESDGLGKGCTAIFDVKL 175 >4GCZ-A nrPDB Length = 385 Score = 52.4 bits (124), Expect = 4e-07, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 42/104 (40%), Gaps = 15/104 (14%) Query: 245 LYHMLFELFKNAMRATVESHESSLTLPPIKIMVALGEEDLSIKMSDRGGGVPLRKIERLF 304 + +L LF+NA+ A +S L + ++ + +++SD G G I LF Sbjct: 269 IQQVLVNLFRNALEAMAQSQRRELVVTNTPA----ADDMIEVEVSDTGSGFQDDVIPNLF 324 Query: 305 SYMYSTAPTPQPGTGGTPLAGFGYGLPISRLYAKYFQGDLQLFS 348 ++T T G G GL ISR + G + S Sbjct: 325 QTFFTTKDT-----------GMGVGLSISRSIIEAHGGRMWAES 357 >4Q20-A nrPDB Length = 268 Score = 51.6 bits (122), Expect = 5e-07, Method: Composition-based stats. Identities = 31/116 (26%), Positives = 43/116 (37%), Gaps = 18/116 (15%) Query: 245 LYHMLFELFKNAMRATVESHESSLTLPPIKIMVALGEEDLSIKMSDRGGGVPLRKIERLF 304 L L L +NA+R T +L+ ALGE L +SD G GVP +F Sbjct: 156 LAQTLDHLVENALRQTPPGGRVTLS-----ARRALGEVRL--DVSDTGRGVPFHVQAHIF 208 Query: 305 SYMYSTAPTPQPGTGGTPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVIYL 360 G P G GL + + + G + L S G G+ +L Sbjct: 209 DRFVGRD-------RGGP----GLGLALVKALVELHGGWVALESEPGNGSTFTCHL 253 >6BLK-C nrPDB Length = 158 Score = 47.8 bits (112), Expect = 9e-06, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 43/113 (38%), Gaps = 13/113 (11%) Query: 235 PIHMVYVPSHLYHMLFELFKNAMRATVESHESSLTLPPIKIMVALGEEDLSIKMSDRGGG 294 P ++ S L + + NA + + + L + G +L I +D+G G Sbjct: 37 PWQVIGDSSGLGRAVLNVLDNAAKWSPPGGRVGVRL----YQIDPGHAELVI--TDQGPG 90 Query: 295 VPLRKIERLFSYMYSTAPTPQPGTGGTPLAGFGYGLPISRLYAKYFQGDLQLF 347 +P ++ +F + +A + G G GL I + G L++ Sbjct: 91 IPPQERHLVFERFFRSASARS-------MPGSGLGLAIVKQVVLKHGGALRVD 136 >1ID0-A nrPDB Length = 152 Score = 47.0 bits (110), Expect = 1e-05, Method: Composition-based stats. Identities = 29/124 (23%), Positives = 48/124 (38%), Gaps = 19/124 (15%) Query: 247 HMLFELFKNAMRATVESHESSLTLPPIKIMVALGEEDLSIKMSDRGGGVPLRKIERLFSY 306 ++ + NA + +E ++I +E L I + D G G+PL K E +F Sbjct: 47 EVMGNVLDNACKYCLEF---------VEISARQTDEHLYIVVEDDGPGIPLSKREVIFDR 97 Query: 307 MYSTAPTPQPGTGGTPLAGFGYGLPISRLYAKYFQGDLQL-FSMEGFGTDAVIYLKALST 365 T G G GL ++R + ++G + SM G VI+ + S Sbjct: 98 GQRVD---------TLRPGQGVGLAVAREITEQYEGKIVAGESMLGGARMEVIFGRQHSA 148 Query: 366 DSVE 369 E Sbjct: 149 PKDE 152 >3D36-A nrPDB Length = 244 Score = 47.0 bits (110), Expect = 1e-05, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 47/114 (41%), Gaps = 17/114 (14%) Query: 247 HMLFELFKNAMRATVESHESSLTLPPIKIMVALGEEDLSIKMSDRGGGVPLRKIERLFSY 306 L + KNA+ A +++ V++ + I+++D G G+ ++ERL Sbjct: 126 QCLLNVMKNAIEAMPNGG-------TLQVYVSIDNGRVLIRIADTGVGMTKEQLERLGEP 178 Query: 307 MYSTAPTPQPGTGGTPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVIYL 360 ++T + G G G+ + + G +++ S GT IYL Sbjct: 179 YFTTK----------GVKGTGLGMMVVYRIIESMNGTIRIESEIHKGTTVSIYL 222 >1R62-A nrPDB Length = 160 Score = 46.6 bits (109), Expect = 2e-05, Method: Composition-based stats. Identities = 36/169 (21%), Positives = 66/169 (39%), Gaps = 18/169 (10%) Query: 199 DVVKDAYDMAKLLCDKYYMASPDLEIQEVNATNATQPIHMVYVPSHLYHMLFELFKNAMR 258 V + + +A+ + M PD ++ + + + P + + P + +L + +NA++ Sbjct: 5 RVTESIHKVAERVVTLVSMELPD-NVRLIRDYDPSLP-ELAHDPDQIEQVLLNIVRNALQ 62 Query: 259 A-TVESHESSL-TLPPIKIMVALGEEDLS--IKMSDRGGGVPLRKIERLFSYMYSTAPTP 314 A E E L T ++ + L+ I + D G G+P + LF P Sbjct: 63 ALGPEGGEIILRTRTAFQLTLHGERYRLAARIDVEDNGPGIPPHLQDTLF--------YP 114 Query: 315 QPGTGGTPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVIYLKAL 363 G G GL I+R G ++ S G T+ +YL Sbjct: 115 MVSGREG---GTGLGLSIARNLIDQHSGKIEFTSWPGH-TEFSVYLPIR 159 >1MX0-A nrPDB Length = 472 Score = 46.2 bits (108), Expect = 3e-05, Method: Composition-based stats. Identities = 27/119 (22%), Positives = 48/119 (40%), Gaps = 12/119 (10%) Query: 226 EVNATNATQPIHMVYVPSHLYHMLFELFKNAMRATVESHESSLTLPPIKIMVAL---GEE 282 E N LY + EL +N++ AT + LP IKI + L + Sbjct: 16 EFFKRNPELAG-FPNPARALYQTVRELIENSLDAT----DVHGILPNIKITIDLIDDARQ 70 Query: 283 DLSIKMSDRGGGVPLRKIERLFSYMYSTAPTPQPGTGGTPLAGFGYGLPISRLYAKYFQ 341 + + D G G+P +++ F + ++ T G +G G+ + LY++ Q Sbjct: 71 IYKVNVVDNGIGIPPQEVPNAFGRVLYSSKYVNRQTRGM----YGLGVKAAVLYSQMHQ 125 >2ZBK-B nrPDB Length = 530 Score = 45.9 bits (107), Expect = 3e-05, Method: Composition-based stats. Identities = 27/119 (22%), Positives = 48/119 (40%), Gaps = 12/119 (10%) Query: 226 EVNATNATQPIHMVYVPSHLYHMLFELFKNAMRATVESHESSLTLPPIKIMVAL---GEE 282 E N LY + EL +N++ AT + LP IKI + L + Sbjct: 14 EFFKRNPELAG-FPNPARALYQTVRELIENSLDAT----DVHGILPNIKITIDLIDDARQ 68 Query: 283 DLSIKMSDRGGGVPLRKIERLFSYMYSTAPTPQPGTGGTPLAGFGYGLPISRLYAKYFQ 341 + + D G G+P +++ F + ++ T G +G G+ + LY++ Q Sbjct: 69 IYKVNVVDNGIGIPPQEVPNAFGRVLYSSKYVNRQTRGM----YGLGVKAAVLYSQMHQ 123 >6DK7-A nrPDB Length = 227 Score = 43.9 bits (102), Expect = 1e-04, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 62/163 (38%), Gaps = 24/163 (14%) Query: 196 SVSDVVKDAYDMAKLLCDKYYMASPDLEIQEVNATNATQPIHMVYVPSHLYHMLFELFKN 255 ++ +++D D+ ++ ++ I+ ++ T P + P+ L ++ L N Sbjct: 74 DLNALIEDCLDIFRVKAEQQ-------RIELISFTQPQVPRVIGGDPTRLRQVVLSLLDN 126 Query: 256 AMRATVESHESSLTLPPIKIMVALGEE----DLSIKMSDRGGGVPLRKIERLFSYMYSTA 311 A + T E I ++VAL ++ L I + D G ++ E L TA Sbjct: 127 AFKQTEEG--------EILLVVALDDQGETPRLRIAVQDSGHPFDAKEREALL-----TA 173 Query: 312 PTPQPGTGGTPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGT 354 G GL I+R + G+ + S GT Sbjct: 174 ELHSGDFLSASKLGSHLGLIIARQLVRLMGGEFGIQSGSSQGT 216 >3CGZ-A nrPDB Length = 157 Score = 42.8 bits (99), Expect = 3e-04, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 45/124 (36%), Gaps = 19/124 (15%) Query: 247 HMLFELFKNAMRATVESHESSLTLPPIKIMVALGEEDLSIKMSDRGGGVPLRKIERLFSY 306 ++ + NA + +E ++I ++ L I + D G G+P K +F Sbjct: 52 EVMGNVLDNACKYCLEF---------VEISARQTDDHLHIFVEDDGPGIPHSKRSLVFDR 102 Query: 307 MYSTAPTPQPGTGGTPLAGFGYGLPISRLYAKYFQGDLQL-FSMEGFGTDAVIYLKALST 365 T G G GL ++R + + G + S+ G V++ + T Sbjct: 103 GQRAD---------TLRPGQGVGLAVAREITEQYAGQIIASDSLLGGARMEVVFGRQHPT 153 Query: 366 DSVE 369 E Sbjct: 154 QKEE 157 >1YSR-A nrPDB Length = 150 Score = 38.9 bits (89), Expect = 0.004, Method: Composition-based stats. Identities = 24/129 (18%), Positives = 47/129 (36%), Gaps = 20/129 (15%) Query: 220 PDLEIQEVNATNATQPIHMVYVPSHLYHMLFELFKNAMRATVESHESSLTLPPIKIMVAL 279 PDL++ V + +V +P+ L + NA++ ++L +++ Sbjct: 26 PDLDVSLV----PSPTCIIVGLPAGLRLAVDNAIANAVK----HGGATL----VQLSAVS 73 Query: 280 GEEDLSIKMSDRGGGVPLRKIERLFSYMYSTAPTPQPGTGGTPLAGFGYGLPISRLYAKY 339 + I + D G GVP + + +F +G G GL + A+ Sbjct: 74 SRAGVEIAIDDNGSGVPEGERQVVFERFSR--------GSTASHSGSGLGLALVAQQAQL 125 Query: 340 FQGDLQLFS 348 G L + Sbjct: 126 HGGTASLEN 134 >3JZ3-A nrPDB Length = 222 Score = 37.0 bits (84), Expect = 0.014, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 41/104 (39%), Gaps = 19/104 (18%) Query: 255 NAMRATVESHESSLTLPPIKIMVALGEEDLSIKMSDRGGGVPLRKIERLFSYMYSTAPTP 314 NA+R + + + V L ++ ++ D G GV + R+ Y Sbjct: 128 NAVRYSPQGS---------VVDVTLNADNFIVR--DNGPGVTPEALARIGERFYR----- 171 Query: 315 QPGTGGTPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVI 358 PG T G G GL I + AK +++ + E G +A + Sbjct: 172 PPGQTAT---GSGLGLSIVQRIAKLHGMNVEFGNAEQGGFEAKV 212 >5IDM-A nrPDB Length = 179 Score = 37.0 bits (84), Expect = 0.016, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 9/76 (11%) Query: 285 SIKMSDRGGGVPLRKIERLFSYMYSTAPTPQPGTGGTPLAGFGYGLPISRLYAKYFQGDL 344 I++SD G G+P + ++F ++T P + G G GL K G + Sbjct: 97 FIEVSDDGPGIPPDVMGKIFDPFFTTKPVGE---------GTGLGLATVYGIVKQSDGWI 147 Query: 345 QLFSMEGFGTDAVIYL 360 + S G I+L Sbjct: 148 HVHSRPNEGAAFRIFL 163 >5IDJ-A nrPDB Length = 242 Score = 37.0 bits (84), Expect = 0.016, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 9/76 (11%) Query: 285 SIKMSDRGGGVPLRKIERLFSYMYSTAPTPQPGTGGTPLAGFGYGLPISRLYAKYFQGDL 344 I++SD G G+P + ++F ++T P + G G GL K G + Sbjct: 171 FIEVSDDGPGIPPDVMGKIFDPFFTTKPVGE---------GTGLGLATVYGIVKQSDGWI 221 Query: 345 QLFSMEGFGTDAVIYL 360 + S G I+L Sbjct: 222 HVHSRPNEGAAFRIFL 237 >4XIV-A nrPDB Length = 252 Score = 35.5 bits (80), Expect = 0.046, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 52/137 (37%), Gaps = 27/137 (19%) Query: 249 LFELFKNAMRATVESHESSLTL--PPIKIMV---ALGEEDLSIKMSDRGGGVPLRKIER- 302 L L +NA+ +E E + PPI ++ ++ I++ D G G+ KI R Sbjct: 115 LLHLLRNAIDHGIEPKEERIAKGKPPIGTLILSARHEGNNVVIEVEDDGRGIDKEKIIRK 174 Query: 303 -------------------LFSYMYSTAPTPQPGTGGTPLAGFGYGLPISRLYAKYFQGD 343 + ++++ P + ++G G G+ + + + G Sbjct: 175 AIEKGLIDESKAATLSDQEILNFLF--VPGFSTKEKVSEVSGRGVGMDVVKNVVESLNGS 232 Query: 344 LQLFSMEGFGTDAVIYL 360 + + S + GT I L Sbjct: 233 ISIESEKDKGTKVTIRL 249 >1I5D-A nrPDB Length = 191 Score = 35.5 bits (80), Expect = 0.046, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 52/137 (37%), Gaps = 27/137 (19%) Query: 249 LFELFKNAMRATVESHESSLTL--PPIKIMV---ALGEEDLSIKMSDRGGGVPLRKIER- 302 L L +NA+ +E E + PPI ++ ++ I++ D G G+ KI R Sbjct: 54 LLHLLRNAIDHGIEPKEERIAKGKPPIGTLILSARHEGNNVVIEVEDDGRGIDKEKIIRK 113 Query: 303 -------------------LFSYMYSTAPTPQPGTGGTPLAGFGYGLPISRLYAKYFQGD 343 + ++++ P + ++G G G+ + + + G Sbjct: 114 AIEKGLIDESKAATLSDQEILNFLF--VPGFSTKEKVSEVSGRGVGMDVVKNVVESLNGS 171 Query: 344 LQLFSMEGFGTDAVIYL 360 + + S + GT I L Sbjct: 172 ISIESEKDKGTKVTIRL 188 >1XRE-A nrPDB Length = 217 Score = 34.7 bits (78), Expect = 0.084, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 20/42 (47%) Query: 288 MSDRGGGVPLRKIERLFSYMYSTAPTPQPGTGGTPLAGFGYG 329 MS RGGG P + ++ Y ++T + ++ FG G Sbjct: 99 MSPRGGGEPNGDVAKVIDYYFNTFDNLKDQLSKAAISRFGSG 140 >3JA6-C nrPDB Length = 379 Score = 34.3 bits (77), Expect = 0.086, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 52/137 (37%), Gaps = 27/137 (19%) Query: 249 LFELFKNAMRATVESHESSLTL--PPIKIMV---ALGEEDLSIKMSDRGGGVPLRKIER- 302 L L +NA+ +E E + PPI ++ ++ I++ D G G+ KI R Sbjct: 111 LLHLLRNAIDHGIEPKEERIAKGKPPIGTLILSARHEGNNVVIEVEDDGRGIDKEKIIRK 170 Query: 303 -------------------LFSYMYSTAPTPQPGTGGTPLAGFGYGLPISRLYAKYFQGD 343 + ++++ P + ++G G G+ + + + G Sbjct: 171 AIEKGLIDESKAATLSDQEILNFLF--VPGFSTKEKVSEVSGRGVGMDVVKNVVESLNGS 228 Query: 344 LQLFSMEGFGTDAVIYL 360 + + S + GT I L Sbjct: 229 MGIESEKDKGTKVTIRL 245 >4JPB-A nrPDB Length = 319 Score = 33.1 bits (74), Expect = 0.20, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 51/137 (37%), Gaps = 28/137 (20%) Query: 249 LFELFKNAMRATVESHESSLTL--PPIKIMV---ALGEEDLSIKMSDRGGGVPLRKIER- 302 L L +NA+ +E E + PPI ++ ++ I++ D G G+ KI R Sbjct: 52 LLHLLRNAIDHGIEPKEERIAKGKPPIGTLILSARHEGNNVVIEVEDDGRGIDKEKIIRK 111 Query: 303 -------------------LFSYMYSTAPTPQPGTGGTPLAGFGYGLPISRLYAKYFQGD 343 + +++ P + ++G G G+ + + + G Sbjct: 112 AIEKGLIDESKAATLSDQEILNFL---VPGFSTKEKVSEVSGRGVGMDVVKNVVESLNGS 168 Query: 344 LQLFSMEGFGTDAVIYL 360 + + S + GT I L Sbjct: 169 ISIESEKDKGTKVTIRL 185 >5CPH-A nrPDB Length = 212 Score = 32.4 bits (72), Expect = 0.39, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 35/59 (59%), Gaps = 8/59 (13%) Query: 245 LYHMLFELFKNAMRATVESHESSLTLPPIKIMVALGEEDLSIKMSDRGGGVPLRKIERL 303 L+H+++E+ N++ + + + I++++ E+D IK++D G G+P+ E++ Sbjct: 45 LHHLVWEIVDNSIDEALAGYANQ-----IEVVI---EKDNWIKVTDNGRGIPVDIQEKM 95 >4URM-A nrPDB Length = 231 Score = 32.4 bits (72), Expect = 0.39, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 35/59 (59%), Gaps = 8/59 (13%) Query: 245 LYHMLFELFKNAMRATVESHESSLTLPPIKIMVALGEEDLSIKMSDRGGGVPLRKIERL 303 L+H+++E+ N++ + + + I++++ E+D IK++D G G+P+ E++ Sbjct: 44 LHHLVWEIVDNSIDEALAGYANQ-----IEVVI---EKDNWIKVTDNGRGIPVDIQEKM 94 >5MMP-A nrPDB Length = 234 Score = 31.2 bits (69), Expect = 0.85, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 8/52 (15%) Query: 245 LYHMLFELFKNAMRATVESHESSLTLPPIKIMVALGEEDLSIKMSDRGGGVP 296 L+HM+FE+ NA+ + H K ++ D S+ + D G G+P Sbjct: 50 LHHMVFEVVDNAIDEALAGH--------CKEIIVTIHADNSVSVQDDGRGIP 93 >4PU9-A nrPDB Length = 398 Score = 31.2 bits (69), Expect = 0.85, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 8/52 (15%) Query: 245 LYHMLFELFKNAMRATVESHESSLTLPPIKIMVALGEEDLSIKMSDRGGGVP 296 L+HM+FE+ NA+ + H K ++ D S+ + D G G+P Sbjct: 42 LHHMVFEVVDNAIDEALAGH--------CKEIIVTIHADNSVSVQDDGRGIP 85 >4XEM-A nrPDB Length = 475 Score = 30.8 bits (68), Expect = 1.1, Method: Composition-based stats. Identities = 10/16 (62%), Positives = 12/16 (75%) Query: 328 YGLPISRLYAKYFQGD 343 +G+PI RLY YF GD Sbjct: 146 FGIPIERLYVTYFGGD 161 >1TID-A nrPDB Length = 136 Score = 30.5 bits (67), Expect = 1.2, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 33/78 (42%), Gaps = 6/78 (7%) Query: 243 SHLYHMLFELFKNAMRATVESHESSLTLPPIKIMVALGEEDLSIKMSDRGGGVPLRKIER 302 + + ++ E NA+ + + + + I V + + + + + D G G+P IE Sbjct: 38 TEIKTVVSEAVTNAI---IHGYNNDPN-GIVSISVIIEDGVVHLTVRDEGVGIP--DIEE 91 Query: 303 LFSYMYSTAPTPQPGTGG 320 +++T P + G Sbjct: 92 ARQPLFTTKPELERSGMG 109 >5AA5-C nrPDB Length = 579 Score = 30.5 bits (67), Expect = 1.6, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 25/56 (44%) Query: 305 SYMYSTAPTPQPGTGGTPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVIYL 360 +Y + +P G LA G PI+RL+A G + + ++ G IYL Sbjct: 369 NYTWVMSPRWLDKRTGDHLALDTGGGPIARLWATALAGLVDIGYIKSTGHSVKIYL 424 >4KP4-A nrPDB Length = 236 Score = 30.1 bits (66), Expect = 1.7, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 39/125 (31%), Gaps = 16/125 (12%) Query: 236 IHMVYVPSHLYHMLFELFKNAMRATVESHESSLTLPPIKIMVALGEEDLSIKMSDRGGGV 295 I + P + + + NA R IK+ ++ D G G+ Sbjct: 114 IEVKMHPLSIKRAVANMVVNAARYGN---------GWIKVSSGTEPNRAWFQVEDDGPGI 164 Query: 296 PLRKIERLFSYMYSTAPTPQPGTGGTPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTD 355 + + LF ++G G GL I + G L+L + E G Sbjct: 165 APEQRKHLFQPFVRGDSART-------ISGTGLGLAIVQRIVDNHNGMLELGTSERGGLS 217 Query: 356 AVIYL 360 +L Sbjct: 218 IRAWL 222 >4CTI-A nrPDB Length = 273 Score = 30.1 bits (66), Expect = 1.7, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 39/125 (31%), Gaps = 16/125 (12%) Query: 236 IHMVYVPSHLYHMLFELFKNAMRATVESHESSLTLPPIKIMVALGEEDLSIKMSDRGGGV 295 I + P + + + NA R IK+ ++ D G G+ Sbjct: 151 IEVKMHPLSIKRAVANMVVNAARYGN---------GWIKVSSGTEPNRAWFQVEDDGPGI 201 Query: 296 PLRKIERLFSYMYSTAPTPQPGTGGTPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTD 355 + + LF ++G G GL I + G L+L + E G Sbjct: 202 APEQRKHLFQPFVRGDSART-------ISGTGLGLAIVQRIVDNHNGMLELGTSERGGLS 254 Query: 356 AVIYL 360 +L Sbjct: 255 IRAWL 259 >1BXD-A nrPDB Length = 161 Score = 30.1 bits (66), Expect = 1.7, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 39/125 (31%), Gaps = 16/125 (12%) Query: 236 IHMVYVPSHLYHMLFELFKNAMRATVESHESSLTLPPIKIMVALGEEDLSIKMSDRGGGV 295 I + P + + + NA R IK+ ++ D G G+ Sbjct: 39 IEVKMHPLSIKRAVANMVVNAARYGN---------GWIKVSSGTEPNRAWFQVEDDGPGI 89 Query: 296 PLRKIERLFSYMYSTAPTPQPGTGGTPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTD 355 + + LF ++G G GL I + G L+L + E G Sbjct: 90 APEQRKHLFQPFVRGDSART-------ISGTGLGLAIVQRIVDNHNGMLELGTSERGGLS 142 Query: 356 AVIYL 360 +L Sbjct: 143 IRAWL 147 >4OKD-A nrPDB Length = 840 Score = 29.7 bits (65), Expect = 2.4, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 19/33 (57%) Query: 359 YLKALSTDSVERLPVYNKSAWRHYQTIQEAGDW 391 YLK+L +++E LPV+ + +Y I + + Sbjct: 257 YLKSLGVNAIELLPVFEFNELEYYSQIPGSDQY 289 >3ZKD-A nrPDB Length = 432 Score = 29.7 bits (65), Expect = 2.5, Method: Composition-based stats. Identities = 11/52 (21%), Positives = 29/52 (55%), Gaps = 8/52 (15%) Query: 245 LYHMLFELFKNAMRATVESHESSLTLPPIKIMVALGEEDLSIKMSDRGGGVP 296 L+H+++E+ NA+ + + +++ + + ED ++++D G G+P Sbjct: 47 LHHLIWEVVDNAVDEAMAGYATTVNVVLL--------EDGGVEVADDGRGIP 90 >4KPA-A nrPDB Length = 494 Score = 28.9 bits (63), Expect = 4.7, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 31/63 (49%), Gaps = 8/63 (12%) Query: 103 PEDHRTLSQFTDALVTIR----NRHNDVVPTMAQGVLEYKDTYGDDPVSNQNIQYFLDRF 158 ED + ++ D ++ R + +D++ M G KD +P+ ++NI+Y + F Sbjct: 230 QEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNG----KDPETGEPLDDENIRYQIITF 285 Query: 159 YLS 161 ++ Sbjct: 286 LIA 288 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.309 0.131 0.357 Lambda K H 0.267 0.0401 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 15,548,413 Number of Sequences: 36641 Number of extensions: 619946 Number of successful extensions: 1734 Number of sequences better than 10.0: 45 Number of HSP's better than 10.0 without gapping: 31 Number of HSP's successfully gapped in prelim test: 38 Number of HSP's that attempted gapping in prelim test: 1652 Number of HSP's gapped (non-prelim): 71 length of query: 407 length of database: 10,336,785 effective HSP length: 99 effective length of query: 308 effective length of database: 6,709,326 effective search space: 2066472408 effective search space used: 2066472408 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 60 (27.8 bits)