BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= Q64373
(233 letters)
Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
36,641 sequences; 10,336,785 total letters
Searching..................................................done
Results from round 1
Score E
Sequences producing significant alignments: (bits) Value
4QNQ-A nrPDB 478 e-136
2BZW-A nrPDB 437 e-123
3ZK6-A nrPDB 327 2e-90
2PON-B nrPDB 298 2e-81
4QVX-A nrPDB 276 5e-75
4C5D-A nrPDB 264 2e-71
2O2N-A nrPDB 256 8e-69
4IEH-A nrPDB 195 1e-50
2XA0-A nrPDB 173 7e-44
2W3L-A nrPDB 166 8e-42
4K5A-A nrPDB 159 7e-40
2O2F-A nrPDB 159 1e-39
4CIM-A nrPDB 155 2e-38
5W63-A nrPDB 67 7e-12
6FBX-A nrPDB 66 1e-11
5W62-A nrPDB 66 1e-11
2JCN-A nrPDB 65 2e-11
5W61-A nrPDB 64 6e-11
4BD6-A nrPDB 64 7e-11
5W5Z-A nrPDB 64 7e-11
1WSX-A nrPDB 59 2e-09
6CKV-A nrPDB 59 2e-09
2VOG-A nrPDB 58 4e-09
5KTG-A nrPDB 57 8e-09
5WDD-A nrPDB 56 1e-08
3PK1-A nrPDB 54 5e-08
4WMS-A nrPDB 54 5e-08
3IO9-A nrPDB 54 5e-08
5JSB-A nrPDB 54 7e-08
4U2V-B nrPDB 54 7e-08
5TWA-A nrPDB 52 2e-07
3I1H-A nrPDB 50 7e-07
5UA4-A nrPDB 46 1e-05
2A5Y-A nrPDB 42 3e-04
1TY4-A nrPDB 40 8e-04
3QBR-A nrPDB 39 0.002
4B4S-A nrPDB 35 0.019
4BDU-A nrPDB 33 0.075
1KNW-A nrPDB 32 0.22
5TZP-A nrPDB 32 0.30
1H4S-A nrPDB 32 0.31
5WOS-A nrPDB 30 0.60
4MI8-A nrPDB 30 0.62
2IVE-A nrPDB 30 0.92
5VMN-A nrPDB 29 1.5
6N9M-A nrPDB 29 1.7
4LR8-A nrPDB 28 3.2
6CBN-A nrPDB 27 7.2
4XFJ-A nrPDB 27 7.7
>4QNQ-A nrPDB
Length = 240
Score = 478 bits (1231), Expect = e-136, Method: Compositional matrix adjust.
Identities = 232/233 (99%), Positives = 232/233 (99%)
Query: 1 MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEETEAERETPSAINGNPSWHLA 60
MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEETE ERETPSAINGNPSWHLA
Sbjct: 8 MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEETEPERETPSAINGNPSWHLA 67
Query: 61 DSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY 120
DSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY
Sbjct: 68 DSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY 127
Query: 121 QSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEP 180
QSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEP
Sbjct: 128 QSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEP 187
Query: 181 WIQENGGWDTFVDLYGNNAAAESRKGQERFNRWFLTGMTVAGVVLLGSLFSRK 233
WIQENGGWDTFVDLYGNNAAAESRKGQERFNRWFLTGMTVAGVVLLGSLFSRK
Sbjct: 188 WIQENGGWDTFVDLYGNNAAAESRKGQERFNRWFLTGMTVAGVVLLGSLFSRK 240
>2BZW-A nrPDB
Length = 211
Score = 437 bits (1125), Expect = e-123, Method: Compositional matrix adjust.
Identities = 211/211 (100%), Positives = 211/211 (100%)
Query: 1 MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEETEAERETPSAINGNPSWHLA 60
MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEETEAERETPSAINGNPSWHLA
Sbjct: 1 MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEETEAERETPSAINGNPSWHLA 60
Query: 61 DSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY 120
DSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY
Sbjct: 61 DSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY 120
Query: 121 QSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEP 180
QSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEP
Sbjct: 121 QSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEP 180
Query: 181 WIQENGGWDTFVDLYGNNAAAESRKGQERFN 211
WIQENGGWDTFVDLYGNNAAAESRKGQERFN
Sbjct: 181 WIQENGGWDTFVDLYGNNAAAESRKGQERFN 211
>3ZK6-A nrPDB
Length = 181
Score = 327 bits (838), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 166/210 (79%), Positives = 168/210 (80%), Gaps = 40/210 (19%)
Query: 1 MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEETEAERETPSAINGNPSWHLA 60
MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPE
Sbjct: 5 MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEG-------------------- 44
Query: 61 DSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY 120
IPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY
Sbjct: 45 --------------------IPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY 84
Query: 121 QSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEP 180
QSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIA+WMATYLNDHLEP
Sbjct: 85 QSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIAAWMATYLNDHLEP 144
Query: 181 WIQENGGWDTFVDLYGNNAAAESRKGQERF 210
WIQENGGWDTFV+LYGNNAAAESRKGQER
Sbjct: 145 WIQENGGWDTFVELYGNNAAAESRKGQERL 174
>2PON-B nrPDB
Length = 156
Score = 298 bits (762), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 152/196 (77%), Positives = 155/196 (79%), Gaps = 40/196 (20%)
Query: 1 MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEETEAERETPSAINGNPSWHLA 60
MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPE TE+E
Sbjct: 1 MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEGTESE---------------- 44
Query: 61 DSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY 120
AVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY
Sbjct: 45 ------------------------AVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY 80
Query: 121 QSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEP 180
QSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIA+WMATYLNDHLEP
Sbjct: 81 QSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIAAWMATYLNDHLEP 140
Query: 181 WIQENGGWDTFVDLYG 196
WIQENGGWDTFV+LYG
Sbjct: 141 WIQENGGWDTFVELYG 156
>4QVX-A nrPDB
Length = 167
Score = 276 bits (706), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 146/210 (69%), Positives = 151/210 (71%), Gaps = 50/210 (23%)
Query: 1 MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEETEAERETPSAINGNPSWHLA 60
MSQSNRELVVDFLSYKLSQK
Sbjct: 1 MSQSNRELVVDFLSYKLSQK---------------------------------------- 20
Query: 61 DSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY 120
G+S+S MAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY
Sbjct: 21 ---------GYSAS-GGGGGGGMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY 70
Query: 121 QSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEP 180
QSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDK+MQVLVSRIA+WMATYLNDHLEP
Sbjct: 71 QSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKKMQVLVSRIAAWMATYLNDHLEP 130
Query: 181 WIQENGGWDTFVDLYGNNAAAESRKGQERF 210
WIQENGGW TFV+LYGNNAAAESRKGQER
Sbjct: 131 WIQENGGWATFVELYGNNAAAESRKGQERL 160
>4C5D-A nrPDB
Length = 158
Score = 264 bits (674), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 125/127 (98%), Positives = 127/127 (100%)
Query: 83 MAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDGVNWGRIVA 142
MAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDGVNWGRIVA
Sbjct: 32 MAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDGVNWGRIVA 91
Query: 143 FFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEPWIQENGGWDTFVDLYGNNAAAE 202
FFSFGGALCVESVDKEMQVLVSRIA+WMATYLNDHLEPWIQENGGWDTFV+LYGNNAAAE
Sbjct: 92 FFSFGGALCVESVDKEMQVLVSRIAAWMATYLNDHLEPWIQENGGWDTFVELYGNNAAAE 151
Query: 203 SRKGQER 209
SRKGQER
Sbjct: 152 SRKGQER 158
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 35/42 (83%)
Query: 1 MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEETE 42
MSQSNRELVVDFLSYKLSQKGYSWSQ + V++ EA +E E
Sbjct: 6 MSQSNRELVVDFLSYKLSQKGYSWSQMAAVKQALREAGDEFE 47
>2O2N-A nrPDB
Length = 145
Score = 256 bits (653), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 134/195 (68%), Positives = 137/195 (70%), Gaps = 50/195 (25%)
Query: 2 SQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEETEAERETPSAINGNPSWHLAD 61
SQSNRELVVDFLSYKLSQKGY
Sbjct: 1 SQSNRELVVDFLSYKLSQKGY--------------------------------------- 21
Query: 62 SPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQ 121
S+ MAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQ
Sbjct: 22 -----------SAGGGGGGGGMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQ 70
Query: 122 SFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEPW 181
SFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIA+WMATYLNDHLEPW
Sbjct: 71 SFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIAAWMATYLNDHLEPW 130
Query: 182 IQENGGWDTFVDLYG 196
IQENGGWDTFV+LYG
Sbjct: 131 IQENGGWDTFVELYG 145
>4IEH-A nrPDB
Length = 169
Score = 195 bits (496), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 99/192 (51%), Positives = 117/192 (60%), Gaps = 40/192 (20%)
Query: 5 NRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEETEAERETPSAINGNPSWHLADSPA 64
NRE+V+ ++ YKLSQ+GY W DVEENRTEAPE TE+E
Sbjct: 14 NREIVMKYIHYKLSQRGYEWDAGDDVEENRTEAPEGTESE-------------------- 53
Query: 65 VNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFE 124
V LR+AGD+F RYRR F++++SQLH+TP TA F
Sbjct: 54 --------------------VVHLTLRQAGDDFSRRYRRDFAEMSSQLHLTPFTARGRFA 93
Query: 125 QVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEPWIQE 184
VV ELFRDGVNWGRIVAFF FGG +CVESV++EM LV IA WM YLN HL WIQ+
Sbjct: 94 TVVEELFRDGVNWGRIVAFFEFGGVMCVESVNREMSPLVDNIALWMTEYLNRHLHTWIQD 153
Query: 185 NGGWDTFVDLYG 196
NGGWD FV+LYG
Sbjct: 154 NGGWDAFVELYG 165
>2XA0-A nrPDB
Length = 207
Score = 173 bits (438), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 96/197 (48%), Positives = 119/197 (60%), Gaps = 9/197 (4%)
Query: 5 NRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEETEAERETP-----SAINGNPSWHL 59
NRE+V+ ++ YKLSQ+GY W DV A P A + +P
Sbjct: 11 NREIVMKYIHYKLSQRGYEWDA-GDVGAAPPGAAPAPGIFSSQPGHTPHPAASRDPV--A 67
Query: 60 ADSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTA 119
SP A +++ A +P V LR+AGD+F RYRR F++++SQLH+TP TA
Sbjct: 68 RTSPLQTPAAPGAAAGPALSPVP-PVVHLTLRQAGDDFSRRYRRDFAEMSSQLHLTPFTA 126
Query: 120 YQSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLE 179
F VV ELFRDGVNWGRIVAFF FGG +CVESV++EM LV IA WM YLN HL
Sbjct: 127 RGRFATVVEELFRDGVNWGRIVAFFEFGGVMCVESVNREMSPLVDNIALWMTEYLNRHLH 186
Query: 180 PWIQENGGWDTFVDLYG 196
WIQ+NGGWD FV+LYG
Sbjct: 187 TWIQDNGGWDAFVELYG 203
>2W3L-A nrPDB
Length = 144
Score = 166 bits (420), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 105/192 (54%), Gaps = 53/192 (27%)
Query: 5 NRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEETEAERETPSAINGNPSWHLADSPA 64
NRE+V+ ++ YKLSQ+GY W +D E
Sbjct: 3 NREIVMKYIHYKLSQRGYEWDAGADSE--------------------------------- 29
Query: 65 VNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFE 124
V + LREAGD+F RYRR F++++S LH+TP TA F
Sbjct: 30 --------------------VVHKTLREAGDDFSRRYRRDFAEMSSGLHLTPFTARGRFA 69
Query: 125 QVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEPWIQE 184
VV ELFRDGVNWGRIVAFF FGG +CVESV++EM LV IA WM YLN HL WIQ+
Sbjct: 70 TVVEELFRDGVNWGRIVAFFEFGGVMCVESVNREMSPLVDNIALWMTEYLNRHLHTWIQD 129
Query: 185 NGGWDTFVDLYG 196
NGGWD FV+LYG
Sbjct: 130 NGGWDAFVELYG 141
>4K5A-A nrPDB
Length = 184
Score = 159 bits (403), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 86/204 (42%), Positives = 107/204 (52%), Gaps = 49/204 (24%)
Query: 5 NRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEETEAERETPSAINGNPSWHLADSPA 64
R LV DF+ YKL QKGY P + PA
Sbjct: 21 TRALVADFVGYKLRQKGY---------------------------VCGAGPG----EGPA 49
Query: 65 VNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFE 124
+ + QA+R AGDEFE R+RR FSDL +QLH+TPG+A Q F
Sbjct: 50 AD------------------PLHQAMRAAGDEFETRFRRTFSDLAAQLHVTPGSAQQRFT 91
Query: 125 QVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEPWIQE 184
QV +ELF+ G NWGR+VAFF FG ALC ESV+KEM+VLV ++ WM YL L WI
Sbjct: 92 QVSDELFQGGPNWGRLVAFFVFGAALCAESVNKEMEVLVGQVQEWMVAYLETRLADWIHS 151
Query: 185 NGGWDTFVDLYGNNAAAESRKGQE 208
+GGW F LYG+ A E+R+ +E
Sbjct: 152 SGGWAEFTALYGDGALEEARRLRE 175
>2O2F-A nrPDB
Length = 138
Score = 159 bits (402), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 73/112 (65%), Positives = 85/112 (75%)
Query: 85 AVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDGVNWGRIVAFF 144
V LR+AGD+F RYRR F++++SQLH+TP TA F VV ELFRDGVNWGRIVAFF
Sbjct: 26 VVHLTLRQAGDDFSRRYRRDFAEMSSQLHLTPFTARGRFATVVEELFRDGVNWGRIVAFF 85
Query: 145 SFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEPWIQENGGWDTFVDLYG 196
FGG +CVESV++EM LV IA WM YLN HL WIQ+NGGWD FV+LYG
Sbjct: 86 EFGGVMCVESVNREMSPLVDNIALWMTEYLNRHLHTWIQDNGGWDAFVELYG 137
Score = 34.7 bits (78), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 18/23 (78%)
Query: 4 SNRELVVDFLSYKLSQKGYSWSQ 26
NRE+V+ ++ YKLSQ+GY W +
Sbjct: 3 DNREIVMKYIHYKLSQRGYEWDE 25
>4CIM-A nrPDB
Length = 163
Score = 155 bits (391), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/202 (42%), Positives = 105/202 (51%), Gaps = 51/202 (25%)
Query: 5 NRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEETEAERETPSAINGNPSWHLADSPA 64
R LV DF+ YKL QKGY
Sbjct: 10 TRALVADFVGYKLRQKGY------------------------------------------ 27
Query: 65 VNGA-TGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSF 123
V+GA G + D + QALR GDEFE R+RR FSDL +QLH+TPG+A Q F
Sbjct: 28 VSGAGPGEGPAADP--------LGQALRAIGDEFETRFRRTFSDLAAQLHVTPGSAQQRF 79
Query: 124 EQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEPWIQ 183
QV +ELF+ G NWGR+VAFF FG ALC ESV+KEM+ LV ++ WM YL L WI
Sbjct: 80 TQVSDELFQGGPNWGRLVAFFVFGAALCAESVNKEMEPLVGQVQEWMVEYLETRLADWIH 139
Query: 184 ENGGWDTFVDLYGNNAAAESRK 205
+GGW F LYG+ A E+R+
Sbjct: 140 SSGGWAEFTALYGDGALEEARR 161
>5W63-A nrPDB
Length = 189
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 9/113 (7%)
Query: 88 QALREAGDEFE--LRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDG-VNWGRIVAFF 144
Q L++ GDE + + +R +D S L T + F +V E+F DG NWGR+VA F
Sbjct: 60 QYLQQIGDELDNNVDLQRMLAD--SALQPTK----EVFVKVAREIFSDGKFNWGRVVALF 113
Query: 145 SFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEPWIQENGGWDTFVDLYGN 197
F L +E++ ++ ++ I +W YL +H+ WI+E GGW+ +G
Sbjct: 114 YFASRLVIEALLTKIPDIIRTIINWTLDYLREHVINWIREQGGWEGIQTYFGT 166
>6FBX-A nrPDB
Length = 152
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 61/119 (51%), Gaps = 3/119 (2%)
Query: 82 PMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGT-AYQSFEQVVNELFRDG-VNWGR 139
P + +A+R E E ++R F L+ + T G + + V+ EL DG +NWGR
Sbjct: 31 PPSESAEAMRYLAKEMEQQHRTKFRSLSQEFLDTCGADPSKCLQSVMRELVGDGKMNWGR 90
Query: 140 IVAFFSFGGALCVESVDK-EMQVLVSRIASWMATYLNDHLEPWIQENGGWDTFVDLYGN 197
+V+ F+F G L E + + E R+A +A YL + W+ ENGGW+ F + N
Sbjct: 91 VVSIFTFTGVLASELLSRGENSEGSRRLAETIADYLGGEKQDWLVENGGWEGFCRFFHN 149
>5W62-A nrPDB
Length = 192
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 61/115 (53%), Gaps = 9/115 (7%)
Query: 86 VKQALREAGDEFE--LRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDG-VNWGRIVA 142
+ ++LR GDE + + +R +D+ + + + F +V ++F DG NWGR+VA
Sbjct: 59 LSESLRRIGDELDSNMELQRMIADVDTD------SPREVFFRVAADMFADGNFNWGRVVA 112
Query: 143 FFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEPWIQENGGWDTFVDLYGN 197
F F L ++++ ++ L+ I W +L + L WIQ+ GGW+ + +G
Sbjct: 113 LFYFASKLVLKALSTKVPELIRTIMGWTLDFLRERLLVWIQDQGGWEGLLSYFGT 167
>2JCN-A nrPDB
Length = 172
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 1/113 (0%)
Query: 83 MAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDGVNWGRIVA 142
M V + L GD+ RY F + L T AY+ F ++ LF G+NWGR+VA
Sbjct: 53 MGQVGRQLAIIGDDINRRYDSEFQTMLQHLQPTAENAYEYFTKIATSLFESGINWGRVVA 112
Query: 143 FFSFGGALCVESVDKEMQVLVSRIASWMATYLNDH-LEPWIQENGGWDTFVDL 194
FG L + + + ++ ++ ++ H + WI + GGW ++L
Sbjct: 113 LLGFGYRLALHVYQHGLTGFLGQVTRFVVDFMLHHCIARWIAQRGGWVAALNL 165
>5W61-A nrPDB
Length = 194
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 9/116 (7%)
Query: 86 VKQALREAGDEFE--LRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDG-VNWGRIVA 142
+ ++L+ GDE + + +R + + + + + F +V ++F DG NWGR+VA
Sbjct: 59 LSESLKRIGDELDSNMELQRMIAAVDTD------SPREVFFRVAADMFSDGNFNWGRVVA 112
Query: 143 FFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEPWIQENGGWDTFVDLYGNN 198
F F L ++++ ++ L+ I W +L + L WIQ+ GGWD + +G
Sbjct: 113 LFYFASKLVLKALSTKVPELIRTIMGWTLDFLRERLLGWIQDQGGWDGLLSYFGTG 168
>4BD6-A nrPDB
Length = 174
Score = 63.5 bits (153), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 60/115 (52%), Gaps = 9/115 (7%)
Query: 86 VKQALREAGDEFE--LRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDG-VNWGRIVA 142
+ ++L+ GDE + + +R + + + + + F +V ++F DG NWGR+VA
Sbjct: 59 LSESLKRIGDELDSNMELQRMIAAVDTD------SPREVFFRVAADMFSDGNFNWGRVVA 112
Query: 143 FFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEPWIQENGGWDTFVDLYGN 197
F F L ++++ ++ L+ I W +L + L WIQ+ GGWD + +G
Sbjct: 113 LFYFASKLVLKALSTKVPELIRTIMGWTLDFLRERLLGWIQDQGGWDGLLSYFGT 167
>5W5Z-A nrPDB
Length = 163
Score = 63.5 bits (153), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 9/116 (7%)
Query: 86 VKQALREAGDEFE--LRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDG-VNWGRIVA 142
+ ++L+ GDE + + +R + + + + + F +V ++F DG NWGR+VA
Sbjct: 28 LSESLKRIGDELDSNMELQRMIAAVDTD------SPREVFFRVAADMFSDGNFNWGRVVA 81
Query: 143 FFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEPWIQENGGWDTFVDLYGNN 198
F F L ++++ ++ L+ I W +L + L WIQ+ GGWD + +G
Sbjct: 82 LFYFASKLVLKALSTKVPELIRTIMGWTLDFLRERLLGWIQDQGGWDGLLSYFGTG 137
>1WSX-A nrPDB
Length = 162
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 88 QALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDGV-NWGRIVAFFSF 146
+ LR GD + + AF + +L I +SF +V+ +F+DGV NWGRIV SF
Sbjct: 46 ETLRRVGDGVQRNHETAFQGMLRKLDIKNEGDVKSFSRVMVHVFKDGVTNWGRIVTLISF 105
Query: 147 GG--ALCVESVDKEMQVLVSRIASWMATYLNDHLEPWIQENGGWDTFVDLY 195
G A ++SV++E + +A + L W+ + GWD FV+ +
Sbjct: 106 GAFVAKHLKSVNQES--FIEPLAETITDVLVRTKRDWLVKQRGWDGFVEFF 154
>6CKV-A nrPDB
Length = 158
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 83 MAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGT---AYQSFEQVVNELFRDGVNWGR 139
+A V L GDE E+ + ++ QLHI+ + +F V +F G+ WG+
Sbjct: 44 LAEVAAVLLRLGDELEMIRPSVYRNVARQLHISLQSERVVTDAFLAVAGHIFSAGITWGK 103
Query: 140 IVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEPWIQENGGW 188
+V+ ++ L V++V + +V + + ++ L W++ GGW
Sbjct: 104 VVSLYAVAAGLAVDAVRQAQPAMVHALVDALGEFVRKTLATWLRRRGGW 152
>2VOG-A nrPDB
Length = 157
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 53/83 (63%), Gaps = 5/83 (6%)
Query: 118 TAYQSFEQVVNELFRDGV-NWGRIVAFFSFGGALCVESVDKEMQVLVS---RIASWMATY 173
TA F QV+ + F DG+ NWGRIV F+FGG L + +++ + VS +++S++A +
Sbjct: 71 TARIIFNQVMEKEFEDGIINWGRIVTIFAFGGVLLKKLKQEQIALDVSAYKQVSSFVAEF 130
Query: 174 LNDHLEPWIQENGGW-DTFVDLY 195
+ ++ WI++NGGW D F+ +
Sbjct: 131 IMNNTGEWIRQNGGWEDGFIKKF 153
>5KTG-A nrPDB
Length = 311
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%)
Query: 83 MAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDGVNWGRIVA 142
+ V + L GD+ RY F +L QL T G AY+ F ++ + LF+ G++WGR+VA
Sbjct: 236 LGQVGRQLALIGDDICRRYDTEFQNLLEQLQPTAGNAYELFTKIASSLFKSGISWGRVVA 295
Query: 143 FFSFGGALCV 152
FG L +
Sbjct: 296 LLGFGYRLAL 305
>5WDD-A nrPDB
Length = 168
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 83 MAAVKQALREAGDEFELRYRRAFSDLTSQLHIT---PGTAYQSFEQVVNELFRDGVNWGR 139
+A V L GDE E + ++ QL+I+ +F V ++F G+ WG+
Sbjct: 51 LAEVSAILLRLGDELEYIRPNVYRNIARQLNISLHSETVVTDAFLAVAAQIFTAGITWGK 110
Query: 140 IVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEPWIQENGGW 188
+V+ ++ L V+ V +V I + ++ L W++ GGW
Sbjct: 111 VVSLYAVAAGLAVDCVRHAQPAMVHTIVDCLGEFVRKTLVTWLKRRGGW 159
>3PK1-A nrPDB
Length = 189
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
Query: 88 QALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDGV-NWGRIVAFFSF 146
+ LR GD + + AF + +L I +S +V+ +F DGV NWGRIV SF
Sbjct: 74 ETLRRVGDGVQRNHETAFQGMLRKLDIKNEDDVKSLSRVMIHVFSDGVTNWGRIVTLISF 133
Query: 147 GGALCVESVDKEMQVLVSRIASWMATYLNDHLEPWIQENGGWDTFVDLY 195
G + + + +A + L W+ + GWD FV+ +
Sbjct: 134 GAFVAKHLKTINQESCIEPLAESITDVLVRTKRDWLVKQRGWDGFVEFF 182
>4WMS-A nrPDB
Length = 518
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
Query: 88 QALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDGV-NWGRIVAFFSF 146
+ LR GD + + AF + +L I +S +V+ +F DGV NWGRIV SF
Sbjct: 408 ETLRRVGDGVQRNHETAFQGMLRKLDIKNEDDVKSLSRVMIHVFSDGVTNWGRIVTLISF 467
Query: 147 GGALCVESVDKEMQVLVSRIASWMATYLNDHLEPWIQENGGWDTFVDLY 195
G + + + +A + L W+ + GWD FV+ +
Sbjct: 468 GAFVAKHLKTINQESCIEPLAESITDVLVRTKRDWLVKQRGWDGFVEFF 516
>3IO9-A nrPDB
Length = 162
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
Query: 88 QALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDGV-NWGRIVAFFSF 146
+ LR GD + + AF + +L I +S +V+ +F DGV NWGRIV SF
Sbjct: 46 ETLRRVGDGVQRNHETAFQGMLRKLDIKNEDDVKSLSRVMIHVFSDGVTNWGRIVTLISF 105
Query: 147 GGALCVESVDKEMQVLVSRIASWMATYLNDHLEPWIQENGGWDTFVDLY 195
G + + + +A + L W+ + GWD FV+ +
Sbjct: 106 GAFVAKHLKTINQESCIEPLAESITDVLVRTKRDWLVKQRGWDGFVEFF 154
>5JSB-A nrPDB
Length = 179
Score = 53.5 bits (127), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
Query: 88 QALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDGV-NWGRIVAFFSF 146
+ LR GD + + AF + +L I +S +V+ +F DGV NWGRIV SF
Sbjct: 40 ETLRRVGDGVQRNHETAFQGMLRKLDIKNEDDVKSLSRVMIHVFSDGVTNWGRIVTLISF 99
Query: 147 GGALCVESVDKEMQVLVSRIASWMATYLNDHLEPWIQENGGWDTFVDLY 195
G + + + +A + L W+ + GWD FV+ +
Sbjct: 100 GAFVAKHLKTINQESCIEPLAESITDVLVRTKRDWLVKQRGWDGFVEFF 148
>4U2V-B nrPDB
Length = 315
Score = 53.5 bits (127), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 34/71 (47%)
Query: 83 MAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDGVNWGRIVA 142
M V + L GD+ RY F + L T AY+ F ++ LF G+NWGR+VA
Sbjct: 238 MGQVGRQLAIIGDDINRRYDSEFQTMLQHLQPTAENAYEYFTKIATSLFESGINWGRVVA 297
Query: 143 FFSFGGALCVE 153
FG L +
Sbjct: 298 LLGFGYRLALH 308
>5TWA-A nrPDB
Length = 187
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 37/79 (46%)
Query: 114 ITPGTAYQSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATY 173
+TP F +V F DGV+WGR++AF +F + + + + +W
Sbjct: 97 VTPDNVESEFREVERRTFSDGVHWGRVIAFLAFSMSFAAYVNSRGIDGGAYSVFNWTLRV 156
Query: 174 LNDHLEPWIQENGGWDTFV 192
LND L +IQ GW F+
Sbjct: 157 LNDSLADFIQRENGWRGFI 175
>3I1H-A nrPDB
Length = 161
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
Query: 114 ITPGTAYQSFEQVVNELFRDGV-NWGRIVAFFSFGGALCVESVDKEMQVLV---SRIASW 169
++ TA F QV+ + F DG+ NWGRIV F+F G L + + +++ V I+ +
Sbjct: 72 VSVDTARTLFNQVMEKEFEDGIINWGRIVTIFAFEGILIKKLLRQQIAPDVDTYKEISYF 131
Query: 170 MATYLNDHLEPWIQENGGWD 189
+A ++ ++ WI++NGGW+
Sbjct: 132 VAEFIMNNTGEWIRQNGGWE 151
>5UA4-A nrPDB
Length = 153
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 123 FEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEPWI 182
F VV ELF+D +NWGRI F F + D L S + + ++ +L PW+
Sbjct: 75 FTGVVTELFKDLINWGRICGFIVFSAKMAKYCKDANNH-LESTVITTAYNFMKHNLLPWM 133
Query: 183 QENGGWDTFV 192
+GG + F+
Sbjct: 134 ISHGGQEEFL 143
>2A5Y-A nrPDB
Length = 204
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 55/116 (47%), Gaps = 11/116 (9%)
Query: 88 QALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVN-----ELFRDGVNWGRIVA 142
+ +R G FE ++ F + QL P ++ ++ VV + + +++GR++
Sbjct: 67 EMMRVMGTIFEKKHAENFETFSEQLLAVPRISFSLYQDVVRTVGNAQTDQSPMSYGRLIG 126
Query: 143 FFSFGG---ALCVESVDKEMQVLVSRIASWMATYLNDHLE-PWIQENGGWDTFVDL 194
SFGG A +ESV E+Q V + + + ++ + W + N WD F+ L
Sbjct: 127 LISFGGFVAAKMMESV--ELQGQVRNLFVYTSLFIKTRIRNNWKEHNRSWDDFMTL 180
>1TY4-A nrPDB
Length = 170
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 88 QALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVN-----ELFRDGVNWGRIVA 142
+ +R G FE ++ F QL P ++ ++ VV + + +++GR++
Sbjct: 47 EMMRVMGTIFEKKHAENFETFCEQLLAVPRISFSPYQDVVRTVGNAQTDQCPMSYGRLIG 106
Query: 143 FFSFGGALCVESVDK-EMQVLVSRIASWMATYLNDHLE-PWIQENGGWDTFVDL 194
SFGG + + ++ E+Q V + + + ++ + W + N WD F+ L
Sbjct: 107 LISFGGFVAAKMMESVELQGQVRNLFVYTSLFIKTRIRNNWKEHNRSWDDFMTL 160
>3QBR-A nrPDB
Length = 179
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 123 FEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEPWI 182
+ +++N LF + +NWGRIVA F+F L + + + + Y ++ L+ WI
Sbjct: 106 YLEILNGLF-EKLNWGRIVAMFAFLRILVLRLSKHGHSDAIQMLIKTTSQYSDEKLKNWI 164
Query: 183 QENGGWDTFVDLYG 196
+ GW ++ G
Sbjct: 165 NLHDGWSGLIEFSG 178
>4B4S-A nrPDB
Length = 175
Score = 35.4 bits (80), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 50/134 (37%), Gaps = 27/134 (20%)
Query: 82 PMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRD--GVNWGR 139
P AAV LR A +R FS PG ++ + + + D G WGR
Sbjct: 36 PEAAV---LRSAAARLRQIHRSFFSAYLGY----PGNRFELVALMADSVLSDSPGPTWGR 88
Query: 140 IVAFFSFGGALC--------------VESVDKEMQVLVSRIASWMATYLNDHL----EPW 181
+V +F G L + KE + V+R + + L+ L W
Sbjct: 89 VVTLVTFAGTLLERGPLVTARWKKWGFQPRLKEQEGDVARDSQRLVALLSSRLMGQHRAW 148
Query: 182 IQENGGWDTFVDLY 195
+Q GGWD F +
Sbjct: 149 LQAQGGWDGFSHFF 162
>4BDU-A nrPDB
Length = 311
Score = 33.5 bits (75), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 86 VKQALREAGDEFE--LRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDG-VNWGRIVA 142
+ ++L+ GDE + + +R + + + + + F +V ++F DG NWGR+VA
Sbjct: 242 LSESLKRIGDELDSNMELQRMIAAVDTD------SPREVFFRVAADMFSDGNFNWGRVVA 295
Query: 143 FFSFGGALCVESV 155
F F L ++++
Sbjct: 296 LFYFASKLVLKAL 308
>1KNW-A nrPDB
Length = 425
Score = 32.0 bits (71), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 6/54 (11%)
Query: 111 QLHITPGTAYQSFEQVVNELFRDGVNWGRIVAFFSFGGALCV------ESVDKE 158
+HI G Y EQV + R + +G+ + S GG L V E+VD E
Sbjct: 189 HMHIGSGVDYAHLEQVCGAMVRQVIEFGQDLQAISAGGGLSVPYQQGEEAVDTE 242
>5TZP-A nrPDB
Length = 148
Score = 31.6 bits (70), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 16/65 (24%)
Query: 84 AAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDGVNWGRIVAF 143
AA K ++ +EF++ R F +V ++ D +NWGRI+
Sbjct: 51 AACKSVIKTNYNEFDIIISRNID----------------FNVIVTQVLEDKINWGRIITI 94
Query: 144 FSFGG 148
+F
Sbjct: 95 IAFCA 99
>1H4S-A nrPDB
Length = 477
Score = 31.6 bits (70), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 72 SSSLDAREVIPMAAVKQALREAGDEF-ELRYRRAFSDLTSQLHITPGTAYQSFEQVVNEL 130
+S L +E +P+AA+ +AL D F E YRRA + + H Y++F++ V E
Sbjct: 363 ASRLGGKETLPLAALPEALPGKLDAFHEELYRRALA--FREDHTRKVDTYEAFKEAVQEG 420
Query: 131 FRDGVNWG 138
F + G
Sbjct: 421 FALAFHCG 428
>5WOS-A nrPDB
Length = 148
Score = 30.4 bits (67), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 13/65 (20%), Positives = 28/65 (43%)
Query: 125 QVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEPWIQE 184
++V + D + WGR+++ +FG + +K +V + + L W+ +
Sbjct: 80 EIVYDTIHDKITWGRVISIIAFGAYVTKVFKEKGRDNVVDLMPDIITESLLSRCRSWLSD 139
Query: 185 NGGWD 189
WD
Sbjct: 140 QNCWD 144
>4MI8-A nrPDB
Length = 143
Score = 30.4 bits (67), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 11/73 (15%)
Query: 121 QSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATY--LNDHL 178
+ ++ LF D +N GRIV FF G +C E VL SW + LND +
Sbjct: 70 RDLSKLFTSLFVDVINSGRIVGFFDVGRYVCEE-------VLCP--GSWTEDHELLNDCM 120
Query: 179 EPWIQENGGWDTF 191
+ EN + F
Sbjct: 121 THFFIENNLMNHF 133
>2IVE-A nrPDB
Length = 478
Score = 30.0 bits (66), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 13/51 (25%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 151 CVESVDKEMQVLVSRIASWM--ATYLNDHLEPWIQENGGWDTFVDLYGNNA 199
+ + D +QVL+ +A+ + A ++ +E +E+GGW ++ +G A
Sbjct: 229 ALSTFDGGLQVLIDALAASLGDAAHVGARVEGLAREDGGWRLIIEEHGRRA 279
>5VMN-A nrPDB
Length = 132
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Query: 125 QVVNELFRDG-VNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYL-NDHLEPWI 182
++ N + DG +NWGRI+ +S + + ++I + + D + WI
Sbjct: 55 EIGNNIVSDGNLNWGRILILLGISQLYFTKSESESER---TQITEQLERFFRQDAISNWI 111
Query: 183 QENGGWDTFVDL 194
NGGW T L
Sbjct: 112 ASNGGWVTCASL 123
>6N9M-A nrPDB
Length = 341
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 12/90 (13%)
Query: 73 SSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFR 132
+SLDA + ++ A R ELR+ + + QL I + V + R
Sbjct: 71 ASLDACRRVAFENIEDAARNGLHYVELRFSPGYMAMAHQLPIA------GVVEAVIDGVR 124
Query: 133 DGVNW----GRIVAFFS--FGGALCVESVD 156
DG N R++ S FG A C++ +D
Sbjct: 125 DGCNTFGVEARLIGIMSRTFGEAACLQELD 154
>4LR8-A nrPDB
Length = 416
Score = 28.1 bits (61), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Query: 71 HSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDL 108
H + RE +P+ A +++E G E L R+ F+D+
Sbjct: 356 HPGTDHTREYVPLLAYSPSMKEGGQELPL--RQTFADI 391
>6CBN-A nrPDB
Length = 438
Score = 26.9 bits (58), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 87 KQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNEL 130
++A+REAGD F R+A D + + I + F EL
Sbjct: 304 QRAVREAGDRFLRHARKALDDASLPVEIAGDGTFFQFVPATEEL 347
>4XFJ-A nrPDB
Length = 408
Score = 26.9 bits (58), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 9/83 (10%)
Query: 56 SWHLADSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDE----FELRYRRAFSDLTSQ 111
+W D V G S+D R V P+ A+++ R G++ ++ R + +
Sbjct: 219 NWSTPDEVIVGFEQGVPVSIDGRSVTPLQAIEELNRRGGEQGVGRLDVVEDRLVGIKSRE 278
Query: 112 LHITPG-----TAYQSFEQVVNE 129
++ PG TA+ E V E
Sbjct: 279 IYEAPGAMVLITAHTELEHVTLE 301
Searching..................................................done
Results from round 2
Score E
Sequences producing significant alignments: (bits) Value
Sequences used in model and found again:
4QNQ-A nrPDB 343 4e-95
2BZW-A nrPDB 299 6e-82
3ZK6-A nrPDB 240 3e-64
2PON-B nrPDB 215 1e-56
2XA0-A nrPDB 211 2e-55
4QVX-A nrPDB 209 7e-55
4IEH-A nrPDB 202 1e-52
4C5D-A nrPDB 192 1e-49
2O2N-A nrPDB 188 2e-48
2W3L-A nrPDB 181 2e-46
4CIM-A nrPDB 169 7e-43
4K5A-A nrPDB 168 2e-42
2O2F-A nrPDB 164 3e-41
2JCN-A nrPDB 133 9e-32
4WMS-A nrPDB 130 4e-31
3PK1-A nrPDB 127 4e-30
1WSX-A nrPDB 126 7e-30
5JSB-A nrPDB 125 2e-29
3IO9-A nrPDB 124 3e-29
6FBX-A nrPDB 123 5e-29
5WDD-A nrPDB 122 2e-28
6CKV-A nrPDB 118 3e-27
1TY4-A nrPDB 117 3e-27
5W63-A nrPDB 116 8e-27
5W62-A nrPDB 115 1e-26
5W61-A nrPDB 115 2e-26
2A5Y-A nrPDB 113 7e-26
4BD6-A nrPDB 113 7e-26
5W5Z-A nrPDB 113 8e-26
4U2V-B nrPDB 103 9e-23
5KTG-A nrPDB 100 9e-22
3I1H-A nrPDB 97 5e-21
2VOG-A nrPDB 97 6e-21
5TWA-A nrPDB 91 4e-19
3QBR-A nrPDB 90 6e-19
5UA4-A nrPDB 84 5e-17
Sequences not found previously or not previously below threshold:
4BDU-A nrPDB 66 1e-11
4B4S-A nrPDB 57 8e-09
5WOS-A nrPDB 53 1e-07
5TZP-A nrPDB 50 1e-06
1K3K-A nrPDB 44 5e-05
2KUA-A nrPDB 44 6e-05
5VMN-A nrPDB 40 7e-04
4MI8-A nrPDB 36 0.016
2XPX-A nrPDB 32 0.17
2Z1S-A nrPDB 30 0.98
4QJ3-A nrPDB 30 1.2
4EO9-A nrPDB 30 1.2
3IT4-B nrPDB 29 1.6
3GKQ-A nrPDB 29 2.0
1RII-A nrPDB 29 2.1
5HY2-A nrPDB 28 3.5
3PUG-A nrPDB 28 4.6
>4QNQ-A nrPDB
Length = 240
Score = 343 bits (879), Expect = 4e-95, Method: Composition-based stats.
Identities = 232/233 (99%), Positives = 232/233 (99%)
Query: 1 MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEETEAERETPSAINGNPSWHLA 60
MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEETE ERETPSAINGNPSWHLA
Sbjct: 8 MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEETEPERETPSAINGNPSWHLA 67
Query: 61 DSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY 120
DSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY
Sbjct: 68 DSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY 127
Query: 121 QSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEP 180
QSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEP
Sbjct: 128 QSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEP 187
Query: 181 WIQENGGWDTFVDLYGNNAAAESRKGQERFNRWFLTGMTVAGVVLLGSLFSRK 233
WIQENGGWDTFVDLYGNNAAAESRKGQERFNRWFLTGMTVAGVVLLGSLFSRK
Sbjct: 188 WIQENGGWDTFVDLYGNNAAAESRKGQERFNRWFLTGMTVAGVVLLGSLFSRK 240
>2BZW-A nrPDB
Length = 211
Score = 299 bits (765), Expect = 6e-82, Method: Composition-based stats.
Identities = 211/211 (100%), Positives = 211/211 (100%)
Query: 1 MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEETEAERETPSAINGNPSWHLA 60
MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEETEAERETPSAINGNPSWHLA
Sbjct: 1 MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEETEAERETPSAINGNPSWHLA 60
Query: 61 DSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY 120
DSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY
Sbjct: 61 DSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY 120
Query: 121 QSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEP 180
QSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEP
Sbjct: 121 QSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEP 180
Query: 181 WIQENGGWDTFVDLYGNNAAAESRKGQERFN 211
WIQENGGWDTFVDLYGNNAAAESRKGQERFN
Sbjct: 181 WIQENGGWDTFVDLYGNNAAAESRKGQERFN 211
>3ZK6-A nrPDB
Length = 181
Score = 240 bits (612), Expect = 3e-64, Method: Composition-based stats.
Identities = 166/210 (79%), Positives = 168/210 (80%), Gaps = 40/210 (19%)
Query: 1 MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEETEAERETPSAINGNPSWHLA 60
MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPE
Sbjct: 5 MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEG-------------------- 44
Query: 61 DSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY 120
IPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY
Sbjct: 45 --------------------IPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY 84
Query: 121 QSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEP 180
QSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIA+WMATYLNDHLEP
Sbjct: 85 QSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIAAWMATYLNDHLEP 144
Query: 181 WIQENGGWDTFVDLYGNNAAAESRKGQERF 210
WIQENGGWDTFV+LYGNNAAAESRKGQER
Sbjct: 145 WIQENGGWDTFVELYGNNAAAESRKGQERL 174
>2PON-B nrPDB
Length = 156
Score = 215 bits (546), Expect = 1e-56, Method: Composition-based stats.
Identities = 152/196 (77%), Positives = 155/196 (79%), Gaps = 40/196 (20%)
Query: 1 MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEETEAERETPSAINGNPSWHLA 60
MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPE TE+E
Sbjct: 1 MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEGTESE---------------- 44
Query: 61 DSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY 120
AVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY
Sbjct: 45 ------------------------AVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY 80
Query: 121 QSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEP 180
QSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIA+WMATYLNDHLEP
Sbjct: 81 QSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIAAWMATYLNDHLEP 140
Query: 181 WIQENGGWDTFVDLYG 196
WIQENGGWDTFV+LYG
Sbjct: 141 WIQENGGWDTFVELYG 156
>2XA0-A nrPDB
Length = 207
Score = 211 bits (537), Expect = 2e-55, Method: Composition-based stats.
Identities = 96/197 (48%), Positives = 119/197 (60%), Gaps = 9/197 (4%)
Query: 5 NRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEETEAERETP-----SAINGNPSWHL 59
NRE+V+ ++ YKLSQ+GY W DV A P A + +P
Sbjct: 11 NREIVMKYIHYKLSQRGYEWDAG-DVGAAPPGAAPAPGIFSSQPGHTPHPAASRDPV--A 67
Query: 60 ADSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTA 119
SP A +++ A +P V LR+AGD+F RYRR F++++SQLH+TP TA
Sbjct: 68 RTSPLQTPAAPGAAAGPALSPVPP-VVHLTLRQAGDDFSRRYRRDFAEMSSQLHLTPFTA 126
Query: 120 YQSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLE 179
F VV ELFRDGVNWGRIVAFF FGG +CVESV++EM LV IA WM YLN HL
Sbjct: 127 RGRFATVVEELFRDGVNWGRIVAFFEFGGVMCVESVNREMSPLVDNIALWMTEYLNRHLH 186
Query: 180 PWIQENGGWDTFVDLYG 196
WIQ+NGGWD FV+LYG
Sbjct: 187 TWIQDNGGWDAFVELYG 203
>4QVX-A nrPDB
Length = 167
Score = 209 bits (532), Expect = 7e-55, Method: Composition-based stats.
Identities = 146/210 (69%), Positives = 150/210 (71%), Gaps = 50/210 (23%)
Query: 1 MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEETEAERETPSAINGNPSWHLA 60
MSQSNRELVVDFLSYKLSQKGYS
Sbjct: 1 MSQSNRELVVDFLSYKLSQKGYS------------------------------------- 23
Query: 61 DSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY 120
+ MAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY
Sbjct: 24 -------------ASGGGGGGGMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY 70
Query: 121 QSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEP 180
QSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDK+MQVLVSRIA+WMATYLNDHLEP
Sbjct: 71 QSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKKMQVLVSRIAAWMATYLNDHLEP 130
Query: 181 WIQENGGWDTFVDLYGNNAAAESRKGQERF 210
WIQENGGW TFV+LYGNNAAAESRKGQER
Sbjct: 131 WIQENGGWATFVELYGNNAAAESRKGQERL 160
>4IEH-A nrPDB
Length = 169
Score = 202 bits (513), Expect = 1e-52, Method: Composition-based stats.
Identities = 99/192 (51%), Positives = 117/192 (60%), Gaps = 40/192 (20%)
Query: 5 NRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEETEAERETPSAINGNPSWHLADSPA 64
NRE+V+ ++ YKLSQ+GY W DVEENRTEAPE TE+E
Sbjct: 14 NREIVMKYIHYKLSQRGYEWDAGDDVEENRTEAPEGTESE-------------------- 53
Query: 65 VNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFE 124
V LR+AGD+F RYRR F++++SQLH+TP TA F
Sbjct: 54 --------------------VVHLTLRQAGDDFSRRYRRDFAEMSSQLHLTPFTARGRFA 93
Query: 125 QVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEPWIQE 184
VV ELFRDGVNWGRIVAFF FGG +CVESV++EM LV IA WM YLN HL WIQ+
Sbjct: 94 TVVEELFRDGVNWGRIVAFFEFGGVMCVESVNREMSPLVDNIALWMTEYLNRHLHTWIQD 153
Query: 185 NGGWDTFVDLYG 196
NGGWD FV+LYG
Sbjct: 154 NGGWDAFVELYG 165
>4C5D-A nrPDB
Length = 158
Score = 192 bits (488), Expect = 1e-49, Method: Composition-based stats.
Identities = 126/139 (90%), Positives = 129/139 (92%)
Query: 71 HSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNEL 130
+ S MAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNEL
Sbjct: 20 YKLSQKGYSWSQMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNEL 79
Query: 131 FRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEPWIQENGGWDT 190
FRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIA+WMATYLNDHLEPWIQENGGWDT
Sbjct: 80 FRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIAAWMATYLNDHLEPWIQENGGWDT 139
Query: 191 FVDLYGNNAAAESRKGQER 209
FV+LYGNNAAAESRKGQER
Sbjct: 140 FVELYGNNAAAESRKGQER 158
>2O2N-A nrPDB
Length = 145
Score = 188 bits (477), Expect = 2e-48, Method: Composition-based stats.
Identities = 134/195 (68%), Positives = 137/195 (70%), Gaps = 50/195 (25%)
Query: 2 SQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEETEAERETPSAINGNPSWHLAD 61
SQSNRELVVDFLSYKLSQKGYS
Sbjct: 1 SQSNRELVVDFLSYKLSQKGYS-------------------------------------- 22
Query: 62 SPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQ 121
+ MAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQ
Sbjct: 23 ------------AGGGGGGGGMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQ 70
Query: 122 SFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEPW 181
SFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIA+WMATYLNDHLEPW
Sbjct: 71 SFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIAAWMATYLNDHLEPW 130
Query: 182 IQENGGWDTFVDLYG 196
IQENGGWDTFV+LYG
Sbjct: 131 IQENGGWDTFVELYG 145
>2W3L-A nrPDB
Length = 144
Score = 181 bits (459), Expect = 2e-46, Method: Composition-based stats.
Identities = 87/192 (45%), Positives = 105/192 (54%), Gaps = 53/192 (27%)
Query: 5 NRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEETEAERETPSAINGNPSWHLADSPA 64
NRE+V+ ++ YKLSQ+GY W +D E
Sbjct: 3 NREIVMKYIHYKLSQRGYEWDAGADSE--------------------------------- 29
Query: 65 VNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFE 124
V + LREAGD+F RYRR F++++S LH+TP TA F
Sbjct: 30 --------------------VVHKTLREAGDDFSRRYRRDFAEMSSGLHLTPFTARGRFA 69
Query: 125 QVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEPWIQE 184
VV ELFRDGVNWGRIVAFF FGG +CVESV++EM LV IA WM YLN HL WIQ+
Sbjct: 70 TVVEELFRDGVNWGRIVAFFEFGGVMCVESVNREMSPLVDNIALWMTEYLNRHLHTWIQD 129
Query: 185 NGGWDTFVDLYG 196
NGGWD FV+LYG
Sbjct: 130 NGGWDAFVELYG 141
>4CIM-A nrPDB
Length = 163
Score = 169 bits (428), Expect = 7e-43, Method: Composition-based stats.
Identities = 83/203 (40%), Positives = 102/203 (50%), Gaps = 49/203 (24%)
Query: 5 NRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEETEAERETPSAINGNPSWHLADSPA 64
R LV DF+ YKL QKGY
Sbjct: 10 TRALVADFVGYKLRQKGYVSGAG------------------------------------- 32
Query: 65 VNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFE 124
G + D + QALR GDEFE R+RR FSDL +QLH+TPG+A Q F
Sbjct: 33 ----PGEGPAADP--------LGQALRAIGDEFETRFRRTFSDLAAQLHVTPGSAQQRFT 80
Query: 125 QVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEPWIQE 184
QV +ELF+ G NWGR+VAFF FG ALC ESV+KEM+ LV ++ WM YL L WI
Sbjct: 81 QVSDELFQGGPNWGRLVAFFVFGAALCAESVNKEMEPLVGQVQEWMVEYLETRLADWIHS 140
Query: 185 NGGWDTFVDLYGNNAAAESRKGQ 207
+GGW F LYG+ A E+R+ +
Sbjct: 141 SGGWAEFTALYGDGALEEARRLR 163
>4K5A-A nrPDB
Length = 184
Score = 168 bits (424), Expect = 2e-42, Method: Composition-based stats.
Identities = 86/204 (42%), Positives = 105/204 (51%), Gaps = 49/204 (24%)
Query: 5 NRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEETEAERETPSAINGNPSWHLADSPA 64
R LV DF+ YKL QKGY P A P
Sbjct: 21 TRALVADFVGYKLRQKGY---------------------------VCGAGPGEGPAADP- 52
Query: 65 VNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFE 124
+ QA+R AGDEFE R+RR FSDL +QLH+TPG+A Q F
Sbjct: 53 ---------------------LHQAMRAAGDEFETRFRRTFSDLAAQLHVTPGSAQQRFT 91
Query: 125 QVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEPWIQE 184
QV +ELF+ G NWGR+VAFF FG ALC ESV+KEM+VLV ++ WM YL L WI
Sbjct: 92 QVSDELFQGGPNWGRLVAFFVFGAALCAESVNKEMEVLVGQVQEWMVAYLETRLADWIHS 151
Query: 185 NGGWDTFVDLYGNNAAAESRKGQE 208
+GGW F LYG+ A E+R+ +E
Sbjct: 152 SGGWAEFTALYGDGALEEARRLRE 175
>2O2F-A nrPDB
Length = 138
Score = 164 bits (414), Expect = 3e-41, Method: Composition-based stats.
Identities = 73/112 (65%), Positives = 85/112 (75%)
Query: 85 AVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDGVNWGRIVAFF 144
V LR+AGD+F RYRR F++++SQLH+TP TA F VV ELFRDGVNWGRIVAFF
Sbjct: 26 VVHLTLRQAGDDFSRRYRRDFAEMSSQLHLTPFTARGRFATVVEELFRDGVNWGRIVAFF 85
Query: 145 SFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEPWIQENGGWDTFVDLYG 196
FGG +CVESV++EM LV IA WM YLN HL WIQ+NGGWD FV+LYG
Sbjct: 86 EFGGVMCVESVNREMSPLVDNIALWMTEYLNRHLHTWIQDNGGWDAFVELYG 137
>2JCN-A nrPDB
Length = 172
Score = 133 bits (333), Expect = 9e-32, Method: Composition-based stats.
Identities = 36/135 (26%), Positives = 59/135 (43%), Gaps = 2/135 (1%)
Query: 65 VNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFE 124
A +L + M V + L GD+ RY F + L T AY+ F
Sbjct: 35 AAPADPEMVTLPLQPSSTMGQVGRQLAIIGDDINRRYDSEFQTMLQHLQPTAENAYEYFT 94
Query: 125 QVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDH-LEPWIQ 183
++ LF G+NWGR+VA FG L + + + ++ ++ ++ H + WI
Sbjct: 95 KIATSLFESGINWGRVVALLGFGYRLALHVYQHGLTGFLGQVTRFVVDFMLHHCIARWIA 154
Query: 184 ENGGWDTFVDLYGNN 198
+ GGW ++L GN
Sbjct: 155 QRGGWVAALNL-GNG 168
>4WMS-A nrPDB
Length = 518
Score = 130 bits (327), Expect = 4e-31, Method: Composition-based stats.
Identities = 41/168 (24%), Positives = 71/168 (42%), Gaps = 9/168 (5%)
Query: 30 VEENRTEAPEETEAERETPSAINGNPSWHLADSPAVNGATGHSSSLDAREVIPMAAVKQA 89
V+E +A +E R++ I+ + A + A +S +R+ + +
Sbjct: 358 VDEALKDAQTGSELYRQSLEIISR--YLREQATGAADTAPMGASGATSRKAL------ET 409
Query: 90 LREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDGV-NWGRIVAFFSFGG 148
LR GD + + AF + +L I +S +V+ +F DGV NWGRIV SFG
Sbjct: 410 LRRVGDGVQRNHETAFQGMLRKLDIKNEDDVKSLSRVMIHVFSDGVTNWGRIVTLISFGA 469
Query: 149 ALCVESVDKEMQVLVSRIASWMATYLNDHLEPWIQENGGWDTFVDLYG 196
+ + + +A + L W+ + GWD FV+ +
Sbjct: 470 FVAKHLKTINQESCIEPLAESITDVLVRTKRDWLVKQRGWDGFVEFFH 517
>3PK1-A nrPDB
Length = 189
Score = 127 bits (318), Expect = 4e-30, Method: Composition-based stats.
Identities = 35/171 (20%), Positives = 61/171 (35%), Gaps = 8/171 (4%)
Query: 39 EETEAERETPSAINGNPSWHLADSPAVNGATGHSSSLDAREVIPMAAVK-------QALR 91
+ + + + S + + A++ PM + LR
Sbjct: 18 DSPDLGTDDDDKAMADIGSLYRQSLEIISRYLREQATGAKDTKPMGRSGATSRKALETLR 77
Query: 92 EAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDGV-NWGRIVAFFSFGGAL 150
GD + + AF + +L I +S +V+ +F DGV NWGRIV SFG +
Sbjct: 78 RVGDGVQRNHETAFQGMLRKLDIKNEDDVKSLSRVMIHVFSDGVTNWGRIVTLISFGAFV 137
Query: 151 CVESVDKEMQVLVSRIASWMATYLNDHLEPWIQENGGWDTFVDLYGNNAAA 201
+ + +A + L W+ + GWD FV+ +
Sbjct: 138 AKHLKTINQESCIEPLAESITDVLVRTKRDWLVKQRGWDGFVEFFHVEDLE 188
>1WSX-A nrPDB
Length = 162
Score = 126 bits (316), Expect = 7e-30, Method: Composition-based stats.
Identities = 37/136 (27%), Positives = 56/136 (41%), Gaps = 2/136 (1%)
Query: 68 ATGHSSSLDAREVIPMAAVK-QALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQV 126
ATG S E + LR GD + + AF + +L I +SF +V
Sbjct: 25 ATGSKDSKPLGEAGAAGRRALETLRRVGDGVQRNHETAFQGMLRKLDIKNEGDVKSFSRV 84
Query: 127 VNELFRDGV-NWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEPWIQEN 185
+ +F+DGV NWGRIV SFG + + + +A + L W+ +
Sbjct: 85 MVHVFKDGVTNWGRIVTLISFGAFVAKHLKSVNQESFIEPLAETITDVLVRTKRDWLVKQ 144
Query: 186 GGWDTFVDLYGNNAAA 201
GWD FV+ +
Sbjct: 145 RGWDGFVEFFHVQDLE 160
>5JSB-A nrPDB
Length = 179
Score = 125 bits (312), Expect = 2e-29, Method: Composition-based stats.
Identities = 34/136 (25%), Positives = 55/136 (40%), Gaps = 8/136 (5%)
Query: 74 SLDAREVIPMAAVK-------QALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQV 126
+ A++ PM + LR GD + + AF + +L I +S +V
Sbjct: 19 ATGAKDTKPMGRSGATSRKALETLRRVGDGVQRNHETAFQGMLRKLDIKNEDDVKSLSRV 78
Query: 127 VNELFRDGV-NWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEPWIQEN 185
+ +F DGV NWGRIV SFG + + + +A + L W+ +
Sbjct: 79 MIHVFSDGVTNWGRIVTLISFGAFVAKHLKTINQESCIEPLAESITDVLVRTKRDWLVKQ 138
Query: 186 GGWDTFVDLYGNNAAA 201
GWD FV+ +
Sbjct: 139 RGWDGFVEFFHVEDLE 154
>3IO9-A nrPDB
Length = 162
Score = 124 bits (311), Expect = 3e-29, Method: Composition-based stats.
Identities = 36/136 (26%), Positives = 54/136 (39%), Gaps = 2/136 (1%)
Query: 68 ATGHSSSLDAREVIPMAAVK-QALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQV 126
ATG S E + LR GD + + AF + +L I +S +V
Sbjct: 25 ATGSKDSKPLGEAGAAGRRALETLRRVGDGVQRNHETAFQGMLRKLDIKNEDDVKSLSRV 84
Query: 127 VNELFRDGV-NWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEPWIQEN 185
+ +F DGV NWGRIV SFG + + + +A + L W+ +
Sbjct: 85 MIHVFSDGVTNWGRIVTLISFGAFVAKHLKTINQESCIEPLAESITDVLVRTKRDWLVKQ 144
Query: 186 GGWDTFVDLYGNNAAA 201
GWD FV+ +
Sbjct: 145 RGWDGFVEFFHVEDLE 160
>6FBX-A nrPDB
Length = 152
Score = 123 bits (309), Expect = 5e-29, Method: Composition-based stats.
Identities = 41/133 (30%), Positives = 65/133 (48%), Gaps = 3/133 (2%)
Query: 68 ATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGT-AYQSFEQV 126
A + S + P + +A+R E E ++R F L+ + T G + + V
Sbjct: 17 AEDYISFCSGIQQTPPSESAEAMRYLAKEMEQQHRTKFRSLSQEFLDTCGADPSKCLQSV 76
Query: 127 VNELFRDG-VNWGRIVAFFSFGGALCVESVDK-EMQVLVSRIASWMATYLNDHLEPWIQE 184
+ EL DG +NWGR+V+ F+F G L E + + E R+A +A YL + W+ E
Sbjct: 77 MRELVGDGKMNWGRVVSIFTFTGVLASELLSRGENSEGSRRLAETIADYLGGEKQDWLVE 136
Query: 185 NGGWDTFVDLYGN 197
NGGW+ F + N
Sbjct: 137 NGGWEGFCRFFHN 149
>5WDD-A nrPDB
Length = 168
Score = 122 bits (305), Expect = 2e-28, Method: Composition-based stats.
Identities = 27/120 (22%), Positives = 49/120 (40%), Gaps = 3/120 (2%)
Query: 77 AREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHIT---PGTAYQSFEQVVNELFRD 133
+A V L GDE E + ++ QL+I+ +F V ++F
Sbjct: 45 PVPGGKLAEVSAILLRLGDELEYIRPNVYRNIARQLNISLHSETVVTDAFLAVAAQIFTA 104
Query: 134 GVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEPWIQENGGWDTFVD 193
G+ WG++V+ ++ L V+ V +V I + ++ L W++ GGW
Sbjct: 105 GITWGKVVSLYAVAAGLAVDCVRHAQPAMVHTIVDCLGEFVRKTLVTWLKRRGGWADITK 164
>6CKV-A nrPDB
Length = 158
Score = 118 bits (294), Expect = 3e-27, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 56/130 (43%), Gaps = 3/130 (2%)
Query: 67 GATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHIT---PGTAYQSF 123
G + + A +A V L GDE E+ + ++ QLHI+ +F
Sbjct: 28 GLSWSAPERAAPVPGRLAEVAAVLLRLGDELEMIRPSVYRNVARQLHISLQSERVVTDAF 87
Query: 124 EQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEPWIQ 183
V +F G+ WG++V+ ++ L V++V + +V + + ++ L W++
Sbjct: 88 LAVAGHIFSAGITWGKVVSLYAVAAGLAVDAVRQAQPAMVHALVDALGEFVRKTLATWLR 147
Query: 184 ENGGWDTFVD 193
GGW +
Sbjct: 148 RRGGWTDVLK 157
>1TY4-A nrPDB
Length = 170
Score = 117 bits (293), Expect = 3e-27, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 54/127 (42%), Gaps = 7/127 (5%)
Query: 75 LDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVN-----E 129
+ + +R G FE ++ F QL P ++ ++ VV +
Sbjct: 34 GAPGLPCGVQPEHEMMRVMGTIFEKKHAENFETFCEQLLAVPRISFSPYQDVVRTVGNAQ 93
Query: 130 LFRDGVNWGRIVAFFSFGGALCVESVDK-EMQVLVSRIASWMATYLNDHLE-PWIQENGG 187
+ +++GR++ SFGG + + ++ E+Q V + + + ++ + W + N
Sbjct: 94 TDQCPMSYGRLIGLISFGGFVAAKMMESVELQGQVRNLFVYTSLFIKTRIRNNWKEHNRS 153
Query: 188 WDTFVDL 194
WD F+ L
Sbjct: 154 WDDFMTL 160
>5W63-A nrPDB
Length = 189
Score = 116 bits (290), Expect = 8e-27, Method: Composition-based stats.
Identities = 44/168 (26%), Positives = 73/168 (43%), Gaps = 22/168 (13%)
Query: 60 ADSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFE--LRYRRAFSDLTSQLHITPG 117
+ + H + Q L++ GDE + + +R +D S L T
Sbjct: 32 RHGDSGTVVSRHELGGSELSDPTHKKLAQYLQQIGDELDNNVDLQRMLAD--SALQPTK- 88
Query: 118 TAYQSFEQVVNELFRDG-VNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLND 176
+ F +V E+F DG NWGR+VA F F L +E++ ++ ++ I +W YL +
Sbjct: 89 ---EVFVKVAREIFSDGKFNWGRVVALFYFASRLVIEALLTKIPDIIRTIINWTLDYLRE 145
Query: 177 HLEPWIQENGGWDTFVDLYGNNAAAESRKGQERFNRWFLTGMTVAGVV 224
H+ WI+E GGW+ +G W G+ +AGV+
Sbjct: 146 HVINWIREQGGWEGIQTYFGTPT-------------WKTVGVFLAGVL 180
>5W62-A nrPDB
Length = 192
Score = 115 bits (288), Expect = 1e-26, Method: Composition-based stats.
Identities = 38/172 (22%), Positives = 76/172 (44%), Gaps = 9/172 (5%)
Query: 29 DVEENRTEAPEETEAERETPSAINGNPSWHLADSPAVNGATGHSSSLDAREVIPMAAVKQ 88
D + + T +E+ + + + + G T + + + +
Sbjct: 2 DGSGEQLGSGGPTSSEQIMKTGAFLLQGFIQDRAGRMAGETPELTLEQPPQDASTKKLSE 61
Query: 89 ALREAGDEFE--LRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDG-VNWGRIVAFFS 145
+LR GDE + + +R +D+ + + + F +V ++F DG NWGR+VA F
Sbjct: 62 SLRRIGDELDSNMELQRMIADVDT------DSPREVFFRVAADMFADGNFNWGRVVALFY 115
Query: 146 FGGALCVESVDKEMQVLVSRIASWMATYLNDHLEPWIQENGGWDTFVDLYGN 197
F L ++++ ++ L+ I W +L + L WIQ+ GGW+ + +G
Sbjct: 116 FASKLVLKALSTKVPELIRTIMGWTLDFLRERLLVWIQDQGGWEGLLSYFGT 167
>5W61-A nrPDB
Length = 194
Score = 115 bits (286), Expect = 2e-26, Method: Composition-based stats.
Identities = 36/173 (20%), Positives = 73/173 (42%), Gaps = 9/173 (5%)
Query: 29 DVEENRTEAPEETEAERETPSAINGNPSWHLADSPAVNGATGHSSSLDAREVIPMAAVKQ 88
D + T +E+ + + + + G + + + +
Sbjct: 2 DGSGEQPRGGGPTSSEQIMKTGALLLQGFIQDRAGRMGGEAPELALDPVPQDASTKKLSE 61
Query: 89 ALREAGDEFE--LRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDG-VNWGRIVAFFS 145
+L+ GDE + + +R + + + + + F +V ++F DG NWGR+VA F
Sbjct: 62 SLKRIGDELDSNMELQRMIAAVDT------DSPREVFFRVAADMFSDGNFNWGRVVALFY 115
Query: 146 FGGALCVESVDKEMQVLVSRIASWMATYLNDHLEPWIQENGGWDTFVDLYGNN 198
F L ++++ ++ L+ I W +L + L WIQ+ GGWD + +G
Sbjct: 116 FASKLVLKALSTKVPELIRTIMGWTLDFLRERLLGWIQDQGGWDGLLSYFGTG 168
>2A5Y-A nrPDB
Length = 204
Score = 113 bits (282), Expect = 7e-26, Method: Composition-based stats.
Identities = 28/145 (19%), Positives = 59/145 (40%), Gaps = 7/145 (4%)
Query: 75 LDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVN-----E 129
+ + +R G FE ++ F + QL P ++ ++ VV +
Sbjct: 54 GAPGLPSGVQPEHEMMRVMGTIFEKKHAENFETFSEQLLAVPRISFSLYQDVVRTVGNAQ 113
Query: 130 LFRDGVNWGRIVAFFSFGGALCVESVDK-EMQVLVSRIASWMATYLNDHLE-PWIQENGG 187
+ +++GR++ SFGG + + ++ E+Q V + + + ++ + W + N
Sbjct: 114 TDQSPMSYGRLIGLISFGGFVAAKMMESVELQGQVRNLFVYTSLFIKTRIRNNWKEHNRS 173
Query: 188 WDTFVDLYGNNAAAESRKGQERFNR 212
WD F+ L R E+ R
Sbjct: 174 WDDFMTLGKQMKEDYERAEAEKVGR 198
>4BD6-A nrPDB
Length = 174
Score = 113 bits (282), Expect = 7e-26, Method: Composition-based stats.
Identities = 36/172 (20%), Positives = 73/172 (42%), Gaps = 9/172 (5%)
Query: 29 DVEENRTEAPEETEAERETPSAINGNPSWHLADSPAVNGATGHSSSLDAREVIPMAAVKQ 88
D + T +E+ + + + + G + + + +
Sbjct: 2 DGSGEQPRGGGPTSSEQIMKTGALLLQGFIQDRAGRMGGEAPELALDPVPQDASTKKLSE 61
Query: 89 ALREAGDEFE--LRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDG-VNWGRIVAFFS 145
+L+ GDE + + +R + + + + + F +V ++F DG NWGR+VA F
Sbjct: 62 SLKRIGDELDSNMELQRMIAAVDT------DSPREVFFRVAADMFSDGNFNWGRVVALFY 115
Query: 146 FGGALCVESVDKEMQVLVSRIASWMATYLNDHLEPWIQENGGWDTFVDLYGN 197
F L ++++ ++ L+ I W +L + L WIQ+ GGWD + +G
Sbjct: 116 FASKLVLKALSTKVPELIRTIMGWTLDFLRERLLGWIQDQGGWDGLLSYFGT 167
>5W5Z-A nrPDB
Length = 163
Score = 113 bits (281), Expect = 8e-26, Method: Composition-based stats.
Identities = 33/135 (24%), Positives = 63/135 (46%), Gaps = 9/135 (6%)
Query: 67 GATGHSSSLDAREVIPMAAVKQALREAGDEFE--LRYRRAFSDLTSQLHITPGTAYQSFE 124
G + + + ++L+ GDE + + +R + + + + + F
Sbjct: 9 GEAPELALDPVPQDASTKKLSESLKRIGDELDSNMELQRMIAAVDT------DSPREVFF 62
Query: 125 QVVNELFRDG-VNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEPWIQ 183
+V ++F DG NWGR+VA F F L ++++ ++ L+ I W +L + L WIQ
Sbjct: 63 RVAADMFSDGNFNWGRVVALFYFASKLVLKALSTKVPELIRTIMGWTLDFLRERLLGWIQ 122
Query: 184 ENGGWDTFVDLYGNN 198
+ GGWD + +G
Sbjct: 123 DQGGWDGLLSYFGTG 137
>4U2V-B nrPDB
Length = 315
Score = 103 bits (255), Expect = 9e-23, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 37/88 (42%)
Query: 73 SSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFR 132
++ M V + L GD+ RY F + L T AY+ F ++ LF
Sbjct: 228 TAAGITGSSTMGQVGRQLAIIGDDINRRYDSEFQTMLQHLQPTAENAYEYFTKIATSLFE 287
Query: 133 DGVNWGRIVAFFSFGGALCVESVDKEMQ 160
G+NWGR+VA FG L + +
Sbjct: 288 SGINWGRVVALLGFGYRLALHVYQHGLT 315
>5KTG-A nrPDB
Length = 311
Score = 99.6 bits (246), Expect = 9e-22, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 43/87 (49%)
Query: 72 SSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELF 131
+++ + V + L GD+ RY F +L QL T G AY+ F ++ + LF
Sbjct: 225 TAAGITGSNSILGQVGRQLALIGDDICRRYDTEFQNLLEQLQPTAGNAYELFTKIASSLF 284
Query: 132 RDGVNWGRIVAFFSFGGALCVESVDKE 158
+ G++WGR+VA FG L + +
Sbjct: 285 KSGISWGRVVALLGFGYRLALYVYQRG 311
>3I1H-A nrPDB
Length = 161
Score = 97.3 bits (240), Expect = 5e-21, Method: Composition-based stats.
Identities = 30/125 (24%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 77 AREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHI-TPGTAYQSFEQVVNELFRDGV 135
+ + + L+ + + +++ + TA F QV+ + F DG+
Sbjct: 34 PQPGSGPSKTSRVLQNVAFSVQKEVEKNLKSCLDNVNVVSVDTARTLFNQVMEKEFEDGI 93
Query: 136 -NWGRIVAFFSFGGALCVESVDKEMQVLVSR---IASWMATYLNDHLEPWIQENGGWD-T 190
NWGRIV F+F G L + + +++ V I+ ++A ++ ++ WI++NGGW+
Sbjct: 94 INWGRIVTIFAFEGILIKKLLRQQIAPDVDTYKEISYFVAEFIMNNTGEWIRQNGGWENG 153
Query: 191 FVDLY 195
FV +
Sbjct: 154 FVKKF 158
>2VOG-A nrPDB
Length = 157
Score = 96.9 bits (239), Expect = 6e-21, Method: Composition-based stats.
Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 6/119 (5%)
Query: 83 MAAVKQALREAGDEFELRYRRAFSDLTSQLHI-TPGTAYQSFEQVVNELFRDGV-NWGRI 140
+ + L+ + + H+ + TA F QV+ + F DG+ NWGRI
Sbjct: 35 PSQACRVLQRVAFSVQKEVEKNLKSYLDDFHVESIDTARIIFNQVMEKEFEDGIINWGRI 94
Query: 141 VAFFSFGGALCVESVDKEMQVLVS---RIASWMATYLNDHLEPWIQENGGW-DTFVDLY 195
V F+FGG L + +++ + VS +++S++A ++ ++ WI++NGGW D F+ +
Sbjct: 95 VTIFAFGGVLLKKLKQEQIALDVSAYKQVSSFVAEFIMNNTGEWIRQNGGWEDGFIKKF 153
>5TWA-A nrPDB
Length = 187
Score = 91.2 bits (224), Expect = 4e-19, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 1/94 (1%)
Query: 102 RRAFSDLTSQ-LHITPGTAYQSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQ 160
R D +TP F +V F DGV+WGR++AF +F + + +
Sbjct: 84 ERNVRDFRRGGWDVTPDNVESEFREVERRTFSDGVHWGRVIAFLAFSMSFAAYVNSRGID 143
Query: 161 VLVSRIASWMATYLNDHLEPWIQENGGWDTFVDL 194
+ +W LND L +IQ GW F+
Sbjct: 144 GGAYSVFNWTLRVLNDSLADFIQRENGWRGFIVY 177
>3QBR-A nrPDB
Length = 179
Score = 90.4 bits (222), Expect = 6e-19, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 48/125 (38%), Gaps = 10/125 (8%)
Query: 80 VIPMAAVKQALREAGDEFELRYRR--AFSDLTSQLHITPGTAYQS------FEQVVNELF 131
+ L+ GD F R+ + + L I + +++N LF
Sbjct: 56 PNGQEIIHSLLQLVGD-FNQRFSQTHEIEPVAQSLGIDSDKPVDKTALEIFYLEILNGLF 114
Query: 132 RDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEPWIQENGGWDTF 191
+NWGRIVA F+F L + + + + Y ++ L+ WI + GW
Sbjct: 115 E-KLNWGRIVAMFAFLRILVLRLSKHGHSDAIQMLIKTTSQYSDEKLKNWINLHDGWSGL 173
Query: 192 VDLYG 196
++ G
Sbjct: 174 IEFSG 178
>5UA4-A nrPDB
Length = 153
Score = 83.8 bits (205), Expect = 5e-17, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 123 FEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEPWI 182
F VV ELF+D +NWGRI F F + D L S + + ++ +L PW+
Sbjct: 75 FTGVVTELFKDLINWGRICGFIVFSAKMAKYCKDANNH-LESTVITTAYNFMKHNLLPWM 133
Query: 183 QENGGWDTFVDLY 195
+GG + F+
Sbjct: 134 ISHGGQEEFLAFS 146
>4BDU-A nrPDB
Length = 311
Score = 66.1 bits (159), Expect = 1e-11, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 72 SSSLDAREVIPMAAVKQALREAGDEFE--LRYRRAFSDLTSQLHITPGTAYQSFEQVVNE 129
+++ + ++L+ GDE + + +R + + + + + F +V +
Sbjct: 228 TAAGITGSDASTKKLSESLKRIGDELDSNMELQRMIAAVDT------DSPREVFFRVAAD 281
Query: 130 LFRDG-VNWGRIVAFFSFGGALCVESVDKE 158
+F DG NWGR+VA F F L ++++ +
Sbjct: 282 MFSDGNFNWGRVVALFYFASKLVLKALSTK 311
>4B4S-A nrPDB
Length = 175
Score = 56.9 bits (135), Expect = 8e-09, Method: Composition-based stats.
Identities = 32/166 (19%), Positives = 53/166 (31%), Gaps = 24/166 (14%)
Query: 52 NGNPSWHLADSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQ 111
+ +P + + + E P LR A +R F S
Sbjct: 3 SADPLRERTELLLADYLGYSAREPGTPEPAPSTPEAAVLRSAAARLRQIHRSFF----SA 58
Query: 112 LHITPGTAYQSFEQVVNELFRD--GVNWGRIVAFFSFGGALCVES--------------V 155
PG ++ + + + D G WGR+V +F G L
Sbjct: 59 YLGYPGNRFELVALMADSVLSDSPGPTWGRVVTLVTFAGTLLERGPLVTARWKKWGFQPR 118
Query: 156 DKEMQVLV----SRIASWMATYLNDHLEPWIQENGGWDTFVDLYGN 197
KE + V R+ + +++ L W+Q GGWD F +
Sbjct: 119 LKEQEGDVARDSQRLVALLSSRLMGQHRAWLQAQGGWDGFSHFFRT 164
>5WOS-A nrPDB
Length = 148
Score = 52.6 bits (124), Expect = 1e-07, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 28/67 (41%)
Query: 125 QVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEPWIQE 184
++V + D + WGR+++ +FG + +K +V + + L W+ +
Sbjct: 80 EIVYDTIHDKITWGRVISIIAFGAYVTKVFKEKGRDNVVDLMPDIITESLLSRCRSWLSD 139
Query: 185 NGGWDTF 191
WD
Sbjct: 140 QNCWDGL 146
>5TZP-A nrPDB
Length = 148
Score = 49.6 bits (116), Expect = 1e-06, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 27/76 (35%), Gaps = 2/76 (2%)
Query: 123 FEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIA-SWMATYLNDHLEPW 181
F +V ++ D +NWGRI+ +F + I + + W
Sbjct: 74 FNVIVTQVLEDKINWGRIITIIAFCAYYSKKVKQDTSPQYYDGIISEAITDAILSKYRSW 133
Query: 182 IQENGGWDTFVDLYGN 197
+ W+ + +Y N
Sbjct: 134 FIDQDYWNG-IRIYKN 148
>1K3K-A nrPDB
Length = 158
Score = 44.2 bits (102), Expect = 5e-05, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 36/103 (34%), Gaps = 6/103 (5%)
Query: 95 DEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDG-VNWGRIVAFFSFGGALCVE 153
F + + + T + ++ DG +NWGR +A +FG + +
Sbjct: 41 TGLMRDKESLFEAMLANVRFHSTTGIDQLGLSMLQVSGDGNMNWGRALAILTFGSFVAQK 100
Query: 154 SVDKEMQVLVSRIASWMA-TYLNDHLEP-WIQENGGWDTFVDL 194
+ + + A + Y + + P W + GGW
Sbjct: 101 LSN---EPHLRDFALAVLPAYAYEAIGPQWFRARGGWRGLKAY 140
>2KUA-A nrPDB
Length = 170
Score = 43.8 bits (101), Expect = 6e-05, Method: Composition-based stats.
Identities = 29/163 (17%), Positives = 58/163 (35%), Gaps = 19/163 (11%)
Query: 50 AINGNPSWHLADSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLT 109
A + +P + + D E P + LR + + ++ FS
Sbjct: 7 ADSQDPLHERTRRLLSDYIFFCAREPDTPEPPPTSVEAALLRSVTRQIQQEHQEFFSSFC 66
Query: 110 SQLHITPGTAYQSFEQVVNELFR--DGVNWGRIVAFFSFGGAL--------CVESVDKEM 159
+ G + +Q+ ++L +W ++V +F G L + D
Sbjct: 67 E----SRGNRLELVKQMADKLLSKDQDFSWSQLVMLLAFAGTLMNQGPYMAVKQKRDLGN 122
Query: 160 QVLVSR----IASWMATYLN-DHLEPWIQENGGWDTFVDLYGN 197
+V+V+R I +++ L ++ GGWD F + N
Sbjct: 123 RVIVTRDCCLIVNFLYNLLMGRRHRARLEALGGWDGFCRFFKN 165
>5VMN-A nrPDB
Length = 132
Score = 40.3 bits (92), Expect = 7e-04, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Query: 124 EQVVNELFRDG-VNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLN-DHLEPW 181
++ N + DG +NWGRI+ G + E + ++I + + D + W
Sbjct: 54 LEIGNNIVSDGNLNWGRILILL---GISQLYFTKSESESERTQITEQLERFFRQDAISNW 110
Query: 182 IQENGGW 188
I NGGW
Sbjct: 111 IASNGGW 117
>4MI8-A nrPDB
Length = 143
Score = 35.7 bits (80), Expect = 0.016, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 24/60 (40%), Gaps = 3/60 (5%)
Query: 96 EFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESV 155
EF Y + + + ++ LF D +N GRIV FF G +C E +
Sbjct: 48 EFRRHYDSVYR---ADYGPALKNWKRDLSKLFTSLFVDVINSGRIVGFFDVGRYVCEEVL 104
>2XPX-A nrPDB
Length = 173
Score = 32.2 bits (71), Expect = 0.17, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 46/129 (35%), Gaps = 2/129 (1%)
Query: 67 GATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQV 126
++ + P V +E R F++ ++ F V
Sbjct: 40 PVLELAARETPLRLSPEDTVVLRYHVLLEEIIERNSETFTETWNRFITHTEHVDLDFNSV 99
Query: 127 VNELFRDG-VNWGRIVAFFSFGGALCVE-SVDKEMQVLVSRIASWMATYLNDHLEPWIQE 184
E+F G + GR +A+ ++ C ++ V ++ ++ L+ WI +
Sbjct: 100 FLEIFHRGDPSLGRALAWMAWCMHACRTLCCNQSTPYYVVDLSVRGMLEASEGLDGWIHQ 159
Query: 185 NGGWDTFVD 193
GGW T ++
Sbjct: 160 QGGWSTLIE 168
>2Z1S-A nrPDB
Length = 454
Score = 29.9 bits (65), Expect = 0.98, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 33/86 (38%), Gaps = 12/86 (13%)
Query: 135 VNWGRIV---AFFSFGGALCVE--SVDKEMQVLVSRIASWMATYLNDHLEPWIQENGGW- 188
V W RI+ + G L E + E+ L+ + + L WI++ GGW
Sbjct: 88 VAWPRIMPAAGIINEEGLLFYEHLLDEIELAGLIPMLTLYHWD-----LPQWIEDEGGWT 142
Query: 189 -DTFVDLYGNNAAAESRKGQERFNRW 213
+ + A+ + ER N W
Sbjct: 143 QRETIQHFKTYASVIMDRFGERINWW 168
>4QJ3-A nrPDB
Length = 379
Score = 29.5 bits (64), Expect = 1.2, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 23/58 (39%), Gaps = 4/58 (6%)
Query: 83 MAAVKQALREAGDEFELRYRRAFSDLTSQLHI----TPGTAYQSFEQVVNELFRDGVN 136
++ + R DE E + RR D +L + T + +F + + + G +
Sbjct: 31 LSEEAKEARRINDEIERQLRRDKRDARRELKLLLLGTGESGKSTFIKQMRIIHGSGYS 88
>4EO9-A nrPDB
Length = 268
Score = 29.5 bits (64), Expect = 1.2, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 30/78 (38%), Gaps = 5/78 (6%)
Query: 160 QVLVSRIASWMATYLNDHLEPWIQENGGWDTFVDLYG-----NNAAAESRKGQERFNRWF 214
L+ R + L+ WI W YG + A ++R G+ERF W
Sbjct: 81 TSLLRRAITTAHLALDTADWLWIPVRRSWRLNERHYGALQGLDKAVTKARYGEERFMAWR 140
Query: 215 LTGMTVAGVVLLGSLFSR 232
+ T + GS FS+
Sbjct: 141 RSYDTPPPPIEKGSEFSQ 158
>3IT4-B nrPDB
Length = 205
Score = 29.1 bits (63), Expect = 1.6, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 31/82 (37%), Gaps = 12/82 (14%)
Query: 73 SSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLH------ITPGTAYQSFEQV 126
SS + A + +A+ D+ + + +T ++ T A + Q+
Sbjct: 48 SSGASEIPPAQADLDEAVLRVCDDLCAQLQADAEGVTKRVTVTVTGAATEDDALVAARQI 107
Query: 127 VNE------LFRDGVNWGRIVA 142
+ LF NWGR++A
Sbjct: 108 ARDSLVKTALFGSDPNWGRVLA 129
>3GKQ-A nrPDB
Length = 389
Score = 28.8 bits (62), Expect = 2.0, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 18/38 (47%)
Query: 175 NDHLEPWIQENGGWDTFVDLYGNNAAAESRKGQERFNR 212
+EP+ ++ GW V + A E R+ ++NR
Sbjct: 338 RRSMEPFYADDRGWREEVLFESDRAIIEWRRLASQYNR 375
>1RII-A nrPDB
Length = 265
Score = 28.8 bits (62), Expect = 2.1, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 30/78 (38%), Gaps = 5/78 (6%)
Query: 160 QVLVSRIASWMATYLNDHLEPWIQENGGWDTFVDLYG-----NNAAAESRKGQERFNRWF 214
L+ R + L+ WI W YG + A ++R G+E+F W
Sbjct: 58 TSLLRRAITTAHLALDSADRLWIPVRRSWRLNERHYGALQGLDKAETKARYGEEQFMAWR 117
Query: 215 LTGMTVAGVVLLGSLFSR 232
+ T + GS FS+
Sbjct: 118 RSYDTPPPPIERGSQFSQ 135
>5HY2-A nrPDB
Length = 410
Score = 28.0 bits (60), Expect = 3.5, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 24/71 (33%)
Query: 39 EETEAERETPSAINGNPSWHLADSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFE 98
EA SA S H+ A N + + V P + V + G
Sbjct: 22 PNPEASLSPRSARYPKASMHVVPMLAPNDTAAFRALFASGAVDPASVVALIAKSEGSGLH 81
Query: 99 LRYRRAFSDLT 109
+ R F+D++
Sbjct: 82 NDHARVFADVS 92
>3PUG-A nrPDB
Length = 433
Score = 27.6 bits (59), Expect = 4.6, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 36/116 (31%), Gaps = 12/116 (10%)
Query: 11 DFLSYKLSQKGYSWSQFSDVEENRTEAPEETEAERETPSAINGNPSWHLADSPAVNGATG 70
D LS + + GY D E A+ + D +
Sbjct: 302 DRLSLEATDGGYELRVGGDARE--------LTADELREELLGLTSYVPSMDDIVDSMEEF 353
Query: 71 HSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQV 126
++ R I M LR G E ++ R + + T Q +TP F+ V
Sbjct: 354 EAAKEAGRGAIAMTQ-SATLRIGGTEIDIEKDRMWDEATYQAAMTP---ISLFQDV 405
Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
Posted date: Jan 3, 2023 9:05 PM
Number of letters in database: 10,336,785
Number of sequences in database: 36,641
Lambda K H
0.306 0.111 0.285
Lambda K H
0.267 0.0337 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,338,234
Number of Sequences: 36641
Number of extensions: 255401
Number of successful extensions: 922
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 768
Number of HSP's gapped (non-prelim): 138
length of query: 233
length of database: 10,336,785
effective HSP length: 94
effective length of query: 139
effective length of database: 6,892,531
effective search space: 958061809
effective search space used: 958061809
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.3 bits)
S2: 57 (26.8 bits)