BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q5Z8S0 (207 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 4OIC-A nrPDB 419 e-118 3NJ0-A nrPDB 235 1e-62 4JDA-A nrPDB 205 1e-53 5OR2-A nrPDB 186 7e-48 3WG8-A nrPDB 185 2e-47 4JDL-A nrPDB 167 2e-42 3NEF-A nrPDB 158 1e-39 3W9R-A nrPDB 145 8e-36 3R6P-A nrPDB 142 7e-35 4N0G-C nrPDB 115 1e-26 2I9Y-A nrPDB 51 4e-07 2CSB-A nrPDB 32 0.27 4C94-A nrPDB 31 0.43 3CNW-A nrPDB 30 0.53 5AMW-A nrPDB 30 0.73 4GFJ-A nrPDB 30 0.76 5HM5-A nrPDB 30 0.82 3CUO-A nrPDB 30 1.0 5A5G-A nrPDB 29 1.3 4KNS-A nrPDB 29 1.7 4M9W-A nrPDB 28 3.9 1YNF-A nrPDB 28 4.0 6ABV-A nrPDB 28 4.1 5A4J-A nrPDB 27 5.1 1VGM-A nrPDB 27 5.6 >4OIC-A nrPDB Length = 207 Score = 419 bits (1078), Expect = e-118, Method: Compositional matrix adjust. Identities = 207/207 (100%), Positives = 207/207 (100%) Query: 1 MEAHVERALREGLTEEERAALEPAVMAHHTFPPSTTTATTAAATCTSLVTQRVAAPVRAV 60 MEAHVERALREGLTEEERAALEPAVMAHHTFPPSTTTATTAAATCTSLVTQRVAAPVRAV Sbjct: 1 MEAHVERALREGLTEEERAALEPAVMAHHTFPPSTTTATTAAATCTSLVTQRVAAPVRAV 60 Query: 61 WPIVRSFGNPQRYKHFVRTCALAAGDGASVGSVREVTVVSGLPASTSTERLEMLDDDRHI 120 WPIVRSFGNPQRYKHFVRTCALAAGDGASVGSVREVTVVSGLPASTSTERLEMLDDDRHI Sbjct: 61 WPIVRSFGNPQRYKHFVRTCALAAGDGASVGSVREVTVVSGLPASTSTERLEMLDDDRHI 120 Query: 121 ISFRVVGGQHRLRNYRSVTSVTEFQPPAAGPGPAPPYCVVVESYVVDVPDGNTAEDTRMF 180 ISFRVVGGQHRLRNYRSVTSVTEFQPPAAGPGPAPPYCVVVESYVVDVPDGNTAEDTRMF Sbjct: 121 ISFRVVGGQHRLRNYRSVTSVTEFQPPAAGPGPAPPYCVVVESYVVDVPDGNTAEDTRMF 180 Query: 181 TDTVVKLNLQMLAAVAEDSSSASRRRD 207 TDTVVKLNLQMLAAVAEDSSSASRRRD Sbjct: 181 TDTVVKLNLQMLAAVAEDSSSASRRRD 207 >3NJ0-A nrPDB Length = 193 Score = 235 bits (599), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 113/186 (60%), Positives = 137/186 (73%), Gaps = 12/186 (6%) Query: 11 EGLTEEERAALEPAVMAHHTFPPSTTTATTAAATCTSLVTQRVAAPVRAVWPIVRSFGNP 70 +GLT+EE+ LEP + +H F P TT CTSL+TQR+ AP VWP++R F NP Sbjct: 11 KGLTDEEQKTLEPVIKTYHQFEPDPTT-------CTSLITQRIHAPASVVWPLIRRFDNP 63 Query: 71 QRYKHFVRTCALAAGDGASVGSVREVTVVSGLPASTSTERLEMLDDDRHIISFRVVGGQH 130 +RYKHFV+ C L +GDG VGSVREVTV+SGLPASTSTERLE +DDD ++SFRVVGG+H Sbjct: 64 ERYKHFVKRCRLISGDG-DVGSVREVTVISGLPASTSTERLEFVDDDHRVLSFRVVGGEH 122 Query: 131 RLRNYRSVTSVTEFQPPAAGPGPAPPYCVVVESYVVDVPDGNTAEDTRMFTDTVVKLNLQ 190 RL+NY+SVTSV EF +G Y VV+ESY VD+P+GNT EDT+MF DTVVKLNLQ Sbjct: 123 RLKNYKSVTSVNEFLNQDSG----KVYTVVLESYTVDIPEGNTEEDTKMFVDTVVKLNLQ 178 Query: 191 MLAAVA 196 L A Sbjct: 179 KLGVAA 184 >4JDA-A nrPDB Length = 192 Score = 205 bits (521), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 102/189 (53%), Positives = 130/189 (68%), Gaps = 12/189 (6%) Query: 12 GLTEEERAALEPAVMAHHTFPPSTTTATTAAATCTSLVTQRVAAPVRAVWPIVRSFGNPQ 71 GLT++E + L+ + HHTFP S T CTSL+ RV AP A+W VR F NP Sbjct: 7 GLTKDEFSTLDSIIRTHHTFPRSPNT-------CTSLIAHRVDAPAHAIWRFVRDFANPN 59 Query: 72 RYKHFVRTCAL-AAGDGAS---VGSVREVTVVSGLPASTSTERLEMLDDDRHIISFRVVG 127 +YKHF+++C + G+G VG++REV+VVSGLPASTS E LE+LD+++ I+SFRV+G Sbjct: 60 KYKHFIKSCTIRVNGNGIKEIKVGTIREVSVVSGLPASTSVEILEVLDEEKRILSFRVLG 119 Query: 128 GQHRLRNYRSVTSVTEFQPPAAGPGPAPPYCVVVESYVVDVPDGNTAEDTRMFTDTVVKL 187 G+HRL NYRSVTSV EF Y VV+ESY+VD+P GNT EDTRMF DTVVK Sbjct: 120 GEHRLNNYRSVTSVNEFVVLEKDK-KKRVYSVVLESYIVDIPQGNTEEDTRMFVDTVVKS 178 Query: 188 NLQMLAAVA 196 NLQ LA ++ Sbjct: 179 NLQNLAVIS 187 >5OR2-A nrPDB Length = 193 Score = 186 bits (472), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 92/190 (48%), Positives = 125/190 (65%), Gaps = 13/190 (6%) Query: 8 ALREGLTEEERAALEPAVMAHHTFPPSTTTATTAAATCTSLVTQRVAAPVRAVWPIVRSF 67 A+ LT EER+ L+ ++ HT+ +C+SL QR+ AP VW IVR F Sbjct: 2 AMASELTPEERSELKNSIAEFHTYQLD-------PGSCSSLHAQRIHAPPELVWSIVRRF 54 Query: 68 GNPQRYKHFVRTCALAAGDGASVGSVREVTVVSGLPASTSTERLEMLDDDRHIISFRVVG 127 PQ YKHF+++C++ VG R+V V+SGLPA+TSTERL++LDD+R + F ++G Sbjct: 55 DKPQTYKHFIKSCSVEQNFEMRVGCTRDVIVISGLPANTSTERLDILDDERRVTGFSIIG 114 Query: 128 GQHRLRNYRSVTSVTEFQPPAAGPGPAPPYCVVVESYVVDVPDGNTAEDTRMFTDTVVKL 187 G+HRL NY+SVT+V F+ + VV+ESYVVD+P+GN+ +DTRMF DTVVKL Sbjct: 115 GEHRLTNYKSVTTVHRFEKENR------IWTVVLESYVVDMPEGNSEDDTRMFADTVVKL 168 Query: 188 NLQMLAAVAE 197 NLQ LA VAE Sbjct: 169 NLQKLATVAE 178 >3WG8-A nrPDB Length = 227 Score = 185 bits (469), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 91/185 (49%), Positives = 123/185 (66%), Gaps = 13/185 (7%) Query: 13 LTEEERAALEPAVMAHHTFPPSTTTATTAAATCTSLVTQRVAAPVRAVWPIVRSFGNPQR 72 LT EER+ L+ ++ HT+ +C+SL QR+ AP VW IVR F PQ Sbjct: 41 LTPEERSELKNSIAEFHTY-------QLDPGSCSSLHAQRIHAPPELVWSIVRRFDKPQT 93 Query: 73 YKHFVRTCALAAGDGASVGSVREVTVVSGLPASTSTERLEMLDDDRHIISFRVVGGQHRL 132 YKHF+++C++ VG R+V V+SGLPA+TSTERL++LDD+R + F ++GG+HRL Sbjct: 94 YKHFIKSCSVEQNFEMRVGCTRDVIVISGLPANTSTERLDILDDERRVTGFSIIGGEHRL 153 Query: 133 RNYRSVTSVTEFQPPAAGPGPAPPYCVVVESYVVDVPDGNTAEDTRMFTDTVVKLNLQML 192 NY+SVT+V F+ + VV+ESYVVD+P+GN+ +DTRMF DTVVKLNLQ L Sbjct: 154 TNYKSVTTVHRFEKENR------IWTVVLESYVVDMPEGNSEDDTRMFADTVVKLNLQKL 207 Query: 193 AAVAE 197 A VAE Sbjct: 208 ATVAE 212 >4JDL-A nrPDB Length = 223 Score = 167 bits (424), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 83/149 (55%), Positives = 103/149 (69%), Gaps = 9/149 (6%) Query: 45 CTSLVTQRVAAPVRAVWPIVRSFGNPQRYKHFVRTCALAAGDGASVGSVREVTVVSGLPA 104 C S V Q + AP +VW +VR F NP+ YK+F+R C + GDG VG +REV VVSGLPA Sbjct: 78 CCSSVVQMIHAPPESVWALVRRFDNPKVYKNFIRQCRIVQGDGLHVGDLREVMVVSGLPA 137 Query: 105 STSTERLEMLDDDRHIISFRVVGGQHRLRNYRSVTSVTEFQPPAAGPGPAPPYCVVVESY 164 +STERLE+LD++RH+ISF VVGG HRL+NYRSVT++ VVVESY Sbjct: 138 VSSTERLEILDEERHVISFSVVGGDHRLKNYRSVTTLHASDDEGT---------VVVESY 188 Query: 165 VVDVPDGNTAEDTRMFTDTVVKLNLQMLA 193 +VDVP GNT E+T F DT+V+ NLQ LA Sbjct: 189 IVDVPPGNTEEETLSFVDTIVRCNLQSLA 217 >3NEF-A nrPDB Length = 202 Score = 158 bits (400), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 86/185 (46%), Positives = 120/185 (64%), Gaps = 10/185 (5%) Query: 13 LTEEERAALEPAVMAHHTFPPSTTTATTAAATCTSLVTQRVAAPVRAVWPIVRSFGNPQR 72 LT++E L ++ HT+ C+SL+ QR+ AP VW +VR F PQ Sbjct: 13 LTQDEFTQLSQSIAEFHTYQ-------LGNGRCSSLLAQRIHAPPETVWSVVRRFDRPQI 65 Query: 73 YKHFVRTCALAAGDGASVGSVREVTVVSGLPASTSTERLEMLDDDRHIISFRVVGGQHRL 132 YKHF+++C ++ VG R+V V+SGLPA+TS ERL++LDDDR + F + GG+HRL Sbjct: 66 YKHFIKSCNVSEDFEMRVGCTRDVNVISGLPANTSRERLDLLDDDRRVTGFSITGGEHRL 125 Query: 133 RNYRSVTSVTEFQPPAAGPGPAPPYCVVVESYVVDVPDGNTAEDTRMFTDTVVKLNLQML 192 RNY+SVT+V F+ + VV+ESYVVDVP+GN+ EDTR+F DTV++LNLQ L Sbjct: 126 RNYKSVTTVHRFEKEEE---EERIWTVVLESYVVDVPEGNSEEDTRLFADTVIRLNLQKL 182 Query: 193 AAVAE 197 A++ E Sbjct: 183 ASITE 187 >3W9R-A nrPDB Length = 189 Score = 145 bits (367), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 74/157 (47%), Positives = 105/157 (66%), Gaps = 8/157 (5%) Query: 45 CTSLVTQRVAAPVRAVWPIVRSFGNPQRYKHFVRTCALAAGDGASVGSVREVTVVSGLPA 104 CTS + + + AP+ VW +VR F PQ+YK FV C + GD +GS+REV V SGLPA Sbjct: 36 CTSALVKHIKAPLHLVWSLVRRFDQPQKYKPFVSRCTVI-GD-PEIGSLREVNVKSGLPA 93 Query: 105 STSTERLEMLDDDRHIISFRVVGGQHRLRNYRSVTSVTEFQPPAAGPGPAPPYCVVVESY 164 +TSTERLE+LDD+ HI+ +++GG HRL+NY S+ +V P G A +V+ES+ Sbjct: 94 TTSTERLELLDDEEHILGIKIIGGDHRLKNYSSILTVH----PEIIEGRAGT--MVIESF 147 Query: 165 VVDVPDGNTAEDTRMFTDTVVKLNLQMLAAVAEDSSS 201 VVDVP GNT ++T F + +++ NL+ LA V+E +S Sbjct: 148 VVDVPQGNTKDETCYFVEALIRCNLKSLADVSERLAS 184 >3R6P-A nrPDB Length = 191 Score = 142 bits (359), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 71/156 (45%), Positives = 98/156 (62%), Gaps = 9/156 (5%) Query: 43 ATCTSLVTQRVAAPVRAVWPIVRSFGNPQRYKHFVRTCALAAGDGASVGSVREVTVVSGL 102 + C+S + + + AP+ VW IVR F PQ+YK F+ C + G VGSVREV + SGL Sbjct: 25 SQCSSTLVKHIKAPLHLVWSIVRRFDEPQKYKPFISRCVVQ-GKKLEVGSVREVDLKSGL 83 Query: 103 PASTSTERLEMLDDDRHIISFRVVGGQHRLRNYRSVTSV-TEFQPPAAGPGPAPPYCVVV 161 PA+ STE LE+LDD+ HI+ R+VGG HRL+NY S S+ +E G + + Sbjct: 84 PATKSTEVLEILDDNEHILGIRIVGGDHRLKNYSSTISLHSETIDGKTGT-------LAI 136 Query: 162 ESYVVDVPDGNTAEDTRMFTDTVVKLNLQMLAAVAE 197 ES+VVDVP+GNT E+T F + +++ NL LA V E Sbjct: 137 ESFVVDVPEGNTKEETCFFVEALIQCNLNSLADVTE 172 >4N0G-C nrPDB Length = 164 Score = 115 bits (289), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 73/158 (46%), Positives = 97/158 (61%), Gaps = 11/158 (6%) Query: 45 CTSLVTQRVAAPVRAVWPIVRSFGNPQRYKHFVRTCALAAGDGASVG-----SVREVTVV 99 C S V + + AP+ VW I+RSF PQ Y+ FV++C + +G G G SVR+VT+V Sbjct: 9 CRSSVVETIEAPLPLVWSILRSFDKPQAYQRFVKSCTMRSGGGGGKGGEGKGSVRDVTLV 68 Query: 100 SGLPASTSTERLEMLDDDRHIISFRVVGGQHRLRNYRSVTSVTEFQPPAAGPGPAPPYCV 159 SG PA STERLE LDD+ H++ ++GG HRL NY+S T V A P V Sbjct: 69 SGFPADFSTERLEELDDESHVMVVSIIGGNHRLVNYKSKTKV------VASPEDMAKKTV 122 Query: 160 VVESYVVDVPDGNTAEDTRMFTDTVVKLNLQMLAAVAE 197 VVESYVVDVP+G + EDT F D +++ NL LA + + Sbjct: 123 VVESYVVDVPEGTSEEDTIFFVDNIIRYNLTSLAKLTK 160 >2I9Y-A nrPDB Length = 166 Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 1/76 (1%) Query: 77 VRTCALAAGDGASVGSVREVTVVSGLPASTSTERLEMLDDDRHIISFRVVGGQHRLRNYR 136 ++ C L GD +VGS+ V A + ER+E ++ D+++I+FRV+ G ++ Y+ Sbjct: 51 IQGCDLHEGDWGTVGSIVFWNYVHDGEAKVAKERIEAVEPDKNLITFRVIEGD-LMKEYK 109 Query: 137 SVTSVTEFQPPAAGPG 152 S + P GPG Sbjct: 110 SFLLTIQVTPKPGGPG 125 >2CSB-A nrPDB Length = 519 Score = 31.6 bits (70), Expect = 0.27, Method: Compositional matrix adjust. Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 2/72 (2%) Query: 63 IVRSFGNPQRYKHFVRTCALAAGDGASVGSVREVTVVSGLPASTSTERLEMLDDDRHIIS 122 ++R+FGNP+R K R + ASV V E + S +P S + +D +R Sbjct: 427 LLRAFGNPERVKQLAREFEIEK--LASVEGVGERVLRSLVPGYASLISIRGIDRERAERL 484 Query: 123 FRVVGGQHRLRN 134 + GG ++R Sbjct: 485 LKKYGGYSKVRE 496 >4C94-A nrPDB Length = 161 Score = 30.8 bits (68), Expect = 0.43, Method: Compositional matrix adjust. Identities = 12/52 (23%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Query: 77 VRTCALAAGDGASVGSVREVTVVSGLPASTSTERLEMLDDDRHIISFRVVGG 128 V++ + GDG VG+++++ + G S +++ +D D + S+ ++ G Sbjct: 41 VKSAEIIEGDGG-VGTIKKIHLGEGSEYSYVKHKIDGIDKDNFVYSYSIIEG 91 >3CNW-A nrPDB Length = 148 Score = 30.4 bits (67), Expect = 0.53, Method: Compositional matrix adjust. Identities = 24/102 (23%), Positives = 41/102 (40%), Gaps = 11/102 (10%) Query: 42 AATCTSLVTQRVAAPVRAVWPIVRSFGNPQRYKHFVRTCALAAGDGASVGSVREVTVVSG 101 A T TS+ + VW ++ F + + ++ + L G G VR + G Sbjct: 4 AHTTTSM---EIFGSPEQVWQLIGGFNSLPDWLPYIPSSKLTEG-----GRVRHLANPDG 55 Query: 102 LPASTSTERLEMLDDDRHIISFRVVGGQHRLRNYRSVTSVTE 143 T ERLE+ +D ++ ++ + NY S V E Sbjct: 56 ---DTIIERLEVFNDKERYYTYSIMNAPFPVTNYLSTIQVKE 94 >5AMW-A nrPDB Length = 162 Score = 30.0 bits (66), Expect = 0.73, Method: Compositional matrix adjust. Identities = 12/52 (23%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Query: 77 VRTCALAAGDGASVGSVREVTVVSGLPASTSTERLEMLDDDRHIISFRVVGG 128 V+ + GDG VG+++++T G + T +++ +D + + S+ ++ G Sbjct: 41 VKCAEIIEGDGG-VGTIKKITFGEGSQFGSVTHKIDGIDKENFVYSYSLIEG 91 >4GFJ-A nrPDB Length = 685 Score = 30.0 bits (66), Expect = 0.76, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 2/71 (2%) Query: 63 IVRSFGNPQRYKHFVRTCALAAGDGASVGSVREVTVVSGLPASTSTERLEMLDDDRHIIS 122 ++R+FGNP+R K R + ASV V E + S +P S + +D +R Sbjct: 427 LLRAFGNPERVKQLAREFEIE--KLASVEGVGERVLRSLVPGYASLISIRGIDRERAERL 484 Query: 123 FRVVGGQHRLR 133 + GG ++R Sbjct: 485 LKKYGGYSKVR 495 >5HM5-A nrPDB Length = 854 Score = 30.0 bits (66), Expect = 0.82, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 2/71 (2%) Query: 63 IVRSFGNPQRYKHFVRTCALAAGDGASVGSVREVTVVSGLPASTSTERLEMLDDDRHIIS 122 ++R+FGNP+R K R + ASV V E + S +P S + +D +R Sbjct: 427 LLRAFGNPERVKQLAREFEIE--KLASVEGVGERVLRSLVPGYASLISIRGIDRERAERL 484 Query: 123 FRVVGGQHRLR 133 + GG ++R Sbjct: 485 LKKYGGYSKVR 495 >3CUO-A nrPDB Length = 99 Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust. Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 6/62 (9%) Query: 63 IVRSFGNPQRYKHFVRTCALAAGDGASVGSVREVTVVSGLPASTSTERLEMLDDDRHIIS 122 ++++ +P+R + C L+ G S G E+T ++GL AS +++ L + D+ I S Sbjct: 17 LLKAMSHPKR---LLILCMLSGSPGTSAG---ELTRITGLSASATSQHLARMRDEGLIDS 70 Query: 123 FR 124 R Sbjct: 71 QR 72 >5A5G-A nrPDB Length = 558 Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust. Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 65 RSFGNPQRYKHFVRTCALAAGDGASVGSVREVTVVSGLPASTSTERLEMLDDDRHIIS 122 + G P + VR +++AG G V ++ + GLP + E++++ D++ +IS Sbjct: 500 KKLGRPSGFNITVRDVSVSAGAGFIVAVTGDIMKMPGLPKVPAAEKIDV--DEKGVIS 555 >4KNS-A nrPDB Length = 285 Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust. Identities = 11/41 (26%), Positives = 23/41 (56%) Query: 56 PVRAVWPIVRSFGNPQRYKHFVRTCALAAGDGASVGSVREV 96 P+ +W V GNP+ ++ +++ + AGD A++ + V Sbjct: 204 PIAGIWDRVYPSGNPKNVQYALQSYLIGAGDAATLDLISPV 244 >4M9W-A nrPDB Length = 157 Score = 27.7 bits (60), Expect = 3.9, Method: Compositional matrix adjust. Identities = 12/52 (23%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Query: 77 VRTCALAAGDGASVGSVREVTVVSGLPASTSTERLEMLDDDRHIISFRVVGG 128 V++ + G+G G+++++T+V ++E +D+ + ++ VVGG Sbjct: 37 VKSVEIVEGNGGP-GTIKKLTIVEDGETKFILHKVESIDEANYAYNYSVVGG 87 >1YNF-A nrPDB Length = 458 Score = 27.7 bits (60), Expect = 4.0, Method: Compositional matrix adjust. Identities = 14/23 (60%), Positives = 16/23 (69%) Query: 9 LREGLTEEERAALEPAVMAHHTF 31 LR LTEEER A+ PAVM + T Sbjct: 379 LRVVLTEEERRAVNPAVMMNDTL 401 >6ABV-A nrPDB Length = 389 Score = 27.7 bits (60), Expect = 4.1, Method: Compositional matrix adjust. Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 2/44 (4%) Query: 14 TEEERAALEPAVM--AHHTFPPSTTTATTAAATCTSLVTQRVAA 55 TEEE A++ A++ A H P STT A ++T + + + VAA Sbjct: 177 TEEEVKAMDAALILYADHEVPASTTAALVTSSTLSDIYSCVVAA 220 >5A4J-A nrPDB Length = 559 Score = 27.3 bits (59), Expect = 5.1, Method: Compositional matrix adjust. Identities = 13/49 (26%), Positives = 24/49 (48%) Query: 65 RSFGNPQRYKHFVRTCALAAGDGASVGSVREVTVVSGLPASTSTERLEM 113 + G P +K VR ++AG G V + + GLP + E++++ Sbjct: 501 KLLGRPTGFKINVRNVKISAGAGFVVALTGAIMTMPGLPKRPAAEKIDV 549 >1VGM-A nrPDB Length = 378 Score = 26.9 bits (58), Expect = 5.6, Method: Compositional matrix adjust. Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 3/75 (4%) Query: 14 TEEERAALEPAVMAH--HTFPPSTTTATTAAATCTSLVTQRVAAPVRAVWPIVRSFGNPQ 71 T+EE A++ +++ + H P STT A A++T + + + VAA P+ + Sbjct: 167 TQEEIKAMDASLILYTDHEVPASTTAALVASSTLSDMYSCIVAALAALKGPL-HGGAAEE 225 Query: 72 RYKHFVRTCALAAGD 86 +K FV ++ D Sbjct: 226 AFKQFVEIGSVENAD 240 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4OIC-A nrPDB 320 3e-88 3WG8-A nrPDB 273 4e-74 5OR2-A nrPDB 272 6e-74 3NJ0-A nrPDB 261 1e-70 4JDA-A nrPDB 249 7e-67 3NEF-A nrPDB 243 5e-65 3W9R-A nrPDB 232 1e-61 4JDL-A nrPDB 231 1e-61 3R6P-A nrPDB 221 2e-58 4N0G-C nrPDB 170 4e-43 2I9Y-A nrPDB 105 2e-23 Sequences not found previously or not previously below threshold: 4IH2-A nrPDB 62 1e-10 4REI-A nrPDB 60 7e-10 4C94-A nrPDB 44 4e-05 2FLH-A nrPDB 43 9e-05 5GTE-A nrPDB 42 2e-04 1ICX-A nrPDB 42 2e-04 3CNW-A nrPDB 41 3e-04 5AMW-A nrPDB 41 5e-04 2K7H-A nrPDB 37 0.005 1XDF-A nrPDB 37 0.005 3E85-A nrPDB 36 0.014 1E09-A nrPDB 35 0.020 3IE5-A nrPDB 35 0.026 4M9W-A nrPDB 35 0.026 2BK0-A nrPDB 35 0.029 5MMU-A nrPDB 34 0.044 1TW0-A nrPDB 33 0.072 6ALK-A nrPDB 33 0.080 1IFV-A nrPDB 33 0.087 1FM4-A nrPDB 33 0.089 4BKC-A nrPDB 33 0.11 2RDO-K nrPDB 32 0.17 2WQL-A nrPDB 31 0.30 4C9I-A nrPDB 31 0.31 5XQL-A nrPDB 29 1.2 1A5Z-A nrPDB 29 1.6 5A5G-A nrPDB 29 1.7 5NON-A nrPDB 29 2.2 2VNE-A nrPDB 29 2.2 2ZYL-A nrPDB 28 2.3 3MRU-A nrPDB 28 2.5 5GWA-A nrPDB 27 5.8 >4OIC-A nrPDB Length = 207 Score = 320 bits (820), Expect = 3e-88, Method: Composition-based stats. Identities = 207/207 (100%), Positives = 207/207 (100%) Query: 1 MEAHVERALREGLTEEERAALEPAVMAHHTFPPSTTTATTAAATCTSLVTQRVAAPVRAV 60 MEAHVERALREGLTEEERAALEPAVMAHHTFPPSTTTATTAAATCTSLVTQRVAAPVRAV Sbjct: 1 MEAHVERALREGLTEEERAALEPAVMAHHTFPPSTTTATTAAATCTSLVTQRVAAPVRAV 60 Query: 61 WPIVRSFGNPQRYKHFVRTCALAAGDGASVGSVREVTVVSGLPASTSTERLEMLDDDRHI 120 WPIVRSFGNPQRYKHFVRTCALAAGDGASVGSVREVTVVSGLPASTSTERLEMLDDDRHI Sbjct: 61 WPIVRSFGNPQRYKHFVRTCALAAGDGASVGSVREVTVVSGLPASTSTERLEMLDDDRHI 120 Query: 121 ISFRVVGGQHRLRNYRSVTSVTEFQPPAAGPGPAPPYCVVVESYVVDVPDGNTAEDTRMF 180 ISFRVVGGQHRLRNYRSVTSVTEFQPPAAGPGPAPPYCVVVESYVVDVPDGNTAEDTRMF Sbjct: 121 ISFRVVGGQHRLRNYRSVTSVTEFQPPAAGPGPAPPYCVVVESYVVDVPDGNTAEDTRMF 180 Query: 181 TDTVVKLNLQMLAAVAEDSSSASRRRD 207 TDTVVKLNLQMLAAVAEDSSSASRRRD Sbjct: 181 TDTVVKLNLQMLAAVAEDSSSASRRRD 207 >3WG8-A nrPDB Length = 227 Score = 273 bits (698), Expect = 4e-74, Method: Composition-based stats. Identities = 92/195 (47%), Positives = 126/195 (64%), Gaps = 13/195 (6%) Query: 9 LREGLTEEERAALEPAVMAHHTFPPSTTTATTAAATCTSLVTQRVAAPVRAVWPIVRSFG 68 + LT EER+ L+ ++ HT+ +C+SL QR+ AP VW IVR F Sbjct: 37 MPSELTPEERSELKNSIAEFHTYQLDP-------GSCSSLHAQRIHAPPELVWSIVRRFD 89 Query: 69 NPQRYKHFVRTCALAAGDGASVGSVREVTVVSGLPASTSTERLEMLDDDRHIISFRVVGG 128 PQ YKHF+++C++ VG R+V V+SGLPA+TSTERL++LDD+R + F ++GG Sbjct: 90 KPQTYKHFIKSCSVEQNFEMRVGCTRDVIVISGLPANTSTERLDILDDERRVTGFSIIGG 149 Query: 129 QHRLRNYRSVTSVTEFQPPAAGPGPAPPYCVVVESYVVDVPDGNTAEDTRMFTDTVVKLN 188 +HRL NY+SVT+V F+ + VV+ESYVVD+P+GN+ +DTRMF DTVVKLN Sbjct: 150 EHRLTNYKSVTTVHRFEKEN------RIWTVVLESYVVDMPEGNSEDDTRMFADTVVKLN 203 Query: 189 LQMLAAVAEDSSSAS 203 LQ LA VAE + S Sbjct: 204 LQKLATVAEAMARNS 218 >5OR2-A nrPDB Length = 193 Score = 272 bits (696), Expect = 6e-74, Method: Composition-based stats. Identities = 93/196 (47%), Positives = 127/196 (64%), Gaps = 13/196 (6%) Query: 8 ALREGLTEEERAALEPAVMAHHTFPPSTTTATTAAATCTSLVTQRVAAPVRAVWPIVRSF 67 A+ LT EER+ L+ ++ HT+ +C+SL QR+ AP VW IVR F Sbjct: 2 AMASELTPEERSELKNSIAEFHTYQLDP-------GSCSSLHAQRIHAPPELVWSIVRRF 54 Query: 68 GNPQRYKHFVRTCALAAGDGASVGSVREVTVVSGLPASTSTERLEMLDDDRHIISFRVVG 127 PQ YKHF+++C++ VG R+V V+SGLPA+TSTERL++LDD+R + F ++G Sbjct: 55 DKPQTYKHFIKSCSVEQNFEMRVGCTRDVIVISGLPANTSTERLDILDDERRVTGFSIIG 114 Query: 128 GQHRLRNYRSVTSVTEFQPPAAGPGPAPPYCVVVESYVVDVPDGNTAEDTRMFTDTVVKL 187 G+HRL NY+SVT+V F+ + VV+ESYVVD+P+GN+ +DTRMF DTVVKL Sbjct: 115 GEHRLTNYKSVTTVHRFEKEN------RIWTVVLESYVVDMPEGNSEDDTRMFADTVVKL 168 Query: 188 NLQMLAAVAEDSSSAS 203 NLQ LA VAE + S Sbjct: 169 NLQKLATVAEAMARNS 184 >3NJ0-A nrPDB Length = 193 Score = 261 bits (667), Expect = 1e-70, Method: Composition-based stats. Identities = 113/186 (60%), Positives = 137/186 (73%), Gaps = 12/186 (6%) Query: 11 EGLTEEERAALEPAVMAHHTFPPSTTTATTAAATCTSLVTQRVAAPVRAVWPIVRSFGNP 70 +GLT+EE+ LEP + +H F P TT CTSL+TQR+ AP VWP++R F NP Sbjct: 11 KGLTDEEQKTLEPVIKTYHQFEPDPTT-------CTSLITQRIHAPASVVWPLIRRFDNP 63 Query: 71 QRYKHFVRTCALAAGDGASVGSVREVTVVSGLPASTSTERLEMLDDDRHIISFRVVGGQH 130 +RYKHFV+ C L +GDG VGSVREVTV+SGLPASTSTERLE +DDD ++SFRVVGG+H Sbjct: 64 ERYKHFVKRCRLISGDG-DVGSVREVTVISGLPASTSTERLEFVDDDHRVLSFRVVGGEH 122 Query: 131 RLRNYRSVTSVTEFQPPAAGPGPAPPYCVVVESYVVDVPDGNTAEDTRMFTDTVVKLNLQ 190 RL+NY+SVTSV EF +G Y VV+ESY VD+P+GNT EDT+MF DTVVKLNLQ Sbjct: 123 RLKNYKSVTSVNEFLNQDSG----KVYTVVLESYTVDIPEGNTEEDTKMFVDTVVKLNLQ 178 Query: 191 MLAAVA 196 L A Sbjct: 179 KLGVAA 184 >4JDA-A nrPDB Length = 192 Score = 249 bits (635), Expect = 7e-67, Method: Composition-based stats. Identities = 103/194 (53%), Positives = 132/194 (68%), Gaps = 12/194 (6%) Query: 12 GLTEEERAALEPAVMAHHTFPPSTTTATTAAATCTSLVTQRVAAPVRAVWPIVRSFGNPQ 71 GLT++E + L+ + HHTFP S T CTSL+ RV AP A+W VR F NP Sbjct: 7 GLTKDEFSTLDSIIRTHHTFPRSPNT-------CTSLIAHRVDAPAHAIWRFVRDFANPN 59 Query: 72 RYKHFVRTCALA-AGDGAS---VGSVREVTVVSGLPASTSTERLEMLDDDRHIISFRVVG 127 +YKHF+++C + G+G VG++REV+VVSGLPASTS E LE+LD+++ I+SFRV+G Sbjct: 60 KYKHFIKSCTIRVNGNGIKEIKVGTIREVSVVSGLPASTSVEILEVLDEEKRILSFRVLG 119 Query: 128 GQHRLRNYRSVTSVTEFQPPAAGPGPAPPYCVVVESYVVDVPDGNTAEDTRMFTDTVVKL 187 G+HRL NYRSVTSV EF Y VV+ESY+VD+P GNT EDTRMF DTVVK Sbjct: 120 GEHRLNNYRSVTSVNEFVVLEKDK-KKRVYSVVLESYIVDIPQGNTEEDTRMFVDTVVKS 178 Query: 188 NLQMLAAVAEDSSS 201 NLQ LA ++ S + Sbjct: 179 NLQNLAVISTASPT 192 >3NEF-A nrPDB Length = 202 Score = 243 bits (619), Expect = 5e-65, Method: Composition-based stats. Identities = 86/191 (45%), Positives = 122/191 (63%), Gaps = 10/191 (5%) Query: 7 RALREGLTEEERAALEPAVMAHHTFPPSTTTATTAAATCTSLVTQRVAAPVRAVWPIVRS 66 + + LT++E L ++ HT+ C+SL+ QR+ AP VW +VR Sbjct: 7 QTMPSDLTQDEFTQLSQSIAEFHTYQ-------LGNGRCSSLLAQRIHAPPETVWSVVRR 59 Query: 67 FGNPQRYKHFVRTCALAAGDGASVGSVREVTVVSGLPASTSTERLEMLDDDRHIISFRVV 126 F PQ YKHF+++C ++ VG R+V V+SGLPA+TS ERL++LDDDR + F + Sbjct: 60 FDRPQIYKHFIKSCNVSEDFEMRVGCTRDVNVISGLPANTSRERLDLLDDDRRVTGFSIT 119 Query: 127 GGQHRLRNYRSVTSVTEFQPPAAGPGPAPPYCVVVESYVVDVPDGNTAEDTRMFTDTVVK 186 GG+HRLRNY+SVT+V F+ + VV+ESYVVDVP+GN+ EDTR+F DTV++ Sbjct: 120 GGEHRLRNYKSVTTVHRFEKEEE---EERIWTVVLESYVVDVPEGNSEEDTRLFADTVIR 176 Query: 187 LNLQMLAAVAE 197 LNLQ LA++ E Sbjct: 177 LNLQKLASITE 187 >3W9R-A nrPDB Length = 189 Score = 232 bits (591), Expect = 1e-61, Method: Composition-based stats. Identities = 77/179 (43%), Positives = 108/179 (60%), Gaps = 15/179 (8%) Query: 23 PAVMAHHTFPPSTTTATTAAATCTSLVTQRVAAPVRAVWPIVRSFGNPQRYKHFVRTCAL 82 V HH CTS + + + AP+ VW +VR F PQ+YK FV C + Sbjct: 21 QYVRTHHQH-------LCRENQCTSALVKHIKAPLHLVWSLVRRFDQPQKYKPFVSRCTV 73 Query: 83 AAGDGASVGSVREVTVVSGLPASTSTERLEMLDDDRHIISFRVVGGQHRLRNYRSVTSVT 142 GD +GS+REV V SGLPA+TSTERLE+LDD+ HI+ +++GG HRL+NY S+ +V Sbjct: 74 I-GD-PEIGSLREVNVKSGLPATTSTERLELLDDEEHILGIKIIGGDHRLKNYSSILTVH 131 Query: 143 EFQPPAAGPGPAPPYCVVVESYVVDVPDGNTAEDTRMFTDTVVKLNLQMLAAVAEDSSS 201 P G A +V+ES+VVDVP GNT ++T F + +++ NL+ LA V+E +S Sbjct: 132 ----PEIIEGRAG--TMVIESFVVDVPQGNTKDETCYFVEALIRCNLKSLADVSERLAS 184 >4JDL-A nrPDB Length = 223 Score = 231 bits (590), Expect = 1e-61, Method: Composition-based stats. Identities = 87/174 (50%), Positives = 107/174 (61%), Gaps = 16/174 (9%) Query: 25 VMAHHTFPPSTTTATTAAATCTSLVTQRVAAPVRAVWPIVRSFGNPQRYKHFVRTCALAA 84 V HHT C S V Q + AP +VW +VR F NP+ YK+F+R C + Sbjct: 65 VAMHHTH-------DVGPDQCCSSVVQMIHAPPESVWALVRRFDNPKVYKNFIRQCRIVQ 117 Query: 85 GDGASVGSVREVTVVSGLPASTSTERLEMLDDDRHIISFRVVGGQHRLRNYRSVTSVTEF 144 GDG VG +REV VVSGLPA +STERLE+LD++RH+ISF VVGG HRL+NYRSVT++ Sbjct: 118 GDGLHVGDLREVMVVSGLPAVSSTERLEILDEERHVISFSVVGGDHRLKNYRSVTTLHAS 177 Query: 145 QPPAAGPGPAPPYCVVVESYVVDVPDGNTAEDTRMFTDTVVKLNLQMLAAVAED 198 VVVESY+VDVP GNT E+T F DT+V+ NLQ LA Sbjct: 178 DDEG---------TVVVESYIVDVPPGNTEEETLSFVDTIVRCNLQSLARSTNR 222 >3R6P-A nrPDB Length = 191 Score = 221 bits (563), Expect = 2e-58, Method: Composition-based stats. Identities = 73/192 (38%), Positives = 105/192 (54%), Gaps = 14/192 (7%) Query: 15 EEERAALEPAVMAHHTFPPSTTTATTAAATCTSLVTQRVAAPVRAVWPIVRSFGNPQRYK 74 +E + + HH + C+S + + + AP+ VW IVR F PQ+YK Sbjct: 4 DETKKVESEYIKKHHRHE-------LVESQCSSTLVKHIKAPLHLVWSIVRRFDEPQKYK 56 Query: 75 HFVRTCALAAGDGASVGSVREVTVVSGLPASTSTERLEMLDDDRHIISFRVVGGQHRLRN 134 F+ C + G VGSVREV + SGLPA+ STE LE+LDD+ HI+ R+VGG HRL+N Sbjct: 57 PFISRC-VVQGKKLEVGSVREVDLKSGLPATKSTEVLEILDDNEHILGIRIVGGDHRLKN 115 Query: 135 YRSVTSVTEFQPPAAGPGPAPPYCVVVESYVVDVPDGNTAEDTRMFTDTVVKLNLQMLAA 194 Y S S+ + + +ES+VVDVP+GNT E+T F + +++ NL LA Sbjct: 116 YSSTISLH------SETIDGKTGTLAIESFVVDVPEGNTKEETCFFVEALIQCNLNSLAD 169 Query: 195 VAEDSSSASRRR 206 V E + S + Sbjct: 170 VTERLQAESMEK 181 >4N0G-C nrPDB Length = 164 Score = 170 bits (431), Expect = 4e-43, Method: Composition-based stats. Identities = 73/161 (45%), Positives = 97/161 (60%), Gaps = 11/161 (6%) Query: 44 TCTSLVTQRVAAPVRAVWPIVRSFGNPQRYKHFVRTCALAAGDGASVG-----SVREVTV 98 C S V + + AP+ VW I+RSF PQ Y+ FV++C + +G G G SVR+VT+ Sbjct: 8 RCRSSVVETIEAPLPLVWSILRSFDKPQAYQRFVKSCTMRSGGGGGKGGEGKGSVRDVTL 67 Query: 99 VSGLPASTSTERLEMLDDDRHIISFRVVGGQHRLRNYRSVTSVTEFQPPAAGPGPAPPYC 158 VSG PA STERLE LDD+ H++ ++GG HRL NY+S T V A P Sbjct: 68 VSGFPADFSTERLEELDDESHVMVVSIIGGNHRLVNYKSKTKV------VASPEDMAKKT 121 Query: 159 VVVESYVVDVPDGNTAEDTRMFTDTVVKLNLQMLAAVAEDS 199 VVVESYVVDVP+G + EDT F D +++ NL LA + + Sbjct: 122 VVVESYVVDVPEGTSEEDTIFFVDNIIRYNLTSLAKLTKKM 162 >2I9Y-A nrPDB Length = 166 Score = 105 bits (261), Expect = 2e-23, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 1/86 (1%) Query: 77 VRTCALAAGDGASVGSVREVTVVSGLPASTSTERLEMLDDDRHIISFRVVGGQHRLRNYR 136 ++ C L GD +VGS+ V A + ER+E ++ D+++I+FRV+ G ++ Y+ Sbjct: 51 IQGCDLHEGDWGTVGSIVFWNYVHDGEAKVAKERIEAVEPDKNLITFRVIEGD-LMKEYK 109 Query: 137 SVTSVTEFQPPAAGPGPAPPYCVVVE 162 S + P GPG + + E Sbjct: 110 SFLLTIQVTPKPGGPGSIVHWHLEYE 135 >4IH2-A nrPDB Length = 150 Score = 62.5 bits (150), Expect = 1e-10, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 41/97 (42%), Gaps = 3/97 (3%) Query: 77 VRTCALAAGDGASVGSVREVTVVSGLPASTSTERLEMLDDDRHIISFRVVGGQHRLRNYR 136 ++ L G+ +VGSV T+ + +E +D++ ++F++V G + Y+ Sbjct: 39 IQGVDLLEGNWGTVGSVIFFKYTIDGKEKTAKDIVEAIDEETKSVTFKIVEGD-LMELYK 97 Query: 137 SVTSVTEFQPPAAGPGPAPPYCVVVESYVVDVPDGNT 173 + + + G + + E DV + NT Sbjct: 98 TFIIIVQVDTK--GEHNSVTWTFHYEKLKEDVEEPNT 132 >4REI-A nrPDB Length = 151 Score = 59.8 bits (143), Expect = 7e-10, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 36/93 (38%), Gaps = 3/93 (3%) Query: 70 PQRYKHFVRTCALAAGDGASVGSVREVTVVSGLPASTSTERLEMLDDDRHIISFRVVGGQ 129 P ++ C L G+ VGSV A + E + +D++ ++F+VV G Sbjct: 32 PNITPANIQGCDLHEGEFGKVGSVVIWNYSIDGNAMIAKEEIVAIDEEDKSVTFKVVEG- 90 Query: 130 HRLRNYRSVTSVTEFQPPAAGPGPAPPYCVVVE 162 H ++S+ V G + + E Sbjct: 91 HLFEEFKSI--VFSVHVDTKGEDNLVTWSIDYE 121 >4C94-A nrPDB Length = 161 Score = 44.4 bits (103), Expect = 4e-05, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 35/76 (46%), Gaps = 3/76 (3%) Query: 56 PVRAVWPIVRSFGN--PQRYKHFVRTCALAAGDGASVGSVREVTVVSGLPASTSTERLEM 113 P + V N P+ V++ + GDG VG+++++ + G S +++ Sbjct: 18 PPKLFKAFVLDADNLIPKIAPQAVKSAEIIEGDGG-VGTIKKIHLGEGSEYSYVKHKIDG 76 Query: 114 LDDDRHIISFRVVGGQ 129 +D D + S+ ++ G Sbjct: 77 IDKDNFVYSYSIIEGD 92 >2FLH-A nrPDB Length = 155 Score = 42.8 bits (99), Expect = 9e-05, Method: Composition-based stats. Identities = 22/99 (22%), Positives = 43/99 (43%), Gaps = 7/99 (7%) Query: 57 VRAVWPIV-RSFGN--PQRYKHFVRTCALAAGDGASVGSVREVTVVSGLPASTSTERLEM 113 + A+W ++ + F P+ H V+ L GDG VG++ + + S E + Sbjct: 15 LEALWAVLSKDFITVVPKVLPHIVKDVQLIEGDGG-VGTILIFNFLPEVSPSYQREEITE 73 Query: 114 LDDDRHIISFRVVGGQHR---LRNYRSVTSVTEFQPPAA 149 D+ H I +V+ G + L Y++ ++E + Sbjct: 74 FDESSHEIGLQVIEGGYLSQGLSYYKTTFKLSEIEEDKT 112 >5GTE-A nrPDB Length = 175 Score = 42.0 bits (97), Expect = 2e-04, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 43/120 (35%), Gaps = 10/120 (8%) Query: 57 VRAVWPIVRSFGNPQRYKHFVRTCALAAGDGASVGSVREVT-VVSGLPAST-STERLEML 114 W +++ F N + + C L G+ VG VR V ++ + + E+L L Sbjct: 34 PEQAWTLLKDFINLHKVMPSLSVCELVEGEANVVGCVRYVKGIMHPIEEEFWAKEKLVAL 93 Query: 115 DDDRHIISFRVVGGQHRLRNYRSVTSVTEFQPPAAGPGPAPPYCVVVESYVVDVPDGNTA 174 D+ +S+ + + Y T+ + G + S+ +G T Sbjct: 94 DNKN--MSYSYIFTEC-FTGYEDYTATMQIVEGPEHKGSRFDW-----SFQCKYIEGMTE 145 >1ICX-A nrPDB Length = 155 Score = 41.7 bits (96), Expect = 2e-04, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 43/98 (43%), Gaps = 4/98 (4%) Query: 55 APVRAVWPIVRSFGN--PQRYKHFVRTCALAAGDGASVGSVREVTVVSGLPASTSTERLE 112 AP + + + P+ + +++ + G+G G+++++ + S +L+ Sbjct: 14 APAKLYKALTKDSDEIVPKVIEP-IQSVEIVEGNGGP-GTIKKIIAIHDGHTSFVLHKLD 71 Query: 113 MLDDDRHIISFRVVGGQHRLRNYRSVTSVTEFQPPAAG 150 +D+ ++ ++GG+ + ++ ++ P G Sbjct: 72 AIDEANLTYNYSIIGGEGLDESLEKISYESKILPGPDG 109 >3CNW-A nrPDB Length = 148 Score = 41.3 bits (95), Expect = 3e-04, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 36/98 (36%), Gaps = 8/98 (8%) Query: 53 VAAPVRAVWPIVRSFGNPQRYKHFVRTCALAAGDGASVGSVREVTVVSGLPASTSTERLE 112 + VW ++ F + + ++ + L G G VR + G T ERLE Sbjct: 12 IFGSPEQVWQLIGGFNSLPDWLPYIPSSKLTEG-----GRVRHLANPDG---DTIIERLE 63 Query: 113 MLDDDRHIISFRVVGGQHRLRNYRSVTSVTEFQPPAAG 150 + +D ++ ++ + NY S V E Sbjct: 64 VFNDKERYYTYSIMNAPFPVTNYLSTIQVKEGTESNTS 101 >5AMW-A nrPDB Length = 162 Score = 40.5 bits (93), Expect = 5e-04, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 35/76 (46%), Gaps = 3/76 (3%) Query: 56 PVRAVWPIVRSFGN--PQRYKHFVRTCALAAGDGASVGSVREVTVVSGLPASTSTERLEM 113 P R + N P+ V+ + GDG VG+++++T G + T +++ Sbjct: 18 PPRLFKAFILDADNLIPKIAPQAVKCAEIIEGDGG-VGTIKKITFGEGSQFGSVTHKIDG 76 Query: 114 LDDDRHIISFRVVGGQ 129 +D + + S+ ++ G Sbjct: 77 IDKENFVYSYSLIEGD 92 >2K7H-A nrPDB Length = 157 Score = 37.4 bits (85), Expect = 0.005, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 43/111 (38%), Gaps = 5/111 (4%) Query: 55 APVRAVWPIVRSFGN--PQRYKHFVRTCALAAGDGASVGSVREVTVVSGLPASTSTERLE 112 AP +V N P+ F ++ G+G G+++++T + ++E Sbjct: 14 APATLYKALVTDADNVIPKALDSF-KSVENVEGNGGP-GTIKKITFLEDGETKFVLHKIE 71 Query: 113 MLDDDRHIISFRVVGGQHRLRNYRSVTSVTEFQPPAAGPGPAPPYCVVVES 163 +D+ S+ VVGG +T ++ G G A V E+ Sbjct: 72 SIDEANLGYSYSVVGGAALPDTAEKITFDSKLVAGPNG-GSAGKLTVKYET 121 >1XDF-A nrPDB Length = 157 Score = 37.0 bits (84), Expect = 0.005, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 37/76 (48%), Gaps = 4/76 (5%) Query: 55 APVRAVWPIVRSFGN--PQRYKHFVRTCALAAGDGASVGSVREVTVVSGLPASTSTERLE 112 AP R +V+ P+ + +++ G+G G+++++T++ G ++E Sbjct: 14 APARLYKALVKDADAIIPKAVEA-IQSIETVEGNGGP-GTIKKLTLIEGGETKYVLHKIE 71 Query: 113 MLDDDRHIISFRVVGG 128 +D+ ++ +VGG Sbjct: 72 AVDEANLRYNYSIVGG 87 >3E85-A nrPDB Length = 158 Score = 35.9 bits (81), Expect = 0.014, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 37/76 (48%), Gaps = 4/76 (5%) Query: 55 APVRAVWPIVRSFGN--PQRYKHFVRTCALAAGDGASVGSVREVTVVSGLPASTSTERLE 112 AP + +V P+ + +++ + G+G G+++++T + G + ++E Sbjct: 15 APAKLYKALVTDADIIIPKAVET-IQSVEIVEGNGGP-GTIKKLTFIEGGESKYVLHKIE 72 Query: 113 MLDDDRHIISFRVVGG 128 +D+ ++ +VGG Sbjct: 73 AIDEANLGYNYSIVGG 88 >1E09-A nrPDB Length = 159 Score = 35.1 bits (79), Expect = 0.020, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 32/76 (42%), Gaps = 3/76 (3%) Query: 56 PVRAVWPIVRSFGN--PQRYKHFVRTCALAAGDGASVGSVREVTVVSGLPASTSTERLEM 113 P R V N P+ ++ + GDG G+++++T G +++ Sbjct: 15 PPRLFKAFVLDADNLVPKIAPQAIKHSEILEGDGGP-GTIKKITFGEGSQYGYVKHKIDS 73 Query: 114 LDDDRHIISFRVVGGQ 129 +D + + S+ ++ G Sbjct: 74 IDKENYSYSYTLIEGD 89 >3IE5-A nrPDB Length = 165 Score = 34.7 bits (78), Expect = 0.026, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 34/85 (40%), Gaps = 3/85 (3%) Query: 75 HFVRTCALAAGDGASVGSVREVTVVSGLPASTSTERLEMLDDDRHIISFRVVGGQHRLRN 134 H ++ + GDG VG+V ++T V G P + + + +D + + G N Sbjct: 43 HVFKSGEIIEGDGG-VGTVTKITFVDGHPLTYMLHKFDEIDAANFYCKYTLFEGDVLRDN 101 Query: 135 YRSVTSVTEFQPPAAGPGPAPPYCV 159 V V E + A G G V Sbjct: 102 IEKV--VYEVKLEAVGGGSKGKITV 124 >4M9W-A nrPDB Length = 157 Score = 34.7 bits (78), Expect = 0.026, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Query: 77 VRTCALAAGDGASVGSVREVTVVSGLPASTSTERLEMLDDDRHIISFRVVGG 128 V++ + G+G G+++++T+V ++E +D+ + ++ VVGG Sbjct: 37 VKSVEIVEGNGGP-GTIKKLTIVEDGETKFILHKVESIDEANYAYNYSVVGG 87 >2BK0-A nrPDB Length = 154 Score = 34.7 bits (78), Expect = 0.029, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 45/115 (39%), Gaps = 10/115 (8%) Query: 70 PQRYKHFVRTCALAAGDGASVGSVREVTVVSGLPASTSTERLEMLDDDRHIISFRVVGGQ 129 P YK GDG G+++ +T+ G P +T T R++ ++ + + V+ G Sbjct: 36 PGAYKS-----VEIKGDGGP-GTLKIITLPDGGPITTMTLRIDGVNKEALTFDYSVIDGD 89 Query: 130 HRLRNYRSVTSVTEFQPPAAGPGPAPPYCVVVESYVVDVPDGN----TAEDTRMF 180 L S+ + P A G + VP+ N ++T +F Sbjct: 90 ILLGFIESIENHVVLVPTADGGSICKTTAIFHTKGDAVVPEENIKYANEQNTALF 144 >5MMU-A nrPDB Length = 158 Score = 34.0 bits (76), Expect = 0.044, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 32/76 (42%), Gaps = 3/76 (3%) Query: 56 PVRAVWPIVRSFGN--PQRYKHFVRTCALAAGDGASVGSVREVTVVSGLPASTSTERLEM 113 P R V N P+ ++ + G+G G+++++T G R++ Sbjct: 15 PSRLFKAFVLDADNLIPKIAPQAIKQAEILEGNGGP-GTIKKITFGEGSQYGYVKHRIDS 73 Query: 114 LDDDRHIISFRVVGGQ 129 +D+ + S+ ++ G Sbjct: 74 IDEASYSYSYTLIEGD 89 >1TW0-A nrPDB Length = 157 Score = 33.2 bits (74), Expect = 0.072, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 36/75 (48%), Gaps = 2/75 (2%) Query: 55 APVRAVWPIVRSFGN-PQRYKHFVRTCALAAGDGASVGSVREVTVVSGLPASTSTERLEM 113 AP + + + Q+ +++ L G+G VG+++++T G S ++++ Sbjct: 14 APAKLYKALTKDSDTIAQKIDGPIQSIELVEGNGG-VGTIKKITANEGDKTSFVLQKVDA 72 Query: 114 LDDDRHIISFRVVGG 128 +D+ + +VGG Sbjct: 73 IDEANLGYDYSIVGG 87 >6ALK-A nrPDB Length = 159 Score = 33.2 bits (74), Expect = 0.080, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 33/82 (40%), Gaps = 3/82 (3%) Query: 50 TQRVAAPVRAVWPIVRSFGN--PQRYKHFVRTCALAAGDGASVGSVREVTVVSGLPASTS 107 T V P R V N P+ +++ + G G G+++++T G + Sbjct: 9 TTTVITPARLFKAFVLDADNLIPKVAPQAIKSSEIIEGSGGP-GTIKKITFGEGSQFNYV 67 Query: 108 TERLEMLDDDRHIISFRVVGGQ 129 R++ +D+ + ++ G Sbjct: 68 KHRIDEIDNANFTYACTLIEGD 89 >1IFV-A nrPDB Length = 155 Score = 33.2 bits (74), Expect = 0.087, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 34/81 (41%), Gaps = 1/81 (1%) Query: 77 VRTCALAAGDGASVGSVREVTVVSGLPASTSTERLEMLDDDRHIISFRVVGGQHRLRNYR 136 +++ + G+G G+V+++T G S +++ +D+ ++ +VGG + Sbjct: 37 IQSVEIVEGNGGP-GTVKKITASHGGHTSYVLHKIDAIDEASFEYNYSIVGGTGLDESLE 95 Query: 137 SVTSVTEFQPPAAGPGPAPPY 157 +T ++ G Sbjct: 96 KITFESKLLSGPDGGSIGKIK 116 >1FM4-A nrPDB Length = 159 Score = 33.2 bits (74), Expect = 0.089, Method: Composition-based stats. Identities = 10/59 (16%), Positives = 26/59 (44%), Gaps = 1/59 (1%) Query: 70 PQRYKHFVRTCALAAGDGASVGSVREVTVVSGLPASTSTERLEMLDDDRHIISFRVVGG 128 P+ + + G+G G+++++ G P +R++ +D ++ V+ G Sbjct: 31 PKVAPQAISSVENIEGNGGP-GTIKKINFPEGFPFKYVKDRVDEVDHTNFKYNYSVIEG 88 >4BKC-A nrPDB Length = 159 Score = 32.8 bits (73), Expect = 0.11, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 35/87 (40%), Gaps = 4/87 (4%) Query: 44 TCTSLVTQRVAAPVRAVWPIVRSFGN--PQRYKHFVRTCALAAGDGASVGSVREVTVVSG 101 C + T + A R + N P+ + + G+G G++++++ G Sbjct: 4 NCETETTSVIPA-ARLFKAFILDGDNLFPKVAPQAISSVENIEGNGGP-GTIKKISFPEG 61 Query: 102 LPASTSTERLEMLDDDRHIISFRVVGG 128 P +R++ +D ++ V+ G Sbjct: 62 FPFKYVKDRVDEVDHTNFKYNYSVIEG 88 >2RDO-K nrPDB Length = 123 Score = 32.0 bits (71), Expect = 0.17, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 2/59 (3%) Query: 118 RHIISFRVVGGQHRLRNYRSVTSVTEFQPPAAGPGPAPPYCVVVESYVVDVPDGNTAED 176 R ++ +V+GG HR Y V + + A P V+++ VV G D Sbjct: 17 RRVMCIKVLGGSHR--RYAGVGDIIKITIKEAIPRGKVKKGDVLKAVVVRTKKGVRRPD 73 >2WQL-A nrPDB Length = 154 Score = 31.3 bits (69), Expect = 0.30, Method: Composition-based stats. Identities = 24/101 (23%), Positives = 38/101 (37%), Gaps = 6/101 (5%) Query: 83 AAGDGASVGSVREVTVVSGLPASTSTERLEMLDDDRHIISFRVVGGQHRLRNYRSVTSVT 142 GDG + G+VR +T+ G P +T T R + ++ + V+ G L S+ + Sbjct: 44 VKGDGGA-GTVRIITLPEGSPITTMTVRTDAVNKEALSYDSTVIDGDILLGFIESIETHM 102 Query: 143 EFQPPAAGPGPAPPYCVVVESYVVDVPDGNTAEDTRMFTDT 183 P A G + VP+ N F D Sbjct: 103 VVVPTADGGSITKTTAIFHTKGDAVVPEENIK-----FADA 138 >4C9I-A nrPDB Length = 162 Score = 31.3 bits (69), Expect = 0.31, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 30/80 (37%), Gaps = 3/80 (3%) Query: 57 VRAVWPIVRSFGN--PQRYKHFVRTCALAAGDGASVGSVREVTVVSGLPASTSTERLEML 114 + V N P+ V+ + GDG G+++++T G ++ + Sbjct: 19 PKLFKAFVLDADNLIPKIAPQAVKCAEILEGDGGP-GTIKKITFGEGSHYGYVKHKIHSI 77 Query: 115 DDDRHIISFRVVGGQHRLRN 134 D H S+ ++ G N Sbjct: 78 DKVNHTYSYSLIEGDALSEN 97 >5XQL-A nrPDB Length = 291 Score = 29.3 bits (64), Expect = 1.2, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 19/34 (55%), Gaps = 2/34 (5%) Query: 48 LVTQRVAAPVRAVWPIVRS--FGNPQRYKHFVRT 79 L +R+ P+ A+ + R +PQR +HF++ Sbjct: 73 LALRRLDVPLEAIDRLKRDGALDDPQRLRHFLQR 106 >1A5Z-A nrPDB Length = 319 Score = 28.9 bits (63), Expect = 1.6, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 22/47 (46%) Query: 75 HFVRTCALAAGDGASVGSVREVTVVSGLPASTSTERLEMLDDDRHII 121 F R + AGD A + V V +G+P RL++L + ++ Sbjct: 50 PFTRRANIYAGDYADLKGSDVVIVAAGVPQKPGETRLQLLGRNARVM 96 >5A5G-A nrPDB Length = 558 Score = 28.9 bits (63), Expect = 1.7, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 65 RSFGNPQRYKHFVRTCALAAGDGASVGSVREVTVVSGLPASTSTERLEMLDDDRHIIS 122 + G P + VR +++AG G V ++ + GLP + E++++ D++ +IS Sbjct: 500 KKLGRPSGFNITVRDVSVSAGAGFIVAVTGDIMKMPGLPKVPAAEKIDV--DEKGVIS 555 >5NON-A nrPDB Length = 165 Score = 28.6 bits (62), Expect = 2.2, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 85 GDGASVGSVREVTVVSGLPASTSTERLEMLDDDRHIISFRVVGGQHR 131 GDG VG++ ++T V G E+ ++D++ + +++ G + Sbjct: 56 GDGG-VGTILDMTFVPGEFPHEYKEKFILVDNEHRLKKVQMIEGGYL 101 >2VNE-A nrPDB Length = 201 Score = 28.6 bits (62), Expect = 2.2, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 85 GDGASVGSVREVTVVSGLPASTSTERLEMLDDDRHIISFRVVGGQHR 131 GDG VG++ ++T V G E+ ++D++ + +++ G + Sbjct: 72 GDGG-VGTILDMTFVPGEFPHEYKEKFILVDNEHRLKKVQMIEGGYL 117 >2ZYL-A nrPDB Length = 386 Score = 28.2 bits (61), Expect = 2.3, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 9/67 (13%) Query: 130 HRLRNYRSVTSVTEFQPPAAGPGPAPPYCVVVESYVVDVPDGNTAEDT----RMFTDTVV 185 +R NY+S + + P + V+VE P G + E T R+FT+ V Sbjct: 244 NRYGNYKSESILINCHYPVTQNSFVLQWGVIVEK-----PKGMSEEMTDKLSRVFTEGVS 298 Query: 186 KLNLQML 192 K LQ + Sbjct: 299 KGFLQDV 305 >3MRU-A nrPDB Length = 490 Score = 28.2 bits (61), Expect = 2.5, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 17/43 (39%) Query: 142 TEFQPPAAGPGPAPPYCVVVESYVVDVPDGNTAEDTRMFTDTV 184 F A PG VV+++++ VP N D D + Sbjct: 58 NVFIKKPATPGMENKKGVVLQAHIDMVPQKNEDTDHDFTQDPI 100 >5GWA-A nrPDB Length = 280 Score = 27.0 bits (58), Expect = 5.8, Method: Composition-based stats. Identities = 22/137 (16%), Positives = 43/137 (31%), Gaps = 11/137 (8%) Query: 58 RAVWPIVRSFGNPQRY---KHFVRTCALAAGDGASVGSVREVTVVSGLPASTS---TERL 111 ++ K FV+ L +++ L S S + Sbjct: 52 HLALAVLDKLDKENISVDKKLFVKKSDLQPNTW---SPLKDKYPNGNLELSFSEIIKSTV 108 Query: 112 EMLDDDRHIISFRVVGGQHRLRNYRSVTSVTEFQPPAAGPGPAPPYCVVVESYVVDVPDG 171 D++ I FR VGG +++ N+ S V A + V ++ PD Sbjct: 109 SHSDNNGCDILFRFVGGTNKVHNFISKLGVKNISIKATEEEMHKAWNVQYTNWTT--PDA 166 Query: 172 NTAEDTRMFTDTVVKLN 188 + + + ++ N Sbjct: 167 TVQLLKKFYKNEILSKN 183 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.308 0.128 0.343 Lambda K H 0.267 0.0394 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 7,479,938 Number of Sequences: 36641 Number of extensions: 263948 Number of successful extensions: 867 Number of sequences better than 10.0: 44 Number of HSP's better than 10.0 without gapping: 46 Number of HSP's successfully gapped in prelim test: 25 Number of HSP's that attempted gapping in prelim test: 782 Number of HSP's gapped (non-prelim): 72 length of query: 207 length of database: 10,336,785 effective HSP length: 93 effective length of query: 114 effective length of database: 6,929,172 effective search space: 789925608 effective search space used: 789925608 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 56 (26.2 bits)