BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q5VZV1 (264 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 4MTL-A nrPDB 499 e-142 4LEC-A nrPDB 97 8e-21 4QPN-A nrPDB 89 2e-18 4LG1-A nrPDB 67 9e-12 3DMF-A nrPDB 35 0.031 4M36-A nrPDB 32 0.19 5EKU-A nrPDB 32 0.27 1F3L-A nrPDB 31 0.58 6CU3-A nrPDB 31 0.71 4QHP-A nrPDB 30 0.76 3CJR-A nrPDB 30 0.77 3X0D-A nrPDB 30 1.5 1YUB-A nrPDB 29 1.9 1XA6-A nrPDB 29 1.9 4RYL-A nrPDB 29 2.5 1G6Q-1 nrPDB 29 2.5 5DST-A nrPDB 28 3.1 1JL5-A nrPDB 28 3.1 5XRF-A nrPDB 28 3.8 5VAE-B nrPDB 28 4.4 4UXV-A nrPDB 28 4.7 3M70-A nrPDB 28 5.5 5IS8-A nrPDB 28 5.9 3B3J-A nrPDB 27 6.1 4IKP-A nrPDB 27 6.2 3SM3-A nrPDB 27 9.4 >4MTL-A nrPDB Length = 244 Score = 499 bits (1285), Expect = e-142, Method: Compositional matrix adjust. Identities = 243/243 (100%), Positives = 243/243 (100%) Query: 22 GGWLEAEKKGAPQKDSTGGVLEESNKIEPSLHSLQKFVPTDYASYTQEHYRFAGKEIVIQ 81 GGWLEAEKKGAPQKDSTGGVLEESNKIEPSLHSLQKFVPTDYASYTQEHYRFAGKEIVIQ Sbjct: 2 GGWLEAEKKGAPQKDSTGGVLEESNKIEPSLHSLQKFVPTDYASYTQEHYRFAGKEIVIQ 61 Query: 82 ESIESYGAVVWPGAMALCQYLEEHAEELNFQDAKILEIGAGPGLVSIVASILGAQVTATD 141 ESIESYGAVVWPGAMALCQYLEEHAEELNFQDAKILEIGAGPGLVSIVASILGAQVTATD Sbjct: 62 ESIESYGAVVWPGAMALCQYLEEHAEELNFQDAKILEIGAGPGLVSIVASILGAQVTATD 121 Query: 142 LPDVLGNLQYNLLKNTLQCTAHLPEVKELVWGEDLDKNFPKSAFYYDYVLASDVVYHHYF 201 LPDVLGNLQYNLLKNTLQCTAHLPEVKELVWGEDLDKNFPKSAFYYDYVLASDVVYHHYF Sbjct: 122 LPDVLGNLQYNLLKNTLQCTAHLPEVKELVWGEDLDKNFPKSAFYYDYVLASDVVYHHYF 181 Query: 202 LDKLLTTMVYLSQPGTVLLWANKFRFSTDYEFLDKFKQVFDTTLLAEYPESSVKLFKGIL 261 LDKLLTTMVYLSQPGTVLLWANKFRFSTDYEFLDKFKQVFDTTLLAEYPESSVKLFKGIL Sbjct: 182 LDKLLTTMVYLSQPGTVLLWANKFRFSTDYEFLDKFKQVFDTTLLAEYPESSVKLFKGIL 241 Query: 262 KWD 264 KWD Sbjct: 242 KWD 244 >4LEC-A nrPDB Length = 212 Score = 96.7 bits (239), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 66/191 (34%), Positives = 96/191 (50%), Gaps = 7/191 (3%) Query: 71 YRFAGKEIVIQESIESYG--AVVWPGAMALCQYLEEHAEELNFQDAKILEIGAGPGLVSI 128 + FA I I++ G AVVW A+ L YLE A EL + A +E+GAG GLV I Sbjct: 18 FSFANHTIQIRQDWRHLGVAAVVWDAAIVLSTYLEMGAVELRGRSA--VELGAGTGLVGI 75 Query: 129 VASILGAQVTATDLPDVLGNLQYNLLKNTLQCTAHLPEVKELVWGEDLDKNFPKSAFYYD 188 VA++LGA VT TD L L+ N+ N VKEL WG++L P +D Sbjct: 76 VAALLGAHVTITDRKVALEFLKSNVQANLPPHIQTKTVVKELTWGQNLGSFSPGE---FD 132 Query: 189 YVLASDVVYHHYFLDKLLTTMVYLSQPGTVLLWANKFRFSTDYEFLDKFKQVFDTTLLAE 248 +L +D++Y LL T+ +L +V+L A + R+ D FL ++ F + Sbjct: 133 LILGADIIYLEETFTDLLQTLEHLCSNHSVILLACRIRYERDNNFLAMLERQFTVRKVHY 192 Query: 249 YPESSVKLFKG 259 PE V +++ Sbjct: 193 DPEKDVHIYEA 203 >4QPN-A nrPDB Length = 227 Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 63/200 (31%), Positives = 102/200 (51%), Gaps = 14/200 (7%) Query: 65 SYTQE-HYRFAGKEIVIQESIES---YGAVVWPGAMALCQYLEEHAEELNFQDAKILEIG 120 SY+++ + F G + I ++ S A VW A++LC Y E ++ ++F+ K++E+G Sbjct: 27 SYSEKSQFCFCGHVLTITQNFGSRLGVAARVWDAALSLCNYFE--SQNVDFRGKKVIELG 84 Query: 121 AGPGLVSIVASILGAQVTATDLPDVLGNLQYNLLKNTLQCTAHLPEVKELVWGEDLDKNF 180 AG G+V I+A++ G VT TDLP L +Q N+ N +V+ L WG D F Sbjct: 85 AGTGIVGILAALQGGDVTITDLPLALEQIQGNVQANV--PAGGQAQVRALSWGID-HHVF 141 Query: 181 PKSAFYYDYVLASDVVYHHYFLDKLLTTMVYLSQPGTVLLWANKFR--FSTDYEFLDKFK 238 P + YD VL +D+VY LL T+ +L +P + A+K R T+ F Sbjct: 142 PAN---YDLVLGADIVYLEPTFPLLLGTLQHLCRPHGTIYLASKMRKEHGTESFFQHLLP 198 Query: 239 QVFDTTLLAEYPESSVKLFK 258 Q F L + +V +++ Sbjct: 199 QHFQLELAQRDEDENVNIYR 218 >4LG1-A nrPDB Length = 224 Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 47/145 (32%), Positives = 78/145 (53%), Gaps = 13/145 (8%) Query: 88 GAVVWPGAMALCQYLE------EHAEELNFQDAKILEIGAGPGLVSIVASILGAQVTATD 141 G VVW A+ L +YLE + A L+ + +LE+G+G G V ++A+ LGA V TD Sbjct: 34 GCVVWDAAIVLSKYLETPEFSGDGAHALSRR--SVLELGSGTGAVGLMAATLGADVVVTD 91 Query: 142 LPDVLGNLQYNLLKNTLQCTAHLPEVKELVWGEDLDKNFPKSAFYYDYVLASDVVYHHYF 201 L ++ L+ N+ N T + + K L WGE+++ FP D++L +D +Y+ Sbjct: 92 LEELQDLLKMNINMNKHLVTGSV-QAKVLKWGEEIE-GFPSPP---DFILMADCIYYEES 146 Query: 202 LDKLLTTMVYLSQPGTVLLWANKFR 226 L+ LL T+ +S T ++ + R Sbjct: 147 LEPLLKTLKDISGFETCIICCYEQR 171 >3DMF-A nrPDB Length = 381 Score = 35.0 bits (79), Expect = 0.031, Method: Compositional matrix adjust. Identities = 46/164 (28%), Positives = 72/164 (43%), Gaps = 15/164 (9%) Query: 91 VWPGAMALCQYLEEHAEELNFQDAKILEIGAGPGLVSIVASILGAQVTAT--DLPDVLGN 148 V P ++ L + L+E + ++L++GAG G +++ + +GA+V DL VL + Sbjct: 212 VDPASLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARMGAEVVGVEDDLASVL-S 270 Query: 149 LQYNLLKNTLQCTAHLPEVKELVWGE-DLDKNFPKSAFYYDYVLASDVVYHHYFLDKLLT 207 LQ L N L+ A +V E + E D F+ + DV F++ Sbjct: 271 LQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFHVGGAVILDVA--QAFVN---V 325 Query: 208 TMVYLSQPGTVLLWANKFRFSTDYEFL--DKFKQVFDTTLLAEY 249 L G L +N F YE L +KF F T +AEY Sbjct: 326 AAARLRPGGVFFLVSNPF---LKYEPLLEEKFG-AFQTLKVAEY 365 >4M36-A nrPDB Length = 343 Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 15/74 (20%) Query: 116 ILEIGAGPGLVSIVASILGAQ-VTATDLPDVLGNL-QYNLLKNTLQC------------- 160 +LEIGAG GL+S++A+ LGA+ V A + + L L + N+ N ++ Sbjct: 64 VLEIGAGSGLLSLMAAKLGAKWVVAVEGSEELAKLARENIRANNMEHQVKVLHMMSTELK 123 Query: 161 TAHLPEVKELVWGE 174 + HLPE +++ E Sbjct: 124 SKHLPEPPDVLLSE 137 >5EKU-A nrPDB Length = 390 Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 15/74 (20%) Query: 116 ILEIGAGPGLVSIVASILGAQ-VTATDLPDVLGNL-QYNLLKNTLQCTA----------- 162 +LEIGAG GL+S++A+ LGA+ V A + + L L + N+ N ++ Sbjct: 99 VLEIGAGSGLLSLMAAKLGAKWVVAVEGSEELAKLARENIRANNMEHQVKVLHMMSTELK 158 Query: 163 --HLPEVKELVWGE 174 HLPE +++ E Sbjct: 159 PKHLPEPPDVLLSE 172 >1F3L-A nrPDB Length = 321 Score = 30.8 bits (68), Expect = 0.58, Method: Compositional matrix adjust. Identities = 17/53 (32%), Positives = 33/53 (62%), Gaps = 5/53 (9%) Query: 111 FQDAKILEIGAGPGLVSIVASILGA-QVTATDLPDVLGN----LQYNLLKNTL 158 F+D +L++G G G++S+ A+ GA +V A D ++L ++ N L++T+ Sbjct: 44 FKDKVVLDVGCGTGILSMFAAKAGAKKVIAVDQSEILYQAMDIIRLNKLEDTI 96 >6CU3-A nrPDB Length = 336 Score = 30.8 bits (68), Expect = 0.71, Method: Compositional matrix adjust. Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 12/67 (17%) Query: 111 FQDAKILEIGAGPGLVSIVASILGA-QVTATDLPDVLGNLQ-----------YNLLKNTL 158 F+D +L+IG G G++ + A+ GA +V D+ D++ + L+K + Sbjct: 50 FKDKVVLDIGCGTGILCLFAAKAGAKRVIGIDMSDIIDKARQIVSDNGYSHVIELIKGKV 109 Query: 159 QCTAHLP 165 + A LP Sbjct: 110 EDIAQLP 116 >4QHP-A nrPDB Length = 870 Score = 30.4 bits (67), Expect = 0.76, Method: Compositional matrix adjust. Identities = 27/93 (29%), Positives = 37/93 (39%), Gaps = 3/93 (3%) Query: 42 LEESNKIEPSLHSLQKFVPTDYASYTQEHYRFAGKEIVIQESIESYGAVVWPGAMALCQY 101 LE NK + S + VP +A YRF +++ + A A LC Sbjct: 777 LENPNKARSLIGSFSRNVPHFHAE-DGSGYRFIADKVIEIDRFNPQVAARLVQAFNLCNK 835 Query: 102 LEEHAEELNFQDAKILEIGAGPGLVSIVASILG 134 LE H + L Q + I A GL V I+G Sbjct: 836 LEPHRKNLVKQ--ALQRIRAQEGLSKDVGEIVG 866 >3CJR-A nrPDB Length = 254 Score = 30.4 bits (67), Expect = 0.77, Method: Compositional matrix adjust. Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 1/46 (2%) Query: 115 KILEIGAGPGLVSIVASILGAQVTATDL-PDVLGNLQYNLLKNTLQ 159 K+L++G G G+++I A LG + D+ P VL + N +N ++ Sbjct: 123 KVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVR 168 >3X0D-A nrPDB Length = 655 Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust. Identities = 15/43 (34%), Positives = 29/43 (67%), Gaps = 1/43 (2%) Query: 116 ILEIGAGPGLVSIVASILGA-QVTATDLPDVLGNLQYNLLKNT 157 +L+IG G GL+S++A+ GA +VTA ++ +G+ ++ N+ Sbjct: 76 VLDIGTGTGLLSLMAAREGADKVTALEVFKPMGDCARHITSNS 118 >1YUB-A nrPDB Length = 245 Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust. Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 12/98 (12%) Query: 102 LEEHAEELNFQDA-KILEIGAGPGLVSIVASILGAQVTATDLPDVLGNLQYNLLKNTLQC 160 L + ++LN ++ + EIG G G ++ + + QVT+ +L L NL LK + Sbjct: 18 LNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLKLNTRV 77 Query: 161 TAHLPEVKELVWGEDLDKNFPKSAFYYDYVLASDVVYH 198 T L+ + L FP Y + ++ YH Sbjct: 78 T--------LIHQDILQFQFPNKQ---RYKIVGNIPYH 104 >1XA6-A nrPDB Length = 466 Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust. Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 17/144 (11%) Query: 1 MDVCLSSAQQPGRRGEGLSSPGGWLE-------AEKKGAPQKDSTGGVLEESNKIEPSLH 53 +D+C+ + G + EGL G+ E A + + D + V + N I +L Sbjct: 292 VDICIREIEARGLKSEGLYRVSGFTEHIEDVKMAFDRDGEKADISANVYPDINIITGALK 351 Query: 54 SLQKFVPTDYASY-TQEHYRFAGKEIVIQESIESYGAVVW---PGAMALCQYLEEHAEEL 109 + +P +Y T + A K E +E+ V+ P +YL H +++ Sbjct: 352 LYFRDLPIPVITYDTYSKFIDAAKISNADERLEAVHEVLMLLPPAHYETLRYLMIHLKKV 411 Query: 110 ------NFQDAKILEIGAGPGLVS 127 NF +A+ L I GP L+ Sbjct: 412 TMNEKDNFMNAENLGIVFGPTLMR 435 >4RYL-A nrPDB Length = 340 Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust. Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 11/66 (16%) Query: 111 FQDAKILEIGAGPGLVSIVASILGA-QVTATDLPDVLGN----LQYNLLKNTLQCT---- 161 F+D +L++G G G++S+ A+ GA +V D ++L ++ N L++T+ Sbjct: 63 FKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKI 122 Query: 162 --AHLP 165 HLP Sbjct: 123 EEVHLP 128 >1G6Q-1 nrPDB Length = 328 Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust. Identities = 12/37 (32%), Positives = 24/37 (64%), Gaps = 1/37 (2%) Query: 111 FQDAKILEIGAGPGLVSIVASILGAQ-VTATDLPDVL 146 F+D +L++G G G++S+ A+ GA+ V D+ ++ Sbjct: 37 FKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMSSII 73 >5DST-A nrPDB Length = 332 Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust. Identities = 10/26 (38%), Positives = 20/26 (76%) Query: 111 FQDAKILEIGAGPGLVSIVASILGAQ 136 F+D +L++G+G G++S+ A+ GA+ Sbjct: 48 FKDKVVLDVGSGTGILSMFAAKAGAK 73 >1JL5-A nrPDB Length = 454 Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 12/85 (14%) Query: 97 ALCQYLEEHAEELNFQDAKILEIGAGPGLVSIVASILGAQVTATDLPDVLGNL--QYNLL 154 +LC L EELN + K++E+ A P + + + +LP L L +YN L Sbjct: 311 SLCD-LPPSLEELNVSNNKLIELPALPPRLERLIASFNHLAEVPELPQNLKQLHVEYNPL 369 Query: 155 K---------NTLQCTAHLPEVKEL 170 + L+ +HL EV EL Sbjct: 370 REFPDIPESVEDLRMNSHLAEVPEL 394 >5XRF-A nrPDB Length = 242 Score = 28.1 bits (61), Expect = 3.8, Method: Compositional matrix adjust. Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 4/47 (8%) Query: 126 VSIVASILGAQVTATD---LPDVLGNLQYNLLKNTLQCTAHLPEVKE 169 + V ++G + ++ LPDV NLL N ++C AH P+V E Sbjct: 122 IGSVCRVMGWGIMSSTKDILPDVPHCANINLL-NYMECVAHYPDVPE 167 >5VAE-B nrPDB Length = 159 Score = 28.1 bits (61), Expect = 4.4, Method: Compositional matrix adjust. Identities = 23/98 (23%), Positives = 43/98 (43%), Gaps = 15/98 (15%) Query: 168 KELVWGEDLDKNFPKSAFYYDYVLASDVVYHH----YFLDKLLTTMVYLSQPGTVLLWAN 223 KE+ WGE + K+ + Y+ S +++H YF +KL+ + T+ W++ Sbjct: 7 KEIYWGELRGASISKTRKDFTYLYGSTIIFHSPDQVYFENKLIAS------GQTIHEWSS 60 Query: 224 KFRFSTDYE-----FLDKFKQVFDTTLLAEYPESSVKL 256 + + D + L + + T + YP SV L Sbjct: 61 SWNYQGDRQVPSLPLLKRGRSYSLTRDMTSYPSESVFL 98 >4UXV-A nrPDB Length = 545 Score = 27.7 bits (60), Expect = 4.7, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 9/48 (18%) Query: 160 CTAHLPEVKELVWGEDLDKNFPKSAFYYDYVLASDVVYHHYFLDKLLT 207 TAH+P+V+EL++ D ++N K Y + A+ V+ H +D LLT Sbjct: 58 VTAHMPKVEELLY--DAEENADK----YRFKKANQVLVH---IDDLLT 96 >3M70-A nrPDB Length = 286 Score = 27.7 bits (60), Expect = 5.5, Method: Compositional matrix adjust. Identities = 12/28 (42%), Positives = 18/28 (64%) Query: 114 AKILEIGAGPGLVSIVASILGAQVTATD 141 K+L++G G G S+ S+LG VT+ D Sbjct: 122 CKVLDLGCGQGRNSLYLSLLGYDVTSWD 149 >5IS8-A nrPDB Length = 381 Score = 27.7 bits (60), Expect = 5.9, Method: Compositional matrix adjust. Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 3/35 (8%) Query: 102 LEEHAEELNFQDAKILEIGAGPGLVSIVASILGAQ 136 L+ H + F+D +L++G G G++S A+ GA+ Sbjct: 52 LQNHTD---FKDKIVLDVGCGSGILSFFAAQAGAR 83 >3B3J-A nrPDB Length = 480 Score = 27.3 bits (59), Expect = 6.1, Method: Compositional matrix adjust. Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 3/35 (8%) Query: 102 LEEHAEELNFQDAKILEIGAGPGLVSIVASILGAQ 136 L+ H + F+D +L++G G G++S A+ GA+ Sbjct: 151 LQNHTD---FKDKIVLDVGCGSGILSFFAAQAGAR 182 >4IKP-A nrPDB Length = 341 Score = 27.3 bits (59), Expect = 6.2, Method: Compositional matrix adjust. Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 3/35 (8%) Query: 102 LEEHAEELNFQDAKILEIGAGPGLVSIVASILGAQ 136 L+ H + F+D +L++G G G++S A+ GA+ Sbjct: 38 LQNHTD---FKDKIVLDVGCGSGILSFFAAQAGAR 69 >3SM3-A nrPDB Length = 235 Score = 26.9 bits (58), Expect = 9.4, Method: Compositional matrix adjust. Identities = 12/31 (38%), Positives = 19/31 (61%) Query: 112 QDAKILEIGAGPGLVSIVASILGAQVTATDL 142 +D +IL+IG G G +S+ + G VT D+ Sbjct: 30 EDDEILDIGCGSGKISLELASKGYSVTGIDI 60 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4MTL-A nrPDB 411 e-115 4LEC-A nrPDB 271 2e-73 4QPN-A nrPDB 266 4e-72 4LG1-A nrPDB 191 2e-49 Sequences not found previously or not previously below threshold: 4PWY-A nrPDB 48 4e-06 4M36-A nrPDB 39 0.002 5EKU-A nrPDB 39 0.002 3MGG-A nrPDB 38 0.004 1G6Q-1 nrPDB 37 0.009 3EGE-A nrPDB 36 0.017 3DMF-A nrPDB 35 0.024 6CU3-A nrPDB 35 0.039 3CJR-A nrPDB 34 0.100 3Q7E-A nrPDB 34 0.10 1F3L-A nrPDB 34 0.10 1WS6-A nrPDB 33 0.12 3X0D-A nrPDB 33 0.15 6OGN-A nrPDB 33 0.16 4RYL-A nrPDB 32 0.22 5DST-A nrPDB 32 0.40 5BP9-A nrPDB 32 0.40 5TR7-A nrPDB 31 0.45 3TK8-A nrPDB 31 0.45 5WMM-A nrPDB 31 0.61 1U0N-C nrPDB 31 0.68 4P7C-A nrPDB 30 0.84 5LV5-A nrPDB 30 0.91 5EGS-A nrPDB 30 0.91 5NNP-A nrPDB 30 0.94 4KRI-A nrPDB 30 0.99 4LWO-B nrPDB 29 1.7 1DUS-A nrPDB 29 2.4 2IP2-A nrPDB 29 2.8 2B3T-A nrPDB 29 2.9 5K98-A nrPDB 29 3.3 2GS9-A nrPDB 29 3.3 4QJV-B nrPDB 28 3.6 1JJO-C nrPDB 28 3.6 2YBQ-A nrPDB 28 3.8 1WY7-A nrPDB 28 4.2 5NTF-A nrPDB 28 5.1 5FQM-A nrPDB 28 5.2 5MRE-55 nrPDB 27 5.9 1ZS9-A nrPDB 27 9.8 2DEI-A nrPDB 27 10.0 >4MTL-A nrPDB Length = 244 Score = 411 bits (1055), Expect = e-115, Method: Composition-based stats. Identities = 243/243 (100%), Positives = 243/243 (100%) Query: 22 GGWLEAEKKGAPQKDSTGGVLEESNKIEPSLHSLQKFVPTDYASYTQEHYRFAGKEIVIQ 81 GGWLEAEKKGAPQKDSTGGVLEESNKIEPSLHSLQKFVPTDYASYTQEHYRFAGKEIVIQ Sbjct: 2 GGWLEAEKKGAPQKDSTGGVLEESNKIEPSLHSLQKFVPTDYASYTQEHYRFAGKEIVIQ 61 Query: 82 ESIESYGAVVWPGAMALCQYLEEHAEELNFQDAKILEIGAGPGLVSIVASILGAQVTATD 141 ESIESYGAVVWPGAMALCQYLEEHAEELNFQDAKILEIGAGPGLVSIVASILGAQVTATD Sbjct: 62 ESIESYGAVVWPGAMALCQYLEEHAEELNFQDAKILEIGAGPGLVSIVASILGAQVTATD 121 Query: 142 LPDVLGNLQYNLLKNTLQCTAHLPEVKELVWGEDLDKNFPKSAFYYDYVLASDVVYHHYF 201 LPDVLGNLQYNLLKNTLQCTAHLPEVKELVWGEDLDKNFPKSAFYYDYVLASDVVYHHYF Sbjct: 122 LPDVLGNLQYNLLKNTLQCTAHLPEVKELVWGEDLDKNFPKSAFYYDYVLASDVVYHHYF 181 Query: 202 LDKLLTTMVYLSQPGTVLLWANKFRFSTDYEFLDKFKQVFDTTLLAEYPESSVKLFKGIL 261 LDKLLTTMVYLSQPGTVLLWANKFRFSTDYEFLDKFKQVFDTTLLAEYPESSVKLFKGIL Sbjct: 182 LDKLLTTMVYLSQPGTVLLWANKFRFSTDYEFLDKFKQVFDTTLLAEYPESSVKLFKGIL 241 Query: 262 KWD 264 KWD Sbjct: 242 KWD 244 >4LEC-A nrPDB Length = 212 Score = 271 bits (694), Expect = 2e-73, Method: Composition-based stats. Identities = 66/191 (34%), Positives = 96/191 (50%), Gaps = 7/191 (3%) Query: 71 YRFAGKEIVIQESIESYG--AVVWPGAMALCQYLEEHAEELNFQDAKILEIGAGPGLVSI 128 + FA I I++ G AVVW A+ L YLE A EL + A +E+GAG GLV I Sbjct: 18 FSFANHTIQIRQDWRHLGVAAVVWDAAIVLSTYLEMGAVELRGRSA--VELGAGTGLVGI 75 Query: 129 VASILGAQVTATDLPDVLGNLQYNLLKNTLQCTAHLPEVKELVWGEDLDKNFPKSAFYYD 188 VA++LGA VT TD L L+ N+ N VKEL WG++L P +D Sbjct: 76 VAALLGAHVTITDRKVALEFLKSNVQANLPPHIQTKTVVKELTWGQNLGSFSPGE---FD 132 Query: 189 YVLASDVVYHHYFLDKLLTTMVYLSQPGTVLLWANKFRFSTDYEFLDKFKQVFDTTLLAE 248 +L +D++Y LL T+ +L +V+L A + R+ D FL ++ F + Sbjct: 133 LILGADIIYLEETFTDLLQTLEHLCSNHSVILLACRIRYERDNNFLAMLERQFTVRKVHY 192 Query: 249 YPESSVKLFKG 259 PE V +++ Sbjct: 193 DPEKDVHIYEA 203 >4QPN-A nrPDB Length = 227 Score = 266 bits (681), Expect = 4e-72, Method: Composition-based stats. Identities = 63/201 (31%), Positives = 102/201 (50%), Gaps = 14/201 (6%) Query: 65 SYTQE-HYRFAGKEIVIQESIES---YGAVVWPGAMALCQYLEEHAEELNFQDAKILEIG 120 SY+++ + F G + I ++ S A VW A++LC Y E ++ ++F+ K++E+G Sbjct: 27 SYSEKSQFCFCGHVLTITQNFGSRLGVAARVWDAALSLCNYFE--SQNVDFRGKKVIELG 84 Query: 121 AGPGLVSIVASILGAQVTATDLPDVLGNLQYNLLKNTLQCTAHLPEVKELVWGEDLDKNF 180 AG G+V I+A++ G VT TDLP L +Q N+ N +V+ L WG D F Sbjct: 85 AGTGIVGILAALQGGDVTITDLPLALEQIQGNVQANV--PAGGQAQVRALSWGID-HHVF 141 Query: 181 PKSAFYYDYVLASDVVYHHYFLDKLLTTMVYLSQPGTVLLWANKFR--FSTDYEFLDKFK 238 P + YD VL +D+VY LL T+ +L +P + A+K R T+ F Sbjct: 142 PAN---YDLVLGADIVYLEPTFPLLLGTLQHLCRPHGTIYLASKMRKEHGTESFFQHLLP 198 Query: 239 QVFDTTLLAEYPESSVKLFKG 259 Q F L + +V +++ Sbjct: 199 QHFQLELAQRDEDENVNIYRA 219 >4LG1-A nrPDB Length = 224 Score = 191 bits (485), Expect = 2e-49, Method: Composition-based stats. Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 25/200 (12%) Query: 75 GKEIVIQE-SIESYGAVVWPGAMALCQYLE------EHAEELNFQDAKILEIGAGPGLVS 127 G + +Q+ S G VVW A+ L +YLE + A L+ + +LE+G+G G V Sbjct: 20 GTVLRLQQYSSGGVGCVVWDAAIVLSKYLETPEFSGDGAHALSRR--SVLELGSGTGAVG 77 Query: 128 IVASILGAQVTATDLPDVLGNLQYNLLKNTLQCTAHLPEVKELVWGEDLDKNFPKSAFYY 187 ++A+ LGA V TDL ++ L+ N+ N T + + K L WGE+++ FP Sbjct: 78 LMAATLGADVVVTDLEELQDLLKMNINMNKHLVTGSV-QAKVLKWGEEIE-GFPSPP--- 132 Query: 188 DYVLASDVVYHHYFLDKLLTTMVYLSQPGTVLLWANKFRF-----STDYEFLDKFKQVFD 242 D++L +D +Y+ L+ LL T+ +S T ++ + R + ++ + + FD Sbjct: 133 DFILMADCIYYEESLEPLLKTLKDISGFETCIICCYEQRTMGKNPEIEKKYFELLQLDFD 192 Query: 243 TTLL------AEYPESSVKL 256 + EY + + Sbjct: 193 FEKIPLEKHDEEYRSEDIHI 212 >4PWY-A nrPDB Length = 264 Score = 47.8 bits (112), Expect = 4e-06, Method: Composition-based stats. Identities = 36/187 (19%), Positives = 72/187 (38%), Gaps = 11/187 (5%) Query: 83 SIESYGAV-VWPGAMALCQYLEEHAEELNFQDAKILEIGAG-PGLVSIVASILG--AQVT 138 S ++ G V +WP L Y F+ + E+G G L ++ +I +V Sbjct: 59 SFDNTGNVCIWPSEEVLAYYC--LKHNNIFRALAVCELGGGMTCLAGLMVAISADVKEVL 116 Query: 139 ATD-LPDVLGNLQYNLLKNTLQCTAHLPEVKE--LVWGEDLDKNFPKSAFYYDYVLASDV 195 TD + N+Q + +N ++ L W D + + + ++D V+ +D Sbjct: 117 LTDGNEKAIRNVQDIITRNQKAGVFKTQKISSCFLRW--DNETDVSQLEGHFDIVMCADC 174 Query: 196 VYHHYFLDKLLTTMVYLSQPGTVLLWANKFRFSTDYEFLDKFKQVFDTTLLAEYPESSVK 255 ++ + L+ + L QP + R +T +F + ++ E + + Sbjct: 175 LFLDQYRASLVDAIKRLLQPRGKAMVFAPRRGNTLNQFCNLAEKAGFCIQRHENYDEHIS 234 Query: 256 LFKGILK 262 F LK Sbjct: 235 NFHSKLK 241 >4M36-A nrPDB Length = 343 Score = 39.3 bits (90), Expect = 0.002, Method: Composition-based stats. Identities = 29/118 (24%), Positives = 55/118 (46%), Gaps = 9/118 (7%) Query: 116 ILEIGAGPGLVSIVASILGAQ--VTATDLPDVLGNLQYNLLKNTLQCTAHLPEVKELVWG 173 +LEIGAG GL+S++A+ LGA+ V ++ + N+ N ++ H +V ++ Sbjct: 64 VLEIGAGSGLLSLMAAKLGAKWVVAVEGSEELAKLARENIRANNME---HQVKVLHMMST 120 Query: 174 EDLDKNFPKSAFYYDYVLASDVVYHHYFLDKLLTTMVYLSQPGTVLLWANKFRFSTDY 231 E K+ P+ + ++ LD ++ L +P T ++ +F T Y Sbjct: 121 ELKSKHLPEPPDVLLSEIFGTMMLGESALDYVVDVRNRLLKPTTKII----PQFGTQY 174 >5EKU-A nrPDB Length = 390 Score = 38.9 bits (89), Expect = 0.002, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 7/57 (12%) Query: 116 ILEIGAGPGLVSIVASILGAQ--VTATDLPDVLGNLQYNLLKNTLQCTAHLPEVKEL 170 +LEIGAG GL+S++A+ LGA+ V ++ + N+ N ++ +VK L Sbjct: 99 VLEIGAGSGLLSLMAAKLGAKWVVAVEGSEELAKLARENIRANNMEH-----QVKVL 150 >3MGG-A nrPDB Length = 276 Score = 38.2 bits (87), Expect = 0.004, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 44/110 (40%), Gaps = 12/110 (10%) Query: 113 DAKILEIGAGPGLVSIVASILGAQVTATDL---PDVLGNLQYNLLKNTLQCTAHLPEVKE 169 AK+LE G G G +++ + T + P+ L + N KN + VK Sbjct: 38 GAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKN------GIKNVKF 91 Query: 170 LVWGEDLDKNFPKSAFYYDYVLASDVVYHHYFLDKLLTTMVYLSQPGTVL 219 L + P +D++ V+ H ++ L ++ + +PG + Sbjct: 92 LQANI---FSLPFEDSSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTI 138 >1G6Q-1 nrPDB Length = 328 Score = 37.0 bits (84), Expect = 0.009, Method: Composition-based stats. Identities = 24/111 (21%), Positives = 46/111 (41%), Gaps = 6/111 (5%) Query: 111 FQDAKILEIGAGPGLVSIVASILGA-QVTATDLPDVLGNLQYNLLKNTLQCTAHLPEVKE 169 F+D +L++G G G++S+ A+ GA V D+ ++ + + N L K Sbjct: 37 FKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKL 96 Query: 170 LVWGEDLDKNFPKSAFYYDYVLASDVVYHHYFLDKLLTTMVYLSQPGTVLL 220 ED+ FPK + ++Y +D +L + G ++ Sbjct: 97 ----EDVHLPFPKVDIIISEWMGYFLLY-ESMMDTVLYARDHYLVEGGLIF 142 >3EGE-A nrPDB Length = 261 Score = 35.9 bits (81), Expect = 0.017, Method: Composition-based stats. Identities = 27/147 (18%), Positives = 53/147 (36%), Gaps = 14/147 (9%) Query: 112 QDAKILEIGAGPGLVSIVASILGAQVTATDLPDVLGNLQYNLLKNTLQCTAHLPEVKELV 171 + + I +IGAG G S+ + G V A + V+ ++ Sbjct: 34 KGSVIADIGAGTGGYSVALANQGLFVYAVEPSIVMRQ-----QAVVHP---------QVE 79 Query: 172 WGEDLDKNFPKSAFYYDYVLASDVVYHHYFLDKLLTTMVYLSQPGTVLLWANKFRFSTDY 231 W +N D V++ ++H L+K M + + GT++L R + Sbjct: 80 WFTGYAENLALPDKSVDGVISILAIHHFSHLEKSFQEMQRIIRDGTIVLLTFDIRLAQRI 139 Query: 232 EFLDKFKQVFDTTLLAEYPESSVKLFK 258 D F +++ L + + L + Sbjct: 140 WLYDYFPFLWEDALRFLPLDEQINLLQ 166 >3DMF-A nrPDB Length = 381 Score = 35.5 bits (80), Expect = 0.024, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 8/104 (7%) Query: 73 FAGKEIVIQESIESYGAV-----VWPGAMALCQYLEEHAEELNFQDAKILEIGAGPGLVS 127 F+ + + + + V V P ++ L + L+E + ++L++GAG G ++ Sbjct: 189 FSARILGAEYTFHHLPGVFSAGKVDPASLLLLEALQERLGPEGVRGRQVLDLGAGYGALT 248 Query: 128 IVASILGAQVTAT--DLPDVLGNLQYNLLKNTLQCTAHLPEVKE 169 + + +GA+V DL VL LQ L N L+ A +V E Sbjct: 249 LPLARMGAEVVGVEDDLASVLS-LQKGLEANALKAQALHSDVDE 291 >6CU3-A nrPDB Length = 336 Score = 34.7 bits (78), Expect = 0.039, Method: Composition-based stats. Identities = 22/116 (18%), Positives = 46/116 (39%), Gaps = 13/116 (11%) Query: 111 FQDAKILEIGAGPGLVSIVASILGAQ-VTATDLPDVLGNLQYNLLKNTLQCT-----AHL 164 F+D +L+IG G G++ + A+ GA+ V D+ D++ + + N + Sbjct: 50 FKDKVVLDIGCGTGILCLFAAKAGAKRVIGIDMSDIIDKARQIVSDNGYSHVIELIKGKV 109 Query: 165 PEVKELVWGEDLDKNFPKSAFYYDYVLASDVVYHHYFLDKLLTTMVYLSQPGTVLL 220 ++ +L +G + Y + + L +L+ +PG L Sbjct: 110 EDIAQLPFGIEKVDIIISEWMGYFLL-------YESMLQTVLSARDRWLRPGGYLF 158 >3CJR-A nrPDB Length = 254 Score = 33.6 bits (75), Expect = 0.100, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 111 FQDAKILEIGAGPGLVSIVASILGAQVTATDL-PDVLGNLQYNLLKNTLQC 160 K+L++G G G+++I A LG + D+ P VL + N +N ++ Sbjct: 119 RPGDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRP 169 >3Q7E-A nrPDB Length = 349 Score = 33.6 bits (75), Expect = 0.10, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 45/114 (39%), Gaps = 12/114 (10%) Query: 111 FQDAKILEIGAGPGLVSIVASILGA-QVTATDLPDVLGNLQYNLLKNTLQCTAHLPEVKE 169 F+D +L++G+G G++ + A+ GA +V + + + N L + + K Sbjct: 65 FKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKV 124 Query: 170 LVWGEDLDKNFPKSAFYYDYVL---ASDVVYHHYFLDKLLTTMVYLSQPGTVLL 220 E+++ D ++ +++ L+ +L P ++ Sbjct: 125 ----EEVEL----PVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIF 170 >1F3L-A nrPDB Length = 321 Score = 33.6 bits (75), Expect = 0.10, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 1/52 (1%) Query: 111 FQDAKILEIGAGPGLVSIVASILGA-QVTATDLPDVLGNLQYNLLKNTLQCT 161 F+D +L++G G G++S+ A+ GA +V A D ++L + N L+ T Sbjct: 44 FKDKVVLDVGCGTGILSMFAAKAGAKKVIAVDQSEILYQAMDIIRLNKLEDT 95 >1WS6-A nrPDB Length = 171 Score = 33.2 bits (74), Expect = 0.12, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 32/86 (37%), Gaps = 10/86 (11%) Query: 112 QDAKILEIGAGPGLVSIVASILGAQVTATDL-PDVLGNLQYNLLKN-------TLQCTAH 163 + + L+ AG G V + A+ G + + P+ + L+ N+ + L Sbjct: 41 RRGRFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVF 100 Query: 164 LPEVKELVWGEDLDKNFPKSAFYYDY 189 LPE K GE F + D Sbjct: 101 LPEAKA--QGERFTVAFMAPPYAMDL 124 >3X0D-A nrPDB Length = 655 Score = 32.8 bits (73), Expect = 0.15, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%) Query: 98 LCQYLEEHAEELNFQDAKILEIGAGPGLVSIVASILGAQ-VTATDLPDVLGNLQYNLLKN 156 L + E E +L+IG G GL+S++A+ GA VTA ++ +G+ ++ N Sbjct: 58 LKTTIAEKKHENTDGKVHVLDIGTGTGLLSLMAAREGADKVTALEVFKPMGDCARHITSN 117 Query: 157 TL 158 + Sbjct: 118 SP 119 >6OGN-A nrPDB Length = 692 Score = 32.8 bits (73), Expect = 0.16, Method: Composition-based stats. Identities = 12/27 (44%), Positives = 17/27 (62%) Query: 110 NFQDAKILEIGAGPGLVSIVASILGAQ 136 Q A +L+IG G GL+S++A GA Sbjct: 62 RGQKALVLDIGTGTGLLSMMAVTAGAD 88 >4RYL-A nrPDB Length = 340 Score = 32.4 bits (72), Expect = 0.22, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 1/59 (1%) Query: 111 FQDAKILEIGAGPGLVSIVASILGA-QVTATDLPDVLGNLQYNLLKNTLQCTAHLPEVK 168 F+D +L++G G G++S+ A+ GA +V D ++L + N L+ T L + K Sbjct: 63 FKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGK 121 >5DST-A nrPDB Length = 332 Score = 31.6 bits (70), Expect = 0.40, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 47/120 (39%), Gaps = 24/120 (20%) Query: 111 FQDAKILEIGAGPGLVSIVASILGAQVT-------ATDLPDVLGNLQYNLLKNTLQCTAH 163 F+D +L++G+G G++S+ A+ GA+ +D + ++ N L N + Sbjct: 48 FKDKVVLDVGSGTGILSMFAAKAGAKKVFGIECSSISDYSE--KIIKANHLDNIITIFKG 105 Query: 164 LPEVKELVWGEDLDKNFPKSAFYYDYVL---ASDVVYHHYFLDKLLTTMVYLSQPGTVLL 220 E EL D ++ +++ L+ ++ +PG ++ Sbjct: 106 KVEEVEL------------PVEKVDIIISEWMGYCLFYESMLNTVIFARDKWLKPGGLMF 153 >5BP9-A nrPDB Length = 281 Score = 31.6 bits (70), Expect = 0.40, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 47/126 (37%), Gaps = 22/126 (17%) Query: 108 ELNFQDAKILEIGAGPGLVSIVASILGAQVTATDL-PDVLGNLQYNLLKNTLQCTAHLPE 166 L IL++GAG G ++ G +V+A D+ P + ++ Sbjct: 97 ALAMATGTILDVGAGSGCHALALQESGKEVSAIDISPLSVEVMK---------------- 140 Query: 167 VKELVWGEDLDKNFPKSAFYYDYVL----ASDVVYHHYFLDKLLTTMVYLSQPGTVLLW- 221 ++ + ++ + A +D +L S ++ + M L +P +L Sbjct: 141 LRGVKDARQVNLFDERFAATFDTILMLMNGSGIIGRLENMPLFFRKMKQLLRPDGCILMD 200 Query: 222 ANKFRF 227 ++ R+ Sbjct: 201 SSDLRY 206 >5TR7-A nrPDB Length = 341 Score = 31.2 bits (69), Expect = 0.45, Method: Composition-based stats. Identities = 24/127 (18%), Positives = 48/127 (37%), Gaps = 12/127 (9%) Query: 53 HSLQKFVPTDYASYTQEHYRFAGKEIVIQESIESYGAVVWPGAMALCQYLEEHAEELNFQ 112 +L + VP +YA Y+++ + + G I + + ++W +M + H + Sbjct: 158 QALIRDVPEEYAIYSEQKFTYNG----ITQYNRN--GLLWDKSMNVDGIKTGHT---SGA 208 Query: 113 DAKILEIGAGPGLVSIVASILGAQVTATDLPDVLGNLQYNLL--KNTLQCTAHLPEVKEL 170 ++ A G + +VA ++G + L Y + A V E Sbjct: 209 GYNLVS-SATEGNMRLVAVVMGTDNENARKAESKKLLSYGFRFFETVAPHKAGETFVNET 267 Query: 171 VWGEDLD 177 +W D D Sbjct: 268 IWMGDKD 274 >3TK8-A nrPDB Length = 316 Score = 31.2 bits (69), Expect = 0.45, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 36/99 (36%), Gaps = 20/99 (20%) Query: 59 VPTDYASYTQEHY----------------RFAGKEIVIQESIESYGAVVWPGAMALCQYL 102 VP+ +A+YT E + F K +V+ S + GA V G M + Sbjct: 129 VPSKFANYTAEDFAAGGFRVVPPAIARRGSFIAKNVVLMPSYTNIGAYVDEGTMV-DTWA 187 Query: 103 EEHAEELNFQDAKILEIGAGPGLVSIVASILGAQVTATD 141 + Q K + + G G+ ++ + V D Sbjct: 188 TVGSCA---QIGKNVHLSGGVGIGGVLEPLQANPVIIED 223 >5WMM-A nrPDB Length = 926 Score = 30.9 bits (68), Expect = 0.61, Method: Composition-based stats. Identities = 32/137 (23%), Positives = 56/137 (40%), Gaps = 19/137 (13%) Query: 107 EELNF-QDAKILEIGAGPG-LVSIVA----SILGAQVTATDLPDVLGNLQYNLLKNTLQC 160 EE+ + +ILEIG G G L+ +A + G + LP + + + T C Sbjct: 549 EEVRGLRARRILEIGVGSGLLLGPLAPEAEAYWGTDFS---LPVIE---RLEVQVGTDPC 602 Query: 161 TAHLPEVKELVWGEDLDKNFPKSAFYYDYVLASDVVYHHY---FLDKLLTTMVYLSQPGT 217 ++ D+ P Y+D V+ + VV + +L ++L + PG Sbjct: 603 LKEKVSLRCQH--ADVADGLP--VKYFDTVILNSVVQYFPDAAYLSRVLDVALDRLAPGG 658 Query: 218 VLLWANKFRFSTDYEFL 234 +L + + T EFL Sbjct: 659 RILVGDVRNYGTLREFL 675 >1U0N-C nrPDB Length = 125 Score = 30.9 bits (68), Expect = 0.68, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 31/86 (36%), Gaps = 17/86 (19%) Query: 60 PTDYASYTQEHYRFAGKEIVIQESIESYGAVVWPGAMALCQYLEEHAEELNFQDAKILEI 119 P D++SY YRF + W A C + A ++FQ + + Sbjct: 3 PPDWSSYEGHCYRFF-------KEWMH-----WDDAEEFCTEQQTGAHLVSFQSKEEADF 50 Query: 120 GAGPGLVSIVASILGAQVTATDLPDV 145 + S+ + +L V L DV Sbjct: 51 -----VRSLTSEMLKGDVVWIGLSDV 71 >4P7C-A nrPDB Length = 322 Score = 30.5 bits (67), Expect = 0.84, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 39/108 (36%), Gaps = 11/108 (10%) Query: 106 AEELNFQDAKILEIGAGPGLVSIVASILGAQVTATDLPDVLGNLQYNLLKNTLQ--CTAH 163 + L+ + ++L++G G G GA P+ L Q+ ++ L H Sbjct: 115 SPHLDLKGKRVLDVGCGNGYYQWRMLGAGADSVIGVDPNWLFFCQFQAMQRYLPDLPAWH 174 Query: 164 LPEVKELVWGEDLDKNFPKSAFYYDYVLASDVVYHHYFLDKLLTTMVY 211 LP E + P + +D V + V+YH L + Sbjct: 175 LPFALE---------DLPANLEGFDTVFSMGVLYHRKSPIDHLLALKD 213 >5LV5-A nrPDB Length = 403 Score = 30.1 bits (66), Expect = 0.91, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 16/24 (66%) Query: 112 QDAKILEIGAGPGLVSIVASILGA 135 + +L++GAG G++SI + GA Sbjct: 110 RGKTVLDVGAGTGILSIFCAQAGA 133 >5EGS-A nrPDB Length = 376 Score = 30.1 bits (66), Expect = 0.91, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 16/24 (66%) Query: 112 QDAKILEIGAGPGLVSIVASILGA 135 + +L++GAG G++SI + GA Sbjct: 83 RGKTVLDVGAGTGILSIFCAQAGA 106 >5NNP-A nrPDB Length = 745 Score = 30.1 bits (66), Expect = 0.94, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 19/48 (39%), Gaps = 6/48 (12%) Query: 47 KIEPSLHSLQKFVPT------DYASYTQEHYRFAGKEIVIQESIESYG 88 K+EP H +Q+ + DYA Y Q I+++ + Sbjct: 106 KLEPESHQIQRDLAVLQIQMRDYAGYVQSRLNMLKARPQIRQNWTALA 153 >4KRI-A nrPDB Length = 433 Score = 30.1 bits (66), Expect = 0.99, Method: Composition-based stats. Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 12/143 (8%) Query: 113 DAKILEIGAGPGLVSIVASI-LGAQVTATDLPDVLGNLQYNLLKNTLQCTAHLPEVKELV 171 ++L+IG G G + A+ G QV D L N+L L+ + + Sbjct: 223 GQRMLDIGVGIGGGARQAASEFGLQVHGVD-------LSTNMLAVALERVHKEKDARV-T 274 Query: 172 WGEDLDKNFPKSAFYYDYVLASDVVYHHYFLDKLLTTMVYLSQPGT-VLLWANKFRFST- 229 + + +DYV + D + H DKL + + +PG VL+ T Sbjct: 275 YAVCDACEYEFEPNSFDYVFSRDCIQHIKDTDKLFSRIYRALKPGGKVLITMYGVGHGTL 334 Query: 230 -DYEFLDKFKQVFDTTLLAEYPE 251 + ++ + L + E Sbjct: 335 SESFKEYVSQRQYYLKNLEQIEE 357 >4LWO-B nrPDB Length = 368 Score = 29.3 bits (64), Expect = 1.7, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 23/41 (56%) Query: 95 AMALCQYLEEHAEELNFQDAKILEIGAGPGLVSIVASILGA 135 A + Y + + + + ++++G+G G++S+ A+ GA Sbjct: 37 AQRMSFYRKSIEQSASIEGKVVVDVGSGTGILSMWAARAGA 77 >1DUS-A nrPDB Length = 194 Score = 28.9 bits (63), Expect = 2.4, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 5/50 (10%) Query: 112 QDAKILEIGAGPGLVSI-----VASILGAQVTATDLPDVLGNLQYNLLKN 156 +D IL++G G G++ I V S A + + N++ N L N Sbjct: 52 KDDDILDLGCGYGVIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDN 101 >2IP2-A nrPDB Length = 334 Score = 28.5 bits (62), Expect = 2.8, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 32/88 (36%), Gaps = 9/88 (10%) Query: 75 GKEIVIQESIESYGAVVWPG------AMALCQY-LEEHAEELNFQDAKILEIGAGPGLV- 126 G E+ E SY AM E L+F+ +++G G G + Sbjct: 123 GFELAFGEDFYSYLKRCPDAGRRFLLAMKASNLAFHEIPRLLDFRGRSFVDVGGGSGELT 182 Query: 127 -SIVASILGAQVTATDLPDVLGNLQYNL 153 +I+ + A+ D LG + NL Sbjct: 183 KAILQAEPSARGVMLDREGSLGVARDNL 210 >2B3T-A nrPDB Length = 276 Score = 28.5 bits (62), Expect = 2.9, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 24/56 (42%), Gaps = 3/56 (5%) Query: 102 LEEHAEELNFQDAKILEIGAGPGLVSIVASILGAQ---VTATDLPDVLGNLQYNLL 154 +E+ L Q +IL++G G G +++ + + +PD + Q N Sbjct: 99 VEQALARLPEQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQ 154 >5K98-A nrPDB Length = 448 Score = 28.5 bits (62), Expect = 3.3, Method: Composition-based stats. Identities = 25/155 (16%), Positives = 49/155 (31%), Gaps = 20/155 (12%) Query: 103 EEHAEELNFQDAKILEIGAGPGLVSIVASILGAQVTATDLPDVLGNLQYNLLKNTLQCTA 162 E+ + + E GPG+ I+A ++G+ D D + A Sbjct: 261 EDMCQTFGLPSSVKYESDGGPGIARIMAFLMGSSEALKDRYDFMKF-----QVFQWLIGA 315 Query: 163 HLPEVKELVWGEDLDKNFPKSAFYYDYVLASDVVYHHYFLDKLLTTMVYLSQPGTVL-LW 221 K ++ + FY D++ L T +++S + L Sbjct: 316 TQGHAKNFSVFIQAGGSYRLTPFY-------DII---SAFPVLGGTGIHISDLKLAMGLN 365 Query: 222 ANKFRFSTDYEFLDKFKQVF-DTTLLAEYPESSVK 255 A+K + + F T + +PE + Sbjct: 366 ASK---GKKTAIDKIYPRHFLATAKVLRFPEVQMH 397 >2GS9-A nrPDB Length = 211 Score = 28.5 bits (62), Expect = 3.3, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 33/108 (30%), Gaps = 15/108 (13%) Query: 113 DAKILEIGAGPGLVSIVASILGAQVTATDLPDVLGNLQYNLLKNTLQCTAHLPEVKELVW 172 +LE+GAG G LP + + + E W Sbjct: 37 GESLLEVGAGTG------------YWLRRLPYPQ---KVGVEPSEAMLAVGRRRAPEATW 81 Query: 173 GEDLDKNFPKSAFYYDYVLASDVVYHHYFLDKLLTTMVYLSQPGTVLL 220 + P +D VL + ++++L + +PG L+ Sbjct: 82 VRAWGEALPFPGESFDVVLLFTTLEFVEDVERVLLEARRVLRPGGALV 129 >4QJV-B nrPDB Length = 94 Score = 28.2 bits (61), Expect = 3.6, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 2/55 (3%) Query: 66 YTQEHYRFAGKEIV--IQESIESYGAVVWPGAMALCQYLEEHAEELNFQDAKILE 118 + EH FAG I I + + VV G + + LEE A+++ + ++LE Sbjct: 33 HENEHVTFAGYTIEHPITMARKPRFKVVTDGKITPEKALEEAAQKIFDRAREVLE 87 >1JJO-C nrPDB Length = 261 Score = 28.2 bits (61), Expect = 3.6, Method: Composition-based stats. Identities = 10/37 (27%), Positives = 15/37 (40%) Query: 227 FSTDYEFLDKFKQVFDTTLLAEYPESSVKLFKGILKW 263 F + EFL K F+ + +V + I KW Sbjct: 18 FHVNEEFLQMLKMYFNAEVNHVDFSQNVAVANSINKW 54 >2YBQ-A nrPDB Length = 292 Score = 28.2 bits (61), Expect = 3.8, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 20/47 (42%), Gaps = 5/47 (10%) Query: 108 ELNFQDAKILEIGAGPGLVSIV-----ASILGAQVTATDLPDVLGNL 149 +++F + +GAGPG ++ A + A+V D + Sbjct: 17 DVDFPAGSVALVGAGPGDPGLLTLRAWALLQQAEVVVYDRLVARELI 63 >1WY7-A nrPDB Length = 207 Score = 28.2 bits (61), Expect = 4.2, Method: Composition-based stats. Identities = 9/30 (30%), Positives = 18/30 (60%) Query: 110 NFQDAKILEIGAGPGLVSIVASILGAQVTA 139 + + + ++GAG G++S A +LGA+ Sbjct: 47 DIEGKVVADLGAGTGVLSYGALLLGAKEVI 76 >5NTF-A nrPDB Length = 520 Score = 27.8 bits (60), Expect = 5.1, Method: Composition-based stats. Identities = 10/58 (17%), Positives = 22/58 (37%) Query: 93 PGAMALCQYLEEHAEELNFQDAKILEIGAGPGLVSIVASILGAQVTATDLPDVLGNLQ 150 G + L + E++F+ ++++ G I A + D + L L+ Sbjct: 371 EGRLVLGDGVFHATHEISFKPDVLVDMATLTGAQGIATGHRHAGIFVNDEEEELSFLK 428 >5FQM-A nrPDB Length = 269 Score = 27.8 bits (60), Expect = 5.2, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 3/35 (8%) Query: 89 AVVWP---GAMALCQYLEEHAEELNFQDAKILEIG 120 AV+WP + + YL E + + +DA I E+G Sbjct: 222 AVIWPPGRAPIVVTVYLTESQVDADARDAVIAEVG 256 >5MRE-55 nrPDB Length = 339 Score = 27.4 bits (59), Expect = 5.9, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 2/68 (2%) Query: 103 EEHAEELNFQDAKILEIGAGPGLVSIVASILGAQVTATDLPDVLGNLQYNLLKNTLQCTA 162 E +L K+L GL +I+ + LG Q+ T P++ G ++ + ++ Sbjct: 205 EIAQRKLQVAWKKVLNRKNNTGLANILVATLGRQIGFT--PELTGLQPVDISLPDIPNSS 262 Query: 163 HLPEVKEL 170 E+K+L Sbjct: 263 SGAELKDL 270 >1ZS9-A nrPDB Length = 261 Score = 27.0 bits (58), Expect = 9.8, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 64/176 (36%), Gaps = 20/176 (11%) Query: 80 IQESIESYGAVVWPGAMALCQYLEEHAEELNFQDAKILEIGAGPGLVSIVASILGAQVTA 139 I+E+++ Y W EE ++++ + E G V I A+ Sbjct: 35 IEENVKEYLQTHWEE--------EECQQDVSLLRKQAEEDAHLDGAVPIPAASGNG---V 83 Query: 140 TDLPDVLGNLQYNL--LKNTLQCTAHLPEVKELVWGEDLDKNFPKSAFYYDYVLASDVVY 197 DL ++ + N+ + + T L +++ +W K+ F+ D V A V Sbjct: 84 DDLQQMIQAVVDNVCWQMSLDRKTTALKQLQGHMWRAAFTAGRMKAEFFADVVPA--VRK 141 Query: 198 HHYFLDKLLTTMVYLSQPGTVLLWANKFRFSTDYEFLDKFKQVFDTTLLAEYPESS 253 VY+ G+V F ST+ + L+ FDT + + S Sbjct: 142 WREA-----GMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIGHKVESES 192 >2DEI-A nrPDB Length = 350 Score = 26.6 bits (57), Expect = 10.0, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 3/64 (4%) Query: 83 SIESYGAVVWPGAMALCQYLEEHAEELNFQDAKILEIGA-GPGLVSIVASILGAQVTATD 141 ++E G ++ L + E +EL+F + L++GA G L A G+ + D Sbjct: 257 NVEEVGKILTTAHWDLAKNYEVSCKELDFFVERALKLGAYGARLTG--AGFGGSAIALVD 314 Query: 142 LPDV 145 D Sbjct: 315 KEDA 318 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.309 0.129 0.345 Lambda K H 0.267 0.0401 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 10,244,109 Number of Sequences: 36641 Number of extensions: 398781 Number of successful extensions: 1262 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 40 Number of HSP's successfully gapped in prelim test: 40 Number of HSP's that attempted gapping in prelim test: 1201 Number of HSP's gapped (non-prelim): 80 length of query: 264 length of database: 10,336,785 effective HSP length: 95 effective length of query: 169 effective length of database: 6,855,890 effective search space: 1158645410 effective search space used: 1158645410 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 58 (27.0 bits)