BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= Q5RKV6
(272 letters)
Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
36,641 sequences; 10,336,785 total letters
Searching..................................................done
Results from round 1
Score E
Sequences producing significant alignments: (bits) Value
6D6Q-F nrPDB 512 e-146
2WNR-B nrPDB 115 1e-26
2PO0-A nrPDB 109 1e-24
2JEA-B nrPDB 108 3e-24
6D6Q-B nrPDB 100 5e-22
2BA0-F nrPDB 86 1e-17
4OO1-B nrPDB 74 7e-14
6D6Q-D nrPDB 61 6e-10
3HKM-A nrPDB 56 1e-08
6FSZ-DD nrPDB 50 9e-07
3U1K-A nrPDB 47 8e-06
5K36-F nrPDB 46 2e-05
1UDQ-A nrPDB 44 6e-05
1OYR-A nrPDB 40 0.001
4NBQ-A nrPDB 40 0.001
3B4T-A nrPDB 37 0.007
3DD6-A nrPDB 37 0.011
1R6M-A nrPDB 37 0.011
5XEX-A nrPDB 37 0.013
5YJJ-A nrPDB 35 0.033
2PO2-B nrPDB 30 1.4
6D6R-C nrPDB 29 2.8
4ILS-A nrPDB 28 3.8
3CDI-A nrPDB 28 4.2
3H1C-A nrPDB 28 4.6
4AIM-A nrPDB 27 7.0
6D6K-A nrPDB 27 8.2
6IAA-A nrPDB 27 9.6
>6D6Q-F nrPDB
Length = 272
Score = 512 bits (1318), Expect = e-146, Method: Compositional matrix adjust.
Identities = 272/272 (100%), Positives = 272/272 (100%)
Query: 1 MPGDHRRIRGPEESQPPQLYAADEEEAPGTRDPTRLRPVYARAGLLSQAKGSAYLEAGGT 60
MPGDHRRIRGPEESQPPQLYAADEEEAPGTRDPTRLRPVYARAGLLSQAKGSAYLEAGGT
Sbjct: 1 MPGDHRRIRGPEESQPPQLYAADEEEAPGTRDPTRLRPVYARAGLLSQAKGSAYLEAGGT 60
Query: 61 KVLCAVSGPRQAEGGERGGGPAGAGGEAPAALRGRLLCDFRRAPFAGRRRRAPPGGCEER 120
KVLCAVSGPRQAEGGERGGGPAGAGGEAPAALRGRLLCDFRRAPFAGRRRRAPPGGCEER
Sbjct: 61 KVLCAVSGPRQAEGGERGGGPAGAGGEAPAALRGRLLCDFRRAPFAGRRRRAPPGGCEER 120
Query: 121 ELALALQEALEPAVRLGRYPRAQLEVSALLLEDGGSALAAALTAAALALADAGVEMYDLV 180
ELALALQEALEPAVRLGRYPRAQLEVSALLLEDGGSALAAALTAAALALADAGVEMYDLV
Sbjct: 121 ELALALQEALEPAVRLGRYPRAQLEVSALLLEDGGSALAAALTAAALALADAGVEMYDLV 180
Query: 181 VGCGLSLAPGPAPTWLLDPTRLEEERAAAGLTVALMPVLNQVAGLLGSGEGGLTESWAEA 240
VGCGLSLAPGPAPTWLLDPTRLEEERAAAGLTVALMPVLNQVAGLLGSGEGGLTESWAEA
Sbjct: 181 VGCGLSLAPGPAPTWLLDPTRLEEERAAAGLTVALMPVLNQVAGLLGSGEGGLTESWAEA 240
Query: 241 VRLGLEGCQRLYPVLQQSLVRAARRRGAAAQP 272
VRLGLEGCQRLYPVLQQSLVRAARRRGAAAQP
Sbjct: 241 VRLGLEGCQRLYPVLQQSLVRAARRRGAAAQP 272
>2WNR-B nrPDB
Length = 240
Score = 115 bits (289), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 129/238 (54%), Gaps = 21/238 (8%)
Query: 27 APGTRDPTR----LRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGPA 82
+P R+ R LRP+ AG+L +A GS+YLE GG K+L AV GPR+A+ +
Sbjct: 13 SPSVREDGRAFDELRPLKIEAGILERADGSSYLEFGGNKILVAVYGPREAQIRKL----- 67
Query: 83 GAGGEAPAALRGRLLCDFRRAPFAGRRRRAPPGGCEERELALALQEALEPAVRLGRYPRA 142
+ P R + C + APF+ R+ P E++ EAL PA+ L ++PR+
Sbjct: 68 ----QRPD--RAVIRCRYNMAPFSVEERKRPGPDRRSVEISKITAEALRPALILEKFPRS 121
Query: 143 QLEVSALLLEDGGSALAAALTAAALALADAGVEMYDLVVGCGLSLAPGPAPTWLLDPTRL 202
++V +LE G A +TAA++ALADAG+ M D+VV C A +LD +
Sbjct: 122 VIDVFIEVLEAEGGTRCAGITAASVALADAGIPMRDMVVACA---AGKVGDQVVLDLSEE 178
Query: 203 EEERAAAGLTVALMPVLNQVAGLLGSGEGGLT-ESWAEAVRLGLEGCQRLYPVLQQSL 259
E++ A + VA++P ++ L +G LT E + A+ L +EGC R++ V +++L
Sbjct: 179 EDKEGQADVPVAILPRTREIT--LLQSDGNLTPEEFERALDLAVEGCLRIHEVQKEAL 234
>2PO0-A nrPDB
Length = 249
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 117/230 (50%), Gaps = 17/230 (7%)
Query: 31 RDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGPAGAGGEAPA 90
R LRP+ G+L A GSAY+E G K++ AV GPR+ P A
Sbjct: 21 RKKYELRPIKMEVGVLKNANGSAYIEWGKNKIIAAVYGPRELH-------PKHLQRPDRA 73
Query: 91 ALRGRLLCDFRRAPFAGRRRRAPPGGCEERELALALQEALEPAVRLGRYPRAQLEVSALL 150
LR R + APF+ R+ P E++ ++ ALEPA+ L +PR ++V +
Sbjct: 74 ILRVR----YNMAPFSVEERKKPGPDRRSIEISKVIKGALEPALILEMFPRTAIDVFIEV 129
Query: 151 LEDGGSALAAALTAAALALADAGVEMYDLVVGCGLSLAPGPAPTWLLDPTRLEEERAAAG 210
L+ A +TAA+LALADAG+ M DLV C G +LD + E+ A
Sbjct: 130 LQADAGTRVAGITAASLALADAGIPMRDLVAACAAGKIEG---EIVLDLNKEEDNYGEAD 186
Query: 211 LTVALMPVLNQVAGLLGSGEGGLT-ESWAEAVRLGLEGCQRLYPVLQQSL 259
+ VA+MP+ N + L +G LT + + EAV+L ++G + +Y +++L
Sbjct: 187 VPVAIMPLKNDIT--LLQMDGYLTKDEFIEAVKLAIKGAKAVYQKQREAL 234
>2JEA-B nrPDB
Length = 250
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/245 (33%), Positives = 122/245 (49%), Gaps = 20/245 (8%)
Query: 17 PQLYAADEEEAPGTRDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGE 76
P+L D + G R P LR + G+L A GSA E G TK + AV GP++
Sbjct: 12 PKLILDDGKRTDG-RKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGPKEMH--- 67
Query: 77 RGGGPAGAGGEAPAALRGRLLCDFRRAPFAGRRRRAPPGGCEERELALALQEALEPAVRL 136
P A LR R + PF+ R+ P E EL+ ++EALE AV +
Sbjct: 68 ----PRHLSLPDRAVLRVR----YHMTPFSTDERKNPAPSRREIELSKVIREALESAVLV 119
Query: 137 GRYPRAQLEVSALLLE-DGGSALAAALTAAALALADAGVEMYDLVVGCGLSLAPGPAPTW 195
+PR ++V +L+ D GS L + L AA+LALADAG+ M DL+ G + A G
Sbjct: 120 ELFPRTAIDVFTEILQADAGSRLVS-LMAASLALADAGIPMRDLIAGVAVGKADG---VI 175
Query: 196 LLDPTRLEEERAAAGLTVALMPVLNQVAGLLGSGEGGLT-ESWAEAVRLGLEGCQRLYPV 254
+LD E A + +A+MP LNQV L G +T + + +A L ++G +Y +
Sbjct: 176 ILDLNETEAMWGEADMPIAMMPSLNQVT--LFQLNGSMTPDEFRQAFDLAVKGINIIYNL 233
Query: 255 LQQSL 259
+++L
Sbjct: 234 EREAL 238
>6D6Q-B nrPDB
Length = 249
Score = 100 bits (250), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 95/191 (49%), Gaps = 14/191 (7%)
Query: 36 LRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGPAGAGGEAPAALRGR 95
LR + AR G+ +QA GSAY+E G TK L V GP + G P R
Sbjct: 26 LRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRGSRARALPD----------RAL 75
Query: 96 LLCDFRRAPFA-GRRRRAPPGGCEERELALALQEALEPAVRLGRYPRAQLEVSALLLEDG 154
+ C + A F+ G R+R P G + E+ L L++ E A+ +PR+Q+++ +L+
Sbjct: 76 VNCQYSSATFSTGERKRRPHGDRKSCEMGLQLRQTFEAAILTQLHPRSQIDIYVQVLQAD 135
Query: 155 GSALAAALTAAALALADAGVEMYDLVVGCGLSLAPGPAPTWLLDPTRLEEERAAAGLTVA 214
G AA + AA LA+ DAG+ M D V C G T L D + +EE L +A
Sbjct: 136 GGTYAACVNAATLAVLDAGIPMRDFVCACSAGFVDG---TALADLSHVEEAAGGPQLALA 192
Query: 215 LMPVLNQVAGL 225
L+P Q+A L
Sbjct: 193 LLPASGQIALL 203
>2BA0-F nrPDB
Length = 258
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 112/233 (48%), Gaps = 16/233 (6%)
Query: 31 RDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGPAGAGGEAPA 90
R LRP+ A +L +A GS YLE G KV+ AV GPR+ P + A
Sbjct: 21 RKFDELRPIKIEASVLKRADGSCYLEMGKNKVIAAVFGPREVH-------PRHLQDPSKA 73
Query: 91 ALRGRLLCDFRRAPFAGRRRRAPPGGCEERELALALQEALEPAVRLGRYPRAQLEVSALL 150
+R R + APF+ R+ P E++ +EA E + +PR+ +++ +
Sbjct: 74 IIRYR----YNMAPFSVEERKRPGPDRRSIEISKVSKEAFEAVIMKELFPRSAIDIFVEV 129
Query: 151 LEDGGSALAAALTAAALALADAGVEMYDLVVGCGLSLAPGPAPTWLLDPTRLEEERAAAG 210
L+ + A L AA++AL DAGV M ++ + A G +LDP + E+ A
Sbjct: 130 LQADAGSRTACLNAASVALVDAGVPMKGMITSVAVGKADG---QLVLDPMKEEDNFGEAD 186
Query: 211 LTVALMPVLNQVAGL-LGSGEGGLT-ESWAEAVRLGLEGCQRLYPVLQQSLVR 261
+ A + ++ + L +G +T + +A+ L +G ++Y + +++++R
Sbjct: 187 MPFAFLIRNGKIESIALLQMDGRMTRDEVKQAIELAKKGALQIYEMQREAILR 239
>4OO1-B nrPDB
Length = 250
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 100/224 (44%), Gaps = 18/224 (8%)
Query: 49 AKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGPAGAGGEAPAALRGRLLCDFRRAPFAGR 108
A GS+Y+E G K++ V GP++ + + AL L F+
Sbjct: 40 ADGSSYMEQGNNKIITLVKGPKEPR--------LKSQMDTSKAL---LNVSVNITKFSKF 88
Query: 109 RRRAPPGGCEER--ELALALQEALEPAVRLGRYPRAQLEVSALLLEDGGSALAAALTAAA 166
R E R E+ +L E V L YPR +++ +LE G + + +
Sbjct: 89 ERSKSSHKNERRVLEIQTSLVRMFEKNVMLNIYPRTVIDIEIHVLEQDGGIMGSLINGIT 148
Query: 167 LALADAGVEMYDLVVGCGLSLAPGPAPTWLLDPTRLEEERAAAGLTVALMPVLNQVAGLL 226
LAL DAG+ M+D + G + L T LLD LEE A + +T+ ++ +++ LL
Sbjct: 149 LALIDAGISMFDYISGISVGLYD---TTPLLDTNSLEEN-AMSTVTLGVVGKSEKLSLLL 204
Query: 227 GSGEGGLTESWAEAVRLGLEGCQRLYPVLQQSLVRAARRRGAAA 270
+ L + + +G+ G R+ ++ + L + A++R + A
Sbjct: 205 VEDKIPL-DRLENVLAIGIAGAHRVRDLMDEELRKHAQKRVSNA 247
>6D6Q-D nrPDB
Length = 237
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 88/201 (43%), Gaps = 24/201 (11%)
Query: 36 LRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGPAGAGGEAPAALRGR 95
LR LLS+ GSA G T VL V GP + + + A LR +
Sbjct: 30 LRHFACEQNLLSRPDGSASFLQGDTSVLAGVYGPAEVKVSKEIFNKA----TLEVILRPK 85
Query: 96 LLCDFRRAPFAGRRRRAPPGGCEERELALALQEALEPAVRLGRYPRAQLEVSALLLEDGG 155
+ PG E+ L ++ E V +PR + V ++ D G
Sbjct: 86 I---------------GLPGVAEKSRERL-IRNTCEAVVLGTLHPRTSITVVLQVVSDAG 129
Query: 156 SALAAALTAAALALADAGVEMYDLVVGCGLSLAPGPAPTWLLDPTRLEEERAAAGLTVAL 215
S LA L AA +AL DAGV M L CG++ A T +LDPT +E+ A A LT AL
Sbjct: 130 SLLACCLNAACMALVDAGVPMRALF--CGVACALDSDGTLVLDPTSKQEKEARAVLTFAL 187
Query: 216 MPVLNQVAGLLGSGEGGLTES 236
V ++ L+ S +G +++
Sbjct: 188 DSVERKL--LMSSTKGLYSDT 206
>3HKM-A nrPDB
Length = 246
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 78/185 (42%), Gaps = 26/185 (14%)
Query: 24 EEEAPGTRDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGPAG 83
EE R+P +LRP L +A GSA G T VL AV GP+ G +G P
Sbjct: 2 EESRADGRNPNQLRPFSCTRNPLDRAHGSARWAQGDTIVLAAVYGPK--PGTRKGENPEK 59
Query: 84 AGGEAPAALRGRLLCDFRRAPFAGRRRRAPPGGCEERELALALQEALEPAVRLGRYPRAQ 143
A E P G+ G +E+E + L+ L+ L +P
Sbjct: 60 ASIEVVW------------KPMTGQI------GKQEKEYEMTLKRTLQSICLLTVHPNTT 101
Query: 144 LEVSALLLEDGGSALAAALTAAALALADAGVEMYDLVV--GCGLSLAPGPAPTWLLDPTR 201
V ++ + GS L A+ A AL AG+ + L V GCG+ L G +LD +
Sbjct: 102 TSVILQVVGNDGSLLPCAINACCAALVFAGIPLKHLAVAIGCGV-LEDGEV---ILDTNK 157
Query: 202 LEEER 206
EE++
Sbjct: 158 AEEQQ 162
>6FSZ-DD nrPDB
Length = 245
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 96/226 (42%), Gaps = 34/226 (15%)
Query: 39 VYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGPAGAGGEAPAALRGRLLC 98
V A G+L GS+ + TKV+C+V+GP + + A E P L ++
Sbjct: 25 VQAEIGILDHVDGSSEFVSQDTKVICSVTGPIEPK----------ARQELPTQLALEII- 73
Query: 99 DFRRAPFAGRRRRAPPGGCEERELALALQEALEPAVRLGRYPRAQLEVSALLLEDGGS-- 156
R A R E+ L L+ L P + YPR +++ +LE G
Sbjct: 74 -VRPAKGVATTR--------EKVLEDKLRAVLTPLITRHCYPRQLCQITCQILESGEDEA 124
Query: 157 -----ALAAALTAAALALADAGVEMYDLVVGCGLSLAPGPAPTWLLDPTRLEEERAAAGL 211
L+ + AA LAL DAG+ + + +++ + ++DPT + + + +
Sbjct: 125 EFSLRELSCCINAAFLALVDAGIALNSMCASIPIAIIKDTSD-IIVDPTAEQLKISLSVH 183
Query: 212 TVALM-----PVLNQVAGLLGSGEGGLTESWAEAVRLGLEGCQRLY 252
T+AL V+ V L +G+ + ++ + LG + CQ L
Sbjct: 184 TLALEFVNGGKVVKNVLLLDSNGDFNEDQLFS-LLELGEQKCQELV 228
>3U1K-A nrPDB
Length = 630
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 68/169 (40%), Gaps = 17/169 (10%)
Query: 31 RDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGPAGAGGEAPA 90
RD T LR V + GSA + G T+VLC V+ G + G
Sbjct: 323 RDLTSLRNVSCEVDMFKTLHGSALFQRGQTQVLCTVTFDSLESGIKSDQVITAINGIKDK 382
Query: 91 ALRGRLLCDFRRAPFAGRRRRAPPGGCEEREL---ALALQEALEPAVRLGRYPR---AQL 144
+ + P+A G REL ALA ++AL P + PR +
Sbjct: 383 ----NFMLHYEFPPYA-TNEIGKVTGLNRRELGHGALA-EKALYPVI-----PRDFPFTI 431
Query: 145 EVSALLLEDGGSALAAALTAAALALADAGVEMYDLVVGCGLSLAPGPAP 193
V++ +LE GS+ A+ +LAL D+GV + V G + L P
Sbjct: 432 RVTSEVLESNGSSSMASACGGSLALMDSGVPISSAVAGVAIGLVTKTDP 480
>5K36-F nrPDB
Length = 250
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 76/208 (36%), Gaps = 54/208 (25%)
Query: 4 DHRRIRGPEESQPPQLYAADEEEAPGTRDPTRLRP--------VYARAGLLSQAKGSAYL 55
D RR+ GP ++P ++ P + T L P + G + GSA +
Sbjct: 5 DRRRLLGPAAAKP-MAFSNTTTHVP-EKKSTDLTPKGNESEQELSLHTGFIENCNGSALV 62
Query: 56 EA----GGTKVLCAVSGPRQAEGGERGGGPAGAGGEAPAALRGRLLCDFRRAPFAGRRRR 111
EA T ++ AV GPR G + G L+ LL +
Sbjct: 63 EARSLGHQTSLITAVYGPRSIRGS------FTSQGTISIQLKNGLLEKYNTN-------- 108
Query: 112 APPGGCEERELALALQEALEPAVRLGRYPRAQLEVSALLLEDG----------------- 154
E +E++ L V L RYP++ +++ L D
Sbjct: 109 ------ELKEVSSFLMGIFNSVVNLSRYPKSGIDIFVYLTYDKDLTNNPQDDDSQSKMMS 162
Query: 155 ---GSALAAALTAAALALADAGVEMYDL 179
S + +T+ LALADAG+E+ D+
Sbjct: 163 SQISSLIPHCITSITLALADAGIELVDM 190
>1UDQ-A nrPDB
Length = 255
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 63/150 (42%), Gaps = 13/150 (8%)
Query: 31 RDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGPAGAGGEA-- 88
R +LRPV + L +GS + G TKV+C S +G G E
Sbjct: 6 RKEDQLRPVSIQRDFLEYPEGSCLISFGKTKVICTASVIENVPNWLKGKGQGWITAEYSM 65
Query: 89 -PAALRGRLLCDFRRAPFAGRRRRAPPGGCEERELALALQEALEPAVRLGRYPRAQLEVS 147
P A + R + R GR G E+ + A+ AV L + + V
Sbjct: 66 LPRATQQRTI----RESVQGRI------GGRTHEIQRMIGRAMRTAVELTKIGERTIWVD 115
Query: 148 ALLLEDGGSALAAALTAAALALADAGVEMY 177
+++ G A AA+T A +A+ADA ++++
Sbjct: 116 CDVIQADGGARTAAITGAFVAVADAIIKLH 145
>1OYR-A nrPDB
Length = 245
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 58/145 (40%), Gaps = 13/145 (8%)
Query: 31 RDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGPAGAGGEA-- 88
R LRP+ +S +GS + AG TKV+C S + RGGG E
Sbjct: 6 RQHDELRPITFDLDFISHPEGSVLITAGNTKVICNASVEDRVPPFLRGGGKGWITAEYSM 65
Query: 89 -PAALRGRLLCDFRRAPFAGRRRRAPPGGCEERELALALQEALEPAVRLGRYPRAQLEVS 147
P A R + + + +GR E+ + AL V L + + +
Sbjct: 66 LPRATNQRTIRESSKGKISGRT----------MEIQRLIGRALRAVVDLEKLGERTIWID 115
Query: 148 ALLLEDGGSALAAALTAAALALADA 172
+++ G A++T A LA+A A
Sbjct: 116 CDVIQADGGTRTASITGAFLAMAIA 140
>4NBQ-A nrPDB
Length = 715
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 69/153 (45%), Gaps = 25/153 (16%)
Query: 31 RDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGPAGAGGEAPA 90
RD +RP+ + G+L ++ GSA G T+ L + G ER A + +
Sbjct: 341 RDTKTVRPITVKVGVLPRSHGSALFTRGETQALVVTTL-----GTERD---AQSIDDLDG 392
Query: 91 ALRGRLLCDFRRAPF--------AGRRRRAPPGGCEERELALALQEALEPAV-RLGRYPR 141
+ + + PF +G +RR G LA + A+ P V L ++P
Sbjct: 393 DRQEEFIFHYNFPPFCVGEVGFMSGPKRREIGHG----RLA---KRAVVPVVPTLDKFPY 445
Query: 142 AQLEVSALLLEDGGSALAAALTAAALALADAGV 174
+ V + +LE GS+ A++ ++LAL DAGV
Sbjct: 446 V-IRVVSEILESNGSSSMASVCGSSLALMDAGV 477
>3B4T-A nrPDB
Length = 262
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 56/143 (39%), Gaps = 19/143 (13%)
Query: 36 LRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGPAGAG------GEAP 89
LRPV G GS +E G TKVLC S EG R G G P
Sbjct: 16 LRPVIITRGFTENPAGSVLIEFGHTKVLCTAS---VTEGVPRWRKATGLGWLTAEYAMLP 72
Query: 90 AALRGRLLCDFRRAPFAGRRRRAPPGGCEERELALALQEALEPAVRLGRYPRAQLEVSAL 149
+A R + R +GR +E++ + +L + L + +
Sbjct: 73 SATHSRSDRESVRGRLSGR----------TQEISRLIGRSLRACIDLAALGENTIAIDCD 122
Query: 150 LLEDGGSALAAALTAAALALADA 172
+L+ G AA+T A +ALADA
Sbjct: 123 VLQADGGTRTAAITGAYVALADA 145
>3DD6-A nrPDB
Length = 255
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Query: 31 RDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGPAGAGGE--- 87
R+ T LR ++ L +GS +E G TKV+C+ + + RG G E
Sbjct: 16 REKTELRHIHIHTNYLKHPEGSVLIEVGDTKVICSATIEERVPPFMRGEGKGWVTAEYAM 75
Query: 88 APAALRGRLLCDFRRAPFAGR 108
P A R + + + GR
Sbjct: 76 IPRATEQRTIRESSKGKVTGR 96
>1R6M-A nrPDB
Length = 239
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 64/154 (41%), Gaps = 25/154 (16%)
Query: 28 PGTRDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGPAGAGGE 87
P R +LRP+ A+GS +E G TKV+C VS AE G
Sbjct: 4 PSGRAADQLRPIRITRHYTKHAEGSVLVEFGDTKVICTVS----AESG------------ 47
Query: 88 APAALRGR----LLCDFRRAPFAG---RRRRAPPG--GCEERELALALQEALEPAVRLGR 138
P L+G+ L ++ P + +R A G G E+ + +L A+ L +
Sbjct: 48 VPRFLKGQGQGWLTAEYGMLPRSTGERNQREASRGKQGGRTLEIQRLIGRSLRAALDLSK 107
Query: 139 YPRAQLEVSALLLEDGGSALAAALTAAALALADA 172
L + +++ G A++T A +AL DA
Sbjct: 108 LGENTLYIDCDVIQADGGTRTASITGATVALIDA 141
>5XEX-A nrPDB
Length = 559
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 81/205 (39%), Gaps = 30/205 (14%)
Query: 22 ADEEEAPGTRDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVS----GPRQAEGGER 77
ADE+ P R P +RP+ + G+L + GS G T+ L ++ G Q
Sbjct: 314 ADEKIRPDGRKPDEIRPLDSEVGILPRTHGSGLFTRGQTQALSVLTLGALGDYQLID--- 370
Query: 78 GGGPAGAGGEAPAALRGRLLCDFR-------RAPFAGRRRRAPPGGCEERELALALQEAL 130
G GP E + +F RAP RR G ER L + +
Sbjct: 371 GLGPE----EEKRFMHHYNFPNFSVGETGPVRAP---GRREIGHGALGERALKYIIPDTA 423
Query: 131 EPAVRLGRYPRAQLEVSALLLEDGGSALAAALTAAALALADAGVEMYDLVVGCGLSLAP- 189
+ +P + + + +LE GS+ A++ + LAL DAGV + V G + L
Sbjct: 424 D-------FPYT-IRIVSEVLESNGSSSQASICGSTLALMDAGVPIKAPVAGIAMGLVTR 475
Query: 190 GPAPTWLLDPTRLEEERAAAGLTVA 214
+ T L D +E+ VA
Sbjct: 476 EDSYTILTDIQGMEDALGDMDFKVA 500
>5YJJ-A nrPDB
Length = 713
Score = 35.0 bits (79), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 80/207 (38%), Gaps = 34/207 (16%)
Query: 22 ADEEEAPGTRDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVS----GPRQAEGGER 77
ADE+ P R +RP+ + GLL +A GS G T+ L ++ G Q
Sbjct: 326 ADEKIRPDGRKVDEIRPLESEVGLLPRAHGSGLFTRGQTQALSVLTLGALGDYQLID--- 382
Query: 78 GGGPAGAGGEAPAALRGRLLCDFRRAPF---------AGRRRRAPPGGCEERELALALQE 128
G GP + R + + F A RR G ER L + +
Sbjct: 383 GLGP---------EVEKRFMHHYNFPNFSVGETGPVRAPGRREIGHGALGERALRYIIPD 433
Query: 129 ALEPAVRLGRYPRAQLEVSALLLEDGGSALAAALTAAALALADAGVEMYDLVVGCGLSLA 188
+ +P + + + +LE GS+ A++ + LAL DAGV + V G + L
Sbjct: 434 TQD-------FPYT-IRIVSEVLESNGSSSQASICGSTLALMDAGVPIKAPVAGIAMGLV 485
Query: 189 P-GPAPTWLLDPTRLEEERAAAGLTVA 214
+ T L D +E+ VA
Sbjct: 486 TRDDSYTILTDIQGMEDALGDMDFKVA 512
>2PO2-B nrPDB
Length = 277
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 37 RPVYARAGLLSQAKGSAYLEAGGTKVLCAVS 67
RP+ G++ +A+GSA ++ G T+VL +
Sbjct: 37 RPIEIEVGVIEKAEGSALVKLGSTQVLVGIK 67
>6D6R-C nrPDB
Length = 278
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 16/97 (16%)
Query: 28 PGTRDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGPAGAGGE 87
P R+ R G +S A GSA ++ G T V+C V +AE A +
Sbjct: 26 PDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVICGV----KAEF-------AAPSTD 74
Query: 88 APAALRGRLLCDFRRAPFAGRRRRA-PPGGCEERELA 123
AP +G ++ + P R R+ PPG EE ++A
Sbjct: 75 APD--KGYVVPNVDLPPLCSSRFRSGPPG--EEAQVA 107
>4ILS-A nrPDB
Length = 390
Score = 28.1 bits (61), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 35/86 (40%)
Query: 97 LCDFRRAPFAGRRRRAPPGGCEERELALALQEALEPAVRLGRYPRAQLEVSALLLEDGGS 156
+ DF R +A A E L + +V Y ++V+ LE G S
Sbjct: 1 MNDFHRDTWAEVDLDAIYDNVENLRRLLPDDTHIMASVCGNAYGHGDVQVARTALEAGAS 60
Query: 157 ALAAALTAAALALADAGVEMYDLVVG 182
LA A ALAL + G+E LV G
Sbjct: 61 RLAVAFLDEALALREKGIEAPILVTG 86
>3CDI-A nrPDB
Length = 723
Score = 28.1 bits (61), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 136 LGRYPRAQLEVSALLLEDGGSALAAALTAAALALADAGVEMYDLVVGCGLSLA 188
+ ++P + V + + E GS+ A++ A+LAL DAGV + V G + L
Sbjct: 424 MDKFPYT-VRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLV 475
>3H1C-A nrPDB
Length = 549
Score = 28.1 bits (61), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 136 LGRYPRAQLEVSALLLEDGGSALAAALTAAALALADAGVEMYDLVVGCGLSLA 188
+ ++P + V + + E GS+ A++ A+LAL DAGV + V G + L
Sbjct: 418 MDKFPYT-VRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLV 469
>4AIM-A nrPDB
Length = 726
Score = 27.3 bits (59), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 65/164 (39%), Gaps = 21/164 (12%)
Query: 31 RDPTRLRPVYARAGLLSQAKGSAYLEAGGTK-VLCAVSGPRQAEGGERGGGPAGAGGEAP 89
RD +RP+ G+L + GSA G T+ ++ A G G +
Sbjct: 335 RDVKTVRPILGEVGILPRTHGSALFTRGETQAIVVATLG-------------TGDDEQFI 381
Query: 90 AALRG----RLLCDFRRAPFAGRR--RRAPPGGCEERELALALQEALEPAVRLGRYPRAQ 143
AL G L + P++ R PG E LA + AL P +
Sbjct: 382 DALEGTYKESFLLHYNFPPYSVGETGRMGSPGRREIGHGKLAWR-ALRPMLPTKEDFPYT 440
Query: 144 LEVSALLLEDGGSALAAALTAAALALADAGVEMYDLVVGCGLSL 187
+ + + + E GS+ A + ++LA+ DAGV + V G + L
Sbjct: 441 IRLVSEITESNGSSSMATVCGSSLAMMDAGVPLVRPVSGIAMGL 484
>6D6K-A nrPDB
Length = 705
Score = 26.9 bits (58), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 68/172 (39%), Gaps = 35/172 (20%)
Query: 31 RDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVS--------------GPRQAEGGE 76
RD +R + + G+L +A GSA G T+ L + G +
Sbjct: 329 RDTKTVRALDVQVGVLERAHGSALFTRGETQALVTTTLGNTRDALMVDTLAGTKTDNFML 388
Query: 77 RGGGPAGAGGEAPAALRGRLLCDFRRAPFAGRRRRAPPGGCEERELALALQEALEPAVRL 136
PA + GE GR P +RR G R + +A+ PA
Sbjct: 389 HYNFPAYSVGET-----GR-----ESGP---KRREIGHGRLARRGV-----QAVLPAA-- 428
Query: 137 GRYPRAQLEVSALLLEDGGSALAAALTAAALALADAGVEMYDLVVGCGLSLA 188
R+P + + + + E GS+ A++ A+L+L DAGV + V G + L
Sbjct: 429 DRFPYV-IRIVSDITESNGSSSMASVCGASLSLMDAGVPLKAPVAGIAMGLV 479
>6IAA-A nrPDB
Length = 859
Score = 26.9 bits (58), Expect = 9.6, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 7/69 (10%)
Query: 131 EPAVRLGRYPRAQLEVSALLLEDGGSALAAALTAAALALADAGVEMYDLVVGCGLSLAPG 190
+P R P L ++ + D G + ALT A LA A +E+ D+ L
Sbjct: 353 QPNSRCSVSPTGDLTITNIQRSDAGYYICQALTVAGSILAKAQLEVTDV-------LTDR 405
Query: 191 PAPTWLLDP 199
P P L P
Sbjct: 406 PPPIILQGP 414
Searching..................................................done
Results from round 2
Score E
Sequences producing significant alignments: (bits) Value
Sequences used in model and found again:
6D6Q-F nrPDB 309 7e-85
2PO0-A nrPDB 241 3e-64
2JEA-B nrPDB 238 1e-63
2BA0-F nrPDB 237 4e-63
2WNR-B nrPDB 228 2e-60
4OO1-B nrPDB 208 1e-54
6D6Q-B nrPDB 204 4e-53
6D6Q-D nrPDB 168 3e-42
1UDQ-A nrPDB 167 3e-42
1OYR-A nrPDB 161 3e-40
3HKM-A nrPDB 160 8e-40
6FSZ-DD nrPDB 159 1e-39
3U1K-A nrPDB 145 3e-35
4NBQ-A nrPDB 143 6e-35
5K36-F nrPDB 134 4e-32
Sequences not found previously or not previously below threshold:
3DD6-A nrPDB 147 5e-36
1R6M-A nrPDB 139 1e-33
5YJJ-A nrPDB 133 8e-32
5XEX-A nrPDB 131 3e-31
4AIM-A nrPDB 119 1e-27
6D6K-A nrPDB 119 1e-27
3B4T-A nrPDB 119 2e-27
3H1C-A nrPDB 117 5e-27
3CDI-A nrPDB 116 8e-27
1E3H-A nrPDB 102 1e-22
3L7Z-A nrPDB 75 3e-14
6D6R-C nrPDB 66 2e-11
2BA1-H nrPDB 63 2e-10
2WNR-A nrPDB 61 4e-10
2PO2-B nrPDB 56 2e-08
6D6Q-E nrPDB 47 8e-06
5K36-E nrPDB 38 0.005
2NN6-A nrPDB 34 0.050
4M64-A nrPDB 33 0.14
5NLM-A nrPDB 33 0.15
6H25-A nrPDB 33 0.18
1JW1-A nrPDB 31 0.40
6NCL-b6 nrPDB 29 1.5
2W78-A nrPDB 29 2.1
5GIV-A nrPDB 29 2.3
4AMG-A nrPDB 28 4.5
>6D6Q-F nrPDB
Length = 272
Score = 309 bits (791), Expect = 7e-85, Method: Composition-based stats.
Identities = 272/272 (100%), Positives = 272/272 (100%)
Query: 1 MPGDHRRIRGPEESQPPQLYAADEEEAPGTRDPTRLRPVYARAGLLSQAKGSAYLEAGGT 60
MPGDHRRIRGPEESQPPQLYAADEEEAPGTRDPTRLRPVYARAGLLSQAKGSAYLEAGGT
Sbjct: 1 MPGDHRRIRGPEESQPPQLYAADEEEAPGTRDPTRLRPVYARAGLLSQAKGSAYLEAGGT 60
Query: 61 KVLCAVSGPRQAEGGERGGGPAGAGGEAPAALRGRLLCDFRRAPFAGRRRRAPPGGCEER 120
KVLCAVSGPRQAEGGERGGGPAGAGGEAPAALRGRLLCDFRRAPFAGRRRRAPPGGCEER
Sbjct: 61 KVLCAVSGPRQAEGGERGGGPAGAGGEAPAALRGRLLCDFRRAPFAGRRRRAPPGGCEER 120
Query: 121 ELALALQEALEPAVRLGRYPRAQLEVSALLLEDGGSALAAALTAAALALADAGVEMYDLV 180
ELALALQEALEPAVRLGRYPRAQLEVSALLLEDGGSALAAALTAAALALADAGVEMYDLV
Sbjct: 121 ELALALQEALEPAVRLGRYPRAQLEVSALLLEDGGSALAAALTAAALALADAGVEMYDLV 180
Query: 181 VGCGLSLAPGPAPTWLLDPTRLEEERAAAGLTVALMPVLNQVAGLLGSGEGGLTESWAEA 240
VGCGLSLAPGPAPTWLLDPTRLEEERAAAGLTVALMPVLNQVAGLLGSGEGGLTESWAEA
Sbjct: 181 VGCGLSLAPGPAPTWLLDPTRLEEERAAAGLTVALMPVLNQVAGLLGSGEGGLTESWAEA 240
Query: 241 VRLGLEGCQRLYPVLQQSLVRAARRRGAAAQP 272
VRLGLEGCQRLYPVLQQSLVRAARRRGAAAQP
Sbjct: 241 VRLGLEGCQRLYPVLQQSLVRAARRRGAAAQP 272
>2PO0-A nrPDB
Length = 249
Score = 241 bits (614), Expect = 3e-64, Method: Composition-based stats.
Identities = 81/249 (32%), Positives = 122/249 (48%), Gaps = 18/249 (7%)
Query: 15 QPPQLYAADEE-EAPGTRDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAE 73
+P L DE R LRP+ G+L A GSAY+E G K++ AV GPR+
Sbjct: 4 KPEGLKLIDENGRRIDGRKKYELRPIKMEVGVLKNANGSAYIEWGKNKIIAAVYGPRELH 63
Query: 74 GGERGGGPAGAGGEAPAALRGRLLCDFRRAPFAGRRRRAPPGGCEERELALALQEALEPA 133
P A LR R + APF+ R+ P E++ ++ ALEPA
Sbjct: 64 -------PKHLQRPDRAILRVR----YNMAPFSVEERKKPGPDRRSIEISKVIKGALEPA 112
Query: 134 VRLGRYPRAQLEVSALLLEDGGSALAAALTAAALALADAGVEMYDLVVGCGLSLAPGPAP 193
+ L +PR ++V +L+ A +TAA+LALADAG+ M DLV C G
Sbjct: 113 LILEMFPRTAIDVFIEVLQADAGTRVAGITAASLALADAGIPMRDLVAACAAGKIEGE-- 170
Query: 194 TWLLDPTRLEEERAAAGLTVALMPVLNQVAGLLGSGEGGLT-ESWAEAVRLGLEGCQRLY 252
+LD + E+ A + VA+MP+ N + L +G LT + + EAV+L ++G + +Y
Sbjct: 171 -IVLDLNKEEDNYGEADVPVAIMPLKNDITLL--QMDGYLTKDEFIEAVKLAIKGAKAVY 227
Query: 253 PVLQQSLVR 261
+++L
Sbjct: 228 QKQREALKE 236
>2JEA-B nrPDB
Length = 250
Score = 238 bits (608), Expect = 1e-63, Method: Composition-based stats.
Identities = 79/244 (32%), Positives = 119/244 (48%), Gaps = 18/244 (7%)
Query: 17 PQLYAADEEEAPGTRDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGE 76
P+L D + G R P LR + G+L A GSA E G TK + AV GP++
Sbjct: 12 PKLILDDGKRTDG-RKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGPKEMH--- 67
Query: 77 RGGGPAGAGGEAPAALRGRLLCDFRRAPFAGRRRRAPPGGCEERELALALQEALEPAVRL 136
P A LR R + PF+ R+ P E EL+ ++EALE AV +
Sbjct: 68 ----PRHLSLPDRAVLRVR----YHMTPFSTDERKNPAPSRREIELSKVIREALESAVLV 119
Query: 137 GRYPRAQLEVSALLLEDGGSALAAALTAAALALADAGVEMYDLVVGCGLSLAPGPAPTWL 196
+PR ++V +L+ + +L AA+LALADAG+ M DL+ G + A G +
Sbjct: 120 ELFPRTAIDVFTEILQADAGSRLVSLMAASLALADAGIPMRDLIAGVAVGKADG---VII 176
Query: 197 LDPTRLEEERAAAGLTVALMPVLNQVAGLLGSGEGGLT-ESWAEAVRLGLEGCQRLYPVL 255
LD E A + +A+MP LNQV L G +T + + +A L ++G +Y +
Sbjct: 177 LDLNETEAMWGEADMPIAMMPSLNQVT--LFQLNGSMTPDEFRQAFDLAVKGINIIYNLE 234
Query: 256 QQSL 259
+++L
Sbjct: 235 REAL 238
>2BA0-F nrPDB
Length = 258
Score = 237 bits (604), Expect = 4e-63, Method: Composition-based stats.
Identities = 65/249 (26%), Positives = 116/249 (46%), Gaps = 18/249 (7%)
Query: 15 QPPQLYAADEEEAPGTRDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEG 74
+P +L R LRP+ A +L +A GS YLE G KV+ AV GPR+
Sbjct: 7 KPEKLIVDGL--RLDGRKFDELRPIKIEASVLKRADGSCYLEMGKNKVIAAVFGPREVH- 63
Query: 75 GERGGGPAGAGGEAPAALRGRLLCDFRRAPFAGRRRRAPPGGCEERELALALQEALEPAV 134
P + A +R R + APF+ R+ P E++ +EA E +
Sbjct: 64 ------PRHLQDPSKAIIRYR----YNMAPFSVEERKRPGPDRRSIEISKVSKEAFEAVI 113
Query: 135 RLGRYPRAQLEVSALLLEDGGSALAAALTAAALALADAGVEMYDLVVGCGLSLAPGPAPT 194
+PR+ +++ +L+ + A L AA++AL DAGV M ++ + A G
Sbjct: 114 MKELFPRSAIDIFVEVLQADAGSRTACLNAASVALVDAGVPMKGMITSVAVGKADG---Q 170
Query: 195 WLLDPTRLEEERAAAGLTVALMPVLNQVAGL-LGSGEGGLT-ESWAEAVRLGLEGCQRLY 252
+LDP + E+ A + A + ++ + L +G +T + +A+ L +G ++Y
Sbjct: 171 LVLDPMKEEDNFGEADMPFAFLIRNGKIESIALLQMDGRMTRDEVKQAIELAKKGALQIY 230
Query: 253 PVLQQSLVR 261
+ +++++R
Sbjct: 231 EMQREAILR 239
>2WNR-B nrPDB
Length = 240
Score = 228 bits (582), Expect = 2e-60, Method: Composition-based stats.
Identities = 78/236 (33%), Positives = 123/236 (52%), Gaps = 17/236 (7%)
Query: 27 APGTRDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGPAGAGG 86
R LRP+ AG+L +A GS+YLE GG K+L AV GPR+A+ +
Sbjct: 17 REDGRAFDELRPLKIEAGILERADGSSYLEFGGNKILVAVYGPREAQIRK---------- 66
Query: 87 EAPAALRGRLLCDFRRAPFAGRRRRAPPGGCEERELALALQEALEPAVRLGRYPRAQLEV 146
R + C + APF+ R+ P E++ EAL PA+ L ++PR+ ++V
Sbjct: 67 -LQRPDRAVIRCRYNMAPFSVEERKRPGPDRRSVEISKITAEALRPALILEKFPRSVIDV 125
Query: 147 SALLLEDGGSALAAALTAAALALADAGVEMYDLVVGCGLSLAPGPAPTWLLDPTRLEEER 206
+LE G A +TAA++ALADAG+ M D+VV C +LD + E++
Sbjct: 126 FIEVLEAEGGTRCAGITAASVALADAGIPMRDMVVACAAGKV---GDQVVLDLSEEEDKE 182
Query: 207 AAAGLTVALMPVLNQVAGLLGSGEGGLT-ESWAEAVRLGLEGCQRLYPVLQQSLVR 261
A + VA++P ++ L +G LT E + A+ L +EGC R++ V +++L +
Sbjct: 183 GQADVPVAILPRTREITLL--QSDGNLTPEEFERALDLAVEGCLRIHEVQKEALRK 236
>4OO1-B nrPDB
Length = 250
Score = 208 bits (530), Expect = 1e-54, Method: Composition-based stats.
Identities = 64/264 (24%), Positives = 113/264 (42%), Gaps = 20/264 (7%)
Query: 10 GPEESQPPQLYAADEEEAPGTRDPTRLRPVYARAGLLSQA-KGSAYLEAGGTKVLCAVSG 68
GP+ ++Y+ + G R LR + A GS+Y+E G K++ V G
Sbjct: 1 GPDHMSRLEIYSPEGLRLDG-RRWNELRRFESSINTHPHAADGSSYMEQGNNKIITLVKG 59
Query: 69 PRQAEGGERGGGPAGAGGEAPAALRGRLLCDFRRAPFAGRRRRAPPGGCEER--ELALAL 126
P++ + + AL L F+ R E R E+ +L
Sbjct: 60 PKEPR--------LKSQMDTSKAL---LNVSVNITKFSKFERSKSSHKNERRVLEIQTSL 108
Query: 127 QEALEPAVRLGRYPRAQLEVSALLLEDGGSALAAALTAAALALADAGVEMYDLVVGCGLS 186
E V L YPR +++ +LE G + + + LAL DAG+ M+D + G +
Sbjct: 109 VRMFEKNVMLNIYPRTVIDIEIHVLEQDGGIMGSLINGITLALIDAGISMFDYISGISVG 168
Query: 187 LAPGPAPTWLLDPTRLEEERAAAGLTVALMPVLNQVAGLLGSGEGGLTESWAEAVRLGLE 246
L T LLD LEE A + +T+ ++ +++ LL + L + + +G+
Sbjct: 169 LYD---TTPLLDTNSLEEN-AMSTVTLGVVGKSEKLSLLLVEDKIPL-DRLENVLAIGIA 223
Query: 247 GCQRLYPVLQQSLVRAARRRGAAA 270
G R+ ++ + L + A++R + A
Sbjct: 224 GAHRVRDLMDEELRKHAQKRVSNA 247
>6D6Q-B nrPDB
Length = 249
Score = 204 bits (518), Expect = 4e-53, Method: Composition-based stats.
Identities = 71/248 (28%), Positives = 113/248 (45%), Gaps = 17/248 (6%)
Query: 20 YAADEEEAPGTRDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGG 79
+D+ R LR + AR G+ +QA GSAY+E G TK L V GP + G
Sbjct: 10 LLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRGSRARA 69
Query: 80 GPAGAGGEAPAALRGRLLCDFRRAPFA-GRRRRAPPGGCEERELALALQEALEPAVRLGR 138
P R + C + A F+ G R+R P G + E+ L L++ E A+
Sbjct: 70 LPD----------RALVNCQYSSATFSTGERKRRPHGDRKSCEMGLQLRQTFEAAILTQL 119
Query: 139 YPRAQLEVSALLLEDGGSALAAALTAAALALADAGVEMYDLVVGCGLSLAPGPAPTWLLD 198
+PR+Q+++ +L+ G AA + AA LA+ DAG+ M D V C G T L D
Sbjct: 120 HPRSQIDIYVQVLQADGGTYAACVNAATLAVLDAGIPMRDFVCACSAGFVDG---TALAD 176
Query: 199 PTRLEEERAAAGLTVALMPVLNQVAGLLGSGEGGL-TESWAEAVRLGLEGCQRLYPVLQQ 257
+ +EE L +AL+P Q+A L + L + + + + ++ +L +
Sbjct: 177 LSHVEEAAGGPQLALALLPASGQIALL--EMDARLHEDHLERVLEAAAQAARDVHTLLDR 234
Query: 258 SLVRAARR 265
+ + R
Sbjct: 235 VVRQHVRE 242
>6D6Q-D nrPDB
Length = 237
Score = 168 bits (424), Expect = 3e-42, Method: Composition-based stats.
Identities = 64/232 (27%), Positives = 96/232 (41%), Gaps = 25/232 (10%)
Query: 35 RLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGPAGAGGEAPAALRG 94
LR LLS+ GSA G T VL V GP + + + A LR
Sbjct: 29 SLRHFACEQNLLSRPDGSASFLQGDTSVLAGVYGPAEVKVSKEIFNKA----TLEVILRP 84
Query: 95 RLLCDFRRAPFAGRRRRAPPGGCEERELALALQEALEPAVRLGRYPRAQLEVSALLLEDG 154
++ G E+ ++ E V +PR + V ++ D
Sbjct: 85 KIGL----------------PGVAEKSRERLIRNTCEAVVLGTLHPRTSITVVLQVVSDA 128
Query: 155 GSALAAALTAAALALADAGVEMYDLVVGCGLSLAPGPAPTWLLDPTRLEEERAAAGLTVA 214
GS LA L AA +AL DAGV M L CG++ A T +LDPT +E+ A A LT A
Sbjct: 129 GSLLACCLNAACMALVDAGVPMRALF--CGVACALDSDGTLVLDPTSKQEKEARAVLTFA 186
Query: 215 LMPVLNQVAGLLGSGEGGLTE-SWAEAVRLGLEGCQRLYPVLQQSLVRAARR 265
L V ++ L+ S +G ++ + + Q ++ ++SL R +
Sbjct: 187 LDSVERKL--LMSSTKGLYSDTELQQCLAAAQAASQHVFRFYRESLQRRYSK 236
>1UDQ-A nrPDB
Length = 255
Score = 167 bits (423), Expect = 3e-42, Method: Composition-based stats.
Identities = 51/246 (20%), Positives = 83/246 (33%), Gaps = 28/246 (11%)
Query: 27 APGTRDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGPAGAGG 86
R +LRPV + L +GS + G TKV+C S +G G
Sbjct: 2 RSDGRKEDQLRPVSIQRDFLEYPEGSCLISFGKTKVICTASVIENVPNWLKGKGQGWITA 61
Query: 87 EA---PAALRGRLLCDFRRAPFAGRRRRAPPGGCEERELALALQEALEPAVRLGRYPRAQ 143
E P A + R + R G E+ + A+ AV L +
Sbjct: 62 EYSMLPRATQQRTI----------RESVQGRIGGRTHEIQRMIGRAMRTAVELTKIGERT 111
Query: 144 LEVSALLLEDGGSALAAALTAAALALADAGV-----------EMYDLVVGCGLSLAPGPA 192
+ V +++ G A AA+T A +A+ADA + + D V + +
Sbjct: 112 IWVDCDVIQADGGARTAAITGAFVAVADAIIKLHKEGIIEETPIKDFVAAVSVGIVND-- 169
Query: 193 PTWLLDPTRLEEERAAAGLTVALMPVLNQVAGLLGSGEGGLT-ESWAEAVRLGLEGCQRL 251
LLD E+ A + V E T + + + L +G L
Sbjct: 170 -RILLDLNFEEDSAAQVDMNVVGTGSGRLSEVHTMGEEYSFTKDELIKMLDLAQKGINEL 228
Query: 252 YPVLQQ 257
+ ++
Sbjct: 229 IELQKK 234
>1OYR-A nrPDB
Length = 245
Score = 161 bits (407), Expect = 3e-40, Method: Composition-based stats.
Identities = 51/248 (20%), Positives = 84/248 (33%), Gaps = 27/248 (10%)
Query: 27 APGTRDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGPAGAGG 86
R LRP+ +S +GS + AG TKV+C S + RGGG
Sbjct: 2 RHDGRQHDELRPITFDLDFISHPEGSVLITAGNTKVICNASVEDRVPPFLRGGGKGWITA 61
Query: 87 EA---PAALRGRLLCDFRRAPFAGRRRRAPPGGCEERELALALQEALEPAVRLGRYPRAQ 143
E P A R + + + +G E+ + AL V L +
Sbjct: 62 EYSMLPRATNQRTIRESSKGKISG----------RTMEIQRLIGRALRAVVDLEKLGERT 111
Query: 144 LEVSALLLEDGGSALAAALTAAALALADAG-----------VEMYDLVVGCGLSLAPGPA 192
+ + +++ G A++T A LA+A A + D + + +
Sbjct: 112 IWIDCDVIQADGGTRTASITGAFLAMAIAIGKLIKAGTIKTNPITDFLAAISVGI--DKE 169
Query: 193 PTWLLDPTRLEEERAAAGLTVALMPVLNQVAGLLGSGEGGLT-ESWAEAVRLGLEGCQRL 251
LLD E+ A + V + V E + E + L +G Q L
Sbjct: 170 QGILLDLNYEEDSSAEVDMNVIMTGSGRFVELQGTGEEATFSREDLNGLLGLAEKGIQEL 229
Query: 252 YPVLQQSL 259
++ L
Sbjct: 230 IDKQKEVL 237
>3HKM-A nrPDB
Length = 246
Score = 160 bits (403), Expect = 8e-40, Method: Composition-based stats.
Identities = 60/256 (23%), Positives = 97/256 (37%), Gaps = 39/256 (15%)
Query: 24 EEEAPGTRDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGPAG 83
EE R+P +LRP L +A GSA G T VL AV GP+ G +G P
Sbjct: 2 EESRADGRNPNQLRPFSCTRNPLDRAHGSARWAQGDTIVLAAVYGPK--PGTRKGENPEK 59
Query: 84 AGGEAPAALRGRLLCDFRRAPFAGRRRRAPPGGCEERELALALQEALEPAVRLGRYPRAQ 143
A E P G+ G +E+E + L+ L+ L +P
Sbjct: 60 ASIEVVW------------KPMTGQI------GKQEKEYEMTLKRTLQSICLLTVHPNTT 101
Query: 144 LEVSALLLEDGGSALAAALTAAALALADAGVEMYDLVVGCGLSLAPGPAPTWLLDPTRLE 203
V ++ + GS L A+ A AL AG+ + L V G + +LD + E
Sbjct: 102 TSVILQVVGNDGSLLPCAINACCAALVFAGIPLKHLAVAIGCGVL--EDGEVILDTNKAE 159
Query: 204 EERAAAGLTVALMPVLNQVA---------------GLLGSGEGGLTES-WAEAVRLGLEG 247
E++ + + + P + A + G ++E + + GL
Sbjct: 160 EQQLKSFAHL-VFPNSRKSASSKEPNQKEEDSERGLITSITHGVMSEEDYFSCIERGLAA 218
Query: 248 CQRLYPVLQQSLVRAA 263
R+ ++ +L + A
Sbjct: 219 SSRISDFMRTTLQKQA 234
>6FSZ-DD nrPDB
Length = 245
Score = 159 bits (401), Expect = 1e-39, Method: Composition-based stats.
Identities = 55/250 (22%), Positives = 103/250 (41%), Gaps = 35/250 (14%)
Query: 22 ADEEEAPGTRDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGP 81
+ ++ V A G+L GS+ + TKV+C+V+GP + +
Sbjct: 9 NTKNRLDSAEKKKKM-SVQAEIGILDHVDGSSEFVSQDTKVICSVTGPIEPK-------- 59
Query: 82 AGAGGEAPAALRGRLLCDFRRAPFAGRRRRAPPGGCEERELALALQEALEPAVRLGRYPR 141
A E P L ++ R A R E+ L L+ L P + YPR
Sbjct: 60 --ARQELPTQLALEII--VRPAKGVATTR--------EKVLEDKLRAVLTPLITRHCYPR 107
Query: 142 AQLEVSALLLEDGGS-------ALAAALTAAALALADAGVEMYDLVVGCGLSLAPGPAPT 194
+++ +LE G L+ + AA LAL DAG+ + + +++ +
Sbjct: 108 QLCQITCQILESGEDEAEFSLRELSCCINAAFLALVDAGIALNSMCASIPIAIIKDTSD- 166
Query: 195 WLLDPTRLEEERAAAGLTVALM-----PVLNQVAGLLGSGEGGLTESWAEAVRLGLEGCQ 249
++DPT + + + + T+AL V+ V L +G+ + ++ + LG + CQ
Sbjct: 167 IIVDPTAEQLKISLSVHTLALEFVNGGKVVKNVLLLDSNGDFNEDQLFS-LLELGEQKCQ 225
Query: 250 RLYPVLQQSL 259
L +++ +
Sbjct: 226 ELVTNIRRII 235
>3DD6-A nrPDB
Length = 255
Score = 147 bits (370), Expect = 5e-36, Method: Composition-based stats.
Identities = 44/248 (17%), Positives = 85/248 (34%), Gaps = 27/248 (10%)
Query: 27 APGTRDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGPAGAGG 86
R+ T LR ++ L +GS +E G TKV+C+ + + RG G
Sbjct: 12 RVDGREKTELRHIHIHTNYLKHPEGSVLIEVGDTKVICSATIEERVPPFMRGEGKGWVTA 71
Query: 87 EA---PAALRGRLLCDFRRAPFAGRRRRAPPGGCEERELALALQEALEPAVRLGRYPRAQ 143
E P A R + + + G E+ + AL V L
Sbjct: 72 EYAMIPRATEQRTIRESSKGKVTG----------RTMEIQRLIGRALRAVVDLEALGERT 121
Query: 144 LEVSALLLEDGGSALAAALTAAALALADA-----------GVEMYDLVVGCGLSLAPGPA 192
+ + +++ G A++T A +A+ A + + D + + +
Sbjct: 122 VWIDCDVIQADGGTRTASITGAYVAMVLAFEKLLQAEKVSKIPVKDYLAATSVGIVEEQG 181
Query: 193 PTWLLDPTRLEEERAAAGLTVALMPVLNQVAGLLGSGEGGLTE-SWAEAVRLGLEGCQRL 251
+LD E+ +A + V + V E + E + +G +L
Sbjct: 182 --VVLDLNYAEDSKADVDMNVIMTGKGQFVEVQGTGEEATFSRAQLNELLDAAEQGIFQL 239
Query: 252 YPVLQQSL 259
+ +++L
Sbjct: 240 IDIQKEAL 247
>3U1K-A nrPDB
Length = 630
Score = 145 bits (364), Expect = 3e-35, Method: Composition-based stats.
Identities = 52/260 (20%), Positives = 92/260 (35%), Gaps = 21/260 (8%)
Query: 23 DEEEAPGTRDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGPA 82
+E + RD T LR V + GSA + G T+VLC V+ G +
Sbjct: 315 NEYKRCDGRDLTSLRNVSCEVDMFKTLHGSALFQRGQTQVLCTVTFDSLESGIKSDQVIT 374
Query: 83 GAGGEAPAALRGRLLCDFRRAPFAGRRRRAPPGGCEEREL--ALALQEALEPAVRLGRYP 140
G + + P+A G REL ++AL P + +P
Sbjct: 375 AINGIKDK----NFMLHYEFPPYA-TNEIGKVTGLNRRELGHGALAEKALYPVIPRD-FP 428
Query: 141 RAQLEVSALLLEDGGSALAAALTAAALALADAGVEMYDLVVGCGLSLAPGPAPT------ 194
+ V++ +LE GS+ A+ +LAL D+GV + V G + L P
Sbjct: 429 -FTIRVTSEVLESNGSSSMASACGGSLALMDSGVPISSAVAGVAIGLVTKTDPEKGEIED 487
Query: 195 --WLLDPTRLEEERAAAGLTVALMPVLNQVAGL--LGSGEGGLTESWAEAVRLGLEGCQR 250
L D +E+ + + + L G + EA++ +
Sbjct: 488 YRLLTDILGIEDYNG--DMDFKIAGTNKGITALQADIKLPGIPIKIVMEAIQQASVAKKE 545
Query: 251 LYPVLQQSLVRAARRRGAAA 270
+ ++ +++ + R
Sbjct: 546 ILQIMNKTISKPRASRKENG 565
Score = 67.6 bits (163), Expect = 6e-12, Method: Composition-based stats.
Identities = 47/213 (22%), Positives = 88/213 (41%), Gaps = 19/213 (8%)
Query: 37 RPVYARAGLLSQ-AKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGPAGAGGEAPAALRGR 95
R + +G L++ A GSA +++G T V+ V+ + + P AA GR
Sbjct: 15 RKLEISSGKLARFADGSAVVQSGDTAVM--VTAVSKTKPSPSQFMPLVVDYRQKAAAAGR 72
Query: 96 LLCDFRRAPFAGRRRRAPPGGCEERELALALQEALEPAVRLGRYPRAQLEVSALLLEDGG 155
+ ++ RR +E + + ++ P G + Q V LL G
Sbjct: 73 IPTNY--------LRREVGTSDKEILTSRIIDRSIRPLFPAGYFYDTQ--VLCNLLAVDG 122
Query: 156 SALA--AALTAAALALADAGVEMYDLVVGCGLSLAPGPAPTWLLDPTRLEEERAAAGLTV 213
A+ A++AL+ + + V + + G ++++PTR E + L V
Sbjct: 123 VNEPDVLAINGASVALSLSDIPWNGPVGAVRIGIIDGE---YVVNPTRKEMSSSTLNLVV 179
Query: 214 ALMPVLNQVAGLLGSGEGGLTESWAEAVRLGLE 246
A P Q+ L S E L + + A+++G++
Sbjct: 180 AGAPKS-QIVMLEASAENILQQDFCHAIKVGVK 211
>4NBQ-A nrPDB
Length = 715
Score = 143 bits (361), Expect = 6e-35, Method: Composition-based stats.
Identities = 55/253 (21%), Positives = 94/253 (37%), Gaps = 13/253 (5%)
Query: 23 DEEEAPGTRDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGPA 82
+ RD +RP+ + G+L ++ GSA G T+ L + G ER A
Sbjct: 333 TGQPRIDGRDTKTVRPITVKVGVLPRSHGSALFTRGETQALVVTTL-----GTERD---A 384
Query: 83 GAGGEAPAALRGRLLCDFRRAPF-AGRRRRAPPGGCEERELALALQEALEPAV-RLGRYP 140
+ + + + + PF G E + A+ P V L ++P
Sbjct: 385 QSIDDLDGDRQEEFIFHYNFPPFCVGEVGFMSGPKRREIGHGRLAKRAVVPVVPTLDKFP 444
Query: 141 RAQLEVSALLLEDGGSALAAALTAAALALADAGVEMYDLVVGCGLSLAPGPAPTWLL-DP 199
+ V + +LE GS+ A++ ++LAL DAGV V G + L +L D
Sbjct: 445 Y-VIRVVSEILESNGSSSMASVCGSSLALMDAGVPTKAPVAGIAMGLIKENDKYAVLSDI 503
Query: 200 TRLEEERAAAGLTVALMPVLNQVAGLLGSGEGGLTESWAEAVRLGLEGCQRLYPVLQQSL 259
E+ VA + EG E +A+ EG + ++ + L
Sbjct: 504 LGDEDHLGDMDFKVAGTSNGVTALQMDIKIEGITKEIMEQALDQAKEGRLHILSIMNKVL 563
Query: 260 VRAARRRGAAAQP 272
+ R + + P
Sbjct: 564 DK-PRSQVSDLAP 575
Score = 40.2 bits (92), Expect = 0.001, Method: Composition-based stats.
Identities = 36/177 (20%), Positives = 66/177 (37%), Gaps = 13/177 (7%)
Query: 39 VYARAGLLSQ-AKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGPAGAGGEAPAALRGRLL 97
V G +++ A G+ + G T +L +V ++AE G R P + G++
Sbjct: 34 VTFETGEMARQATGAVVVRMGDTVLLVSVVAKKEAEEG-RDFFPLTVNYQEKTYAAGKI- 91
Query: 98 CDFRRAPFAGRRRRAPPGGCEERELALALQEALEPAVRLGRYPRAQLEVSALLLEDGGSA 157
P +R P E + + L P G Q+ + L ++
Sbjct: 92 ------PGGYFKREGRPTEKETL-TSRLIDRPLRPLFPKGFTNEVQVIATVLSVDSKVPT 144
Query: 158 LAAALTAAALALADAGVEMYDLVVGCGLSLAPGPAPTWLLDPTRLEEERAAAGLTVA 214
A+ A+ A+ +G+ G + +LL+P+ E + +A L VA
Sbjct: 145 DIPAILGASAAIGLSGIPFNG---SLGAARVGYRGGEYLLNPSLDELKDSALDLVVA 198
>1R6M-A nrPDB
Length = 239
Score = 139 bits (350), Expect = 1e-33, Method: Composition-based stats.
Identities = 51/246 (20%), Positives = 83/246 (33%), Gaps = 22/246 (8%)
Query: 26 EAPGTRDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGPAGAG 85
P R +LRP+ A+GS +E G TKV+C VS +G G
Sbjct: 2 NRPSGRAADQLRPIRITRHYTKHAEGSVLVEFGDTKVICTVSAESGVPRFLKGQGQGWLT 61
Query: 86 GEAPAALRGRLLCDFRRAPFAGRRRRAPPGGCEERELALALQEALEPAVRLGRYPRAQLE 145
E R R G E+ + +L A+ L + L
Sbjct: 62 AEYGMLPR-------STGERNQREASRGKQGGRTLEIQRLIGRSLRAALDLSKLGENTLY 114
Query: 146 VSALLLEDGGSALAAALTAAALALADA-----------GVEMYDLVVGCGLSLAPGPAPT 194
+ +++ G A++T A +AL DA G + +V + + G
Sbjct: 115 IDCDVIQADGGTRTASITGATVALIDALAVLKKRGALKGNPLKQMVAAVSVGIYQG---V 171
Query: 195 WLLDPTRLEEERAAAGLTVALMPVLNQVAGL-LGSGEGGLTESWAEAVRLGLEGCQRLYP 253
+LD LE+ A L V + + G + L +G Q L+
Sbjct: 172 PVLDLDYLEDSAAETDLNVVMTDAGGFIEVQGTAEGAPFRPAELNAMLELAQQGMQELFE 231
Query: 254 VLQQSL 259
+ + +L
Sbjct: 232 LQRAAL 237
>5K36-F nrPDB
Length = 250
Score = 134 bits (336), Expect = 4e-32, Method: Composition-based stats.
Identities = 51/225 (22%), Positives = 82/225 (36%), Gaps = 57/225 (25%)
Query: 4 DHRRIRGPEESQPPQLYAADEEEAPGTRDPTRLRP--------VYARAGLLSQAKGSAYL 55
D RR+ GP ++P ++ P + T L P + G + GSA +
Sbjct: 5 DRRRLLGPAAAKP-MAFSNTTTHVP-EKKSTDLTPKGNESEQELSLHTGFIENCNGSALV 62
Query: 56 EA----GGTKVLCAVSGPRQAEGGERGGGPAGAGGEAPAALRGRLLCDFRRAPFAGRRRR 111
EA T ++ AV GPR G + G L+ LL +
Sbjct: 63 EARSLGHQTSLITAVYGPRSIRGS------FTSQGTISIQLKNGLLEKYNTN-------- 108
Query: 112 APPGGCEERELALALQEALEPAVRLGRYPRAQLEVSALLLEDG----------------- 154
E +E++ L V L RYP++ +++ L D
Sbjct: 109 ------ELKEVSSFLMGIFNSVVNLSRYPKSGIDIFVYLTYDKDLTNNPQDDDSQSKMMS 162
Query: 155 ---GSALAAALTAAALALADAGVEMYDLVVGCGLSLAPGPAPTWL 196
S + +T+ LALADAG+E+ D+ G A G +++
Sbjct: 163 SQISSLIPHCITSITLALADAGIELVDMA---GAGEANGTVVSFI 204
>5YJJ-A nrPDB
Length = 713
Score = 133 bits (334), Expect = 8e-32, Method: Composition-based stats.
Identities = 53/259 (20%), Positives = 89/259 (34%), Gaps = 19/259 (7%)
Query: 20 YAADEEEAPGTRDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGG 79
ADE+ P R +RP+ + GLL +A GS G T+ L ++
Sbjct: 324 LIADEKIRPDGRKVDEIRPLESEVGLLPRAHGSGLFTRGQTQALSVLT--------LGAL 375
Query: 80 GPAGAGGEAPAALRGRLLCDFRRAPFA-GRRRRAPPGGCEERELALALQEALEPAV-RLG 137
G + R + + F+ G G E + AL +
Sbjct: 376 GDYQLIDGLGPEVEKRFMHHYNFPNFSVGETGPVRAPGRREIGHGALGERALRYIIPDTQ 435
Query: 138 RYPRAQLEVSALLLEDGGSALAAALTAAALALADAGVEMYDLVVGCGLSLAPGPAP-TWL 196
+P + + + +LE GS+ A++ + LAL DAGV + V G + L T L
Sbjct: 436 DFPYT-IRIVSEVLESNGSSSQASICGSTLALMDAGVPIKAPVAGIAMGLVTRDDSYTIL 494
Query: 197 LDPTRLEEERAAAGLTVALMPVLNQVAGLLGSGEGGLTESWAEAVRLGLEGCQRLYPVL- 255
D +E+ VA + +G E EA+ +G + +
Sbjct: 495 TDIQGMEDALGDMDFKVAGTKDGITAIQMDIKIDGLTREVIEEALEQARQGRLAIMDHML 554
Query: 256 ------QQSLVRAARRRGA 268
++ L A +
Sbjct: 555 HTIEQPREELSAYAPKVVT 573
Score = 56.8 bits (135), Expect = 9e-09, Method: Composition-based stats.
Identities = 42/229 (18%), Positives = 83/229 (36%), Gaps = 26/229 (11%)
Query: 37 RPVYARAGLL-SQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGPAGAGGEAPAALRGR 95
R + G L QA G+ + G T VL + ++ G P E G+
Sbjct: 27 RSLTIETGQLAKQANGAVLVRYGDTVVLSTATASKEPRDG--DFFPLTVNYEEKMYAAGK 84
Query: 96 LLCDFRRAPFAGRRRRAPPGGCEERELALALQEALEPAVRLGRYP---RAQLEVSALLLE 152
+ G ++R G E A + + P +P R +++ ++L
Sbjct: 85 IP--------GGFKKREGRPGDEATLTARLIDRPIRP-----LFPKGYRHDVQIMNIVLS 131
Query: 153 DGGSALA--AALTAAALALADAGVEMYDLVVGCGLSLAPGPAPTWLLDPTRLEEERAAAG 210
AA+ +++AL+ + + + G + G ++++P+ ++E +
Sbjct: 132 ADPDCSPEMAAMIGSSMALSVSDIPFQGPIAGVNVGYIDG---KYVINPSVADKEISRLD 188
Query: 211 LTVALMPVLNQVAGLLGSGEGGLTESWAEAVRLGLEGCQRLYPVLQQSL 259
L VA + V + EA+ G E +RL Q+ +
Sbjct: 189 LEVA--GHKDAVNMVEAGASEITESEMLEAIFFGHEEIKRLVAFQQEII 235
>5XEX-A nrPDB
Length = 559
Score = 131 bits (329), Expect = 3e-31, Method: Composition-based stats.
Identities = 51/243 (20%), Positives = 86/243 (35%), Gaps = 12/243 (4%)
Query: 20 YAADEEEAPGTRDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGG 79
ADE+ P R P +RP+ + G+L + GS G T+ L ++
Sbjct: 312 LIADEKIRPDGRKPDEIRPLDSEVGILPRTHGSGLFTRGQTQALSVLT--------LGAL 363
Query: 80 GPAGAGGEAPAALRGRLLCDFRRAPFA-GRRRRAPPGGCEERELALALQEALEPAV-RLG 137
G R + + F+ G G E + AL+ +
Sbjct: 364 GDYQLIDGLGPEEEKRFMHHYNFPNFSVGETGPVRAPGRREIGHGALGERALKYIIPDTA 423
Query: 138 RYPRAQLEVSALLLEDGGSALAAALTAAALALADAGVEMYDLVVGCGLSLAPGPAP-TWL 196
+P + + + +LE GS+ A++ + LAL DAGV + V G + L T L
Sbjct: 424 DFPYT-IRIVSEVLESNGSSSQASICGSTLALMDAGVPIKAPVAGIAMGLVTREDSYTIL 482
Query: 197 LDPTRLEEERAAAGLTVALMPVLNQVAGLLGSGEGGLTESWAEAVRLGLEGCQRLYPVLQ 256
D +E+ VA + +G E EA+ G + +
Sbjct: 483 TDIQGMEDALGDMDFKVAGTKEGITAIQMDIKIDGLTREIIEEALEQARRGRLEIMNHML 542
Query: 257 QSL 259
Q++
Sbjct: 543 QTI 545
Score = 60.3 bits (144), Expect = 9e-10, Method: Composition-based stats.
Identities = 45/227 (19%), Positives = 84/227 (37%), Gaps = 26/227 (11%)
Query: 37 RPVYARAGLL-SQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGPAGAGGEAPAALRGR 95
R + G L QA G+ + G T VL + ++ G P E G+
Sbjct: 15 RSLTIETGQLAKQANGAVLVRYGDTVVLSTATASKEPRDG--DFFPLTVNYEEKMYAAGK 72
Query: 96 LLCDFRRAPFAGRRRRAPPGGCEERELALALQEALEPAVRLGRYPR---AQLEVSALLLE 152
+ G ++R G + A + + P +P+ +++ ++L
Sbjct: 73 IP--------GGFKKREGRPGDDATLTARLIDRPIRP-----LFPKGYKHDVQIMNMVLS 119
Query: 153 DGG--SALAAALTAAALALADAGVEMYDLVVGCGLSLAPGPAPTWLLDPTRLEEERAAAG 210
S AA+ +++AL+ + + + G + G ++++PT E+E +
Sbjct: 120 ADPDCSPQMAAMIGSSMALSVSDIPFQGPIAGVNVGYIDG---KYIINPTVEEKEVSRLD 176
Query: 211 LTVALMPVLNQVAGLLGSGEGGLTESWAEAVRLGLEGCQRLYPVLQQ 257
L VA + V + + EA+ G E QRL QQ
Sbjct: 177 LEVA--GHKDAVNMVEAGASEITEQEMLEAIFFGHEEIQRLVDFQQQ 221
>4AIM-A nrPDB
Length = 726
Score = 119 bits (298), Expect = 1e-27, Method: Composition-based stats.
Identities = 45/240 (18%), Positives = 79/240 (32%), Gaps = 12/240 (5%)
Query: 23 DEEEAPGTRDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGPA 82
D RD +RP+ G+L + GSA G T+ + + G
Sbjct: 327 DTGLRIDGRDVKTVRPILGEVGILPRTHGSALFTRGETQAIVVAT--------LGTGDDE 378
Query: 83 GAGGEAPAALRGRLLCDFRRAPFA-GRRRRAPPGGCEERELALALQEALEPAV-RLGRYP 140
+ L + P++ G R G E AL P + +P
Sbjct: 379 QFIDALEGTYKESFLLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRALRPMLPTKEDFP 438
Query: 141 RAQLEVSALLLEDGGSALAAALTAAALALADAGVEMYDLVVGCGLSLAPGPAPTWLL-DP 199
+ + + + E GS+ A + ++LA+ DAGV + V G + L +L D
Sbjct: 439 YT-IRLVSEITESNGSSSMATVCGSSLAMMDAGVPLVRPVSGIAMGLILEQDGFAVLSDI 497
Query: 200 TRLEEERAAAGLTVALMPVLNQVAGLLGSGEGGLTESWAEAVRLGLEGCQRLYPVLQQSL 259
E+ VA + G +A+ EG + + +++
Sbjct: 498 LGDEDHLGDMDFKVAGTSEGLTSLQMDIKIAGITPAIMEQALAQAKEGRAHILGEMNKAM 557
Score = 44.8 bits (104), Expect = 4e-05, Method: Composition-based stats.
Identities = 39/227 (17%), Positives = 71/227 (31%), Gaps = 19/227 (8%)
Query: 48 QAKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGPAGAGGEAPAALRGRLLCDFRRAPFAG 107
QA G+ G T VL + P + + + G
Sbjct: 40 QADGAVLATMGETVVLATA-------VFAKSQKPGQDFFPLTVNYQEKTFAAGKIP--GG 90
Query: 108 RRRRAPPGGCEERELALALQEALEPAVRLGRYPRAQLEVSA--LLLEDGGSALAAALTAA 165
+R +E ++ + + P G Q+ V+ LE+ L + AA
Sbjct: 91 FFKREGRPSEKETLVSRLIDRPIRPLFVKGFKNEVQVVVTVLQHDLENDPDIL--GMVAA 148
Query: 166 ALALADAGVEMYDLVVGCGLSLAPGPAPTWLLDPTRLEEERAAAGLTVALMPVLNQVAGL 225
+ AL +G + + G ++L+PT E + + L VA + V +
Sbjct: 149 SAALCLSGAPFMGPIGAARVGWVDGA---YVLNPTLDEMKESKMDLVVA--GTADAVMMV 203
Query: 226 LGSGEGGLTESWAEAVRLGLEGCQRLYPVLQQSLVRAARRRGAAAQP 272
+ E V + Q + + L A + A +P
Sbjct: 204 ESEIQELSEEIVLGGVNFAHQQMQAVIDAIID-LAEHAAKEPFAFEP 249
>6D6K-A nrPDB
Length = 705
Score = 119 bits (297), Expect = 1e-27, Method: Composition-based stats.
Identities = 45/245 (18%), Positives = 82/245 (33%), Gaps = 16/245 (6%)
Query: 23 DEEEAPGTRDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGPA 82
+ RD +R + + G+L +A GSA G T+ L + A
Sbjct: 321 SGKPRIDGRDTKTVRALDVQVGVLERAHGSALFTRGETQALVTTT--------LGNTRDA 372
Query: 83 GAGGEAPAALRGRLLCDFRRAPFA-GRRRRAPPGGCEERELALALQEALEPAV-RLGRYP 140
+ + ++ G R E + ++ + R+P
Sbjct: 373 LMVDTLAGTKTDNFMLHYNFPAYSVGETGRESGPKRREIGHGRLARRGVQAVLPAADRFP 432
Query: 141 RAQLEVSALLLEDGGSALAAALTAAALALADAGVEMYDLVVGCGLSLA-PGPAPTWLLDP 199
+ + + + E GS+ A++ A+L+L DAGV + V G + L G L D
Sbjct: 433 Y-VIRIVSDITESNGSSSMASVCGASLSLMDAGVPLKAPVAGIAMGLVKEGERFAVLSDI 491
Query: 200 TRLEEERAAAGLTVALMPVLNQVAGL--LGSGEGGLTESWAEAVRLGLEGCQRLYPVLQQ 257
E+ + + N + L EG E A+ G + + +
Sbjct: 492 LGDEDHLG--DMDFKVAGSANGITALQMDIKIEGITEEIMEVALNQAFAGRMHILNEMNK 549
Query: 258 SLVRA 262
+ RA
Sbjct: 550 VISRA 554
Score = 41.8 bits (96), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/206 (15%), Positives = 64/206 (31%), Gaps = 9/206 (4%)
Query: 54 YLEAGGTKVLCAVSGPRQAEGGERGGGPAGAGGEAPAALRGRLLCDFRRAPFAGRRRRAP 113
+ VL + G P + + G +R
Sbjct: 32 RVARQANTVLITMGGVTVLVAVVAAPTAKAGQDFFPLTVNYQEKQYAAGRIPGGYGKREG 91
Query: 114 PGGCEERELALALQEALEPAVRLGRYPRAQLEVSALLLEDGGSALA--AALTAAALALAD 171
E ++ + + P G Y ++V+A ++ + A AA+ + ALA
Sbjct: 92 RASEAETLISRLIDRPIRPLFPEGYYNE--IQVTATVVSSDKTMEADIAAMLGTSAALAI 149
Query: 172 AGVEMYDLVVGCGLSLAPGPAPTWLLDPTRLEEERAAAGLTVALMPVLNQVAGLLGSGEG 231
AG + + L G ++L+P + A + L + + + V + +
Sbjct: 150 AGTPFRGPIGAARVGLINGE---YVLNPNFEQ--MAQSDLDLVVAGTESAVLMVESEAKE 204
Query: 232 GLTESWAEAVRLGLEGCQRLYPVLQQ 257
+ AV G + Q + +
Sbjct: 205 LSEDQMLGAVLFGHDEMQIAIQAINE 230
>3B4T-A nrPDB
Length = 262
Score = 119 bits (297), Expect = 2e-27, Method: Composition-based stats.
Identities = 47/249 (18%), Positives = 82/249 (32%), Gaps = 25/249 (10%)
Query: 25 EEAPGTRDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGPAGA 84
+ R LRPV G GS +E G TKVLC S + G
Sbjct: 5 SKREDGRLDHELRPVIITRGFTENPAGSVLIEFGHTKVLCTASVTEGVPRWRKATGLGWL 64
Query: 85 GGEAPAALRGRLLCDFRRAPFAGRRRRAPPGGCEERELALALQEALEPAVRLGRYPRAQL 144
E + + R +E++ + +L + L +
Sbjct: 65 TAEYA-------MLPSATHSRSDRESVRGRLSGRTQEISRLIGRSLRACIDLAALGENTI 117
Query: 145 EVSALLLEDGGSALAAALTAAALALADAGV------------EMYDLVVGCGLSLAPGPA 192
+ +L+ G AA+T A +ALADA + + + + G
Sbjct: 118 AIDCDVLQADGGTRTAAITGAYVALADAVTYLSAAGKLSDPRPLSCAIAAVSVGVVDG-- 175
Query: 193 PTWLLDPTRLEEERAAAGLTVALMPVLNQVAGLLGSGEGGL--TESWAEAVRLGLEGCQR 250
+D E+ RA + V + + + G+GEG + + + + L C
Sbjct: 176 -RIRVDLPYEEDSRAEVDMNV-VATDTGTLVEIQGTGEGATFARSTLDKLLDMALGACDT 233
Query: 251 LYPVLQQSL 259
L+ + +L
Sbjct: 234 LFAAQRDAL 242
>3H1C-A nrPDB
Length = 549
Score = 117 bits (292), Expect = 5e-27, Method: Composition-based stats.
Identities = 48/239 (20%), Positives = 82/239 (34%), Gaps = 12/239 (5%)
Query: 24 EEEAPGTRDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGPAG 83
E R+ +R + R G+L + GSA G T+ L + G R A
Sbjct: 312 GEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATL-----GTARD---AQ 363
Query: 84 AGGEAPAALRGRLLCDFRRAPFA-GRRRRAPPGGCEERELALALQEALEPAV-RLGRYPR 141
E L + P++ G E + + + + ++P
Sbjct: 364 VLDELMGERTDTFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPDMDKFPY 423
Query: 142 AQLEVSALLLEDGGSALAAALTAAALALADAGVEMYDLVVGCGLSLAPGPAPTWLL-DPT 200
+ V + + E GS+ A++ A+LAL DAGV + V G + L +L D
Sbjct: 424 T-VRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNYVVLSDIL 482
Query: 201 RLEEERAAAGLTVALMPVLNQVAGLLGSGEGGLTESWAEAVRLGLEGCQRLYPVLQQSL 259
E+ VA + EG E A+ + V++Q++
Sbjct: 483 GDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQAI 541
Score = 49.5 bits (116), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/234 (17%), Positives = 85/234 (36%), Gaps = 25/234 (10%)
Query: 39 VYARAGLLSQ-AKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGPAGAGGEAPAALRGRLL 97
V G++++ A + + T V V G ++A+ G+ P + GR+
Sbjct: 16 VTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQ-DFFPLTVNYQERTYAAGRI- 73
Query: 98 CDFRRAPFAGRRRRAPPGGCEERELALALQEALEPAVRLGRYPR---AQLEVSALLLEDG 154
P + RR P E +A + + P +P +++V A ++
Sbjct: 74 ------PGSFFRREGRPSEGETL-IARLIDRPIRP-----LFPEGFVNEVQVIATVVSVN 121
Query: 155 GSALA--AALTAAALALADAGVEMYDLVVGCGLSLAPGPAPTWLLDPTRLEEERAAAGLT 212
A+ A+ AL+ +G+ + + ++L+PT+ E + + L
Sbjct: 122 PQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYIND---QYVLNPTQDELKESKLDLV 178
Query: 213 VALMPVLNQVAGLLGSGEGGLTESWAEAVRLGLEGCQRLYPVLQQSLVRAARRR 266
VA V + + + AV G E Q + + + + A + R
Sbjct: 179 VA--GTEAAVLMVESEAQLLSEDQMLGAVVFGHEQQQVVIQNINELVKEAGKPR 230
>3CDI-A nrPDB
Length = 723
Score = 116 bits (291), Expect = 8e-27, Method: Composition-based stats.
Identities = 48/239 (20%), Positives = 82/239 (34%), Gaps = 12/239 (5%)
Query: 24 EEEAPGTRDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGPAG 83
E R+ +R + R G+L + GSA G T+ L + G R A
Sbjct: 318 GEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATL-----GTARD---AQ 369
Query: 84 AGGEAPAALRGRLLCDFRRAPFA-GRRRRAPPGGCEERELALALQEALEPAV-RLGRYPR 141
E L + P++ G E + + + + ++P
Sbjct: 370 VLDELMGERTDTFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPDMDKFPY 429
Query: 142 AQLEVSALLLEDGGSALAAALTAAALALADAGVEMYDLVVGCGLSLAPGPAPTWLL-DPT 200
+ V + + E GS+ A++ A+LAL DAGV + V G + L +L D
Sbjct: 430 T-VRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNYVVLSDIL 488
Query: 201 RLEEERAAAGLTVALMPVLNQVAGLLGSGEGGLTESWAEAVRLGLEGCQRLYPVLQQSL 259
E+ VA + EG E A+ + V++Q++
Sbjct: 489 GDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQAI 547
Score = 49.1 bits (115), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/234 (17%), Positives = 85/234 (36%), Gaps = 25/234 (10%)
Query: 39 VYARAGLLSQ-AKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGPAGAGGEAPAALRGRLL 97
V G++++ A + + T V V G ++A+ G+ P + GR+
Sbjct: 22 VTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQ-DFFPLTVNYQERTYAAGRI- 79
Query: 98 CDFRRAPFAGRRRRAPPGGCEERELALALQEALEPAVRLGRYPR---AQLEVSALLLEDG 154
P + RR P E +A + + P +P +++V A ++
Sbjct: 80 ------PGSFFRREGRPSEGETL-IARLIDRPIRP-----LFPEGFVNEVQVIATVVSVN 127
Query: 155 GSALA--AALTAAALALADAGVEMYDLVVGCGLSLAPGPAPTWLLDPTRLEEERAAAGLT 212
A+ A+ AL+ +G+ + + ++L+PT+ E + + L
Sbjct: 128 PQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYIND---QYVLNPTQDELKESKLDLV 184
Query: 213 VALMPVLNQVAGLLGSGEGGLTESWAEAVRLGLEGCQRLYPVLQQSLVRAARRR 266
VA V + + + AV G E Q + + + + A + R
Sbjct: 185 VA--GTEAAVLMVESEAQLLSEDQMLGAVVFGHEQQQVVIQNINELVKEAGKPR 236
>1E3H-A nrPDB
Length = 757
Score = 102 bits (254), Expect = 1e-22, Method: Composition-based stats.
Identities = 42/243 (17%), Positives = 80/243 (32%), Gaps = 16/243 (6%)
Query: 24 EEEAPGTRDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGPAG 83
E++ R T +R + A + + GSA E G T++L +
Sbjct: 353 EKKRIDGRGVTDIRTLAAEVEAIPRVHGSALFERGETQILGVTT--------LNMLRMEQ 404
Query: 84 AGGEAPAALRGRLLCDFRRAPFA-GRRRRAPPGGCEERELALALQEALEPAV-RLGRYPR 141
R R + ++ P++ G R E + A+ P + +P
Sbjct: 405 QLDTLSPVTRKRYMHNYNFPPYSVGETGRVGSPKRREIGHGALAERAIVPVLPTREEFPY 464
Query: 142 AQLEVSALLLEDGGSALAAALTAAALALADAGVEMYDLVVGCGLSLA-----PGPAPTWL 196
+ + L GS ++ A+ ++L +AGV + V G + L L
Sbjct: 465 -AIRQVSEALGSNGSTSMGSVCASTMSLLNAGVPLKAPVAGIAMGLISQEINGETHYVAL 523
Query: 197 LDPTRLEEERAAAGLTVALMPVLNQVAGLLGSGEGGLTESWAEAVRLGLEGCQRLYPVLQ 256
D E+ VA L +G A A++ + + V+
Sbjct: 524 TDILGAEDAFGDMDFKVAGTKEFVTALQLDTKLDGIPASVLAAALKQARDARLHILDVMM 583
Query: 257 QSL 259
+++
Sbjct: 584 EAI 586
Score = 38.7 bits (88), Expect = 0.003, Method: Composition-based stats.
Identities = 46/213 (21%), Positives = 77/213 (36%), Gaps = 17/213 (7%)
Query: 37 RPVYARAGLLSQ-AKGSAY-LEAGGTKVLCAVSGPRQAEGGERGGGPAGAGGEAPAALRG 94
R + G L++ A GSA T VL A + + + + P E G
Sbjct: 37 RTIRFETGRLARQAAGSAVAYLDDDTMVLSATTASKNPKD-QLDFFPLTVDVEERMYAAG 95
Query: 95 RLLCDFRRAPFAGRRRRAPPGGCEERELALALQEALEPAVRLGRYPRAQLEVSALLLEDG 154
++ P + RR + + L P+ + G Q+ + + L
Sbjct: 96 KI-------PGSFFRREGR-PSEDAILTCRLIDRPLRPSFKKGLRNEIQVVATIMALNPD 147
Query: 155 GSALAAALTAAALALADAGVEMYDLVVGCGLSLAPGPAPTWLLDPTRLEEERAAAGLTVA 214
A+ AA+ + AG+ + G ++L G W+ PT E E A + VA
Sbjct: 148 HLYDVVAINAASASTQLAGLPFSGPIGGVRVALIRG---QWVAFPTHTELEDAVFDMVVA 204
Query: 215 -LMPVLNQVAGLLGSGEGGLTESWAEAVRLGLE 246
+ VA ++ E TE + V+ G E
Sbjct: 205 GRVLEDGDVAIMMVEAEA--TEKTIQLVKDGAE 235
>3L7Z-A nrPDB
Length = 271
Score = 75.3 bits (183), Expect = 3e-14, Method: Composition-based stats.
Identities = 47/261 (18%), Positives = 86/261 (32%), Gaps = 45/261 (17%)
Query: 27 APGTRDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGPAGAGG 86
R T RP+ +A GSA ++ G T VL
Sbjct: 28 RQDGRKLTDYRPLSITLDYAKKADGSALVKLGTTMVLAGTKLEIDKPYE----------- 76
Query: 87 EAPAALRGRLLCDFRRAPFAGRRRRAPPGGCEERELALALQEALE--PAVRLGRY----P 140
+G L+ + P A P ELA + +L A+ L +
Sbjct: 77 --DTPNQGNLIVNVELLPLAYTTFEPGPPDENAIELARVVDRSLRDSKALDLTKLVIEPG 134
Query: 141 RA--QLEVSALLLEDGGSALAAALTAAALALADAGV-----------------EMYDLVV 181
++ + + +L+ GG+ L A A+ AL + V + VV
Sbjct: 135 KSVWTVWLDVYVLDYGGNVLDACTLASVAALYNTKVYKVEQISVNKNEVVGKLPLNYPVV 194
Query: 182 GCGLSLAPGPAPTWLLDPTRLEEERAAAGLTVALMPVLNQVAGLLGSGEGGLTESWAEAV 241
++ ++DP EE A ++ + P L ++ G+ SG+G ++ + +
Sbjct: 195 TISVAKVDKY---LVVDPDLDEESIMDAKISFSYTPDL-KIVGIQKSGKGSMS---LQDI 247
Query: 242 RLGLEGCQRLYPVLQQSLVRA 262
+ L + L +
Sbjct: 248 DQAENTARSTAVKLLEELKKH 268
>6D6R-C nrPDB
Length = 278
Score = 66.0 bits (159), Expect = 2e-11, Method: Composition-based stats.
Identities = 47/264 (17%), Positives = 84/264 (31%), Gaps = 41/264 (15%)
Query: 24 EEEAPGTRDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGPAG 83
E P R+ R G +S A GSA ++ G T V+C V A
Sbjct: 22 ENCRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVICGVKAEFAAPST-------- 73
Query: 84 AGGEAPAALRGRLLCDFRRAPFAGRRRRAPPGGCEERELALALQEALEPAVRLGR----- 138
A +G ++ + P R R+ P G E + + + + +E + + +
Sbjct: 74 -----DAPDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCI 128
Query: 139 YPRAQLEV-SALL--LEDGGSALAAALTAAALALADAGVE-------------------- 175
P + V L L+ G+ L A A AL + +
Sbjct: 129 SPGKLVWVLYCDLICLDYDGNILDACTFALLAALKNVQLPEVTINEETALAEVNLKKKSY 188
Query: 176 MYDLVVGCGLSLAPGPAPTWLLDPTRLEEERAAAGLTVALMPVLNQVAGLLGSGEGGLTE 235
+ S A ++DPT EE A LT+ + G G
Sbjct: 189 LNIRTHPVATSFAVFDDTLLIVDPTGEEEHLATGTLTIVMDEEGKLCCLHKPGGSGLTGA 248
Query: 236 SWAEAVRLGLEGCQRLYPVLQQSL 259
+ + + + + ++ + +
Sbjct: 249 KLQDCMSRAVTRHKEVKKLMDEVI 272
>2BA1-H nrPDB
Length = 259
Score = 62.6 bits (150), Expect = 2e-10, Method: Composition-based stats.
Identities = 52/255 (20%), Positives = 88/255 (34%), Gaps = 37/255 (14%)
Query: 24 EEEAPGTRDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGPAG 83
+ E R R V ++ +A+GSA ++ G T+V+ V + G P
Sbjct: 20 DNERIDGRGFDEFRKVEIIPNVIEKAEGSALVKLGDTQVVVGV---KMQPGEPYPDTPD- 75
Query: 84 AGGEAPAALRGRLLCDFRRAPFAGRRRRAPPGGCEERELALALQEALE--PAVRLGRY-- 139
RG ++ + P A P ELA + + AV L +
Sbjct: 76 ---------RGVIIVNAELVPLASPTFEPGPPDENSIELARVVDRGIRESEAVDLSKLVI 126
Query: 140 --PRAQLEVSALL--LEDGGSALAAALTAAALALA-------------DAGVEMYDLVVG 182
V + L+D G+ L A+ AA AL D + + DL V
Sbjct: 127 EEGEKVWIVFVDIHALDDDGNLLDASALAAIAALMNTKVPAERFDLGEDYLLPVRDLPVS 186
Query: 183 CGLSLAPGPAPTWLLDPTRLEEERAAAGLTVALMPVLNQVAGLLGSGEGGLTESWAEAVR 242
+ +L+DP+R E LT+ N VA G + + E +
Sbjct: 187 VTSLIV---GNKYLVDPSREEMSVGDTTLTITTDKDDNVVAMQKSGGYLLDEKLFDELLD 243
Query: 243 LGLEGCQRLYPVLQQ 257
+ + ++L ++
Sbjct: 244 VSINCARKLREKFKE 258
>2WNR-A nrPDB
Length = 271
Score = 61.4 bits (147), Expect = 4e-10, Method: Composition-based stats.
Identities = 47/276 (17%), Positives = 97/276 (35%), Gaps = 42/276 (15%)
Query: 11 PEESQPPQLYAADEEEAPGTRDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPR 70
PE ++ + +E R R + G++S+A+GS+ ++ G T+++ V
Sbjct: 9 PEITRKSITDLINNKERIDGRSLHEFRDISIETGVISKAEGSSRVKLGNTQIIVGV---- 64
Query: 71 QAEGGERGGGPAGAGGEAPAALRGRLLC-DFRRAPFAGRRRRAPPGGCEERELALALQEA 129
G P ++ + P A P EL+ +
Sbjct: 65 ----------KPQIGEPFPDTPEMGVILTNSELLPMASPTFEPGPPDERSVELSRVVDRC 114
Query: 130 LEPAVRLGRYPRAQLE--------VSALLLEDGGSALAAALTAAALALADAGVEMYDLVV 181
+ + + +E + +++ G+ AA+ A AL D + ++
Sbjct: 115 IRESRMIDLEKLCIIEGSKVWMLFLDLHIIDYDGNLFDAAVLATVAALLDTRIPAAEVED 174
Query: 182 GCGLSLAPGPAP-----------------TWLLDPTRLEEERAAAGLTVALMPVLNQVAG 224
G + P +LDP+ EE+ A +++ + +
Sbjct: 175 GEVVINREKMQPLPVNRKALMCTFAKIGNEIVLDPSLEEEDILTARISIGV-TEEGSICA 233
Query: 225 LLGSGEGGLT-ESWAEAVRLGLEGCQRLYPVLQQSL 259
+ GEG LT + +AV + +E +L L +S+
Sbjct: 234 MQKGGEGPLTRDDVLKAVSIAVEKVPQLIEYLDKSM 269
>2PO2-B nrPDB
Length = 277
Score = 55.6 bits (132), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/269 (15%), Positives = 84/269 (31%), Gaps = 43/269 (15%)
Query: 24 EEEAPGTRDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGPAG 83
E + R RP+ G++ +A+GSA ++ G T+VL +
Sbjct: 24 EGKRIDDRGFEDYRPIEIEVGVIEKAEGSALVKLGSTQVLVGI--------------KTS 69
Query: 84 AGGEAPAALRGRLL-CDFRRAPFAGRRRRAPPGGCEERELALALQEALE--PAVRLGRY- 139
G P ++ + P A P ELA + + A+ L +
Sbjct: 70 LGEPFPDTPNMGVMTTNVELVPLASPTFEPGPPDERAIELARVIDRGIRESKALNLEKMV 129
Query: 140 --PRAQLEV---SALLLEDGGSALAAALT-------------------AAALALADAGVE 175
P + V +L+ G+ + A + D
Sbjct: 130 IVPGKIVRVVFIDVHVLDHDGNLMDAIGIAAIAALLNARVPKVRYNEETGEVETLDETEP 189
Query: 176 MYDLVVGCGLSLAPGPAPTWLLDPTRLEEERAAAGLTVALMPVLNQVAGLLGSGEGGLTE 235
+ + ++ A ++DP+ EE +T+ + A G E
Sbjct: 190 LPVEKIPVPVTFA-KIGNILVVDPSLDEELVMDGKITITTDETGHISAVQKSEGGAFKLE 248
Query: 236 SWAEAVRLGLEGCQRLYPVLQQSLVRAAR 264
AV + + + ++ +++ +A +
Sbjct: 249 EVMYAVETAFKKAEEIRKLILEAVEKAKQ 277
>6D6Q-E nrPDB
Length = 293
Score = 47.2 bits (110), Expect = 8e-06, Method: Composition-based stats.
Identities = 57/283 (20%), Positives = 88/283 (31%), Gaps = 47/283 (16%)
Query: 12 EESQPPQLYAADEEEAPGTRDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQ 71
E + ++ E+ R R V ++S GSA ++ G T +L V
Sbjct: 10 EAEKVYIVHGVQEDLRVDGRGCEDYRCVEVETDVVSNTSGSARVKLGHTDILVGV----- 64
Query: 72 AEGGERGGGPAGAGGEAPAALRGRLLCDFRRAPFAGRRRRAPPGGCEERELALALQEALE 131
+ G L + C P G E+A L
Sbjct: 65 ----KAEMGTPKLEKPNEGYLEFFVDCSASATP----EFEGRGGDDLGTEIANTLYRIFN 116
Query: 132 --PAVRLGRY---PRAQLE---VSALLLEDGGSALAAALTAAALALADAGVE----MYDL 179
+V L PR V LLLE GG+ A A AL + + + D
Sbjct: 117 NKSSVDLKTLCISPREHCWVLYVDVLLLECGGNLFDAISIAVKAALFNTRIPRVRVLEDE 176
Query: 180 VVGCGLSLAPGPAPTW--------------------LLDPTRLEEERAAAGLTVALMPVL 219
+ L+ P ++D T EE + A L V++
Sbjct: 177 EGSKDIELSDDPYDCIRLSVENVPCIVTLCKIGYRHVVDATLQEEACSLASLLVSVTSK- 235
Query: 220 NQVAGLLGSGEGGLT-ESWAEAVRLGLEGCQRLYPVLQQSLVR 261
V + G+G L ES E + G + L+ LQ + +
Sbjct: 236 GVVTCMRKVGKGSLDPESIFEMMETGKRVGKVLHASLQSVVHK 278
>5K36-E nrPDB
Length = 269
Score = 37.9 bits (86), Expect = 0.005, Method: Composition-based stats.
Identities = 38/258 (14%), Positives = 74/258 (28%), Gaps = 15/258 (5%)
Query: 3 GD-HRRIRGPEESQPPQLYAADEEEAPGTRDPTRLRPVYARAGLLSQAKGSAYLEAGGTK 61
GD H + E+S A+ P R P + RP+ L + GS+ + A
Sbjct: 1 GDPHMSLSVAEKSYLYDSLASTPSIRPDGRLPHQFRPIEIFTDFLPSSNGSSRIIASDGS 60
Query: 62 VLCAVSGPRQAEGGERGGGPAGAGGEAPAALRGRLLCDFRRAPFAGRRRRAPPGGCEERE 121
C VS + + L+ + + + + +
Sbjct: 61 E-CIVSIKSKVVDHHVENELLQVDVDIAGQRDDALVVETITSLLNKVLKSGSGVDSSKLQ 119
Query: 122 LALALQ-EALEPAVRLGRYPRAQLEVSALLLEDGGSALAAALTAAALALADAGVEMYDLV 180
L + + + + +S + S L +A L + +
Sbjct: 120 LTKKYSFKIFVDVLVISSHSHPVSLISFAIYSALNSTYLPKLISAFDDLEVEELPTFHDY 179
Query: 181 VGCGLSLAPG-------PAPTWLLDPTRLEEERAAAGLTVA-----LMPVLNQVAGLLGS 228
L + P LLDP E E A GL ++ + + VA +
Sbjct: 180 DMVKLDINPPLVFILAVVGNNMLLDPAANESEVANNGLIISWSNGKITSPIRSVALNDSN 239
Query: 229 GEGGLTESWAEAVRLGLE 246
+ + + + +
Sbjct: 240 VKSFKPHLLKQGLAMVEK 257
>2NN6-A nrPDB
Length = 358
Score = 34.4 bits (77), Expect = 0.050, Method: Composition-based stats.
Identities = 44/271 (16%), Positives = 78/271 (28%), Gaps = 40/271 (14%)
Query: 23 DEEEAPGTRDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGPA 82
+E++ R R + G G +E G T+VL VS +
Sbjct: 36 EEKKRLDGRQTYDYRNIRISFG---TDYGCCIVELGKTRVLGQVSCELVSP--------- 83
Query: 83 GAGGEAPAALRGRLLCDFRRAPFAGRRRRAPPGGCEERELALALQEA----LEPAVRLGR 138
L L AP R++ R + L+ + E +
Sbjct: 84 KLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLMERCLRNSKCIDTESLCVVAG 143
Query: 139 YPRAQLEVSALLLEDGGSALAAALTAAALALA-----DAGV------------------E 175
Q+ V LL G+ + AA AA +AL D V
Sbjct: 144 EKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQGDEVTLYTPEERDPVPLS 203
Query: 176 MYDLVVGCGLSLAPGPAPTWLLDPTRLEEERAAAGLTVALMPVLNQVAGLLGSGEGGLTE 235
++ + + + L+DP EE L +A+ G L +
Sbjct: 204 IHHMPICVSFAFFQ-QGTYLLVDPNEREERVMDGLLVIAMNKHREICTIQSSGGIMLLKD 262
Query: 236 SWAEAVRLGLEGCQRLYPVLQQSLVRAARRR 266
++ + ++ ++L + R
Sbjct: 263 QVLRCSKIAGVKVAEITELILKALENDQKVR 293
>4M64-A nrPDB
Length = 486
Score = 32.9 bits (73), Expect = 0.14, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 48/117 (41%), Gaps = 3/117 (2%)
Query: 133 AVRLGRYPRAQLEVSALLLEDGGSALAAALTAAALALADAGVEMYDLVVGCGLSLAPGPA 192
+ L +PR +S +L G S + A A+A A + L+V G+ L G A
Sbjct: 280 LLTLIVFPRLVKMLSRRILWAGASVMPVLSCAGLFAMALADIHNAALIVAAGIFLNIGTA 339
Query: 193 PTWLLDPTRLEE--ERAAAGLTVALMPVLNQVAGLLGSGEGGLTESWAEAVRLGLEG 247
W+L + + + L + + V ++ G G ++ A+ LGL G
Sbjct: 340 LFWVLQVIMVADTVDYGEFKLNIRCESIAYSVQTMVVKG-GSAFAAFFIALVLGLIG 395
>5NLM-A nrPDB
Length = 478
Score = 32.9 bits (73), Expect = 0.15, Method: Composition-based stats.
Identities = 51/262 (19%), Positives = 71/262 (27%), Gaps = 36/262 (13%)
Query: 3 GDHRRIRGPEESQPPQLYAADEEEAPGTRDPTRLRPVYARAGLLSQAKGSAYLE-AGGTK 61
G R + PE +P +A RP L Q +GS G
Sbjct: 227 GPIRELLHPEPGKPRVYPVGPLIQAGSCEKGAAARP-ECLKWLDQQPRGSVLFVNFGSGG 285
Query: 62 VLCAVSGPRQAEGGERGGGPAGAGGEAPAALRGRLLCDFRRAPFAGRRRRAPPGGCEERE 121
VL + E G A + +R F+ P E
Sbjct: 286 VLST------EQQNELAGVLAHSQQRFLWVVRPPNDGIANATYFSVDGEIDPLKLLPEGF 339
Query: 122 LALALQEALEPAVRLGRYPRAQLEVSALLLEDGGSALAAALTAAALALADAGVEMYDLVV 181
L L P ++ L E G L + L GV +
Sbjct: 340 LEQTAGRGL-------VLPMWAPQIDVLSHESTGGFLTHCGWNSTLESVFHGVPL----- 387
Query: 182 GCGLSLAPGPAPTWLLDPTRLEEERAAAGLTVALMPVLNQVAGLLGSGEGGLTESWAEAV 241
+ P E++ A LT L L G G G +
Sbjct: 388 --------------ITWPLYAEQKMNAVMLTEGLRVGLRPSVGKDGIIRGAEIARVIGEL 433
Query: 242 RLGLEGCQRLYPVLQQSLVRAA 263
G EG +R+ +Q+ L RAA
Sbjct: 434 MEGEEG-KRIRSKMQE-LKRAA 453
>6H25-A nrPDB
Length = 443
Score = 32.5 bits (72), Expect = 0.18, Method: Composition-based stats.
Identities = 44/271 (16%), Positives = 78/271 (28%), Gaps = 40/271 (14%)
Query: 23 DEEEAPGTRDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGPA 82
+E++ R R + G G +E G T+VL VS +
Sbjct: 23 EEKKRLDGRQTYDYRNIRISFG---TDYGCCIVELGKTRVLGQVSCELVSP--------- 70
Query: 83 GAGGEAPAALRGRLLCDFRRAPFAGRRRRAPPGGCEERELALALQEA----LEPAVRLGR 138
L L AP R++ R + L+ + E +
Sbjct: 71 KLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLMERCLRNSKCIDTESLCVVAG 130
Query: 139 YPRAQLEVSALLLEDGGSALAAALTAAALALA-----DAGV------------------E 175
Q+ V LL G+ + AA AA +AL D V
Sbjct: 131 EKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQGDEVTLYTPEERDPVPLS 190
Query: 176 MYDLVVGCGLSLAPGPAPTWLLDPTRLEEERAAAGLTVALMPVLNQVAGLLGSGEGGLTE 235
++ + + + L+DP EE L +A+ G L +
Sbjct: 191 IHHMPICVSFAFFQ-QGTYLLVDPNEREERVMDGLLVIAMNKHREICTIQSSGGIMLLKD 249
Query: 236 SWAEAVRLGLEGCQRLYPVLQQSLVRAARRR 266
++ + ++ ++L + R
Sbjct: 250 QVLRCSKIAGVKVAEITELILKALENDQKVR 280
>1JW1-A nrPDB
Length = 689
Score = 31.4 bits (69), Expect = 0.40, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 41/156 (26%), Gaps = 20/156 (12%)
Query: 8 IRGPEESQPPQLYAADEEEAPGTRDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVS 67
IR + D RDP +LRPV A ++ + Y AV+
Sbjct: 46 IRAIAGKNADAVTLDDGMVFEAGRDPYKLRPVAAEIYGTEKSPQTHYY---------AVA 96
Query: 68 GPRQAEGGERGGGPAGAG--GEAPAALRGRLLCDFRRAPFAGRRRRAPPGGCEERELALA 125
++ + + + R P + P G +A
Sbjct: 97 VVKKGSNFKLDQLQGQKSCHMGLGRSAGWNIPVGILRPPLSWTESAEPLQGA----VARF 152
Query: 126 LQEALEPAVRLGRYPRAQLEVSALLLEDGGSALAAA 161
+ P V YP L + G A
Sbjct: 153 FSASCVPCVDGKAYPN-----LCQLCKGVGENKCAC 183
>6NCL-b6 nrPDB
Length = 576
Score = 29.4 bits (64), Expect = 1.5, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 36/134 (26%), Gaps = 17/134 (12%)
Query: 11 PEESQPPQLYAADEEEAPGTRDPTRLRPVYARAGLLSQAKGSAYLEA------------- 57
P E+ P A + R LRP +++A SA
Sbjct: 271 PPEATPNGAILASTQYGKQPRGYAGLRPYEKNYEGIAEADVSALQARYLDQTRGRPRTGD 330
Query: 58 GGTKVLCAVSGPRQAEGGERGGGPAGAGGEAPAALRGRLLCDFRRAPFAGRRRRAPPGGC 117
G T+ + +G R G E+ L R + P +
Sbjct: 331 GDTEPIINPNGERDGTGSYVTENMCSMTLESQRGLVNR----YITPPGVTGVVQQGGEMR 386
Query: 118 EERELALALQEALE 131
E ++E E
Sbjct: 387 PEFVPETTIREQYE 400
>2W78-A nrPDB
Length = 772
Score = 29.1 bits (63), Expect = 2.1, Method: Composition-based stats.
Identities = 8/45 (17%), Positives = 12/45 (26%)
Query: 41 ARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGPAGAG 85
+ QA GSA E G + + P +
Sbjct: 3 VEFDIPPQALGSALQEFGRQADIQVLYRPEEVRNKRSSAIKGKLE 47
>5GIV-A nrPDB
Length = 503
Score = 29.1 bits (63), Expect = 2.3, Method: Composition-based stats.
Identities = 29/174 (16%), Positives = 47/174 (27%), Gaps = 13/174 (7%)
Query: 22 ADEEEAPGTRDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGP 81
P R R AG L A+ + +AG K+L A S +
Sbjct: 33 DQSTFLPAGAAEDRARQQSLLAG-LRHARAT---DAGYGKLLDAASSRSDLSPEQARMVQ 88
Query: 82 AGAGG-EAPAALRGRLLCDFRR---APFAGRRRRAPPGGCEERE--LALALQEALEPAVR 135
E + + +F ++ P L L +L+ A
Sbjct: 89 VARQDFEKATRIPAEFVREFSGHVGQSYSAWTEARPANDFGRMVPYLEKTLDLSLQAA-- 146
Query: 136 LGRYPRAQLEVSALLLEDGGSALAAALTAAALALADAGVEMYDLVVGCGLSLAP 189
+P + + E A + L A V + D V+ G
Sbjct: 147 -SYFPEFGDPLDYYINESDEGMTAEQVGQVFAELRAALVPLADAVIAAGAPRTD 199
>4AMG-A nrPDB
Length = 400
Score = 27.9 bits (60), Expect = 4.5, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 40/121 (33%), Gaps = 23/121 (19%)
Query: 148 ALLLEDGGSALAAALTAAALALADAGVEMYDLVVGCGLSLAPGPAPTWLLDPTRLEEERA 207
A L G + A A+A+AG+ D+ G + P T + DP E
Sbjct: 43 AQALRALGHEVRYATGGDIRAVAEAGLCAVDVSPGVNYAKLFVPDDTDVTDPMHSE---- 98
Query: 208 AAGLTVALMPVLNQVAGLLGSGEGGLTESWAEAVRLGLEGCQRLYPVLQQSLVRAARRRG 267
G GEG E +A + ++G R + LV +G
Sbjct: 99 -------------------GLGEGFFAEMFARVSAVAVDGALRTARSWRPDLVVHTPTQG 139
Query: 268 A 268
A
Sbjct: 140 A 140
Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
Posted date: Jan 3, 2023 9:05 PM
Number of letters in database: 10,336,785
Number of sequences in database: 36,641
Lambda K H
0.306 0.118 0.276
Lambda K H
0.267 0.0364 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,348,699
Number of Sequences: 36641
Number of extensions: 310199
Number of successful extensions: 1429
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 1001
Number of HSP's gapped (non-prelim): 238
length of query: 272
length of database: 10,336,785
effective HSP length: 96
effective length of query: 176
effective length of database: 6,819,249
effective search space: 1200187824
effective search space used: 1200187824
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.2 bits)
S2: 58 (27.1 bits)