BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= Q5QF96
         (384 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

4EZC-A nrPDB                                                          775   0.0  
6QD5-A nrPDB                                                          614   e-176
3K3G-A nrPDB                                                          168   3e-42
5Y0R-A nrPDB                                                           30   1.5  
5C18-A nrPDB                                                           29   3.3  
3MVK-A nrPDB                                                           29   3.6  
6MCK-A nrPDB                                                           29   3.7  
2DQF-B nrPDB                                                           29   4.4  
1RKV-A nrPDB                                                           28   8.2  

>4EZC-A nrPDB
          Length = 384

 Score =  775 bits (2002), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/384 (100%), Positives = 384/384 (100%)

Query: 1   MDDNPTAVKLDQGGNQAPQGRGRRCLPKALGYITGDMKEFANWLKDKPQALQFVDWVLRG 60
           MDDNPTAVKLDQGGNQAPQGRGRRCLPKALGYITGDMKEFANWLKDKPQALQFVDWVLRG
Sbjct: 1   MDDNPTAVKLDQGGNQAPQGRGRRCLPKALGYITGDMKEFANWLKDKPQALQFVDWVLRG 60

Query: 61  ISQVVFVSNPISGILILVGLLVQNPWCALNGCVGTVVSTLTALLLSQDRSAITAGLQGYN 120
           ISQVVFVSNPISGILILVGLLVQNPWCALNGCVGTVVSTLTALLLSQDRSAITAGLQGYN
Sbjct: 61  ISQVVFVSNPISGILILVGLLVQNPWCALNGCVGTVVSTLTALLLSQDRSAITAGLQGYN 120

Query: 121 ATLVGILMAIYSDKGNYFWWLLFPVSAMSMTCPVFSSALNSVLSKWDLPVFTLPFNMALS 180
           ATLVGILMAIYSDKGNYFWWLLFPVSAMSMTCPVFSSALNSVLSKWDLPVFTLPFNMALS
Sbjct: 121 ATLVGILMAIYSDKGNYFWWLLFPVSAMSMTCPVFSSALNSVLSKWDLPVFTLPFNMALS 180

Query: 181 MYLSATGHYNPFFPSTLITPVTSVPNVTWPDLSALQLLKSLPVGVGQIYGCDNPWTGGIF 240
           MYLSATGHYNPFFPSTLITPVTSVPNVTWPDLSALQLLKSLPVGVGQIYGCDNPWTGGIF
Sbjct: 181 MYLSATGHYNPFFPSTLITPVTSVPNVTWPDLSALQLLKSLPVGVGQIYGCDNPWTGGIF 240

Query: 241 LGAILLSSPLMCLHAAIGSLLGIIAGLSLSAPFEDIYAGLWGFNSSLACIAIGGTFMALT 300
           LGAILLSSPLMCLHAAIGSLLGIIAGLSLSAPFEDIYAGLWGFNSSLACIAIGGTFMALT
Sbjct: 241 LGAILLSSPLMCLHAAIGSLLGIIAGLSLSAPFEDIYAGLWGFNSSLACIAIGGTFMALT 300

Query: 301 WQTHLLALACALFTAYLGASMSHVMAVVGLPSGTWPFCLATLLFLLLTTKNPNIYKMPIS 360
           WQTHLLALACALFTAYLGASMSHVMAVVGLPSGTWPFCLATLLFLLLTTKNPNIYKMPIS
Sbjct: 301 WQTHLLALACALFTAYLGASMSHVMAVVGLPSGTWPFCLATLLFLLLTTKNPNIYKMPIS 360

Query: 361 KVTYPEENRIFYLQSRKRTVQGPL 384
           KVTYPEENRIFYLQSRKRTVQGPL
Sbjct: 361 KVTYPEENRIFYLQSRKRTVQGPL 384


>6QD5-A nrPDB
          Length = 367

 Score =  614 bits (1583), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 297/359 (82%), Positives = 328/359 (91%)

Query: 26  LPKALGYITGDMKEFANWLKDKPQALQFVDWVLRGISQVVFVSNPISGILILVGLLVQNP 85
            PKALGY+TGDMKE AN LKDKP  LQF+DW+LRGISQVVFV+NP+SGILILVGLLVQNP
Sbjct: 2   FPKALGYVTGDMKELANQLKDKPVVLQFIDWILRGISQVVFVNNPVSGILILVGLLVQNP 61

Query: 86  WCALNGCVGTVVSTLTALLLSQDRSAITAGLQGYNATLVGILMAIYSDKGNYFWWLLFPV 145
           W AL G +GTVVSTL ALLLSQDRS I +GL GYNATLVG+LMA++SDKG+YFWWLL PV
Sbjct: 62  WWALTGWLGTVVSTLMALLLSQDRSLIASGLYGYNATLVGVLMAVFSDKGDYFWWLLLPV 121

Query: 146 SAMSMTCPVFSSALNSVLSKWDLPVFTLPFNMALSMYLSATGHYNPFFPSTLITPVTSVP 205
            AMSMTCP+FSSALNSVLSKWDLPVFTLPFNMALSMYLSATGHYNPFFP+ L+ P+T+ P
Sbjct: 122 CAMSMTCPIFSSALNSVLSKWDLPVFTLPFNMALSMYLSATGHYNPFFPAKLVIPITTAP 181

Query: 206 NVTWPDLSALQLLKSLPVGVGQIYGCDNPWTGGIFLGAILLSSPLMCLHAAIGSLLGIIA 265
            ++W DLSAL+LLKS+PVGVGQIYGCDNPWTGGIFLGAILLSSPLMCLHAAIGSLLGI A
Sbjct: 182 QISWSDLSALELLKSIPVGVGQIYGCDNPWTGGIFLGAILLSSPLMCLHAAIGSLLGIAA 241

Query: 266 GLSLSAPFEDIYAGLWGFNSSLACIAIGGTFMALTWQTHLLALACALFTAYLGASMSHVM 325
           GLSLSAPFE+IY GLWGFNSSLACIA+GG FMALTWQTHLLAL CALFTAYLG  M++ M
Sbjct: 242 GLSLSAPFENIYFGLWGFNSSLACIAMGGMFMALTWQTHLLALGCALFTAYLGVGMANFM 301

Query: 326 AVVGLPSGTWPFCLATLLFLLLTTKNPNIYKMPISKVTYPEENRIFYLQSRKRTVQGPL 384
           A VGLP+ TWPFCLATLLFL++TTKN NIYKMP+SKVTYPEENRIFYLQ++KR V+ PL
Sbjct: 302 AEVGLPACTWPFCLATLLFLIMTTKNSNIYKMPLSKVTYPEENRIFYLQAKKRMVESPL 360


>3K3G-A nrPDB
          Length = 340

 Score =  168 bits (426), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 117/344 (34%), Positives = 180/344 (52%), Gaps = 11/344 (3%)

Query: 38  KEFANWLKDKPQALQFVDWVLRGISQVVFVSNPISGILILVGLLVQNPWCALNGCVGTVV 97
           + F   L   P  ++F D V RG  QV+F +N ++G+L   G+   +    +   +GT  
Sbjct: 3   RAFGEQLLKNPL-IEFCDSVCRGCGQVMFQNNTVTGLLFFAGIFYNSTTLGVCAVLGTAA 61

Query: 98  STLTALLLSQDRSAITAGLQGYNATLVGILMAIYSDKGNYFWWLLFPVSAMSMTCPVFSS 157
           STLTA LL  D+  + AGL G+N TL GI +  +    NY   +L  V+       +  +
Sbjct: 62  STLTAQLLGVDKPLVRAGLFGFNGTLAGIALPFFF---NYEPAMLGYVALNGAFTTIIMA 118

Query: 158 ALNSVLSKWDLPVFTLPFNMALSMYLSATGHYNPFFPSTLITPVTSVPNVT----WPDLS 213
           +L + L KW +P  T PF +A  + +      + F P  LI P  ++P+V        ++
Sbjct: 119 SLLNFLGKWGVPALTAPFVLATWLLMFGVYKLSLFHPGALIAP--ALPSVAGLADMGTVT 176

Query: 214 ALQLLKSLPVGVGQIYGCDNPWTGGIFLGAILLSSPLMCLHAAIGSLLGIIAGLSLSAPF 273
               ++ L  GVG++   DN  TG IF+ AIL++S +  L A IGSL+G+   L + +P 
Sbjct: 177 GRTFMEGLFKGVGEVMFQDNIVTGVIFVVAILVNSRISALFAVIGSLVGLCTALIMHSPE 236

Query: 274 EDIYAGLWGFNSSLACIAIGGTFMALTWQTHLLALACALFTAYLGASMSHVMAVVGLPSG 333
             +  GL+GFNS L  IA+GG F  L  +T L AL C +  A    + S +++ +G+P+ 
Sbjct: 237 TPVRLGLYGFNSVLCGIAMGGIFFYLNIRTFLYALGCMVLGAIATGAFSVLLSPIGMPAL 296

Query: 334 TWPFCLATLLFLLLTTKNPNIYKMPISKVTYPEEN-RIFYLQSR 376
           TWPF + T LFL   +   NI ++P  K   PE+N R   + SR
Sbjct: 297 TWPFIVVTWLFLFAGSMFRNIAQVPTEKAGTPEDNLRSLAIGSR 340


>5Y0R-A nrPDB
          Length = 425

 Score = 30.0 bits (66), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 2/65 (3%)

Query: 131 YSDKGNYFWWLLFPVSAMSMTCPVFSSALNSVLSKWDLPVFTLPFNMALSMYLSATGHYN 190
           +++KG     L+   + + +   +  S    VL K DLPV    F   + + + AT  Y+
Sbjct: 342 FTEKGREILSLMRKKAKLPIVTNM--SLYRKVLEKTDLPVDKQLFLEQIDLDVKATNFYS 399

Query: 191 PFFPS 195
            FFPS
Sbjct: 400 MFFPS 404


>5C18-A nrPDB
          Length = 785

 Score = 29.3 bits (64), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 12/27 (44%), Positives = 15/27 (55%)

Query: 194 PSTLITPVTSVPNVTWPDLSALQLLKS 220
           PS L   V  VP VTW D+  L+ +K 
Sbjct: 460 PSALRETVVEVPQVTWEDIGGLEDVKR 486


>3MVK-A nrPDB
          Length = 148

 Score = 28.9 bits (63), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 27/57 (47%)

Query: 237 GGIFLGAILLSSPLMCLHAAIGSLLGIIAGLSLSAPFEDIYAGLWGFNSSLACIAIG 293
           GG  L AIL   PL        +L+  + G +++ P  D+YAGL   +      AIG
Sbjct: 52  GGEILKAILTVFPLDTYVDKPATLMEKVPGDTVATPIWDVYAGLIKEHDERGADAIG 108


>6MCK-A nrPDB
          Length = 606

 Score = 28.9 bits (63), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 12/27 (44%), Positives = 15/27 (55%)

Query: 194 PSTLITPVTSVPNVTWPDLSALQLLKS 220
           PS L   V  VP VTW D+  L+ +K 
Sbjct: 253 PSALRETVVEVPQVTWEDIGGLEDVKR 279


>2DQF-B nrPDB
          Length = 114

 Score = 28.9 bits (63), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 6/78 (7%)

Query: 141 LLFPVSAMSMTCPVFSSALNSVLSKWDLPVFTLPFNMALSM-YLSATG--HYNPFFPSTL 197
           L+ P   +S+TC V   ++ S    W   +   P N    M Y+SA+G  +YNP   S +
Sbjct: 11  LVKPSQTLSLTCSVTGDSITSDAWSW---IRKFPGNRLEYMGYVSASGSTYYNPSLKSRI 67

Query: 198 ITPVTSVPNVTWPDLSAL 215
                +  N  + DL+++
Sbjct: 68  SITRDTSKNQYYLDLNSV 85


>1RKV-A nrPDB
          Length = 206

 Score = 27.7 bits (60), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)

Query: 31 GYITGDMKEFANWLKDKPQALQFVDWVLRGISQVVFVSN 69
          G   GD++E    LK    A++FVDW LR   QVV +S+
Sbjct: 55 GLKLGDIQEVIATLKPLEGAVEFVDW-LRERFQVVILSD 92


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

4EZC-A nrPDB                                                          607   e-174
6QD5-A nrPDB                                                          550   e-157
3K3G-A nrPDB                                                          432   e-121

Sequences not found previously or not previously below threshold:

2G2R-H nrPDB                                                           30   1.9  
5OA3-0 nrPDB                                                           29   3.5  
5KKY-A nrPDB                                                           28   8.1  
2YNM-D nrPDB                                                           28   9.8  


CONVERGED!
>4EZC-A nrPDB
          Length = 384

 Score =  607 bits (1565), Expect = e-174,   Method: Composition-based stats.
 Identities = 384/384 (100%), Positives = 384/384 (100%)

Query: 1   MDDNPTAVKLDQGGNQAPQGRGRRCLPKALGYITGDMKEFANWLKDKPQALQFVDWVLRG 60
           MDDNPTAVKLDQGGNQAPQGRGRRCLPKALGYITGDMKEFANWLKDKPQALQFVDWVLRG
Sbjct: 1   MDDNPTAVKLDQGGNQAPQGRGRRCLPKALGYITGDMKEFANWLKDKPQALQFVDWVLRG 60

Query: 61  ISQVVFVSNPISGILILVGLLVQNPWCALNGCVGTVVSTLTALLLSQDRSAITAGLQGYN 120
           ISQVVFVSNPISGILILVGLLVQNPWCALNGCVGTVVSTLTALLLSQDRSAITAGLQGYN
Sbjct: 61  ISQVVFVSNPISGILILVGLLVQNPWCALNGCVGTVVSTLTALLLSQDRSAITAGLQGYN 120

Query: 121 ATLVGILMAIYSDKGNYFWWLLFPVSAMSMTCPVFSSALNSVLSKWDLPVFTLPFNMALS 180
           ATLVGILMAIYSDKGNYFWWLLFPVSAMSMTCPVFSSALNSVLSKWDLPVFTLPFNMALS
Sbjct: 121 ATLVGILMAIYSDKGNYFWWLLFPVSAMSMTCPVFSSALNSVLSKWDLPVFTLPFNMALS 180

Query: 181 MYLSATGHYNPFFPSTLITPVTSVPNVTWPDLSALQLLKSLPVGVGQIYGCDNPWTGGIF 240
           MYLSATGHYNPFFPSTLITPVTSVPNVTWPDLSALQLLKSLPVGVGQIYGCDNPWTGGIF
Sbjct: 181 MYLSATGHYNPFFPSTLITPVTSVPNVTWPDLSALQLLKSLPVGVGQIYGCDNPWTGGIF 240

Query: 241 LGAILLSSPLMCLHAAIGSLLGIIAGLSLSAPFEDIYAGLWGFNSSLACIAIGGTFMALT 300
           LGAILLSSPLMCLHAAIGSLLGIIAGLSLSAPFEDIYAGLWGFNSSLACIAIGGTFMALT
Sbjct: 241 LGAILLSSPLMCLHAAIGSLLGIIAGLSLSAPFEDIYAGLWGFNSSLACIAIGGTFMALT 300

Query: 301 WQTHLLALACALFTAYLGASMSHVMAVVGLPSGTWPFCLATLLFLLLTTKNPNIYKMPIS 360
           WQTHLLALACALFTAYLGASMSHVMAVVGLPSGTWPFCLATLLFLLLTTKNPNIYKMPIS
Sbjct: 301 WQTHLLALACALFTAYLGASMSHVMAVVGLPSGTWPFCLATLLFLLLTTKNPNIYKMPIS 360

Query: 361 KVTYPEENRIFYLQSRKRTVQGPL 384
           KVTYPEENRIFYLQSRKRTVQGPL
Sbjct: 361 KVTYPEENRIFYLQSRKRTVQGPL 384


>6QD5-A nrPDB
          Length = 367

 Score =  550 bits (1418), Expect = e-157,   Method: Composition-based stats.
 Identities = 297/359 (82%), Positives = 328/359 (91%)

Query: 26  LPKALGYITGDMKEFANWLKDKPQALQFVDWVLRGISQVVFVSNPISGILILVGLLVQNP 85
            PKALGY+TGDMKE AN LKDKP  LQF+DW+LRGISQVVFV+NP+SGILILVGLLVQNP
Sbjct: 2   FPKALGYVTGDMKELANQLKDKPVVLQFIDWILRGISQVVFVNNPVSGILILVGLLVQNP 61

Query: 86  WCALNGCVGTVVSTLTALLLSQDRSAITAGLQGYNATLVGILMAIYSDKGNYFWWLLFPV 145
           W AL G +GTVVSTL ALLLSQDRS I +GL GYNATLVG+LMA++SDKG+YFWWLL PV
Sbjct: 62  WWALTGWLGTVVSTLMALLLSQDRSLIASGLYGYNATLVGVLMAVFSDKGDYFWWLLLPV 121

Query: 146 SAMSMTCPVFSSALNSVLSKWDLPVFTLPFNMALSMYLSATGHYNPFFPSTLITPVTSVP 205
            AMSMTCP+FSSALNSVLSKWDLPVFTLPFNMALSMYLSATGHYNPFFP+ L+ P+T+ P
Sbjct: 122 CAMSMTCPIFSSALNSVLSKWDLPVFTLPFNMALSMYLSATGHYNPFFPAKLVIPITTAP 181

Query: 206 NVTWPDLSALQLLKSLPVGVGQIYGCDNPWTGGIFLGAILLSSPLMCLHAAIGSLLGIIA 265
            ++W DLSAL+LLKS+PVGVGQIYGCDNPWTGGIFLGAILLSSPLMCLHAAIGSLLGI A
Sbjct: 182 QISWSDLSALELLKSIPVGVGQIYGCDNPWTGGIFLGAILLSSPLMCLHAAIGSLLGIAA 241

Query: 266 GLSLSAPFEDIYAGLWGFNSSLACIAIGGTFMALTWQTHLLALACALFTAYLGASMSHVM 325
           GLSLSAPFE+IY GLWGFNSSLACIA+GG FMALTWQTHLLAL CALFTAYLG  M++ M
Sbjct: 242 GLSLSAPFENIYFGLWGFNSSLACIAMGGMFMALTWQTHLLALGCALFTAYLGVGMANFM 301

Query: 326 AVVGLPSGTWPFCLATLLFLLLTTKNPNIYKMPISKVTYPEENRIFYLQSRKRTVQGPL 384
           A VGLP+ TWPFCLATLLFL++TTKN NIYKMP+SKVTYPEENRIFYLQ++KR V+ PL
Sbjct: 302 AEVGLPACTWPFCLATLLFLIMTTKNSNIYKMPLSKVTYPEENRIFYLQAKKRMVESPL 360


>3K3G-A nrPDB
          Length = 340

 Score =  432 bits (1110), Expect = e-121,   Method: Composition-based stats.
 Identities = 117/344 (34%), Positives = 180/344 (52%), Gaps = 11/344 (3%)

Query: 38  KEFANWLKDKPQALQFVDWVLRGISQVVFVSNPISGILILVGLLVQNPWCALNGCVGTVV 97
           + F   L   P  ++F D V RG  QV+F +N ++G+L   G+   +    +   +GT  
Sbjct: 3   RAFGEQLLKNPL-IEFCDSVCRGCGQVMFQNNTVTGLLFFAGIFYNSTTLGVCAVLGTAA 61

Query: 98  STLTALLLSQDRSAITAGLQGYNATLVGILMAIYSDKGNYFWWLLFPVSAMSMTCPVFSS 157
           STLTA LL  D+  + AGL G+N TL GI +  +    NY   +L  V+       +  +
Sbjct: 62  STLTAQLLGVDKPLVRAGLFGFNGTLAGIALPFFF---NYEPAMLGYVALNGAFTTIIMA 118

Query: 158 ALNSVLSKWDLPVFTLPFNMALSMYLSATGHYNPFFPSTLITPVTSVPNVT----WPDLS 213
           +L + L KW +P  T PF +A  + +      + F P  LI P  ++P+V        ++
Sbjct: 119 SLLNFLGKWGVPALTAPFVLATWLLMFGVYKLSLFHPGALIAP--ALPSVAGLADMGTVT 176

Query: 214 ALQLLKSLPVGVGQIYGCDNPWTGGIFLGAILLSSPLMCLHAAIGSLLGIIAGLSLSAPF 273
               ++ L  GVG++   DN  TG IF+ AIL++S +  L A IGSL+G+   L + +P 
Sbjct: 177 GRTFMEGLFKGVGEVMFQDNIVTGVIFVVAILVNSRISALFAVIGSLVGLCTALIMHSPE 236

Query: 274 EDIYAGLWGFNSSLACIAIGGTFMALTWQTHLLALACALFTAYLGASMSHVMAVVGLPSG 333
             +  GL+GFNS L  IA+GG F  L  +T L AL C +  A    + S +++ +G+P+ 
Sbjct: 237 TPVRLGLYGFNSVLCGIAMGGIFFYLNIRTFLYALGCMVLGAIATGAFSVLLSPIGMPAL 296

Query: 334 TWPFCLATLLFLLLTTKNPNIYKMPISKVTYPEEN-RIFYLQSR 376
           TWPF + T LFL   +   NI ++P  K   PE+N R   + SR
Sbjct: 297 TWPFIVVTWLFLFAGSMFRNIAQVPTEKAGTPEDNLRSLAIGSR 340


>2G2R-H nrPDB
          Length = 219

 Score = 30.0 bits (66), Expect = 1.9,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 7/85 (8%)

Query: 258 GSLLGIIAGLSLSA---PFEDIYAGLWGFNSSLACIAIGGTF---MALTWQTHLLALACA 311
           G+L+ +    + +    P   +  G  G + +L C+ + G F   + LTW +  L+    
Sbjct: 111 GTLVTVSTAKTTAPSVYPLAPVCGGTTGSSVTLGCL-VKGYFPEPVTLTWNSGSLSSGVH 169

Query: 312 LFTAYLGASMSHVMAVVGLPSGTWP 336
            F A L + +  + + V + S TWP
Sbjct: 170 TFPALLQSGLYTLSSSVTVTSNTWP 194


>5OA3-0 nrPDB
          Length = 584

 Score = 29.2 bits (64), Expect = 3.5,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 2/67 (2%)

Query: 161 SVLSKWDLPVFTLPFNMALSMYLSATGHYNPFFPSTLITPVTSVPNVTWPDLSALQLL-K 219
           +V + W  P     F     +     G  +   P  L+ P   +P V   DL A+ L+  
Sbjct: 82  TVYTLWSYPDLLPTFTTWPLVLEKLVGGADLMLPG-LVMPPAGLPQVQKGDLCAISLVGN 140

Query: 220 SLPVGVG 226
             PV +G
Sbjct: 141 RAPVAIG 147


>5KKY-A nrPDB
          Length = 496

 Score = 27.7 bits (60), Expect = 8.1,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 31/97 (31%), Gaps = 17/97 (17%)

Query: 129 AIYSDKGNYFWW--LLFPVSAMSMTCPVFSSALNSVL---------SKWDLPVFTLPFNM 177
             YSDKG+ +    LL  +   +     F  A +S L           W  P    P   
Sbjct: 204 PAYSDKGDLYKGDQLLGNIYFTTNKTSPFRIAKDSYLWMSYSDDDGKTWSAPQDITPMVK 263

Query: 178 ALSMYLSATGH------YNPFFPSTLITPVTSVPNVT 208
           A  M     G        N      ++ PV +  NV+
Sbjct: 264 ADWMKFLGVGPGTGIVLRNGPHKGRILIPVYTTNNVS 300


>2YNM-D nrPDB
          Length = 530

 Score = 27.7 bits (60), Expect = 9.8,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 1/71 (1%)

Query: 96  VVSTLTALLLSQDRSAITAGLQGYNATLVGILMAIYSDKGNYFWWLLFPVSAMSMTCPVF 155
           V  + TA L+ QD+    A   G N  +V + +  YS K N+     F      +   + 
Sbjct: 91  VGESCTAELI-QDQPGSLAKGMGLNIPIVSLELPAYSKKENWGASETFYQLIRGLLKEIS 149

Query: 156 SSALNSVLSKW 166
             + N+    W
Sbjct: 150 EDSSNNAKQSW 160


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.319    0.139    0.413 

Lambda     K      H
   0.267   0.0426    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,706,290
Number of Sequences: 36641
Number of extensions: 650401
Number of successful extensions: 1958
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 1914
Number of HSP's gapped (non-prelim): 51
length of query: 384
length of database: 10,336,785
effective HSP length: 99
effective length of query: 285
effective length of database: 6,709,326
effective search space: 1912157910
effective search space used: 1912157910
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.3 bits)
S2: 60 (27.7 bits)