BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q5AU62 (352 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 2VUU-A nrPDB 726 0.0 2EXX-A nrPDB 65 6e-11 5F5N-A nrPDB 57 2e-08 5H1Z-A nrPDB 30 2.3 2O3G-A nrPDB 29 3.2 2KGL-A nrPDB 29 3.9 5XF9-D nrPDB 28 6.7 >2VUU-A nrPDB Length = 352 Score = 726 bits (1874), Expect = 0.0, Method: Compositional matrix adjust. Identities = 352/352 (100%), Positives = 352/352 (100%) Query: 1 MAQQKKTIAVVNATGRQAASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPL 60 MAQQKKTIAVVNATGRQAASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPL Sbjct: 1 MAQQKKTIAVVNATGRQAASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPL 60 Query: 61 LNNVPLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYG 120 LNNVPLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYG Sbjct: 61 LNNVPLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYG 120 Query: 121 PWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAP 180 PWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAP Sbjct: 121 PWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAP 180 Query: 181 FDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFETLSPVQVCAAFSRALNRRV 240 FDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFETLSPVQVCAAFSRALNRRV Sbjct: 181 FDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFETLSPVQVCAAFSRALNRRV 240 Query: 241 TYVQVPKVEIKVNIPVGYREQLEAIEVVFGEHKAPYFPLPEFSRPAAGSPKGLGPANGKG 300 TYVQVPKVEIKVNIPVGYREQLEAIEVVFGEHKAPYFPLPEFSRPAAGSPKGLGPANGKG Sbjct: 241 TYVQVPKVEIKVNIPVGYREQLEAIEVVFGEHKAPYFPLPEFSRPAAGSPKGLGPANGKG 300 Query: 301 AGAGMMQGPGGVISQRVTDEARKLWSGWRDMEEYAREVFPIEEEANGLDWML 352 AGAGMMQGPGGVISQRVTDEARKLWSGWRDMEEYAREVFPIEEEANGLDWML Sbjct: 301 AGAGMMQGPGGVISQRVTDEARKLWSGWRDMEEYAREVFPIEEEANGLDWML 352 >2EXX-A nrPDB Length = 306 Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 64/221 (28%), Positives = 98/221 (44%), Gaps = 15/221 (6%) Query: 5 KKTIAVVNATGRQAASLIRVAAAVG-HHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNN 63 KK + V TG Q S+ R G VR + + A+EL+ + + QG + Sbjct: 11 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELR-LQGAEVVQGDQDDQ 69 Query: 64 VPLMDTLFEGAHLAFINT----TSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPD-HSL 118 V +M+ GA+ FI T + E+ GK LAD A+R G + + +YS + + L Sbjct: 70 V-IMELALNGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLG-LHYVVYSGLENIKKL 127 Query: 119 YGPWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWH 178 A + K VE Y R +G+P T V Y N S P + PDG Sbjct: 128 TAGRLAAAHFDGKGEVEEYFRDIGVPMTSVRLPCYFENLLSHFLP----QKAPDGKSYLL 183 Query: 179 APFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALT 219 + D+P+ + D+GP +L + K P+K+ G I L+ Sbjct: 184 SLPTGDVPMDGMSVS-DLGPVVLSLLK-MPEKYVGQNIGLS 222 >5F5N-A nrPDB Length = 289 Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 67/233 (28%), Positives = 102/233 (43%), Gaps = 20/233 (8%) Query: 5 KKTIAVVNATGRQAASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNV 64 +TI V ATG Q + +R A G VRA V G A A V+L G L + Sbjct: 1 NRTILVTGATGTQGGATVRALLARGRPVRALVRD-PGTDAARALAAAGVSLVTGDLNDQA 59 Query: 65 PLMDTLFEGAHLAF----INTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYG 120 L + + H F T G E+ G+ +ADAA G ++H +YSS+ Sbjct: 60 SLRAAMAD-VHGVFSVQTFMTPGGLGAELRQGRAVADAAAATG-VRHVVYSSVGGADRA- 116 Query: 121 PWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSL-PYPLFQMELMPDGTFEWHA 179 VP + K+T+E ++R LG+P+T + + +NF + P + DGT Sbjct: 117 --SGVPHFETKWTIERHLRSLGVPTTVLRPTFFMDNFAAWGPQAV-------DGTLVVRL 167 Query: 180 PFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFETLSPVQVCAAF 232 P P + + AE D+G F D P + G + L + L+ ++ A F Sbjct: 168 PLKPQTRVQLIAAE-DIGVFAATAFDD-PDTYVGAALELAGDELTGPELAARF 218 >5H1Z-A nrPDB Length = 407 Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust. Identities = 34/139 (24%), Positives = 49/139 (35%), Gaps = 42/139 (30%) Query: 115 DHSLYGPWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLF--------- 165 +HS +GP+ +V + P TVE+ A NN T + P+F Sbjct: 41 EHSDFGPYWSVSSYKPIITVESLPDLYSSAGGITLADFIENNPTDVRMPMFIAMDRPKHT 100 Query: 166 -------------QMELMPDG----------TFEWHAPFDPDIPLPWLDA-EHDVGPALL 201 +M M D + EW+ PFD W+D ++ +L Sbjct: 101 GQRRTVAPAFTPSEMVRMSDNIRMRTAEVLDSLEWNTPFD------WVDTVSVELTTQML 154 Query: 202 QIFKDGPQKWNGHRIALTF 220 I D P W R LTF Sbjct: 155 AILFDFP--WEERR-KLTF 170 >2O3G-A nrPDB Length = 92 Score = 28.9 bits (63), Expect = 3.2, Method: Compositional matrix adjust. Identities = 13/23 (56%), Positives = 16/23 (69%) Query: 34 AQVHSLKGLIAEELQAIPNVTLF 56 A H++ GLI EELQ IP+V F Sbjct: 43 ADFHTVAGLIMEELQTIPDVGDF 65 >2KGL-A nrPDB Length = 195 Score = 28.9 bits (63), Expect = 3.9, Method: Compositional matrix adjust. Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Query: 271 EHKAPYFPLPEFSRPAAGSPKGLGPANGKGAGAGMMQGPGGVISQRVTDEARKLWSG 327 EHK P P+ +FS+ G P+ + KG M G +++ T+E LW G Sbjct: 45 EHKRPSAPI-DFSKLDPGKPESILKMTKKGKTLMMFVTVSGNPTEKETEEITSLWQG 100 >5XF9-D nrPDB Length = 468 Score = 28.1 bits (61), Expect = 6.7, Method: Compositional matrix adjust. Identities = 32/126 (25%), Positives = 50/126 (39%), Gaps = 8/126 (6%) Query: 189 WLDAEHDVGPALLQI--------FKDGPQKWNGHRIALTFETLSPVQVCAAFSRALNRRV 240 WLD + V A L I F G W + + PV A ++AL+R V Sbjct: 40 WLDDDGQVVEARLHIVEFRGFEAFIVGRPYWEAPVVVQRLCGICPVSHHLAAAKALDRLV 99 Query: 241 TYVQVPKVEIKVNIPVGYREQLEAIEVVFGEHKAPYFPLPEFSRPAAGSPKGLGPANGKG 300 Q+P K+ + Y + L++ + F AP L + PA + GL + Sbjct: 100 GVTQLPPTAEKMRRLMHYGQVLQSHALHFFYLAAPDLLLGFSADPAQRNVFGLAAQKREL 159 Query: 301 AGAGMM 306 A G++ Sbjct: 160 ARQGIL 165 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 2VUU-A nrPDB 613 e-176 2EXX-A nrPDB 265 2e-71 5F5N-A nrPDB 237 6e-63 Sequences not found previously or not previously below threshold: 1QYC-A nrPDB 72 3e-13 1QYD-A nrPDB 52 3e-07 2QYS-A nrPDB 52 3e-07 2NNL-D nrPDB 45 4e-05 4R1T-A nrPDB 45 6e-05 4R1U-A nrPDB 41 8e-04 3HFS-A nrPDB 41 0.001 4QUK-A nrPDB 38 0.007 2Q4B-A nrPDB 37 0.010 2P4H-X nrPDB 37 0.018 2CVO-A nrPDB 36 0.021 1UDA-A nrPDB 36 0.027 3E9N-A nrPDB 35 0.066 1HE4-A nrPDB 33 0.21 4N7R-A nrPDB 33 0.25 2KGL-A nrPDB 32 0.31 1ZZE-A nrPDB 32 0.47 4IIV-A nrPDB 31 0.86 3K5H-A nrPDB 30 1.3 1RPN-A nrPDB 30 1.4 4B4O-A nrPDB 30 1.4 4WOK-A nrPDB 30 1.6 5YBB-A nrPDB 30 1.8 5N2I-A nrPDB 30 1.9 1WG8-A nrPDB 30 2.0 5XVD-L nrPDB 29 2.3 4IV1-A nrPDB 29 3.7 3PWS-A nrPDB 29 4.1 3U5T-A nrPDB 29 4.4 5HL7-P nrPDB 29 4.9 5OVL-A nrPDB 29 4.9 5OVJ-A nrPDB 29 4.9 4J6F-A nrPDB 28 5.1 1U5K-A nrPDB 28 6.7 3SLK-A nrPDB 28 7.9 1SJP-A nrPDB 28 7.9 4CQM-B nrPDB 28 8.3 4HST-B nrPDB 28 8.6 2R00-A nrPDB 27 8.9 2HJS-A nrPDB 27 9.8 >2VUU-A nrPDB Length = 352 Score = 613 bits (1581), Expect = e-176, Method: Composition-based stats. Identities = 352/352 (100%), Positives = 352/352 (100%) Query: 1 MAQQKKTIAVVNATGRQAASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPL 60 MAQQKKTIAVVNATGRQAASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPL Sbjct: 1 MAQQKKTIAVVNATGRQAASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPL 60 Query: 61 LNNVPLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYG 120 LNNVPLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYG Sbjct: 61 LNNVPLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYG 120 Query: 121 PWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAP 180 PWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAP Sbjct: 121 PWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAP 180 Query: 181 FDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFETLSPVQVCAAFSRALNRRV 240 FDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFETLSPVQVCAAFSRALNRRV Sbjct: 181 FDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFETLSPVQVCAAFSRALNRRV 240 Query: 241 TYVQVPKVEIKVNIPVGYREQLEAIEVVFGEHKAPYFPLPEFSRPAAGSPKGLGPANGKG 300 TYVQVPKVEIKVNIPVGYREQLEAIEVVFGEHKAPYFPLPEFSRPAAGSPKGLGPANGKG Sbjct: 241 TYVQVPKVEIKVNIPVGYREQLEAIEVVFGEHKAPYFPLPEFSRPAAGSPKGLGPANGKG 300 Query: 301 AGAGMMQGPGGVISQRVTDEARKLWSGWRDMEEYAREVFPIEEEANGLDWML 352 AGAGMMQGPGGVISQRVTDEARKLWSGWRDMEEYAREVFPIEEEANGLDWML Sbjct: 301 AGAGMMQGPGGVISQRVTDEARKLWSGWRDMEEYAREVFPIEEEANGLDWML 352 >2EXX-A nrPDB Length = 306 Score = 265 bits (677), Expect = 2e-71, Method: Composition-based stats. Identities = 67/244 (27%), Positives = 107/244 (43%), Gaps = 16/244 (6%) Query: 5 KKTIAVVNATGRQAASLIRVAAAVG-HHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNN 63 KK + V TG Q S+ R G VR + + A+EL+ + + QG + Sbjct: 11 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELR-LQGAEVVQGDQDDQ 69 Query: 64 VPLMDTLFEGAHLAFINT----TSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPD-HSL 118 V +M+ GA+ FI T + E+ GK LAD A+R G + + +YS + + L Sbjct: 70 V-IMELALNGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLG-LHYVVYSGLENIKKL 127 Query: 119 YGPWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWH 178 A + K VE Y R +G+P T V Y N S P + PDG Sbjct: 128 TAGRLAAAHFDGKGEVEEYFRDIGVPMTSVRLPCYFENLLSHFLP----QKAPDGKSYLL 183 Query: 179 APFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFETLSPVQVCAAFSRALNR 238 + D+P+ + D+GP +L + K P+K+ G I L+ + + A ++ R Sbjct: 184 SLPTGDVPMDGMSVS-DLGPVVLSLLK-MPEKYVGQNIGLSTCRHTAEEYAALLTKH-TR 240 Query: 239 RVTY 242 +V + Sbjct: 241 KVVH 244 >5F5N-A nrPDB Length = 289 Score = 237 bits (604), Expect = 6e-63, Method: Composition-based stats. Identities = 67/233 (28%), Positives = 102/233 (43%), Gaps = 20/233 (8%) Query: 5 KKTIAVVNATGRQAASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNV 64 +TI V ATG Q + +R A G VRA V G A A V+L G L + Sbjct: 1 NRTILVTGATGTQGGATVRALLARGRPVRALVRDP-GTDAARALAAAGVSLVTGDLNDQA 59 Query: 65 PLMDTLFEGAHLAF----INTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYG 120 L + + H F T G E+ G+ +ADAA G ++H +YSS+ Sbjct: 60 SLRAAMAD-VHGVFSVQTFMTPGGLGAELRQGRAVADAAAATG-VRHVVYSSVGGADRA- 116 Query: 121 PWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSL-PYPLFQMELMPDGTFEWHA 179 VP + K+T+E ++R LG+P+T + + +NF + P + DGT Sbjct: 117 --SGVPHFETKWTIERHLRSLGVPTTVLRPTFFMDNFAAWGPQAV-------DGTLVVRL 167 Query: 180 PFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFETLSPVQVCAAF 232 P P + + AE D+G F D P + G + L + L+ ++ A F Sbjct: 168 PLKPQTRVQLIAAE-DIGVFAATAFDD-PDTYVGAALELAGDELTGPELAARF 218 >1QYC-A nrPDB Length = 308 Score = 72.5 bits (176), Expect = 3e-13, Method: Composition-based stats. Identities = 42/252 (16%), Positives = 96/252 (38%), Gaps = 18/252 (7%) Query: 8 IAVVNATGRQAASLIRVAAAVGHHVRAQVH------SLKGLIAEELQAIPNVTLFQGPLL 61 I ++ ATG + + + +GH V + + E + G + Sbjct: 7 ILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSID 66 Query: 62 NNVPLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPD--HSLY 119 ++ L++ + + + Q ++ I K + K GT++ + S + +++ Sbjct: 67 DHASLVEAVKNVDVVISTVGSLQIESQVNIIKAI----KEVGTVKRFFPSEFGNDVDNVH 122 Query: 120 GPWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHA 179 PA ++ K V + G+P T+V + + F + P Sbjct: 123 AVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAGYFLR-SLAQAGLTAPPRDKVVILG 181 Query: 180 PFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGH-RIALTFETLSPVQVCAAFSRALNR 238 D + + ++ E D+G ++ D P+ N + L TLS ++ A + + +++ Sbjct: 182 --DGNARVVFVK-EEDIGTFTIKAVDD-PRTLNKTLYLRLPANTLSLNELVALWEKKIDK 237 Query: 239 RVTYVQVPKVEI 250 + VP+ E+ Sbjct: 238 TLEKAYVPEEEV 249 >1QYD-A nrPDB Length = 313 Score = 52.4 bits (124), Expect = 3e-07, Method: Composition-based stats. Identities = 42/217 (19%), Positives = 79/217 (36%), Gaps = 12/217 (5%) Query: 4 QKKTIAVVNATGRQAASLIRVAAAVGHHVRAQVHSLKGLIAEELQAI-----PNVTLFQG 58 +K + +V TG ++ + ++GH +++Q + L + Sbjct: 3 KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEA 62 Query: 59 PLLNNVPLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSM---PD 115 L ++ L+D L + + I L +A K AG I+ ++ S PD Sbjct: 63 SLDDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPD 122 Query: 116 HSLYGPWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTF 175 + P + K V + +P T+V + ++ F L + P Sbjct: 123 IMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKV 182 Query: 176 EWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWN 212 + D ++ W+D E DVG ++ D PQ N Sbjct: 183 LIYG--DGNVKGIWVD-EDDVGTYTIKSIDD-PQTLN 215 >2QYS-A nrPDB Length = 318 Score = 52.4 bits (124), Expect = 3e-07, Method: Composition-based stats. Identities = 44/254 (17%), Positives = 101/254 (39%), Gaps = 24/254 (9%) Query: 5 KKTIAVVNATGRQAASLIRVAAAVGHHVRAQVH--SLKGLIAEELQAIPNVTLFQGPLLN 62 K I + TG +++ + +GH S K + +E Q++ + +G L Sbjct: 11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSL-GAIIVKGELDE 69 Query: 63 NVPLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYS--SMPDHSLYG 120 + L++ + + + + + + K L +A K AG I+ ++ S + + + Sbjct: 70 HEKLVELMKK---VDVVISALAFPQILDQFKIL-EAIKVAGNIKRFLPSDFGVEEDRINA 125 Query: 121 PWPAVPMWAPKFTVENYVRQLGLPSTFVYAGI---YNNNFTSLPYPLFQMELMPDGTFEW 177 P + K + + + +P T+V A Y N+ PY D E Sbjct: 126 LPPFEALIERKRMIRRAIEEANIPYTYVSANCFASYFINYLLRPY---------DPKDEI 176 Query: 178 HAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRI-ALTFETLSPVQVCAAFSRAL 236 + ++ E D+G +++ D P+ N I + ++ +++ + + + + Sbjct: 177 TVYGTGEAKF-AMNYEQDIGLYTIKVATD-PRALNRVVIYRPSTNIITQLELISRWEKKI 234 Query: 237 NRRVTYVQVPKVEI 250 ++ + VP+ EI Sbjct: 235 GKKFKKIHVPEEEI 248 >2NNL-D nrPDB Length = 337 Score = 45.1 bits (105), Expect = 4e-05, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 32/87 (36%), Gaps = 6/87 (6%) Query: 1 MAQQKKTIAVVNATGRQAASLIRVAAAVGHHVRAQVHSLKG-LIAEELQAIPNVT----L 55 M Q +T+ V A+G + L+ G+ VRA V + L +P L Sbjct: 1 MGSQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTL 60 Query: 56 FQGPLLNNVPLMDTLFEGAHLAFINTT 82 ++ L + D +G F T Sbjct: 61 WKADLADEGSF-DEAIKGCTGVFHVAT 86 >4R1T-A nrPDB Length = 337 Score = 44.7 bits (104), Expect = 6e-05, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 47/121 (38%), Gaps = 14/121 (11%) Query: 6 KTIAVVNATGRQAASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNV----TLFQGPLL 61 + + V A G A+ L+++ G+ VR V + L+ + TL + LL Sbjct: 11 QVVCVTGAGGFIASWLVKILLEKGYTVRGTVRNPDDPKNGHLRELEGAKERLTLCKADLL 70 Query: 62 NNVPLMDTLFEGAHLAFINTTSQAGDEIAI--------GKDLADAAKRAGTIQHYIYSSM 113 + L + + G F +T S D+ K++ +AA A + SS+ Sbjct: 71 DYQSLREAI-NGCDGVF-HTASPVTDDPEQMVEPAVIGTKNVINAAAEANVRRVVFTSSI 128 Query: 114 P 114 Sbjct: 129 G 129 >4R1U-A nrPDB Length = 349 Score = 40.9 bits (94), Expect = 8e-04, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 5/78 (6%) Query: 5 KKTIAVVNATGRQAASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNV----TLFQGPL 60 +T+ V A G A+ L+++ G+ VR V + + L+ + TL + L Sbjct: 27 DQTVCVTGAGGFIASWLVKLLLERGYTVRGTVRNPEDPKNGHLKELEGARERLTLHKVDL 86 Query: 61 LNNVPLMDTLFEGAHLAF 78 L+ + ++ G H F Sbjct: 87 LDLQSI-QSVVHGCHGVF 103 >3HFS-A nrPDB Length = 338 Score = 40.9 bits (94), Expect = 0.001, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 40/96 (41%), Gaps = 8/96 (8%) Query: 1 MAQQ----KKTIAVVNATGRQAASLIRVAAAVGHHVRAQVHSL--KGLIAE--ELQAIPN 52 MA Q KKT VV TG A+ L+++ G+ V V + ++ ELQ + + Sbjct: 1 MATQHPIGKKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGD 60 Query: 53 VTLFQGPLLNNVPLMDTLFEGAHLAFINTTSQAGDE 88 + +F+ L + + + + + T E Sbjct: 61 LKIFRADLTDELSFEAPIAGCDFVFHVATPVHFASE 96 >4QUK-A nrPDB Length = 319 Score = 37.8 bits (86), Expect = 0.007, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 32/77 (41%), Gaps = 6/77 (7%) Query: 7 TIAVVNATGRQAASLIRVAAAVGHHVRAQVHSLKG-LIAEELQAIPNV----TLFQGPLL 61 + V A+G A+ L+R+ G+ V+A V + L + LF+ LL Sbjct: 2 VVCVTGASGYIASWLVRLLLHRGYTVKATVRDPNDPKKVDHLVKLDGAKERLQLFKANLL 61 Query: 62 NNVPLMDTLFEGAHLAF 78 D++ +G H F Sbjct: 62 EEGAF-DSVVQGCHGVF 77 >2Q4B-A nrPDB Length = 253 Score = 37.4 bits (85), Expect = 0.010, Method: Composition-based stats. Identities = 38/178 (21%), Positives = 59/178 (33%), Gaps = 33/178 (18%) Query: 7 TIAVVNATGRQAASLIRVAAA--VGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNN- 63 T+ V A+GR + + + V S +G + +F G + + Sbjct: 6 TVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKE----KIGGEADVFIGDITDAD 61 Query: 64 ------------------VPLMDTLFE---GAHLAFINTTSQAGDEIA-IG-KDLADAAK 100 VP M F+ G FI Q +++ IG K+ DAAK Sbjct: 62 SINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAK 121 Query: 101 RAGTIQHYIYSSMPDHSLYGPWPAVPM---WAPKFTVENYVRQLGLPSTFVYAGIYNN 155 AG + SM + P + K E Y+ G P T + AG + Sbjct: 122 VAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLD 179 >2P4H-X nrPDB Length = 322 Score = 36.6 bits (83), Expect = 0.018, Method: Composition-based stats. Identities = 24/154 (15%), Positives = 49/154 (31%), Gaps = 18/154 (11%) Query: 5 KKTIAVVNATGRQAASLIRVAAAVGHHVRAQVHSLK--GLIAEELQAIPNVT----LFQG 58 K + V TG + +I+ G+ V + + L +P + F Sbjct: 1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNA 60 Query: 59 PLLNNVPLMDTLFEGAHLAF-----INTTSQAGDEIAIGKDL------ADAAKRAGTIQH 107 L N EG F I+ +EI + + A + T++ Sbjct: 61 DLSNPDSF-AAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKR 119 Query: 108 YIYSSMPDHSLYGPWPAVPMWAPKFTVENYVRQL 141 +IY+S + + ++ + +R + Sbjct: 120 FIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSV 153 >2CVO-A nrPDB Length = 366 Score = 36.2 bits (82), Expect = 0.021, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 40/129 (31%), Gaps = 9/129 (6%) Query: 8 IAVVNATGRQAASLIRVAAAV-GHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPL 66 IAV+ A+G A ++R+ A ++ K A E L L N V + Sbjct: 26 IAVLGASGYTGAEIVRLLANHPQFRIKVMTADRK---AGEQFGSVFPHLITQDLPNLVAV 82 Query: 67 MDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGPWPAVP 126 D F F EI G + + + D + Y W Sbjct: 83 KDADFSNVDAVFCCLPHGTTQEIIKG-----LPQELKIVDLSADFRLRDINEYAEWYGHS 137 Query: 127 MWAPKFTVE 135 AP+ E Sbjct: 138 HRAPELQQE 146 >1UDA-A nrPDB Length = 338 Score = 35.9 bits (81), Expect = 0.027, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 68/211 (32%), Gaps = 35/211 (16%) Query: 8 IAVVNATGRQAASLIRVAAAVGHHVRAQVH--SLKGLIAEELQAIPNV--TLFQGPLLNN 63 + V +G + GH V + + K + ++ + T +G + N Sbjct: 3 VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNE 62 Query: 64 VPLMDTLFEGAHLAFINTTS--QAGDEIAI----------GKDLADAAKRAGTIQHYIYS 111 + + L + A I+ G+ + G +A RA ++++I+S Sbjct: 63 ALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFS 122 Query: 112 SMPDHSLYGPWPAVPMWA-------------PKFTVENYVRQL--GLPSTFVYAGIYNNN 156 S ++YG P +P K VE + L P + Y N Sbjct: 123 S--SATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNP 180 Query: 157 FTSLPYPLFQMELMPDGTFEWHAPFDPDIPL 187 + P M P G P+ + + Sbjct: 181 VGAH--PSGDMGEDPQGIPNNLMPYIAQVAV 209 >3E9N-A nrPDB Length = 245 Score = 34.7 bits (78), Expect = 0.066, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 3/64 (4%) Query: 1 MAQQKKTIAVVNATGRQAASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPL 60 M+ +KK V ATG +++ + H V A + + L A L I V + + Sbjct: 1 MSLKKKIAVVTGATGGMGIEIVKD-LSRDHIVYALGRNPEHLAA--LAEIEGVEPIESDI 57 Query: 61 LNNV 64 + V Sbjct: 58 VKEV 61 >1HE4-A nrPDB Length = 206 Score = 32.8 bits (73), Expect = 0.21, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 26/66 (39%), Gaps = 3/66 (4%) Query: 6 KTIAVVNATGRQAASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVP 65 K IA+ ATG+ + + A G+ V V L +E + + G +L Sbjct: 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRP---AHVVVGDVLQAAD 60 Query: 66 LMDTLF 71 + T+ Sbjct: 61 VDKTVA 66 >4N7R-A nrPDB Length = 472 Score = 32.8 bits (73), Expect = 0.25, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 42/103 (40%), Gaps = 5/103 (4%) Query: 13 ATGRQAASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFE 72 G+ +I+ A G V+ + ++ + +P + + PL M Sbjct: 214 GAGKMGKLVIKHLMAKGCTKVVVVNRSEERVSAIREEMPGIEIIYRPLDE----MLACAS 269 Query: 73 GAHLAFINTTSQAGDEIAIG-KDLADAAKRAGTIQHYIYSSMP 114 A + F +T S+ + ++L A+ G ++H++ S+P Sbjct: 270 EADVVFTSTASETPLFLKEHVENLPQASPEVGGLRHFVDISVP 312 >2KGL-A nrPDB Length = 195 Score = 32.4 bits (72), Expect = 0.31, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Query: 271 EHKAPYFPLPEFSRPAAGSPKGLGPANGKGAGAGMMQGPGGVISQRVTDEARKLWSG 327 EHK P P+ +FS+ G P+ + KG M G +++ T+E LW G Sbjct: 45 EHKRPSAPI-DFSKLDPGKPESILKMTKKGKTLMMFVTVSGNPTEKETEEITSLWQG 100 >1ZZE-A nrPDB Length = 342 Score = 31.6 bits (70), Expect = 0.47, Method: Composition-based stats. Identities = 31/158 (19%), Positives = 54/158 (34%), Gaps = 15/158 (9%) Query: 4 QKKTIAVVNATGRQAASLIRVAAAVGHHVRAQVHSLKGLIAEELQ---AIPN--VTLFQG 58 + + V A G A+ ++ G+ VR S L + + P T Sbjct: 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVE 69 Query: 59 PLLNNVP---LMDTLFEGAHLAFINTTSQAGDEI---AIG---KDLADAAKRAGTIQHYI 109 +L ++ AH+A + + S DE+ AIG L AA + + Sbjct: 70 DMLKQGAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVL 129 Query: 110 YSSMPDHSLYGPWPAVPMWAPK-FTVENYVRQLGLPST 146 SS + P K + +E+ + LP + Sbjct: 130 TSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPES 167 >4IIV-A nrPDB Length = 267 Score = 30.9 bits (68), Expect = 0.86, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 31/88 (35%), Gaps = 6/88 (6%) Query: 5 KKTIAVVNATGRQAASLIRVAAAVGHHVRAQVHSLKGLIAEELQAI----PNVTLFQGPL 60 +++ V A+ ++ R AA G ++ H E L AI N L + Sbjct: 26 SRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDV 85 Query: 61 LNNVPLMDTLFEGA--HLAFINTTSQAG 86 N + L H A+ S AG Sbjct: 86 ANREQCREVLEHEIAQHGAWYGVVSNAG 113 >3K5H-A nrPDB Length = 403 Score = 30.5 bits (67), Expect = 1.3, Method: Composition-based stats. Identities = 30/174 (17%), Positives = 55/174 (31%), Gaps = 34/174 (19%) Query: 62 NNVPLMDTLFEGAHLAFINTTSQAGDE-IAIGKDLADAAKRAGTIQHYIYSSMPDH---- 116 +N P H T S E + D I+H ++ + Sbjct: 56 DNSPAKQISAHDGH----VTGSFKEREAVRQLAKTCDVV--TAEIEHVDTYALEEVASEV 109 Query: 117 SLYGPWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNN--------NFTSLPYPLFQME 168 + W A+ KF + ++R+ G+P + N P L Sbjct: 110 KIEPSWQAIRTIQNKFNQKEHLRKYGIPMAEHRELVENTPAELAKVGEQLGYPLMLKSKT 169 Query: 169 LMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGP---QKWNGHRIALT 219 + DG + ++++ D+ P L+ KD P +KW ++ L Sbjct: 170 MAYDGRGNFR-----------VNSQDDI-PEALEALKDRPLYAEKWAYFKMELA 211 >1RPN-A nrPDB Length = 335 Score = 30.1 bits (66), Expect = 1.4, Method: Composition-based stats. Identities = 10/71 (14%), Positives = 25/71 (35%), Gaps = 3/71 (4%) Query: 6 KTIAVVNATGRQAASLIRVAAAVGHHVRAQVHSLKGLIAEELQAI---PNVTLFQGPLLN 62 ++ V TG+ A L ++ G+ V V L+ + ++ G + + Sbjct: 15 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMAD 74 Query: 63 NVPLMDTLFEG 73 + + + Sbjct: 75 ACSVQRAVIKA 85 >4B4O-A nrPDB Length = 298 Score = 30.1 bits (66), Expect = 1.4, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 17/47 (36%), Gaps = 1/47 (2%) Query: 8 IAVVNATGRQAASLIRVAAAVGHHVRAQVHSL-KGLIAEELQAIPNV 53 + V TG +L ++ A GH V G I + A + Sbjct: 3 VLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPGRITWDELAASGL 49 >4WOK-A nrPDB Length = 336 Score = 30.1 bits (66), Expect = 1.6, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 40/93 (43%), Gaps = 8/93 (8%) Query: 8 IAVVNATGRQAASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLM 67 + VV G + ++ A G+ V+ L A+ +G +L+ L+ Sbjct: 14 VLVVGGAGFIGSHTAKLLAGQGYA--PVVYD--NLSTGHQSAVRWGDFVEGDILDQARLV 69 Query: 68 DTLFEGAHLAFINTTSQAGDEIAIGKDLADAAK 100 +T+ + A +A I+ + A +G+ + D AK Sbjct: 70 ETMEKYAPVAVIHFAASA----YVGESVEDPAK 98 >5YBB-A nrPDB Length = 507 Score = 29.7 bits (65), Expect = 1.8, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 3/43 (6%) Query: 310 GGVISQRVTDEARKLWSGWRDMEEYAREVFPIEEEANGLDWML 352 G I +EARKLW GW + Y + + P+E + W++ Sbjct: 399 GNPIQDEHFEEARKLWRGW---DAYRKGLGPVEACLSERSWIV 438 >5N2I-A nrPDB Length = 232 Score = 29.7 bits (65), Expect = 1.9, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 6/52 (11%) Query: 7 TIAVVNATGRQAASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQG 58 +IAV+ TG Q L R A GH V S AE QA+ L +G Sbjct: 21 SIAVLGGTGDQGRGLARRFAMAGHEVILGSRS-----AERAQAVA-AELGEG 66 >1WG8-A nrPDB Length = 285 Score = 29.7 bits (65), Expect = 2.0, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 14/42 (33%) Query: 18 AASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGP 59 A R G V + + + +P +T+ QG Sbjct: 33 GAGHARGILERGGRVIGLDQDPEAVARAKGLHLPGLTVVQGN 74 >5XVD-L nrPDB Length = 552 Score = 29.3 bits (64), Expect = 2.3, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 54/153 (35%), Gaps = 36/153 (23%) Query: 172 DGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHR---------IALTFET 222 DG + W + +VGP + K ++ + H LT +T Sbjct: 359 DGKYSWVKAPT------FYGKTVEVGPLANMLCKLAAKRESTHAKLNEIVAIYTKLTGKT 412 Query: 223 LSPVQVCAAFSRALNRRVTYVQVPKVEIKVNIPVGYREQLEAIEVVFGEHKAPYFPLPEF 282 + Q+ + R + R V ++ V ++Q A+ V G+ F P+ Sbjct: 413 IEVAQLHSTLGRIIGRTVHCCELQNV---------LQDQYNALIVNIGKGDHTTFVKPDI 463 Query: 283 SRPAAGSPKGLGPANGKGAGAGMMQGPGGVISQ 315 PA G+ G G ++ P G++S Sbjct: 464 ------------PATGEFKGVGFLEAPRGMLSH 484 >4IV1-A nrPDB Length = 211 Score = 28.9 bits (63), Expect = 3.7, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 39/110 (35%), Gaps = 17/110 (15%) Query: 128 WAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPY--PLFQMELMPDGTFEWHAPFDPDI 185 W P E + G P+ ++ A +LPY P + + +GT ++ A Sbjct: 88 WVPNGAPEAALSNTGNPTAYLKAPF---TRLALPYTAPHRVLATVYNGTSKYSAGGTGR- 143 Query: 186 PLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFETLSPVQVCAAFSRA 235 D+GP ++ P +N I T + ++ RA Sbjct: 144 -------RGDLGPLAARVAAQLPASFNFGAIQAT----TIHELLVRMKRA 182 >3PWS-A nrPDB Length = 366 Score = 28.5 bits (62), Expect = 4.1, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 34/97 (35%), Gaps = 13/97 (13%) Query: 7 TIAVVNATGRQAASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNV-P 65 T+AVV ATG A +I++ + + L + +L + Sbjct: 4 TVAVVGATGAVGAQMIKMLEESTLPIDKI----RYLASAR---SAGKSLKFKDQDITIEE 56 Query: 66 LMDTLFEGAHLAFINTTSQAGDE-----IAIGKDLAD 97 +T FEG +A + S + + G + D Sbjct: 57 TTETAFEGVDIALFSAGSSTSAKYAPYAVKAGVVVVD 93 >3U5T-A nrPDB Length = 267 Score = 28.5 bits (62), Expect = 4.4, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 27/76 (35%), Gaps = 6/76 (7%) Query: 1 MAQQKKTIAVVNATGRQAASLIRVAAAVGHHVRAQVHSLKGLIAEE----LQAIPNVTLF 56 M + K V A+ A++ A+ G V ++ K AEE ++A L Sbjct: 23 MMETNKVAIVTGASRGIGAAIAARLASDGFTV-VINYAGKAAAAEEVAGKIEAAGGKALT 81 Query: 57 -QGPLLNNVPLMDTLF 71 Q + + + Sbjct: 82 AQADVSDPAAVRRLFA 97 >5HL7-P nrPDB Length = 117 Score = 28.5 bits (62), Expect = 4.9, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 25/65 (38%) Query: 17 QAASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHL 76 +A ++ R VR + ++G A E AI +T + LM L H Sbjct: 2 EAKAVARTIRIAPRKVRLVLDLIRGKNAAEAIAILKLTNKASSPVIEKVLMSALANAEHN 61 Query: 77 AFINT 81 +NT Sbjct: 62 YDMNT 66 >5OVL-A nrPDB Length = 300 Score = 28.5 bits (62), Expect = 4.9, Method: Composition-based stats. Identities = 10/37 (27%), Positives = 15/37 (40%), Gaps = 1/37 (2%) Query: 5 KKTIAVVNATGRQAASLIRVAAAVGHHVRAQVHSLKG 41 +++ V ++ R AA GH V A H G Sbjct: 68 SRSVLVTGGNRGIGLAIARRLAADGHKV-AVTHRGSG 103 >5OVJ-A nrPDB Length = 256 Score = 28.5 bits (62), Expect = 4.9, Method: Composition-based stats. Identities = 10/37 (27%), Positives = 15/37 (40%), Gaps = 1/37 (2%) Query: 5 KKTIAVVNATGRQAASLIRVAAAVGHHVRAQVHSLKG 41 +++ V ++ R AA GH V A H G Sbjct: 24 SRSVLVTGGNRGIGLAIARRLAADGHKV-AVTHRGSG 59 >4J6F-A nrPDB Length = 382 Score = 28.2 bits (61), Expect = 5.1, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 27/59 (45%) Query: 6 KTIAVVNATGRQAASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNV 64 +T+ V A+G +++I++A A G A K ++ A VT QG L V Sbjct: 208 ETVLVTGASGGVGSAIIQLARARGAVPIAVAGPGKEAAMLDIGAQAVVTRGQGDLAEAV 266 >1U5K-A nrPDB Length = 244 Score = 27.8 bits (60), Expect = 6.7, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 28/73 (38%), Gaps = 3/73 (4%) Query: 5 KKTIAVVNATGRQAASLIRVAAAVGHHVRAQVHS-LKGLIAEELQAIP--NVTLFQGPLL 61 ++ V+ A +I ++A +KG ++ L V ++QGP Sbjct: 7 NRSGIVIRRRVTPAGDIIVTLLTPQGKLKAIARGGVKGPLSSSLNLFHHVGVQVYQGPHN 66 Query: 62 NNVPLMDTLFEGA 74 + + + EGA Sbjct: 67 DLASVKQAVLEGA 79 >3SLK-A nrPDB Length = 795 Score = 27.8 bits (60), Expect = 7.9, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 14/46 (30%), Gaps = 3/46 (6%) Query: 7 TIAVVNATGRQAASLIRVA-AAVGHHVRAQV--HSLKGLIAEELQA 49 T+ V TG A + R G V A EL A Sbjct: 532 TVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVA 577 >1SJP-A nrPDB Length = 504 Score = 27.8 bits (60), Expect = 7.9, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 29/77 (37%), Gaps = 3/77 (3%) Query: 4 QKKTIAVVNATG--RQAASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQ-GPL 60 Q++ + + A+ H + V + K + E + A VTL Q P Sbjct: 322 QERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVTLLQAAPT 381 Query: 61 LNNVPLMDTLFEGAHLA 77 L+ + L GA++ Sbjct: 382 LDELKLEGDEATGANIV 398 >4CQM-B nrPDB Length = 244 Score = 27.8 bits (60), Expect = 8.3, Method: Composition-based stats. Identities = 8/41 (19%), Positives = 17/41 (41%) Query: 5 KKTIAVVNATGRQAASLIRVAAAVGHHVRAQVHSLKGLIAE 45 K AV + ++ ++ A G+ + +L+G A Sbjct: 9 DKVCAVFGGSRGIGRAVAQLMARKGYRLAVIARNLEGAKAA 49 >4HST-B nrPDB Length = 543 Score = 27.8 bits (60), Expect = 8.6, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 21/54 (38%) Query: 98 AAKRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENYVRQLGLPSTFVYAG 151 A AG+I H + + +P W VP W+ + ++ +P G Sbjct: 182 AGDVAGSIGHLVRARVPSRPRENGWLPVPGWSGEHEWRGWIPHEAMPRVIDPPG 235 >2R00-A nrPDB Length = 336 Score = 27.4 bits (59), Expect = 8.9, Method: Composition-based stats. Identities = 7/29 (24%), Positives = 13/29 (44%) Query: 4 QKKTIAVVNATGRQAASLIRVAAAVGHHV 32 Q+ +A+ ATG +++ V V Sbjct: 2 QQFNVAIFGATGAVGETMLEVLQEREFPV 30 >2HJS-A nrPDB Length = 340 Score = 27.4 bits (59), Expect = 9.8, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 19/58 (32%) Query: 4 QKKTIAVVNATGRQAASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLL 61 Q +AVV ATG +L+ + + A + +L G + Sbjct: 5 QPLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAESSLRVGDVD 62 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.313 0.130 0.350 Lambda K H 0.267 0.0397 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 13,861,293 Number of Sequences: 36641 Number of extensions: 598509 Number of successful extensions: 1743 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 27 Number of HSP's successfully gapped in prelim test: 34 Number of HSP's that attempted gapping in prelim test: 1700 Number of HSP's gapped (non-prelim): 64 length of query: 352 length of database: 10,336,785 effective HSP length: 98 effective length of query: 254 effective length of database: 6,745,967 effective search space: 1713475618 effective search space used: 1713475618 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 59 (27.4 bits)