BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q5AF03 (236 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 4LRU-A nrPDB 479 e-136 1QVW-A nrPDB 305 8e-84 3KKL-A nrPDB 253 4e-68 5JZM-A nrPDB 58 3e-09 1N57-A nrPDB 46 1e-05 1G2I-A nrPDB 42 3e-04 5XR3-A nrPDB 38 0.004 3L18-A nrPDB 31 0.60 5OF3-B nrPDB 30 1.3 5XJ2-A nrPDB 29 2.2 2IFG-A nrPDB 28 2.9 2VRN-A nrPDB 28 3.5 1OI4-A nrPDB 28 4.7 2Q9U-A nrPDB 28 4.8 4V6W-AL nrPDB 27 6.4 4R6H-A nrPDB 27 7.5 1FXK-C nrPDB 27 8.0 1FUI-A nrPDB 27 8.5 4AIP-A nrPDB 27 9.4 >4LRU-A nrPDB Length = 239 Score = 479 bits (1232), Expect = e-136, Method: Compositional matrix adjust. Identities = 236/236 (100%), Positives = 236/236 (100%) Query: 1 MVKVLLALTSYNETFYSDGKKTGVFVVEALHPFEVFRKKGYEIQLASETGTFGWDDHSVV 60 MVKVLLALTSYNETFYSDGKKTGVFVVEALHPFEVFRKKGYEIQLASETGTFGWDDHSVV Sbjct: 4 MVKVLLALTSYNETFYSDGKKTGVFVVEALHPFEVFRKKGYEIQLASETGTFGWDDHSVV 63 Query: 61 PDFLNGEDKEIFDNVNSEFNVALKNLKKASDLDPNDYDIFFGSAGHGTLFDYPNAKDLQK 120 PDFLNGEDKEIFDNVNSEFNVALKNLKKASDLDPNDYDIFFGSAGHGTLFDYPNAKDLQK Sbjct: 64 PDFLNGEDKEIFDNVNSEFNVALKNLKKASDLDPNDYDIFFGSAGHGTLFDYPNAKDLQK 123 Query: 121 IATTVYDKGGVVSAVCHGPAIFENLNDPKTGEPLIKGKKITGFTDIGEDILGVTDIMKKG 180 IATTVYDKGGVVSAVCHGPAIFENLNDPKTGEPLIKGKKITGFTDIGEDILGVTDIMKKG Sbjct: 124 IATTVYDKGGVVSAVCHGPAIFENLNDPKTGEPLIKGKKITGFTDIGEDILGVTDIMKKG 183 Query: 181 NLLTIKQVAEKEGATYIEPEGPWDNFTVTDGRIVTGVNPQSAVKTAEDVIAAFECN 236 NLLTIKQVAEKEGATYIEPEGPWDNFTVTDGRIVTGVNPQSAVKTAEDVIAAFECN Sbjct: 184 NLLTIKQVAEKEGATYIEPEGPWDNFTVTDGRIVTGVNPQSAVKTAEDVIAAFECN 239 >1QVW-A nrPDB Length = 237 Score = 305 bits (782), Expect = 8e-84, Method: Compositional matrix adjust. Identities = 144/232 (62%), Positives = 178/232 (76%) Query: 3 KVLLALTSYNETFYSDGKKTGVFVVEALHPFEVFRKKGYEIQLASETGTFGWDDHSVVPD 62 KVLLALTSYN+ FYSDG KTGVFVVEALHPF FRK+G+E+ SETG FGWD+HS+ D Sbjct: 5 KVLLALTSYNDVFYSDGMKTGVFVVEALHPFNTFRKEGFEVDFVSETGKFGWDEHSLAKD 64 Query: 63 FLNGEDKEIFDNVNSEFNVALKNLKKASDLDPNDYDIFFGSAGHGTLFDYPNAKDLQKIA 122 FLNG+D+ F N +S+FN L +K +++ +DY IF SAGHGTLFDYP AKDLQ IA Sbjct: 65 FLNGQDETDFKNKDSDFNKTLAKIKTPKEVNADDYQIFMASAGHGTLFDYPKAKDLQDIA 124 Query: 123 TTVYDKGGVVSAVCHGPAIFENLNDPKTGEPLIKGKKITGFTDIGEDILGVTDIMKKGNL 182 + +Y GGVV+AVCHGPA+F+ L D KTG PLI+GK ITGFTD+GE I+GV I+K NL Sbjct: 125 SEIYANGGVVAAVCHGPAMFDGLTDKKTGRPLIEGKSITGFTDVGETIMGVDSILKAKNL 184 Query: 183 LTIKQVAEKEGATYIEPEGPWDNFTVTDGRIVTGVNPQSAVKTAEDVIAAFE 234 T++ VA+K GA Y+ P GPWD++++TDGR+VTGVNP SA TA I A + Sbjct: 185 ATVEDVAKKYGAKYLAPVGPWDDYSITDGRLVTGVNPASAHSTAVRSIDALK 236 >3KKL-A nrPDB Length = 244 Score = 253 bits (647), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 120/231 (51%), Positives = 160/231 (69%) Query: 3 KVLLALTSYNETFYSDGKKTGVFVVEALHPFEVFRKKGYEIQLASETGTFGWDDHSVVPD 62 + L++LTSY+ FY DG KTGVFVVE L F+ F K G+E+ SETG FGWD+H + Sbjct: 5 RALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSETGGFGWDEHYLPKS 64 Query: 63 FLNGEDKEIFDNVNSEFNVALKNLKKASDLDPNDYDIFFGSAGHGTLFDYPNAKDLQKIA 122 F+ GEDK F+ NS FN AL +K A++++ +DY +FF SAGHG LFDYP AK+LQ IA Sbjct: 65 FIGGEDKMNFETKNSAFNKALARIKTANEVNASDYKVFFASAGHGALFDYPKAKNLQDIA 124 Query: 123 TTVYDKGGVVSAVCHGPAIFENLNDPKTGEPLIKGKKITGFTDIGEDILGVTDIMKKGNL 182 + +Y GGV++A+CHGP +F+ L D KT PLI+GK ITGF GE LGV DI++ L Sbjct: 125 SKIYANGGVIAAICHGPLLFDGLIDIKTTRPLIEGKAITGFPLEGEIALGVDDILRSRKL 184 Query: 183 LTIKQVAEKEGATYIEPEGPWDNFTVTDGRIVTGVNPQSAVKTAEDVIAAF 233 T+++VA K GA Y+ P PWD++++TDG++VTGVN S+ T I A Sbjct: 185 TTVERVANKNGAKYLAPIHPWDDYSITDGKLVTGVNANSSYSTTIRAINAL 235 >5JZM-A nrPDB Length = 288 Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 25/163 (15%) Query: 12 NETFYSDGKKTGVFVVEALHPFEVFRKKGYEIQLASETGT---FGWDDHSVVPDFLNGED 68 N TF+S TG VE L P K G+ +A+ +G F W +P ED Sbjct: 69 NGTFFS----TGNHPVETLLPMYHLDKAGFSFDIATLSGNPVKFEW---WAMPR----ED 117 Query: 69 KEIFDNVNSEFNVALKNLKKASDL------DPNDYDIFFGSAGHGTLFDYPNAKDLQKIA 122 +E+ + + S++ + + K SD+ + +DY F GHG L P++++++ + Sbjct: 118 QEV-NGLYSKYQSSFRQPLKLSDVIETALGEDSDYIGVFIPGGHGALMGLPDSQEVKAVL 176 Query: 123 TTVYDKGGVVSAVCHGPAIFENLNDPKTGEPLIKGKKITGFTD 165 + + ++CHGPA F + D +PL G KI F D Sbjct: 177 QWAMKQNKFIISLCHGPAAFLAVGD----DPLFAGYKIVAFPD 215 >1N57-A nrPDB Length = 291 Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 19/155 (12%) Query: 22 TGVFVVEALHPFEVFRKKGYEIQLASETGTFGWDDHSVVPDFLNGEDKEI---FDNVNSE 78 TG +E L P G+E ++A+ +G ++ +P +D+++ F+ S Sbjct: 71 TGNHPIETLLPLYHLHAAGFEFEVATISGLMTKFEYWAMPH----KDEKVMPFFEQHKSL 126 Query: 79 FNVALKNLKKASDL-----DPNDYDIFFGSAGHGTLFDYPNAKDLQKIATTVYDKGGVVS 133 F +N KK +D+ ++Y F GHG L P ++D+ V Sbjct: 127 F----RNPKKLADVVASLNADSEYAAIFVPGGHGALIGLPESQDVAAALQWAIKNDRFVI 182 Query: 134 AVCHGPAIFENLNDPKTGEPLIKGKKITGFTDIGE 168 ++CHGPA F L + G+ + G I F D + Sbjct: 183 SLCHGPAAFLAL---RHGDNPLNGYSICAFPDAAD 214 >1G2I-A nrPDB Length = 166 Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 34/147 (23%) Query: 27 VEALHPFEVFRKKGYEIQLAS-ETGTF-GWDDHSVVPDFLNGEDKEIFDNVNSEFNVALK 84 VE ++P+ +++G+E+ +AS E GT G +SV D FD VN Sbjct: 14 VELIYPYHRLKEEGHEVYIASFERGTITGKHGYSVKVDL-------TFDKVN-------- 58 Query: 85 NLKKASDLDPNDYDIFFGSAGHGTLFDYPNAKDLQKIATTVYDKGGVVSAVCHGPAIFEN 144 P ++D G N K + IA ++ +G V+++CHGP I + Sbjct: 59 ---------PEEFDALVLPGGRAPERVRLNEKAVS-IARKMFSEGKPVASICHGPQILIS 108 Query: 145 LNDPKTGEPLIKGKKITGFTDIGEDIL 171 +++G+K T + I +D++ Sbjct: 109 AG-------VLRGRKGTSYPGIKDDMI 128 >5XR3-A nrPDB Length = 300 Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust. Identities = 41/171 (23%), Positives = 68/171 (39%), Gaps = 14/171 (8%) Query: 3 KVLLALTSYNETFYSDGK--KTGVFVVEALHPFEVFRKKGYEIQLASETGTFGWDDHSVV 60 KVL+ +GK TG VE L P + G+++ +A+ +G + + Sbjct: 54 KVLMIAAEERYVLLENGKMFSTGNHPVEMLLPLHHLMEAGFDVDVATLSGYPVKLELWAM 113 Query: 61 PDFLNGEDKEIFDNVNSEFNVALKNLKKASDLDPN------DYDIFFGSAGHGTLFDYPN 114 P ED+ + N + LK KK +D+ N DY F GH + Sbjct: 114 PT----EDEAVISTYN-KLKEKLKQPKKLADVIKNELGPDSDYLSVFIPGGHAAVVGISE 168 Query: 115 AKDLQKIATTVYDKGGVVSAVCHGPAIFENLNDPKTGEPLIKGKKITGFTD 165 ++D+Q+ D + + HGPA + + PL +G + F D Sbjct: 169 SEDVQQTLDWALDNDRFIVTLXHGPAALLSAGLNREKSPL-EGYSVCVFPD 218 >3L18-A nrPDB Length = 168 Score = 30.8 bits (68), Expect = 0.60, Method: Compositional matrix adjust. Identities = 31/147 (21%), Positives = 62/147 (42%), Gaps = 34/147 (23%) Query: 27 VEALHPFEVFRKKGYEIQLAS-ETGTF-GWDDHSVVPDFLNGEDKEIFDNVNSEFNVALK 84 +E ++P +++G+E+ +AS + G G +SV NV+ F Sbjct: 16 LELIYPLHRIKEEGHEVYVASFQRGKITGKHGYSV--------------NVDLTFE---- 57 Query: 85 NLKKASDLDPNDYDIFFGSAGHGTLFDYPNAKDLQKIATTVYDKGGVVSAVCHGPAIFEN 144 ++DP+++D G N K + I +++ V+++CHGP I Sbjct: 58 ------EVDPDEFDALVLPGGKAPEIVRLNEKAVM-ITRRMFEDDKPVASICHGPQIL-- 108 Query: 145 LNDPKTGEPLIKGKKITGFTDIGEDIL 171 ++KG++ T I +D++ Sbjct: 109 -----ISAKVLKGRRGTSTITIRDDVI 130 >5OF3-B nrPDB Length = 307 Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust. Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 12/89 (13%) Query: 114 NAKDLQKIATTVYDKGGVVSAVCHGPAIFEN-LNDPKTGEPLIKGKKITGFTDIGEDILG 172 N K++ + ++ ++ G++ P EN L K E I+ IT + DIG+ + G Sbjct: 195 NLKEIPEKLKSLIERRGII------PPCIENILAKEKLNEEEIRTL-ITFYIDIGKGLSG 247 Query: 173 VTDIMKKGNLLTIKQVAEK----EGATYI 197 + IMKK N+ ++ + K +G YI Sbjct: 248 IVSIMKKYNVSNVEDLYRKYRGDKGTRYI 276 >5XJ2-A nrPDB Length = 454 Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust. Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 4/49 (8%) Query: 48 ETGTFGWDDHSVVPDFLNGEDKEIFDNVNSEFNVALKNLKKASDLDPND 96 ETG F + H+++P ED I D V + VAL++L + DL P D Sbjct: 142 ETGFFRKNSHNLMP----LEDFFIQDPVIDQVVVALRDLLRRFDLKPYD 186 >2IFG-A nrPDB Length = 347 Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust. Identities = 19/99 (19%), Positives = 41/99 (41%) Query: 136 CHGPAIFENLNDPKTGEPLIKGKKITGFTDIGEDILGVTDIMKKGNLLTIKQVAEKEGAT 195 CHG ++ + G P +K + D+G+D+L + +G + E E + Sbjct: 142 CHGQGPLAHMPNASCGVPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSA 201 Query: 196 YIEPEGPWDNFTVTDGRIVTGVNPQSAVKTAEDVIAAFE 234 + G + +T + + +N ++ AE+ + E Sbjct: 202 TVMKSGGLPSLGLTLANVTSDLNRKNVTCWAENDVGRAE 240 >2VRN-A nrPDB Length = 190 Score = 28.1 bits (61), Expect = 3.5, Method: Compositional matrix adjust. Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 7/81 (8%) Query: 90 SDLDPNDYDIFFGSAGHGTLFDYPNAKDLQKIATTVYDKGGVVSAVCHGPAIFENLNDPK 149 S++ +DYD G + K +YD G ++A+CHGP + Sbjct: 69 SEVQVSDYDGLLLPGGTVNPDKLRLEEGAMKFVRDMYDAGKPIAAICHGPWSLS-----E 123 Query: 150 TGEPLIKGKKITGFTDIGEDI 170 TG + +G K+T ++ + ++ Sbjct: 124 TG--IAQGLKMTSWSSLKREL 142 >1OI4-A nrPDB Length = 193 Score = 27.7 bits (60), Expect = 4.7, Method: Compositional matrix adjust. Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 14/87 (16%) Query: 87 KKASDLDPNDYDIFFGSAGHGTLFDYPNAKDLQKIATTVYD---KGGVVSAVCHGPAIFE 143 K ++ P ++D GH DY + + T D G V A+CHGP + Sbjct: 77 KSIDEVTPAEFDALLLPGGHSP--DYLRGDN--RFVTFTRDFVNSGKPVFAICHGPQLLI 132 Query: 144 NLNDPKTGEPLIKGKKITGFTDIGEDI 170 + + +I+G+K+T I D+ Sbjct: 133 SAD-------VIRGRKLTAVKPIIIDV 152 >2Q9U-A nrPDB Length = 414 Score = 27.7 bits (60), Expect = 4.8, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 33/80 (41%), Gaps = 6/80 (7%) Query: 103 SAGHGTLFDYPNAKDLQKIATTVYDKGGVVSAV-----CHGPAIFENLNDPKTGEPLIKG 157 S G T+ + D+ K+A YD G V A P++ LN + G LIKG Sbjct: 283 STGCETVLLEMTSSDITKVALHTYDSGAVAFASPTLNNTMMPSVAAALNYVR-GLTLIKG 341 Query: 158 KKITGFTDIGEDILGVTDIM 177 K F G V DI+ Sbjct: 342 KPAFAFGAFGWSNRAVPDIV 361 >4V6W-AL nrPDB Length = 155 Score = 27.3 bits (59), Expect = 6.4, Method: Compositional matrix adjust. Identities = 11/24 (45%), Positives = 14/24 (58%) Query: 194 ATYIEPEGPWDNFTVTDGRIVTGV 217 TYI+ + PW GRI+TGV Sbjct: 50 GTYIDKKCPWTGDVRIRGRILTGV 73 >4R6H-A nrPDB Length = 428 Score = 26.9 bits (58), Expect = 7.5, Method: Compositional matrix adjust. Identities = 15/55 (27%), Positives = 24/55 (43%) Query: 78 EFNVALKNLKKASDLDPNDYDIFFGSAGHGTLFDYPNAKDLQKIATTVYDKGGVV 132 E+ L+++K DLDPN I +G + AKD + D+ G+ Sbjct: 104 EYTADLRDMKWTQDLDPNLNSILKNKSGKVYAYPINQAKDGLAYNRNILDRYGIA 158 >1FXK-C nrPDB Length = 133 Score = 26.9 bits (58), Expect = 8.0, Method: Compositional matrix adjust. Identities = 17/59 (28%), Positives = 27/59 (45%) Query: 121 IATTVYDKGGVVSAVCHGPAIFENLNDPKTGEPLIKGKKITGFTDIGEDILGVTDIMKK 179 I + D V+ +V G AI +N D K + + +GE++ +TDIM K Sbjct: 62 IKAELKDTSEVIMSVGAGVAIKKNFEDAMESIKSQKNELESTLQKMGENLRAITDIMMK 120 >1FUI-A nrPDB Length = 591 Score = 26.9 bits (58), Expect = 8.5, Method: Compositional matrix adjust. Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 5/60 (8%) Query: 111 DYPNAKDLQKIATTVYDKGGVVSAVCHGPAIFENLNDPKTGEPLIKGKKITGFTDIGEDI 170 YPN + I + +D GV P + ND G ++ G ++TG + D+ Sbjct: 308 QYPNGDTAEAILNSSFDWNGVRE-----PFVVATENDSLNGVAMLMGHQLTGTAQVFADV 362 >4AIP-A nrPDB Length = 742 Score = 26.6 bits (57), Expect = 9.4, Method: Compositional matrix adjust. Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 4/56 (7%) Query: 32 PFEVFRKKGYEIQLASETGTFGWDDHSVVPDFLNGEDKEIFDNVNSEFNVALKNLK 87 P+ K+ Y LA TFG DDH +V + + + I V EF V K+ + Sbjct: 242 PYSALDKRSY---LAKIGTTFGDDDHRIVLSHMKDQHRGI-RTVREEFTVGDKSSR 293 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4LRU-A nrPDB 357 2e-99 1QVW-A nrPDB 345 1e-95 3KKL-A nrPDB 340 3e-94 5JZM-A nrPDB 173 8e-44 1N57-A nrPDB 168 1e-42 1G2I-A nrPDB 117 4e-27 Sequences not found previously or not previously below threshold: 5XR3-A nrPDB 129 9e-31 3L18-A nrPDB 91 4e-19 4OFW-A nrPDB 67 5e-12 1OI4-A nrPDB 54 6e-08 1PDW-A nrPDB 50 7e-07 4E08-A nrPDB 48 3e-06 2VRN-A nrPDB 44 7e-05 5SY4-A nrPDB 40 0.001 1OY1-A nrPDB 37 0.005 3OT1-B nrPDB 37 0.005 3MGK-A nrPDB 37 0.007 5OF3-B nrPDB 31 0.34 4GE0-A nrPDB 31 0.37 6FBA-A nrPDB 31 0.61 5LD2-D nrPDB 29 1.6 6BT9-A nrPDB 29 1.6 2NSM-A nrPDB 28 4.5 6AN0-A nrPDB 27 6.1 >4LRU-A nrPDB Length = 239 Score = 357 bits (917), Expect = 2e-99, Method: Composition-based stats. Identities = 236/236 (100%), Positives = 236/236 (100%) Query: 1 MVKVLLALTSYNETFYSDGKKTGVFVVEALHPFEVFRKKGYEIQLASETGTFGWDDHSVV 60 MVKVLLALTSYNETFYSDGKKTGVFVVEALHPFEVFRKKGYEIQLASETGTFGWDDHSVV Sbjct: 4 MVKVLLALTSYNETFYSDGKKTGVFVVEALHPFEVFRKKGYEIQLASETGTFGWDDHSVV 63 Query: 61 PDFLNGEDKEIFDNVNSEFNVALKNLKKASDLDPNDYDIFFGSAGHGTLFDYPNAKDLQK 120 PDFLNGEDKEIFDNVNSEFNVALKNLKKASDLDPNDYDIFFGSAGHGTLFDYPNAKDLQK Sbjct: 64 PDFLNGEDKEIFDNVNSEFNVALKNLKKASDLDPNDYDIFFGSAGHGTLFDYPNAKDLQK 123 Query: 121 IATTVYDKGGVVSAVCHGPAIFENLNDPKTGEPLIKGKKITGFTDIGEDILGVTDIMKKG 180 IATTVYDKGGVVSAVCHGPAIFENLNDPKTGEPLIKGKKITGFTDIGEDILGVTDIMKKG Sbjct: 124 IATTVYDKGGVVSAVCHGPAIFENLNDPKTGEPLIKGKKITGFTDIGEDILGVTDIMKKG 183 Query: 181 NLLTIKQVAEKEGATYIEPEGPWDNFTVTDGRIVTGVNPQSAVKTAEDVIAAFECN 236 NLLTIKQVAEKEGATYIEPEGPWDNFTVTDGRIVTGVNPQSAVKTAEDVIAAFECN Sbjct: 184 NLLTIKQVAEKEGATYIEPEGPWDNFTVTDGRIVTGVNPQSAVKTAEDVIAAFECN 239 >1QVW-A nrPDB Length = 237 Score = 345 bits (884), Expect = 1e-95, Method: Composition-based stats. Identities = 144/232 (62%), Positives = 178/232 (76%) Query: 3 KVLLALTSYNETFYSDGKKTGVFVVEALHPFEVFRKKGYEIQLASETGTFGWDDHSVVPD 62 KVLLALTSYN+ FYSDG KTGVFVVEALHPF FRK+G+E+ SETG FGWD+HS+ D Sbjct: 5 KVLLALTSYNDVFYSDGMKTGVFVVEALHPFNTFRKEGFEVDFVSETGKFGWDEHSLAKD 64 Query: 63 FLNGEDKEIFDNVNSEFNVALKNLKKASDLDPNDYDIFFGSAGHGTLFDYPNAKDLQKIA 122 FLNG+D+ F N +S+FN L +K +++ +DY IF SAGHGTLFDYP AKDLQ IA Sbjct: 65 FLNGQDETDFKNKDSDFNKTLAKIKTPKEVNADDYQIFMASAGHGTLFDYPKAKDLQDIA 124 Query: 123 TTVYDKGGVVSAVCHGPAIFENLNDPKTGEPLIKGKKITGFTDIGEDILGVTDIMKKGNL 182 + +Y GGVV+AVCHGPA+F+ L D KTG PLI+GK ITGFTD+GE I+GV I+K NL Sbjct: 125 SEIYANGGVVAAVCHGPAMFDGLTDKKTGRPLIEGKSITGFTDVGETIMGVDSILKAKNL 184 Query: 183 LTIKQVAEKEGATYIEPEGPWDNFTVTDGRIVTGVNPQSAVKTAEDVIAAFE 234 T++ VA+K GA Y+ P GPWD++++TDGR+VTGVNP SA TA I A + Sbjct: 185 ATVEDVAKKYGAKYLAPVGPWDDYSITDGRLVTGVNPASAHSTAVRSIDALK 236 >3KKL-A nrPDB Length = 244 Score = 340 bits (871), Expect = 3e-94, Method: Composition-based stats. Identities = 120/231 (51%), Positives = 160/231 (69%) Query: 3 KVLLALTSYNETFYSDGKKTGVFVVEALHPFEVFRKKGYEIQLASETGTFGWDDHSVVPD 62 + L++LTSY+ FY DG KTGVFVVE L F+ F K G+E+ SETG FGWD+H + Sbjct: 5 RALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSETGGFGWDEHYLPKS 64 Query: 63 FLNGEDKEIFDNVNSEFNVALKNLKKASDLDPNDYDIFFGSAGHGTLFDYPNAKDLQKIA 122 F+ GEDK F+ NS FN AL +K A++++ +DY +FF SAGHG LFDYP AK+LQ IA Sbjct: 65 FIGGEDKMNFETKNSAFNKALARIKTANEVNASDYKVFFASAGHGALFDYPKAKNLQDIA 124 Query: 123 TTVYDKGGVVSAVCHGPAIFENLNDPKTGEPLIKGKKITGFTDIGEDILGVTDIMKKGNL 182 + +Y GGV++A+CHGP +F+ L D KT PLI+GK ITGF GE LGV DI++ L Sbjct: 125 SKIYANGGVIAAICHGPLLFDGLIDIKTTRPLIEGKAITGFPLEGEIALGVDDILRSRKL 184 Query: 183 LTIKQVAEKEGATYIEPEGPWDNFTVTDGRIVTGVNPQSAVKTAEDVIAAF 233 T+++VA K GA Y+ P PWD++++TDG++VTGVN S+ T I A Sbjct: 185 TTVERVANKNGAKYLAPIHPWDDYSITDGKLVTGVNANSSYSTTIRAINAL 235 >5JZM-A nrPDB Length = 288 Score = 173 bits (437), Expect = 8e-44, Method: Composition-based stats. Identities = 44/163 (26%), Positives = 76/163 (46%), Gaps = 19/163 (11%) Query: 12 NETFYSDGKKTGVFVVEALHPFEVFRKKGYEIQLASETGTFGWDDHSVVPDFLNGEDKEI 71 N TF+S TG VE L P K G+ +A+ +G + +P ED+E+ Sbjct: 69 NGTFFS----TGNHPVETLLPMYHLDKAGFSFDIATLSGNPVKFEWWAMPR----EDQEV 120 Query: 72 FDNVNSEFNVALKNLKKASDL------DPNDYDIFFGSAGHGTLFDYPNAKDLQKIATTV 125 + + S++ + + K SD+ + +DY F GHG L P++++++ + Sbjct: 121 -NGLYSKYQSSFRQPLKLSDVIETALGEDSDYIGVFIPGGHGALMGLPDSQEVKAVLQWA 179 Query: 126 YDKGGVVSAVCHGPAIFENLNDPKTGEPLIKGKKITGFTDIGE 168 + + ++CHGPA F + D +PL G KI F D + Sbjct: 180 MKQNKFIISLCHGPAAFLAVGD----DPLFAGYKIVAFPDEMD 218 >1N57-A nrPDB Length = 291 Score = 168 bits (426), Expect = 1e-42, Method: Composition-based stats. Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 23/169 (13%) Query: 8 LTSYNETFYSDGKKTGVFVVEALHPFEVFRKKGYEIQLASETGTFGWDDHSVVPDFLNGE 67 L + N +S TG +E L P G+E ++A+ +G ++ +P + Sbjct: 61 LPTDNGKLFS----TGNHPIETLLPLYHLHAAGFEFEVATISGLMTKFEYWAMPH----K 112 Query: 68 DKEI---FDNVNSEFNVALKNLKKASDL-----DPNDYDIFFGSAGHGTLFDYPNAKDLQ 119 D+++ F+ S F +N KK +D+ ++Y F GHG L P ++D+ Sbjct: 113 DEKVMPFFEQHKSLF----RNPKKLADVVASLNADSEYAAIFVPGGHGALIGLPESQDVA 168 Query: 120 KIATTVYDKGGVVSAVCHGPAIFENLNDPKTGEPLIKGKKITGFTDIGE 168 V ++CHGPA F L + G+ + G I F D + Sbjct: 169 AALQWAIKNDRFVISLCHGPAAFLAL---RHGDNPLNGYSICAFPDAAD 214 >5XR3-A nrPDB Length = 300 Score = 129 bits (325), Expect = 9e-31, Method: Composition-based stats. Identities = 47/232 (20%), Positives = 92/232 (39%), Gaps = 25/232 (10%) Query: 12 NETFYSDGKKTGVFVVEALHPFEVFRKKGYEIQLASETGTFGWDDHSVVPDFLNGEDKEI 71 N +S TG VE L P + G+++ +A+ +G + +P ED+ + Sbjct: 69 NGKMFS----TGNHPVEMLLPLHHLMEAGFDVDVATLSGYPVKLELWAMP----TEDEAV 120 Query: 72 FDNVNSEFNVALKNLKKASDL------DPNDYDIFFGSAGHGTLFDYPNAKDLQKIATTV 125 N + LK KK +D+ +DY F GH + ++D+Q+ Sbjct: 121 ISTYN-KLKEKLKQPKKLADVIKNELGPDSDYLSVFIPGGHAAVVGISESEDVQQTLDWA 179 Query: 126 YDKGGVVSAVCHGPAIFENLNDPKTGEPLIKGKKITGFTDIGEDILGVTDIMKKGNLL-T 184 D + + HGPA + + PL +G + F D ++ + G L Sbjct: 180 LDNDRFIVTLXHGPAALLSAGLNREKSPL-EGYSVCVFPDSLDEGANIEIGYLPGRLKWL 238 Query: 185 IKQVAEKEGATYIEPEGPWDNF---TVTDGRIVTGVNPQSAVKTAEDVIAAF 233 + + K+G + D+ T+ D +++TG +P ++ + + + Sbjct: 239 VADLLTKQGLKVVN-----DDMTGRTLKDRKLLTGDSPLASNELGKLAVNEM 285 >1G2I-A nrPDB Length = 166 Score = 117 bits (293), Expect = 4e-27, Method: Composition-based stats. Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 34/147 (23%) Query: 27 VEALHPFEVFRKKGYEIQLAS-ETGTF-GWDDHSVVPDFLNGEDKEIFDNVNSEFNVALK 84 VE ++P+ +++G+E+ +AS E GT G +SV D FD VN Sbjct: 14 VELIYPYHRLKEEGHEVYIASFERGTITGKHGYSVKVDL-------TFDKVN-------- 58 Query: 85 NLKKASDLDPNDYDIFFGSAGHGTLFDYPNAKDLQKIATTVYDKGGVVSAVCHGPAIFEN 144 P ++D G N K + IA ++ +G V+++CHGP I + Sbjct: 59 ---------PEEFDALVLPGGRAPERVRLNEKAVS-IARKMFSEGKPVASICHGPQILIS 108 Query: 145 LNDPKTGEPLIKGKKITGFTDIGEDIL 171 +++G+K T + I +D++ Sbjct: 109 AG-------VLRGRKGTSYPGIKDDMI 128 >3L18-A nrPDB Length = 168 Score = 91.0 bits (224), Expect = 4e-19, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 61/151 (40%), Gaps = 34/151 (22%) Query: 23 GVFVVEALHPFEVFRKKGYEIQLAS-ETGTF-GWDDHSVVPDFLNGEDKEIFDNVNSEFN 80 G +E ++P +++G+E+ +AS + G G +SV D Sbjct: 12 GFEDLELIYPLHRIKEEGHEVYVASFQRGKITGKHGYSVNVDL----------------- 54 Query: 81 VALKNLKKASDLDPNDYDIFFGSAGHGTLFDYPNAKDLQKIATTVYDKGGVVSAVCHGPA 140 ++DP+++D G N K + I +++ V+++CHGP Sbjct: 55 -------TFEEVDPDEFDALVLPGGKAPEIVRLNEKAVM-ITRRMFEDDKPVASICHGPQ 106 Query: 141 IFENLNDPKTGEPLIKGKKITGFTDIGEDIL 171 I + ++KG++ T I +D++ Sbjct: 107 ILISA-------KVLKGRRGTSTITIRDDVI 130 >4OFW-A nrPDB Length = 387 Score = 67.1 bits (162), Expect = 5e-12, Method: Composition-based stats. Identities = 37/190 (19%), Positives = 63/190 (33%), Gaps = 37/190 (19%) Query: 28 EALHPFEVFRKKGYEIQLASETGTFGWDDHSVVPDFLNGEDKEIFDNVNSEFNVALKNLK 87 E PF+ + G ++ G + + DF + + + Sbjct: 210 EVKVPFQSLQALGCQVDAVCPEKKAGERCPTAIHDFEGDQ------TYSEKPGHTFALTT 263 Query: 88 KASDLDPNDYDIFFGSAGHGTLFDYPNAKDLQKIATTVYDKGGVVSAVCHGPAIFENLND 147 DL + YD G + N + I + V+++CHG I Sbjct: 264 NFDDLVSSSYDALVIPGGRAPEYLALNEH-VLNIVKEFMNSEKPVASICHGQQILAAAG- 321 Query: 148 PKTGEPLIKGKKITGFTDIG-EDILGVTDIMKKGNLLTIKQVAEKEGATYIEPEGPWDNF 206 ++KG+K T + + +LG G T++EP+ P D Sbjct: 322 ------VLKGRKCTAYPAVKLNVVLG--------------------GGTWLEPD-PIDR- 353 Query: 207 TVTDGRIVTG 216 TDG +VTG Sbjct: 354 CFTDGNLVTG 363 Score = 67.1 bits (162), Expect = 6e-12, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 62/189 (32%), Gaps = 35/189 (18%) Query: 28 EALHPFEVFRKKGYEIQLASETGTFGWDDHSVVPDFLNGEDKEIFDNVNSEFNVALKNLK 87 E + PF+ + G + G + V DF + N N Sbjct: 17 EVMVPFQALQAFGITVHTVCPGKKAGDSCPTAVHDFCGHQTYFESRGHNFTLNATF---- 72 Query: 88 KASDLDPNDYDIFFGSAGHGTLFDYPNAKDLQKIATTVYDKGGVVSAVCHGPAIFENLND 147 ++D + YD G + A + ++ G ++++CHG I + Sbjct: 73 --DEVDLSKYDGLVIPGGRAPEYLALTA-SVVELVKEFSRSGKPIASICHGQLILAAADT 129 Query: 148 PKTGEPLIKGKKITGFTDIGEDILGVTDIMKKGNLLTIKQVAEKEGATYIEPEGPWDNFT 207 + G+K T + +G ++ GA ++EP P + Sbjct: 130 -------VNGRKCTAYATVGPSLVAA-------------------GAKWVEPITP--DVC 161 Query: 208 VTDGRIVTG 216 V DG ++T Sbjct: 162 VVDGSLITA 170 >1OI4-A nrPDB Length = 193 Score = 54.0 bits (128), Expect = 6e-08, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 48/135 (35%), Gaps = 28/135 (20%) Query: 28 EALHPFEVFRKKGYEIQLASETGTFGWDDHSVVPDFLNGEDKEIFDNVNSEFNVALKNLK 87 E P + FRK G+E+ + + E +V + K Sbjct: 38 EFTSPADEFRKAGHEVITIEKQAG------------------KTVKGKKGEASVTID--K 77 Query: 88 KASDLDPNDYDIFFGSAGHGTLFDYPNAKDLQKIATTVYDKGGVVSAVCHGPAIFENLND 147 ++ P ++D GH + + + + + G V A+CHGP + + Sbjct: 78 SIDEVTPAEFDALLLPGGHSPDYLRGDNRFVT-FTRDFVNSGKPVFAICHGPQLLISA-- 134 Query: 148 PKTGEPLIKGKKITG 162 +I+G+K+T Sbjct: 135 -----DVIRGRKLTA 144 >1PDW-A nrPDB Length = 197 Score = 50.2 bits (118), Expect = 7e-07, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 69/211 (32%), Gaps = 51/211 (24%) Query: 23 GVFVVEALHPFEVFRKKGYEIQLASETGTFGWDDHSVVPDFLNGEDKEIFDNVNSEFNVA 82 G +E + P +V R+ G ++ +A G G D D + D + D Sbjct: 13 GAEEMETVIPVDVMRRAGIKVTVA---GLAGKDPVQCSRDVVICPDASLEDAKK------ 63 Query: 83 LKNLKKASDLDPNDYDIFFGSAGHGTLFDYPNAKDLQKIATTVYDKGGVVSAVCHGPAIF 142 YD+ G+ + + +++I ++ G+++A+C GP Sbjct: 64 -----------EGPYDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIAAICAGPTAL 112 Query: 143 ENLNDPKTGEPLIKGKKITGFTDIGEDILGVTDIMKKGNLLTIKQVAEKEGATYIEPEGP 202 + G K+T + ++ G Y E Sbjct: 113 LA-------HEIGFGSKVTTHPLAKDKMM--------------------NGGHYTYSE-- 143 Query: 203 WDNFTVTDGRIVTGVNPQSAVKTAEDVIAAF 233 N DG I+T P ++ + A ++ A Sbjct: 144 --NRVEKDGLILTSRGPGTSFEFALAIVEAL 172 >4E08-A nrPDB Length = 190 Score = 48.2 bits (113), Expect = 3e-06, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 62/168 (36%), Gaps = 34/168 (20%) Query: 23 GVFVVEALHPFEVFRKKGYEIQLASETGTFGWDDHSVVPDFLNGEDKEIFDNVNSEFNVA 82 G +E + +V R+ G ++ +A G + V +V Sbjct: 15 GAEEMEFIIAADVLRRAGIKVTVAGLNGG---------------------EAVKCSRDVQ 53 Query: 83 LKNLKKASDLDPNDYDIFFGSAGHGTLFDYPNAKDLQKIATTVYDKGGVVSAVCHGPAIF 142 + + + + +D+ G G + + + + GG+++A+C P + Sbjct: 54 ILPDTSLAQVASDKFDVVVLPGGLGGSNAMGESSLVGDLLRSQESGGGLIAAICAAPTVL 113 Query: 143 ENLNDPKTGEPLIKGKKITGFTDIGEDILG----VTD--IMKKGNLLT 184 K G + GK +T + + ++ V D ++K GNL+T Sbjct: 114 -----AKHG--VASGKSLTSYPSMKPQLVNNYSYVDDKTVVKDGNLIT 154 >2VRN-A nrPDB Length = 190 Score = 43.6 bits (101), Expect = 7e-05, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 40/117 (34%), Gaps = 17/117 (14%) Query: 23 GVFVVEALHPFEVFRKKGYEIQLASETGTFGWDDHSVVPDFLNGEDKEIFDNVNSEFNVA 82 GV +E P G +L S + + + ++K D+V Sbjct: 19 GVEEIELTSPRAAIEAAGGTTELISLEPG----EIQSMKGDIEPQEKYRVDHV------- 67 Query: 83 LKNLKKASDLDPNDYDIFFGSAGHGTLFDYPNAKDLQKIATTVYDKGGVVSAVCHGP 139 S++ +DYD G + K +YD G ++A+CHGP Sbjct: 68 ------VSEVQVSDYDGLLLPGGTVNPDKLRLEEGAMKFVRDMYDAGKPIAAICHGP 118 >5SY4-A nrPDB Length = 199 Score = 40.1 bits (92), Expect = 0.001, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 31/82 (37%), Gaps = 6/82 (7%) Query: 89 ASDLDPNDYDIFFGSAGHGTLFDYPNAKDLQKIATTVYDKGGVVSAVCHGPAIFENLNDP 148 ++ +YD+ G + ++ L + + G +V+A+C PA +D Sbjct: 62 LVEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDI 121 Query: 149 KTGEPLIKGKKITGFTDIGEDI 170 + TGF + + I Sbjct: 122 FPIGNM------TGFPTLKDKI 137 >1OY1-A nrPDB Length = 228 Score = 37.4 bits (85), Expect = 0.005, Method: Composition-based stats. Identities = 14/99 (14%), Positives = 33/99 (33%), Gaps = 10/99 (10%) Query: 59 VVPDFLNGEDKEIFDNVNSEFNVALKNLKKASDLDPNDYDIFFGSAGHGTLFDYPN---- 114 V+ E + + + ++ + D + D G G + N Sbjct: 51 VINHLTGEAMTETRNVLIEAARITRGEIRPLAQADAAELDALIVPGGFGAAKNLSNFASL 110 Query: 115 ------AKDLQKIATTVYDKGGVVSAVCHGPAIFENLND 147 ++L+ +A ++ G + +C PA+ + D Sbjct: 111 GSECTVDRELKALAQAMHQAGKPLGFMCIAPAMLPKIFD 149 >3OT1-B nrPDB Length = 208 Score = 37.4 bits (85), Expect = 0.005, Method: Composition-based stats. Identities = 17/122 (13%), Positives = 37/122 (30%), Gaps = 21/122 (17%) Query: 23 GVFVVEALHPFEVFRKKGYEIQLASETGTFGWDDHSVVPDFLNGEDKEIFDNVNSEFNVA 82 G +E + + + G+++ +A+ V V Sbjct: 19 GSEEMETVIIVDTLVRAGFQVTMAAVGDKL---------------------QVQGSRGVW 57 Query: 83 LKNLKKASDLDPNDYDIFFGSAGHGTLFDYPNAKDLQKIATTVYDKGGVVSAVCHGPAIF 142 L + +D G G + ++ L + +G +V+A+C PA+ Sbjct: 58 LTAEQTLEACSAEAFDALALPGGVGGAQAFADSTALLALIDAFSQQGKLVAAICATPALV 117 Query: 143 EN 144 Sbjct: 118 FA 119 >3MGK-A nrPDB Length = 211 Score = 37.1 bits (84), Expect = 0.007, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 34/94 (36%), Gaps = 3/94 (3%) Query: 98 DIFFGSAGHGTLFDYPNAKDLQKIATTVYDKGGVVSAVCHGPAIFENLNDPKTGEPLIKG 157 I F G GT + N + + + + +VC G A+ Sbjct: 67 KILFVPGGSGT-REKVNDDNFINFIGNMVKESKYIISVCTGSALLSKAGILNGKRATTNK 125 Query: 158 KKITGFTDIGEDILGVTDI--MKKGNLLTIKQVA 189 + T+ ED+L V + +K GN+ T V+ Sbjct: 126 RSFKWVTEQNEDVLWVKEARWVKDGNIYTSSGVS 159 >5OF3-B nrPDB Length = 307 Score = 31.3 bits (69), Expect = 0.34, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 4/42 (9%) Query: 160 ITGFTDIGEDILGVTDIMKKGNLLTIKQVAEKE----GATYI 197 IT + DIG+ + G+ IMKK N+ ++ + K G YI Sbjct: 235 ITFYIDIGKGLSGIVSIMKKYNVSNVEDLYRKYRGDKGTRYI 276 >4GE0-A nrPDB Length = 194 Score = 31.3 bits (69), Expect = 0.37, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 30/83 (36%), Gaps = 5/83 (6%) Query: 80 NVALKNLKKASDLDPNDYDIFFGSAGHGTLFDYPNAKDLQKIATTVYDK-GGVVSAVCHG 138 N + K + A D YDI G +Q++ Y K + +C G Sbjct: 58 NRSYKEIPSADDF-AKQYDIAIIPGGGLGAKTLSTTPFVQQVVKEFYKKPNKWIGMICAG 116 Query: 139 PAIFENLNDPK---TGEPLIKGK 158 P + P TG P ++G+ Sbjct: 117 PLTAKTSGLPNKQITGHPSVRGQ 139 >6FBA-A nrPDB Length = 349 Score = 30.5 bits (67), Expect = 0.61, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 32/91 (35%), Gaps = 3/91 (3%) Query: 6 LALTSYNETFYSDGKKTGVFVVEALHPFEVFRKKGYEIQLASETGTFGWDDHSVVPDFLN 65 +A++S ++ + G TG ++L F + + + V D N Sbjct: 132 IAVSSSSKPIINAGNGTGEHPTQSLLDFYTIHNY---FPFILDRNINKKLNIAFVGDLKN 188 Query: 66 GEDKEIFDNVNSEFNVALKNLKKASDLDPND 96 G + S +NV+ + S P D Sbjct: 189 GRTVHSLSKLLSRYNVSFNFVSCKSLNIPKD 219 >5LD2-D nrPDB Length = 609 Score = 29.4 bits (64), Expect = 1.6, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 29/75 (38%), Gaps = 2/75 (2%) Query: 75 VNSEFNVALKNLKKASDLDPNDYDIFF--GSAGHGTLFDYPNAKDLQKIATTVYDKGGVV 132 V + F +++K DY AG+G D A+ + +++ ++ Sbjct: 383 VKTVFQQDFTDIEKRLLQSGEDYIAMLEEALAGYGRYLDLLQARAEPDLIIQAFNEYQLL 442 Query: 133 SAVCHGPAIFENLND 147 A+ GP LN+ Sbjct: 443 CALREGPFGVAGLNE 457 >6BT9-A nrPDB Length = 672 Score = 29.4 bits (64), Expect = 1.6, Method: Composition-based stats. Identities = 36/165 (21%), Positives = 62/165 (37%), Gaps = 21/165 (12%) Query: 67 EDKEIFDNVNSEFNVALKNLKKASDLDPNDYDIFFGSAGHGTLFDYPNAKDLQKIATTV- 125 EDK+ F + + AL KA D Y + S D+ K + +I + Sbjct: 222 EDKQNFTLLLQDVRNAL---NKAGAEDGKQYLLTIASGASQRYADHTELKKISQILDWIN 278 Query: 126 ---YD-KGGVVSAVCHGPAIFENLNDPKTGEPLIKGKKITGFTDIG----EDILGVTDIM 177 YD GG + H A++++ NDP I +T+ G + +LGV Sbjct: 279 IMTYDFHGGWEATSNHNAALYKDPNDPAANTNFYVDGAINVYTNEGVPVDKLVLGVPFYG 338 Query: 178 KKGNLLTIKQVAEKEGAT-----YIEPEGPWDNFTVTDGRIVTGV 217 + + + + + +G WD+++ D TGV Sbjct: 339 RGWKSCGKENNGQYQPCKPGSDGKLASKGTWDDYSTGD----TGV 379 >2NSM-A nrPDB Length = 439 Score = 27.8 bits (60), Expect = 4.5, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 3/73 (4%) Query: 102 GSAGHGTLFDYPNAK---DLQKIATTVYDKGGVVSAVCHGPAIFENLNDPKTGEPLIKGK 158 G H L D ++ + + + ++ V+SA HG A+ N K+ E ++G Sbjct: 159 GPNHHLPLPDNWKSQVEPETRAVIRWMHSFNFVLSANLHGGAVVANYPYDKSFEHRVRGV 218 Query: 159 KITGFTDIGEDIL 171 + T T +D L Sbjct: 219 RRTASTPTPDDKL 231 >6AN0-A nrPDB Length = 447 Score = 27.4 bits (59), Expect = 6.1, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 42/142 (29%), Gaps = 21/142 (14%) Query: 91 DLDPNDYDIFFGSAGHGTLFDYPNAKDLQKIATTVYDKGGVVSAVCHGPAIFENLNDPKT 150 + P + + G LF + + G +C P N+N Sbjct: 122 EARPIENIGIYIPGGSAPLF-----STVLMLGIPAQLAGCKNITLCTPPDESGNINPAIL 176 Query: 151 GEPLIKG----KKITGFTDIGEDILGVTDIMKKGNL--------LTIKQVAEKEGATYIE 198 + G K G IG G I K + KQ+A+ G Sbjct: 177 YTANLIGIKNIYKAGGIQAIGAMTFGTETIEKADKIFGPGNQYVTAAKQIAQNFGVAIDM 236 Query: 199 PEGPWDNFTVTDGRIVTGVNPQ 220 P GP + + D T NP+ Sbjct: 237 PAGPSEVLVIAD----TTANPE 254 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.312 0.126 0.330 Lambda K H 0.267 0.0383 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8,601,023 Number of Sequences: 36641 Number of extensions: 337290 Number of successful extensions: 812 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 32 Number of HSP's successfully gapped in prelim test: 24 Number of HSP's that attempted gapping in prelim test: 762 Number of HSP's gapped (non-prelim): 59 length of query: 236 length of database: 10,336,785 effective HSP length: 94 effective length of query: 142 effective length of database: 6,892,531 effective search space: 978739402 effective search space used: 978739402 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 57 (26.7 bits)