BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q570C0 (594 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 2P1O-B nrPDB 1221 0.0 3OGM-B nrPDB 313 2e-85 3VFC-A nrPDB 32 0.79 3RG1-A nrPDB 32 0.79 4I6J-B nrPDB 32 0.90 4CVS-A nrPDB 30 2.9 5HZG-B nrPDB 30 3.9 6BRO-B nrPDB 30 4.0 4XGC-C nrPDB 29 4.9 >2P1O-B nrPDB Length = 594 Score = 1221 bits (3159), Expect = 0.0, Method: Compositional matrix adjust. Identities = 594/594 (100%), Positives = 594/594 (100%) Query: 1 MQKRIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEIERWCRRKVFIGNCYAVSPAT 60 MQKRIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEIERWCRRKVFIGNCYAVSPAT Sbjct: 1 MQKRIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEIERWCRRKVFIGNCYAVSPAT 60 Query: 61 VIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDD 120 VIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDD Sbjct: 61 VIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDD 120 Query: 121 CLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFP 180 CLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFP Sbjct: 121 CLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFP 180 Query: 181 DTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEEL 240 DTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEEL Sbjct: 181 DTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEEL 240 Query: 241 GTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYAT 300 GTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYAT Sbjct: 241 GTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYAT 300 Query: 301 VQSYDLVKLLCQCPKLQRLWVLDYIEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALT 360 VQSYDLVKLLCQCPKLQRLWVLDYIEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALT Sbjct: 301 VQSYDLVKLLCQCPKLQRLWVLDYIEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALT 360 Query: 361 EQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPL 420 EQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPL Sbjct: 361 EQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPL 420 Query: 421 DIGFGAIVEHCKDLRRLSLSGLLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGC 480 DIGFGAIVEHCKDLRRLSLSGLLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGC Sbjct: 421 DIGFGAIVEHCKDLRRLSLSGLLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGC 480 Query: 481 DSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDE 540 DSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDE Sbjct: 481 DSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDE 540 Query: 541 RGAPDSRPESCPVERVFIYRTVAGPRFDMPGFVWNMDQDSTMRFSRQIITTNGL 594 RGAPDSRPESCPVERVFIYRTVAGPRFDMPGFVWNMDQDSTMRFSRQIITTNGL Sbjct: 541 RGAPDSRPESCPVERVFIYRTVAGPRFDMPGFVWNMDQDSTMRFSRQIITTNGL 594 >3OGM-B nrPDB Length = 592 Score = 313 bits (801), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 189/576 (32%), Positives = 306/576 (53%), Gaps = 21/576 (3%) Query: 11 EEVLEHVFSFIQLDKDRNSVSLVCKSWYEIERWCRRKVFIGNCYAVSPATVIRRFPKVRS 70 ++V+E V ++I KDR+S SLVC+ W++I+ R V + CY +P + RRFP +RS Sbjct: 18 DDVIEQVMTYITDPKDRDSASLVCRRWFKIDSETREHVTMALCYTATPDRLSRRFPNLRS 77 Query: 71 VELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKS-F 129 ++LKGKP A FNL+P+ WGGYV PW+ +S++ L+ + +RM+V+D L+ +AK+ Sbjct: 78 LKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARA 137 Query: 130 KNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSL 189 + + L L C GF+TDGL +I CR +K L + ES + G WL TSL L Sbjct: 138 DDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVL 197 Query: 190 NISCLA-SEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAE 248 N +++S LE + C +L S+K+ LE L + A LEE G + Sbjct: 198 NFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNED 256 Query: 249 V-RPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLV 307 + P+ Y L C+ G P +P ++ +++ L+L YA +++ D Sbjct: 257 IGMPEKYMNLVFPRKLCR-----LGLSYMGPNEMPILFPFAAQIRKLDLLYALLETEDHC 311 Query: 308 KLLCQCPKLQRLWVLDYIEDAGLEVLASTCKDLRELRV--FPSEPFVMEPNVALTEQGLV 365 L+ +CP L+ L + I D GLEVLA CK L+ LR+ E + + ++++GL+ Sbjct: 312 TLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLI 371 Query: 366 SVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFG 425 +++ GC +LE + + +TN +L +I N+ FRL +++ + + +T PLD G Sbjct: 372 ALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDRE--ERITDLPLDNGVR 429 Query: 426 AIVEHCKDLRRLSL---SGLLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDS 482 +++ CK LRR + G LTD YIG Y+ + + + + G+SD G+ GC + Sbjct: 430 SLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPN 489 Query: 483 LRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERG 542 L+KLE+R C F ++A+ A +KL ++R LW+ S L+ P N+E+I R Sbjct: 490 LQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSRR 549 Query: 543 APDSRPESCPVE-----RVFIYRTVAGPRFDMPGFV 573 P+ + E + Y ++AG R D P V Sbjct: 550 VPEVNQQGEIREMEHPAHILAYYSLAGQRTDCPTTV 585 >3VFC-A nrPDB Length = 445 Score = 32.0 bits (71), Expect = 0.79, Method: Compositional matrix adjust. Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 5/65 (7%) Query: 345 VFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNA--ALITIARNRPNMTRF 402 FP P ++PN A T Q V V+ G LE VL + T + +A P Sbjct: 235 AFPDHPLRLDPNAAWTPQTSVKVAAG---LEGVLEYLEDPTPGLDGMAEVAAQAPMPLAT 291 Query: 403 RLCII 407 +C++ Sbjct: 292 NMCVV 296 >3RG1-A nrPDB Length = 612 Score = 32.0 bits (71), Expect = 0.79, Method: Compositional matrix adjust. Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Query: 132 FKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNI 191 ++L+LSSC S D A RN+ LDL + + S LSH Y ++ S NI Sbjct: 477 LEILILSSCNLLSIDQQAFHG--LRNVNHLDLSHNSLTGDSMDALSHLKGLYLNMASNNI 534 >4I6J-B nrPDB Length = 428 Score = 31.6 bits (70), Expect = 0.90, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 107 LEEIRLKRMVVTDDCLE-LIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDL 163 L +++ V D L+ L+A + K+L +SSC S G+ +A C L+EL L Sbjct: 174 LSSLKIDDTPVDDPSLKVLVANNSDTLKLLKMSSCPHVSPAGILCVADQCHGLRELAL 231 >4CVS-A nrPDB Length = 159 Score = 30.0 bits (66), Expect = 2.9, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 27/52 (51%) Query: 230 LLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYL 281 L+ P L++LG +V + S L++ L G K LR G+ D+V Y+ Sbjct: 65 FLEGLPNLQDLGKLNIGEDVEEMLRSDLALELDGAKNLREAIGYADSVRDYV 116 >5HZG-B nrPDB Length = 740 Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust. Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 5/73 (6%) Query: 148 LAAIAATCRNLKELDLRESD--VDDVSGHWLSHFPDTYTSLVSLNISCLASEVSF--SAL 203 L + TC L+ELDL E +DV +H P +L L++ A+ F S L Sbjct: 211 LEPLLETCAALRELDLSEFYCWTEDVVRALTTH-PSATAALTHLDLGLAAATDGFKSSEL 269 Query: 204 ERLVTRCPNLKSL 216 + CPNL+ L Sbjct: 270 GPIAASCPNLRKL 282 >6BRO-B nrPDB Length = 688 Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust. Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 5/73 (6%) Query: 148 LAAIAATCRNLKELDLRESD--VDDVSGHWLSHFPDTYTSLVSLNISCLASEVSF--SAL 203 L + TC L+ELDL E +DV +H P +L L++ A+ F S L Sbjct: 191 LEPLLETCAALRELDLSEFYCWTEDVVRALTTH-PSATAALTHLDLGLAAATDGFKSSEL 249 Query: 204 ERLVTRCPNLKSL 216 + CPNL+ L Sbjct: 250 GPIAASCPNLRKL 262 >4XGC-C nrPDB Length = 676 Score = 29.3 bits (64), Expect = 4.9, Method: Compositional matrix adjust. Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 9/69 (13%) Query: 348 SEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCII 407 +E F++E +A E G ++ PKLE++ ++ A + TI PN TR Sbjct: 425 TEQFLVE-EIAPLELGEACTAVLRPKLEAIRLAVDEVVKATMATITTTSPNETR------ 477 Query: 408 EPKAPDYLT 416 +A D+LT Sbjct: 478 --QATDHLT 484 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 2P1O-B nrPDB 1008 0.0 3OGM-B nrPDB 885 0.0 Sequences not found previously or not previously below threshold: 5HZG-B nrPDB 40 0.002 6BRO-B nrPDB 39 0.006 4I6J-B nrPDB 35 0.13 4CVS-A nrPDB 31 1.2 2CA6-A nrPDB 30 2.8 3IP8-A nrPDB 30 3.6 5BV3-A nrPDB 30 3.6 1OAH-A nrPDB 30 3.8 3VFC-A nrPDB 29 4.6 1SMS-A nrPDB 29 6.7 2Q4G-W nrPDB 29 6.8 3G06-A nrPDB 28 7.8 2H5G-A nrPDB 28 8.3 4V3P-LD nrPDB 28 9.4 CONVERGED! >2P1O-B nrPDB Length = 594 Score = 1008 bits (2607), Expect = 0.0, Method: Composition-based stats. Identities = 594/594 (100%), Positives = 594/594 (100%) Query: 1 MQKRIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEIERWCRRKVFIGNCYAVSPAT 60 MQKRIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEIERWCRRKVFIGNCYAVSPAT Sbjct: 1 MQKRIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEIERWCRRKVFIGNCYAVSPAT 60 Query: 61 VIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDD 120 VIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDD Sbjct: 61 VIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDD 120 Query: 121 CLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFP 180 CLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFP Sbjct: 121 CLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFP 180 Query: 181 DTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEEL 240 DTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEEL Sbjct: 181 DTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEEL 240 Query: 241 GTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYAT 300 GTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYAT Sbjct: 241 GTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYAT 300 Query: 301 VQSYDLVKLLCQCPKLQRLWVLDYIEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALT 360 VQSYDLVKLLCQCPKLQRLWVLDYIEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALT Sbjct: 301 VQSYDLVKLLCQCPKLQRLWVLDYIEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALT 360 Query: 361 EQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPL 420 EQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPL Sbjct: 361 EQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPL 420 Query: 421 DIGFGAIVEHCKDLRRLSLSGLLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGC 480 DIGFGAIVEHCKDLRRLSLSGLLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGC Sbjct: 421 DIGFGAIVEHCKDLRRLSLSGLLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGC 480 Query: 481 DSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDE 540 DSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDE Sbjct: 481 DSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDE 540 Query: 541 RGAPDSRPESCPVERVFIYRTVAGPRFDMPGFVWNMDQDSTMRFSRQIITTNGL 594 RGAPDSRPESCPVERVFIYRTVAGPRFDMPGFVWNMDQDSTMRFSRQIITTNGL Sbjct: 541 RGAPDSRPESCPVERVFIYRTVAGPRFDMPGFVWNMDQDSTMRFSRQIITTNGL 594 >3OGM-B nrPDB Length = 592 Score = 885 bits (2287), Expect = 0.0, Method: Composition-based stats. Identities = 189/576 (32%), Positives = 306/576 (53%), Gaps = 21/576 (3%) Query: 11 EEVLEHVFSFIQLDKDRNSVSLVCKSWYEIERWCRRKVFIGNCYAVSPATVIRRFPKVRS 70 ++V+E V ++I KDR+S SLVC+ W++I+ R V + CY +P + RRFP +RS Sbjct: 18 DDVIEQVMTYITDPKDRDSASLVCRRWFKIDSETREHVTMALCYTATPDRLSRRFPNLRS 77 Query: 71 VELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKS-F 129 ++LKGKP A FNL+P+ WGGYV PW+ +S++ L+ + +RM+V+D L+ +AK+ Sbjct: 78 LKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARA 137 Query: 130 KNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSL 189 + + L L C GF+TDGL +I CR +K L + ES + G WL TSL L Sbjct: 138 DDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVL 197 Query: 190 NISCLA-SEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAE 248 N +++S LE + C +L S+K+ LE L + A LEE G + Sbjct: 198 NFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNED 256 Query: 249 V-RPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLV 307 + P+ Y L C+ G P +P ++ +++ L+L YA +++ D Sbjct: 257 IGMPEKYMNLVFPRKLCR-----LGLSYMGPNEMPILFPFAAQIRKLDLLYALLETEDHC 311 Query: 308 KLLCQCPKLQRLWVLDYIEDAGLEVLASTCKDLRELRV--FPSEPFVMEPNVALTEQGLV 365 L+ +CP L+ L + I D GLEVLA CK L+ LR+ E + + ++++GL+ Sbjct: 312 TLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLI 371 Query: 366 SVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFG 425 +++ GC +LE + + +TN +L +I N+ FRL +++ + + +T PLD G Sbjct: 372 ALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDRE--ERITDLPLDNGVR 429 Query: 426 AIVEHCKDLRRLSL---SGLLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDS 482 +++ CK LRR + G LTD YIG Y+ + + + + G+SD G+ GC + Sbjct: 430 SLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPN 489 Query: 483 LRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERG 542 L+KLE+R C F ++A+ A +KL ++R LW+ S L+ P N+E+I R Sbjct: 490 LQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSRR 549 Query: 543 APDSRPESCPVE-----RVFIYRTVAGPRFDMPGFV 573 P+ + E + Y ++AG R D P V Sbjct: 550 VPEVNQQGEIREMEHPAHILAYYSLAGQRTDCPTTV 585 >5HZG-B nrPDB Length = 740 Score = 40.4 bits (93), Expect = 0.002, Method: Composition-based stats. Identities = 72/391 (18%), Positives = 116/391 (29%), Gaps = 97/391 (24%) Query: 220 RAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPA 279 A +LA L P + L+ R W P Sbjct: 152 NAFIAARLAGCFPAVTSLAVYCRD-------PTTLANLT-PHWQASLRRVKLVRWHQRPP 203 Query: 280 YLP------AVYSVCSRLTTLNLSYATVQSYDLVKLL----------------------- 310 LP + C+ L L+LS + D+V+ L Sbjct: 204 TLPDGADLEPLLETCAALRELDLSEFYCWTEDVVRALTTHPSATAALTHLDLGLAAATDG 263 Query: 311 ----------CQCPKLQRL--------WVLDYIEDAGLEVLASTCKDLRELRVFPSEPF- 351 CP L++L D + D L LA++C L LR+ SEPF Sbjct: 264 FKSSELGPIAASCPNLRKLVAPCLFNPRFSDCVGDDALLSLATSCPRLTVLRL--SEPFE 321 Query: 352 ----VMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCII 407 + A+T GLV+ P LE F + + L + + Sbjct: 322 AAANIQREEAAITVAGLVAFFAALPALED---FTMDLQHNVLEAAPA---------MEAL 369 Query: 408 EPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSGLLTDKVFEYIGTYAKKMEMLSVAFAG 467 + P + L G L +++ G L Y K + L Sbjct: 370 ARRCP-RIKFLTLGSFQGLCKASWLHLDGVAVCGGLESL-------YMKNCQDL------ 415 Query: 468 DSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKL-----ETMRSLWMSSCSVSFGA 522 +D + + GC L K I C D A +L T++ + + C + A Sbjct: 416 -TDASLAAIGRGCRRLAKFGIHGC---DLVTSAGIRRLAFTLRPTLKEVTVLHCRLLHTA 471 Query: 523 CKLLGQKMPKLNVEVIDERGAPDSRPESCPV 553 L + +E ++ ++ + C V Sbjct: 472 ECLTALSPIRDRIESLEINCVWNTTEQPCSV 502 Score = 34.6 bits (78), Expect = 0.12, Method: Composition-based stats. Identities = 92/433 (21%), Positives = 152/433 (35%), Gaps = 74/433 (17%) Query: 7 LSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEIERWCRRKVFIGNCYAVSPATV----I 62 L PE +L H+ SF+ + R+ +L C ER R ++ + SP + Sbjct: 38 LDLPEPLLLHILSFLTDVRSRHRAALACGRMRAAERATRSELSLRG-DPRSPGFLFLSHA 96 Query: 63 RRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCL 122 RFP + ++L + WG +P + ++ + Sbjct: 97 FRFPALEHLDLS----------LVSPWG---HPLLSSVPPCGGGGGGAPSASSSSGMNVY 143 Query: 123 ELIAKSFKN-FKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPD 181 A S +N F L+ C + ++A CR+ L +++ HW Sbjct: 144 HPEAISEQNAFIAARLAGC----FPAVTSLAVYCRDPTTL-------ANLTPHW-----Q 187 Query: 182 TYTSLVSLNISCLASEVSF--SALERLVTRCPNLKSLKLNRA-----VPLEKLATLLQRA 234 V L + LE L+ C L+ L L+ + L T Sbjct: 188 ASLRRVKLVRWHQRPPTLPDGADLEPLLETCAALRELDLSEFYCWTEDVVRALTTHPSAT 247 Query: 235 PQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSG-------FWD-AVPAYLPAVYS 286 L L G A S L + C LR L F D L ++ + Sbjct: 248 AALTHLDLG-LAAATDGFKSSELGPIAASCPNLRKLVAPCLFNPRFSDCVGDDALLSLAT 306 Query: 287 VCSRLTTLNLS-----YATVQSYD-------LVKLLCQCPKLQRLWV---LDYIEDA-GL 330 C RLT L LS A +Q + LV P L+ + + +E A + Sbjct: 307 SCPRLTVLRLSEPFEAAANIQREEAAITVAGLVAFFAALPALEDFTMDLQHNVLEAAPAM 366 Query: 331 EVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESV-LYFCRQMTNAAL 389 E LA C ++ L + S + + + L V++ C LES+ + C+ +T+A+L Sbjct: 367 EALARRCPRIKFLTLG-SFQGLCKASWL----HLDGVAV-CGGLESLYMKNCQDLTDASL 420 Query: 390 ITIARNRPNMTRF 402 I R + +F Sbjct: 421 AAIGRGCRRLAKF 433 >6BRO-B nrPDB Length = 688 Score = 38.9 bits (89), Expect = 0.006, Method: Composition-based stats. Identities = 69/363 (19%), Positives = 106/363 (29%), Gaps = 97/363 (26%) Query: 220 RAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPA 279 A +LA L P + L+ R W P Sbjct: 132 NAFIAARLAGCFPAVTSLAVYCRD-------PTTLANLT-PHWQASLRRVKLVRWHQRPP 183 Query: 280 YLP------AVYSVCSRLTTLNLSYATVQSYDLVKLL----------------------- 310 LP + C+ L L+LS + D+V+ L Sbjct: 184 TLPDGADLEPLLETCAALRELDLSEFYCWTEDVVRALTTHPSATAALTHLDLGLAAATDG 243 Query: 311 ----------CQCPKLQRL--------WVLDYIEDAGLEVLASTCKDLRELRVFPSEPF- 351 CP L++L D + D L LA++C L LR+ SEPF Sbjct: 244 FKSSELGPIAASCPNLRKLVAPCLFNPRFSDCVGDDALLSLATSCPRLTVLRL--SEPFE 301 Query: 352 ----VMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCII 407 + A+T GLV+ P LE F + + L + + Sbjct: 302 AAANIQREEAAITVAGLVAFFAALPALED---FTMDLQHNVLEAAPA---------MEAL 349 Query: 408 EPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSGLLTDKVFEYIGTYAKKMEMLSVAFAG 467 + P + L G L +++ G L Y K + L Sbjct: 350 ARRCP-RIKFLTLGSFQGLCKASWLHLDGVAVCGGLESL-------YMKNCQDL------ 395 Query: 468 DSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKL-----ETMRSLWMSSCSVSFGA 522 +D + + GC L K I C D A +L T++ + + C + A Sbjct: 396 -TDASLAAIGRGCRRLAKFGIHGC---DLVTSAGIRRLAFTLRPTLKEVTVLHCRLLHTA 451 Query: 523 CKL 525 L Sbjct: 452 ECL 454 Score = 34.6 bits (78), Expect = 0.11, Method: Composition-based stats. Identities = 92/433 (21%), Positives = 152/433 (35%), Gaps = 74/433 (17%) Query: 7 LSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEIERWCRRKVFIGNCYAVSPATV----I 62 L PE +L H+ SF+ + R+ +L C ER R ++ + SP + Sbjct: 18 LDLPEPLLLHILSFLTDVRSRHRAALACGRMRAAERATRSELSLRG-DPRSPGFLFLSHA 76 Query: 63 RRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCL 122 RFP + ++L + WG +P + ++ + Sbjct: 77 FRFPALEHLDLS----------LVSPWG---HPLLSSVPPCGGGGGGAPSASSSSGMNVY 123 Query: 123 ELIAKSFKN-FKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPD 181 A S +N F L+ C + ++A CR+ L +++ HW Sbjct: 124 HPEAISEQNAFIAARLAGC----FPAVTSLAVYCRDPTTL-------ANLTPHW-----Q 167 Query: 182 TYTSLVSLNISCLASEVSF--SALERLVTRCPNLKSLKLNRA-----VPLEKLATLLQRA 234 V L + LE L+ C L+ L L+ + L T Sbjct: 168 ASLRRVKLVRWHQRPPTLPDGADLEPLLETCAALRELDLSEFYCWTEDVVRALTTHPSAT 227 Query: 235 PQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSG-------FWD-AVPAYLPAVYS 286 L L G A S L + C LR L F D L ++ + Sbjct: 228 AALTHLDLG-LAAATDGFKSSELGPIAASCPNLRKLVAPCLFNPRFSDCVGDDALLSLAT 286 Query: 287 VCSRLTTLNLS-----YATVQSYD-------LVKLLCQCPKLQRLWV---LDYIEDA-GL 330 C RLT L LS A +Q + LV P L+ + + +E A + Sbjct: 287 SCPRLTVLRLSEPFEAAANIQREEAAITVAGLVAFFAALPALEDFTMDLQHNVLEAAPAM 346 Query: 331 EVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESV-LYFCRQMTNAAL 389 E LA C ++ L + S + + + L V++ C LES+ + C+ +T+A+L Sbjct: 347 EALARRCPRIKFLTLG-SFQGLCKASWL----HLDGVAV-CGGLESLYMKNCQDLTDASL 400 Query: 390 ITIARNRPNMTRF 402 I R + +F Sbjct: 401 AAIGRGCRRLAKF 413 >4I6J-B nrPDB Length = 428 Score = 34.6 bits (78), Expect = 0.13, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 1/68 (1%) Query: 97 IEAMSSSYTWLEEIRLKRMVVTDDCLE-LIAKSFKNFKVLVLSSCEGFSTDGLAAIAATC 155 + + + L +++ V D L+ L+A + K+L +SSC S G+ +A C Sbjct: 164 LTVVFVNSKSLSSLKIDDTPVDDPSLKVLVANNSDTLKLLKMSSCPHVSPAGILCVADQC 223 Query: 156 RNLKELDL 163 L+EL L Sbjct: 224 HGLRELAL 231 >4CVS-A nrPDB Length = 159 Score = 31.2 bits (69), Expect = 1.2, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 27/52 (51%) Query: 230 LLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYL 281 L+ P L++LG +V + S L++ L G K LR G+ D+V Y+ Sbjct: 65 FLEGLPNLQDLGKLNIGEDVEEMLRSDLALELDGAKNLREAIGYADSVRDYV 116 >2CA6-A nrPDB Length = 386 Score = 30.0 bits (66), Expect = 2.8, Method: Composition-based stats. Identities = 38/187 (20%), Positives = 73/187 (39%), Gaps = 52/187 (27%) Query: 407 IEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSGLLTDKVFEYIGTYAKKMEMLSVAFA 466 I P+ ++L LE L +C++L+ L L D F ++G+ A L++A Sbjct: 199 IRPEGIEHLLLEGL--------AYCQELKVLDLQ----DNTFTHLGSSA-----LAIA-- 239 Query: 467 GDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLL 526 L +LR+L + DC + A + ++ + + + + +L Sbjct: 240 ----------LKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELD 289 Query: 527 GQKMPKLNVEVIDERGAPDSRPESCPVERVFIYRTVAGPRFDMPGFVWNMDQDSTMRFSR 586 + K VIDE+ PD ++ + G RF ++D + R Sbjct: 290 AVRTLK---TVIDEK-MPD-----------LLFLELNGNRFS--------EEDDVVDEIR 326 Query: 587 QIITTNG 593 ++ +T G Sbjct: 327 EVFSTRG 333 >3IP8-A nrPDB Length = 248 Score = 29.6 bits (65), Expect = 3.6, Method: Composition-based stats. Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 14/89 (15%) Query: 199 SFSALERLV-TRCPNL------KSLKLNRAVPLEKLATLLQRAPQLEEL---GTGGYTAE 248 +F A E LV T C +L +++ A ++ + AP + + G T + Sbjct: 136 AFLAEESLVPTGCRSLGITGVEAMARVDTATLVDLCVRAFEAAPDSDGILLSCGGLLTLD 195 Query: 249 VRPDVYSGLSVALSGCKELRCLSGFWDAV 277 P+V L V + +GFWDAV Sbjct: 196 AIPEVERRLGVPV----VSSSPAGFWDAV 220 >5BV3-A nrPDB Length = 345 Score = 29.6 bits (65), Expect = 3.6, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 57/144 (39%), Gaps = 23/144 (15%) Query: 81 DFNLV---PDGWGGYVYPWIEAMSSS--YTWLEEIRL-----KRMVVTDDCLELIAKSFK 130 +F+LV P+ + V P+IE M ++ W+ I +R+V D E Sbjct: 126 NFHLVRETPEMYKRIVQPYIEEMCNNGRLKWVNNILYEGAESERVVYKDFSEE---NKDD 182 Query: 131 NFKVLVLSSCEGFSTDGLAAIAATCR-NLKEL-DLRESDVDDVSGHWLSHFPDTYTSLVS 188 F +L +G + D L +A R ++K + DLR S WL + + S Sbjct: 183 GFLILPDMKWDGMNLDSLYLVAIVYRTDIKTIRDLRYS-----DRQWLINL---NNKIRS 234 Query: 189 LNISCLASEVSFSALERLVTRCPN 212 + C V L LV P+ Sbjct: 235 IVPGCYNYAVHPDELRILVHYQPS 258 >1OAH-A nrPDB Length = 519 Score = 29.6 bits (65), Expect = 3.8, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 41/107 (38%), Gaps = 14/107 (13%) Query: 128 SFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLV 187 + +F L + F+ DG + ATC N K + E W+S + D + S+ Sbjct: 121 AIDDF--LNIDRINRFAADGKGNLPATCWNCKTPKMME---------WVSQYGDKFWSMD 169 Query: 188 SLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRA 234 N +++ C + +++L E L L+R+ Sbjct: 170 V-NEFRAKDKINAHDETIGCANCHDPATMELRLYS--EPLKDWLKRS 213 >3VFC-A nrPDB Length = 445 Score = 29.2 bits (64), Expect = 4.6, Method: Composition-based stats. Identities = 34/143 (23%), Positives = 54/143 (37%), Gaps = 18/143 (12%) Query: 346 FPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTN--AALITIARNRPNMTRFR 403 FP P ++PN A T Q V V+ G LE VL + T + +A P Sbjct: 236 FPDHPLRLDPNAAWTPQTSVKVAAG---LEGVLEYLEDPTPGLDGMAEVAAQAPMPLATN 292 Query: 404 LCIIEPKAPDYLTLEPLDIGFGAIVE---HCKDLRRLSLSGLLTDKVFEYIGTYAKKMEM 460 +C++ A D L ++ + L+R L + D T+ + M Sbjct: 293 MCVV---AFDQLPAAVAKNSVQVVLSDHHYWGGLQRSRLLAGICD-------TFGLGLSM 342 Query: 461 LSVAFAGDSDLGMHHVLSGCDSL 483 S + G S M H+ + +L Sbjct: 343 HSNSHLGISLAAMVHLAAATPNL 365 >1SMS-A nrPDB Length = 345 Score = 28.8 bits (63), Expect = 6.7, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 29/78 (37%) Query: 183 YTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGT 242 YT L + L ++ + +E+++T ++ + ++P+EK L+ E Sbjct: 223 YTDFSCLLFAHLRTKPNPKIIEKIITEAVEIEKEYYSNSLPVEKFGMDLKSIHTYIEFVA 282 Query: 243 GGYTAEVRPDVYSGLSVA 260 G + Y Sbjct: 283 DGLLQGFGNEKYYNAVNP 300 >2Q4G-W nrPDB Length = 461 Score = 28.8 bits (63), Expect = 6.8, Method: Composition-based stats. Identities = 60/264 (22%), Positives = 99/264 (37%), Gaps = 44/264 (16%) Query: 306 LVKLLCQCPKLQRLWVLD-YIEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGL 364 L L P LQ L + D + DAGL++L +++P L + L Sbjct: 105 LSSTLRTLPTLQELHLSDNLLGDAGLQLLCE---------------GLLDPQCRLEKLQL 149 Query: 365 VSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFR-LCIIEPKAPDYLTLEPLDIG 423 S+ E + R + +T++ N N R LC +P L L+ Sbjct: 150 EYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLE-S 208 Query: 424 FGAIVEHCKDL----------RRLSL-SGLLTDKVFEYI--GTYAKKMEMLSV-----AF 465 G ++C+DL R L+L S L D + G + ++ Sbjct: 209 CGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGI 268 Query: 466 AGDSDLGMHHVLSGCDSLRKLEIRDCPFGDK-ALLANASKLE---TMRSLWMSSCSVSFG 521 + VL +SL++L + GD+ A L + LE + SLW+ SCS + Sbjct: 269 TAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAA 328 Query: 522 AC----KLLGQKMPKLNVEVIDER 541 C +L Q L +++ + R Sbjct: 329 CCSHFSSVLAQNRFLLELQISNNR 352 >3G06-A nrPDB Length = 622 Score = 28.5 bits (62), Expect = 7.8, Method: Composition-based stats. Identities = 51/232 (21%), Positives = 91/232 (39%), Gaps = 21/232 (9%) Query: 179 FPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLE 238 P T+LV + + + L L L SL + LE L+ L Sbjct: 59 LPAHITTLVIPDNNLTSLPALPPELRTLEVSGNQLTSLPVLPPGLLE-LSIFSNPLTHLP 117 Query: 239 ELGTGGYTAEVRPDVYSGLSVALSGCKELRC---LSGFWDAVPAYLPAVYSVCSRLTTLN 295 L +G + + + L V G +EL A+P+ L +++ ++LT+L Sbjct: 118 ALPSGLCKLWIFGNQLTSLPVLPPGLQELSVSDNQLASLPALPSELCKLWAYNNQLTSLP 177 Query: 296 LSYATVQ----SYDLVKLLCQCP-KLQRLWVLDY------IEDAGLEVLASTCKDLRELR 344 + + +Q S + + L P +L +LW + +GL+ L + L L Sbjct: 178 MLPSGLQELSVSDNQLASLPTLPSELYKLWAYNNRLTSLPALPSGLKELIVSGNRLTSLP 237 Query: 345 VFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTN--AALITIAR 394 V PSE + ++ L S+ M L S+ + Q+T +LI ++ Sbjct: 238 VLPSEL----KELMVSGNRLTSLPMLPSGLLSLSVYRNQLTRLPESLIHLSS 285 >2H5G-A nrPDB Length = 463 Score = 28.5 bits (62), Expect = 8.3, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 27/65 (41%) Query: 333 LASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITI 392 LA D R+ + ++ + E L L +S+ KL S+ RQ+ ++ ++ Sbjct: 60 LADLLTDQRDEILLANKKDLEEAEGRLAAPLLKRLSLSTSKLNSLAIGLRQIAASSQDSV 119 Query: 393 ARNRP 397 R Sbjct: 120 GRVLR 124 >4V3P-LD nrPDB Length = 372 Score = 28.5 bits (62), Expect = 9.4, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 48/106 (45%), Gaps = 5/106 (4%) Query: 12 EVLEHVFSFIQLDKDRNSVSL-VCKSWYEIERWCRRKVFIGNCYAVSPATVIRRFPKVRS 70 ++L+ V ++ +K ++SV + K R+ RK + Y + +++ F + Sbjct: 173 KILKQVGAYADAEKAKDSVGIRPGKGKMRNRRYINRKGPL-IVYGTEGSKIVKAFRNLPG 231 Query: 71 VELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMV 116 V++ +L P G G W E S++ LEE+ ++ +V Sbjct: 232 VDVANVERLNLLDLAPGGHLGRFVIWTE---SAFKKLEEVYVQSVV 274 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.318 0.137 0.388 Lambda K H 0.267 0.0423 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 23,258,525 Number of Sequences: 36641 Number of extensions: 945379 Number of successful extensions: 2244 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 18 Number of HSP's that attempted gapping in prelim test: 2159 Number of HSP's gapped (non-prelim): 58 length of query: 594 length of database: 10,336,785 effective HSP length: 103 effective length of query: 491 effective length of database: 6,562,762 effective search space: 3222316142 effective search space used: 3222316142 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 62 (28.4 bits)