BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q4QAU9 (549 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 6MSO-A nrPDB 1140 0.0 6MSN-A nrPDB 675 0.0 2ISB-A nrPDB 102 5e-22 5DNI-A nrPDB 99 5e-21 3E7D-A nrPDB 33 0.24 5ES6-A nrPDB 32 1.00 5ES8-A nrPDB 32 1.0 2MYF-A nrPDB 31 1.2 1F2V-A nrPDB 30 2.4 2VDJ-A nrPDB 29 4.7 1LV0-A nrPDB 28 7.2 >6MSO-A nrPDB Length = 585 Score = 1140 bits (2950), Expect = 0.0, Method: Compositional matrix adjust. Identities = 549/549 (100%), Positives = 549/549 (100%) Query: 1 MLRRLAPLLAEFNFVPLVSKVSHKETKYRLLTKDYVSVVQPGAGLPEMLRVDPAALTLLS 60 MLRRLAPLLAEFNFVPLVSKVSHKETKYRLLTKDYVSVVQPGAGLPEMLRVDPAALTLLS Sbjct: 37 MLRRLAPLLAEFNFVPLVSKVSHKETKYRLLTKDYVSVVQPGAGLPEMLRVDPAALTLLS 96 Query: 61 STAFDDVEHLLRSSHLMSLRKIFDDPEASDNDKFVALQLLKNANISSARLLPGCQDTGTA 120 STAFDDVEHLLRSSHLMSLRKIFDDPEASDNDKFVALQLLKNANISSARLLPGCQDTGTA Sbjct: 97 STAFDDVEHLLRSSHLMSLRKIFDDPEASDNDKFVALQLLKNANISSARLLPGCQDTGTA 156 Query: 121 IIAGYRGDQVFVPGNDEEALSRGVYDIFQKRNFRYSQNVPLSMYDEKNTGTNLPAQIDLY 180 IIAGYRGDQVFVPGNDEEALSRGVYDIFQKRNFRYSQNVPLSMYDEKNTGTNLPAQIDLY Sbjct: 157 IIAGYRGDQVFVPGNDEEALSRGVYDIFQKRNFRYSQNVPLSMYDEKNTGTNLPAQIDLY 216 Query: 181 ASKGMEYSFMFVAKGGGSANKSFLLQETKSVLNPKSLRNFLKEKLAMFGTSACPPYHVAV 240 ASKGMEYSFMFVAKGGGSANKSFLLQETKSVLNPKSLRNFLKEKLAMFGTSACPPYHVAV Sbjct: 217 ASKGMEYSFMFVAKGGGSANKSFLLQETKSVLNPKSLRNFLKEKLAMFGTSACPPYHVAV 276 Query: 241 VIGGTSAEMTMKVLKYASCHYYDDLITKPDMKTGYTFRDLELEEEVLKVCQNIGMGAQFG 300 VIGGTSAEMTMKVLKYASCHYYDDLITKPDMKTGYTFRDLELEEEVLKVCQNIGMGAQFG Sbjct: 277 VIGGTSAEMTMKVLKYASCHYYDDLITKPDMKTGYTFRDLELEEEVLKVCQNIGMGAQFG 336 Query: 301 GKYYAHDVRVIRMPRHGASCPIGIGVSCSADRQALGKINKDGVWLEELEMEPSQYLPDLK 360 GKYYAHDVRVIRMPRHGASCPIGIGVSCSADRQALGKINKDGVWLEELEMEPSQYLPDLK Sbjct: 337 GKYYAHDVRVIRMPRHGASCPIGIGVSCSADRQALGKINKDGVWLEELEMEPSQYLPDLK 396 Query: 361 EDELLKTPAVMVNLNRPMPEVLQELSKHPVRTRLSLTGTIIVARDSAHARMREMLEAGKP 420 EDELLKTPAVMVNLNRPMPEVLQELSKHPVRTRLSLTGTIIVARDSAHARMREMLEAGKP Sbjct: 397 EDELLKTPAVMVNLNRPMPEVLQELSKHPVRTRLSLTGTIIVARDSAHARMREMLEAGKP 456 Query: 421 LPQYMKEHPVYYAGPAKQPDGLPSGSFGPTTAGRMDPFVDLFQSHGGSMVMLAKGNRSKQ 480 LPQYMKEHPVYYAGPAKQPDGLPSGSFGPTTAGRMDPFVDLFQSHGGSMVMLAKGNRSKQ Sbjct: 457 LPQYMKEHPVYYAGPAKQPDGLPSGSFGPTTAGRMDPFVDLFQSHGGSMVMLAKGNRSKQ 516 Query: 481 VTKACHKYGGFYLGSIGGPAAVLAQNAIKKVECLDMKDLGMEAVWRIEVENFPAFIVVDD 540 VTKACHKYGGFYLGSIGGPAAVLAQNAIKKVECLDMKDLGMEAVWRIEVENFPAFIVVDD Sbjct: 517 VTKACHKYGGFYLGSIGGPAAVLAQNAIKKVECLDMKDLGMEAVWRIEVENFPAFIVVDD 576 Query: 541 KGNDFFEQL 549 KGNDFFEQL Sbjct: 577 KGNDFFEQL 585 >6MSN-A nrPDB Length = 604 Score = 675 bits (1742), Expect = 0.0, Method: Compositional matrix adjust. Identities = 322/543 (59%), Positives = 414/543 (76%), Gaps = 8/543 (1%) Query: 10 AEFNFVPLVSKVS--HKETKYRLL--TKDYVSVVQPGAGLPEMLRVDPAALTLLSSTAFD 65 A+F+F + H +T++ + ++ YV V+ + L+V+P ALT+L+ AF Sbjct: 63 ADFHFSAIFQPTDPHHHQTEFAKVEGSEKYVEEVEVFG--RQALKVNPEALTILAHRAFS 120 Query: 66 DVEHLLRSSHLMSLRKIFDDPEASDNDKFVALQLLKNANISSARLLPGCQDTGTAIIAGY 125 DV H R HL R+ +DPEASDND++VA LLKNA I++ R+LP CQDTGTAI+ G Sbjct: 121 DVHHFFRKDHLEGWRRAIEDPEASDNDRYVATTLLKNACIAAGRVLPSCQDTGTAIVLGK 180 Query: 126 RGDQVFVPGNDEEALSRGVYDIFQKRNFRYSQNVPLSMYDEKNTGTNLPAQIDLYASKGM 185 RG+ + G DE+ LS+G+++ ++ N RYSQ L M+ E NTG NLPAQ+DL A G Sbjct: 181 RGELCWTGGEDEKYLSKGIWNAYRYHNLRYSQTAALDMFKECNTGDNLPAQLDLLAVPGS 240 Query: 186 EYSFMFVAKGGGSANKSFLLQETKSVLNPKSLRNFLKEKLAMFGTSACPPYHVAVVIGGT 245 +Y F+F+AKGGGSANK++L QETK++LNPKSLR F++EKL GT+ACPPYH+A+VIGGT Sbjct: 241 DYEFLFIAKGGGSANKAYLYQETKALLNPKSLRAFIEEKLKTLGTAACPPYHIALVIGGT 300 Query: 246 SAEMTMKVLKYASCHYYDDLITKPDMKTGYTFRDLELEEEVLKVCQNIGMGAQFGGKYYA 305 SAEMTMK +K ASC YYD L T D K G FRD E E+ V++V Q G+GAQFGGKY+A Sbjct: 301 SAEMTMKTVKLASCRYYDSLPTTGD-KYGRAFRDPEWEKIVMEVAQKSGIGAQFGGKYFA 359 Query: 306 HDVRVIRMPRHGASCPIGIGVSCSADRQALGKINKDGVWLEELEMEPSQYLPDLKEDELL 365 H RVIR+PRHGASCP+G+ VSCSADRQ L INK G+++E+LE P+QYLPD+ E L Sbjct: 360 HQARVIRLPRHGASCPVGLAVSCSADRQILAHINKSGIYIEQLEQNPAQYLPDIPEVH-L 418 Query: 366 KTPAVMVNLNRPMPEVLQELSKHPVRTRLSLTGTIIVARDSAHARMREMLEAGKPLPQYM 425 T +V V+L RP+ +V Q+LS++PV TR+ L GT+IVARD AHA+++EM++ G+PLP+YM Sbjct: 419 STTSVKVDLKRPIDKVRQQLSQYPVGTRVMLNGTLIVARDIAHAKIKEMMDNGEPLPEYM 478 Query: 426 KEHPVYYAGPAKQPDGLPSGSFGPTTAGRMDPFVDLFQSHGGSMVMLAKGNRSKQVTKAC 485 K P+YYAGPAK P+G SGSFGPTTAGRMD +VDLFQSHGGS + LAKGNRSKQVT AC Sbjct: 479 KTSPIYYAGPAKTPEGYASGSFGPTTAGRMDSYVDLFQSHGGSYITLAKGNRSKQVTDAC 538 Query: 486 HKYGGFYLGSIGGPAAVLAQNAIKKVECLDMKDLGMEAVWRIEVENFPAFIVVDDKGNDF 545 K+GGFYLGSIGGPAA+LA+++IK+V CL +LGMEAVW+IEVE+FPAFIVVDDKGND Sbjct: 539 KKHGGFYLGSIGGPAAILAKDSIKQVTCLAFPELGMEAVWKIEVEDFPAFIVVDDKGNDM 598 Query: 546 FEQ 548 + + Sbjct: 599 YSK 601 >2ISB-A nrPDB Length = 192 Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 65/173 (37%), Positives = 92/173 (53%), Gaps = 5/173 (2%) Query: 379 PEVLQELSKHPVRTRLSLTGTIIVARDSAHARMREMLEAGKPLPQYMKEHPVYYAGP-AK 437 P V ++ K V + +TG I ARD AHAR E +E GK LP + VY+ GP K Sbjct: 22 PLVKDQILKLKVGDVVYITGEIFTARDEAHARALEWMEEGKELPFSFDKGVVYHCGPLVK 81 Query: 438 QPDGLPSGSFGPTTAGRMDPFVDLFQSHGGSMVMLAKGNRSKQVTKACHKYGGFYLGSIG 497 + D S GPTT+ RM+PF M ++ KG S++V +A ++ + Sbjct: 82 KNDEWRVVSAGPTTSARMNPFTPKILEKVECMGIIGKGGMSEEVVEAMRGKAAYF--AFT 139 Query: 498 GPAAVLAQNAIKKVECLDMKDLGM-EAVWRIEVENF-PAFIVVDDKGNDFFEQ 548 G A LA +IKKV+ + +DLGM EAVW +EVE F P + +D GN + + Sbjct: 140 GGAGALAAMSIKKVKGVVWEDLGMPEAVWLLEVERFGPCIVAIDAHGNSLYRR 192 >5DNI-A nrPDB Length = 179 Score = 99.0 bits (245), Expect = 5e-21, Method: Composition-based stats. Identities = 64/170 (37%), Positives = 94/170 (55%), Gaps = 6/170 (3%) Query: 383 QELSKHPVRTRLSLTGTIIVARDSAHARMREMLEAGKPLPQYMKEHPVYYAGP--AKQPD 440 +++ K V + L G I ARD AH ++ EML++ + LP + E +Y+AGP K D Sbjct: 11 KDVKKLKVGDIVYLNGKIYTARDEAHLKIIEMLKSNEKLPFDLNESIIYHAGPIMKKVND 70 Query: 441 GLPSGSFGPTTAGRMDPFVDLFQSHGGSMVMLAKGNRSKQVTKACHKYGGFYLGSIGGPA 500 S GPTT+ RM+ + F ++ KG K++ K YG YL + GG A Sbjct: 71 SWVCVSIGPTTSARMNDVEEEFIKLTNISAIVGKGGMKKELLKTFEDYGVVYLAAPGGCA 130 Query: 501 AVLAQNAIKKVECLDMKD-LGM-EAVWRIEVENF-PAFIVVDDKGNDFFE 547 A+LA N++K+V+ + D LGM EAVW +EV NF P + +D GN +E Sbjct: 131 ALLA-NSVKRVDNVYFLDELGMPEAVWELEVNNFGPLIVAMDSHGNSIYE 179 >3E7D-A nrPDB Length = 212 Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust. Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 15/115 (13%) Query: 370 VMVNLNRP-MPEVLQELSKHPVRTRLSL-----TGTIIVARDSAHA--RMREMLEAGKPL 421 V+ L+ P +PE+ +++ L L G+I+ ++ A R+ E+L+AG P Sbjct: 98 VIYTLSDPSVPELAKKIGNTRSAAALDLWLPHIEGSIVAIGNAPTALFRLFELLDAGAPK 157 Query: 422 PQYMKEHPVYYAGPAKQPDGLPSGSFGPTTAGRMDPFVDLFQSHGGSMVMLAKGN 476 P + PV + G A+ D L + S G P+V + GGS + A N Sbjct: 158 PALIIGMPVGFVGAAESKDELAANSRGV-------PYVIVRGRRGGSAMTAAAVN 205 >5ES6-A nrPDB Length = 685 Score = 31.6 bits (70), Expect = 1.00, Method: Compositional matrix adjust. Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 4/60 (6%) Query: 374 LNRPMPEVLQELSKHPVRTRLSLTGTIIVARDSAHARMREMLEAGKPLPQYMKEHPVYYA 433 +N P+ E+ L+K R L G + + H +RE L G LP YM P Y+ Sbjct: 605 MNHPLIELTTVLAKEQADGRKYLVGYYVAPEEIPHGELREWL--GNDLPDYMI--PTYFV 660 >5ES8-A nrPDB Length = 776 Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust. Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 4/60 (6%) Query: 374 LNRPMPEVLQELSKHPVRTRLSLTGTIIVARDSAHARMREMLEAGKPLPQYMKEHPVYYA 433 +N P+ E+ L+K R L G + + H +RE L G LP YM P Y+ Sbjct: 605 MNHPLIELTTVLAKEQADGRKYLVGYYVAPEEIPHGELREWL--GNDLPDYMI--PTYFV 660 >2MYF-A nrPDB Length = 89 Score = 31.2 bits (69), Expect = 1.2, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 23/43 (53%) Query: 128 DQVFVPGNDEEALSRGVYDIFQKRNFRYSQNVPLSMYDEKNTG 170 D +FV G DE + +YDIF + VPL+M +KN G Sbjct: 11 DILFVGGIDETIDEKSLYDIFSSFGDIRNIEVPLNMTTKKNRG 53 >1F2V-A nrPDB Length = 219 Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 7/64 (10%) Query: 413 EMLEAGKPLPQYMKEHPVYYAGPAKQPDGLPSGSFGPTTAGRMDPFVDLFQSHGGSMVML 472 EML G P P + PV + G A+ D L S+G PF + GGS + Sbjct: 156 EMLRDGAPKPAAILGMPVGFVGAAESKDALAENSYGV-------PFAIVRGRLGGSAMTA 208 Query: 473 AKGN 476 A N Sbjct: 209 AALN 212 >2VDJ-A nrPDB Length = 301 Score = 29.3 bits (64), Expect = 4.7, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 1/79 (1%) Query: 59 LSSTAFDDVEHLLRSSHLMSLRKIFDDPEASDNDKFVALQLLKNANISSARLLPGCQDTG 118 L F EH +R H+ L+ FD+ + + + ++ + LL ++ G Sbjct: 160 LKEKMFGVFEHEVREQHVKLLQG-FDELFFAVHSRHTEVRESDIREVKELTLLANSEEAG 218 Query: 119 TAIIAGYRGDQVFVPGNDE 137 ++ G G QVF G+ E Sbjct: 219 VHLVIGQEGRQVFALGHSE 237 >1LV0-A nrPDB Length = 449 Score = 28.5 bits (62), Expect = 7.2, Method: Compositional matrix adjust. Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 1/31 (3%) Query: 125 YRGDQVF-VPGNDEEALSRGVYDIFQKRNFR 154 Y+G +++ VP + EAL+ + +F+KR FR Sbjct: 113 YKGGKIYKVPSTETEALASNLMGMFEKRRFR 143 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 6MSO-A nrPDB 989 0.0 6MSN-A nrPDB 950 0.0 2ISB-A nrPDB 252 3e-67 5DNI-A nrPDB 241 8e-64 Sequences not found previously or not previously below threshold: 3ICS-A nrPDB 34 0.18 5ES8-A nrPDB 31 1.1 5ES6-A nrPDB 31 1.1 3IMN-A nrPDB 31 1.5 4AD7-A nrPDB 31 1.5 5LSM-A nrPDB 30 1.9 2Q7V-A nrPDB 30 2.5 2MYF-A nrPDB 29 4.3 CONVERGED! >6MSO-A nrPDB Length = 585 Score = 989 bits (2556), Expect = 0.0, Method: Composition-based stats. Identities = 549/549 (100%), Positives = 549/549 (100%) Query: 1 MLRRLAPLLAEFNFVPLVSKVSHKETKYRLLTKDYVSVVQPGAGLPEMLRVDPAALTLLS 60 MLRRLAPLLAEFNFVPLVSKVSHKETKYRLLTKDYVSVVQPGAGLPEMLRVDPAALTLLS Sbjct: 37 MLRRLAPLLAEFNFVPLVSKVSHKETKYRLLTKDYVSVVQPGAGLPEMLRVDPAALTLLS 96 Query: 61 STAFDDVEHLLRSSHLMSLRKIFDDPEASDNDKFVALQLLKNANISSARLLPGCQDTGTA 120 STAFDDVEHLLRSSHLMSLRKIFDDPEASDNDKFVALQLLKNANISSARLLPGCQDTGTA Sbjct: 97 STAFDDVEHLLRSSHLMSLRKIFDDPEASDNDKFVALQLLKNANISSARLLPGCQDTGTA 156 Query: 121 IIAGYRGDQVFVPGNDEEALSRGVYDIFQKRNFRYSQNVPLSMYDEKNTGTNLPAQIDLY 180 IIAGYRGDQVFVPGNDEEALSRGVYDIFQKRNFRYSQNVPLSMYDEKNTGTNLPAQIDLY Sbjct: 157 IIAGYRGDQVFVPGNDEEALSRGVYDIFQKRNFRYSQNVPLSMYDEKNTGTNLPAQIDLY 216 Query: 181 ASKGMEYSFMFVAKGGGSANKSFLLQETKSVLNPKSLRNFLKEKLAMFGTSACPPYHVAV 240 ASKGMEYSFMFVAKGGGSANKSFLLQETKSVLNPKSLRNFLKEKLAMFGTSACPPYHVAV Sbjct: 217 ASKGMEYSFMFVAKGGGSANKSFLLQETKSVLNPKSLRNFLKEKLAMFGTSACPPYHVAV 276 Query: 241 VIGGTSAEMTMKVLKYASCHYYDDLITKPDMKTGYTFRDLELEEEVLKVCQNIGMGAQFG 300 VIGGTSAEMTMKVLKYASCHYYDDLITKPDMKTGYTFRDLELEEEVLKVCQNIGMGAQFG Sbjct: 277 VIGGTSAEMTMKVLKYASCHYYDDLITKPDMKTGYTFRDLELEEEVLKVCQNIGMGAQFG 336 Query: 301 GKYYAHDVRVIRMPRHGASCPIGIGVSCSADRQALGKINKDGVWLEELEMEPSQYLPDLK 360 GKYYAHDVRVIRMPRHGASCPIGIGVSCSADRQALGKINKDGVWLEELEMEPSQYLPDLK Sbjct: 337 GKYYAHDVRVIRMPRHGASCPIGIGVSCSADRQALGKINKDGVWLEELEMEPSQYLPDLK 396 Query: 361 EDELLKTPAVMVNLNRPMPEVLQELSKHPVRTRLSLTGTIIVARDSAHARMREMLEAGKP 420 EDELLKTPAVMVNLNRPMPEVLQELSKHPVRTRLSLTGTIIVARDSAHARMREMLEAGKP Sbjct: 397 EDELLKTPAVMVNLNRPMPEVLQELSKHPVRTRLSLTGTIIVARDSAHARMREMLEAGKP 456 Query: 421 LPQYMKEHPVYYAGPAKQPDGLPSGSFGPTTAGRMDPFVDLFQSHGGSMVMLAKGNRSKQ 480 LPQYMKEHPVYYAGPAKQPDGLPSGSFGPTTAGRMDPFVDLFQSHGGSMVMLAKGNRSKQ Sbjct: 457 LPQYMKEHPVYYAGPAKQPDGLPSGSFGPTTAGRMDPFVDLFQSHGGSMVMLAKGNRSKQ 516 Query: 481 VTKACHKYGGFYLGSIGGPAAVLAQNAIKKVECLDMKDLGMEAVWRIEVENFPAFIVVDD 540 VTKACHKYGGFYLGSIGGPAAVLAQNAIKKVECLDMKDLGMEAVWRIEVENFPAFIVVDD Sbjct: 517 VTKACHKYGGFYLGSIGGPAAVLAQNAIKKVECLDMKDLGMEAVWRIEVENFPAFIVVDD 576 Query: 541 KGNDFFEQL 549 KGNDFFEQL Sbjct: 577 KGNDFFEQL 585 >6MSN-A nrPDB Length = 604 Score = 950 bits (2455), Expect = 0.0, Method: Composition-based stats. Identities = 322/543 (59%), Positives = 414/543 (76%), Gaps = 8/543 (1%) Query: 10 AEFNFVPLVSKVS--HKETKYRLL--TKDYVSVVQPGAGLPEMLRVDPAALTLLSSTAFD 65 A+F+F + H +T++ + ++ YV V+ + L+V+P ALT+L+ AF Sbjct: 63 ADFHFSAIFQPTDPHHHQTEFAKVEGSEKYVEEVEVFG--RQALKVNPEALTILAHRAFS 120 Query: 66 DVEHLLRSSHLMSLRKIFDDPEASDNDKFVALQLLKNANISSARLLPGCQDTGTAIIAGY 125 DV H R HL R+ +DPEASDND++VA LLKNA I++ R+LP CQDTGTAI+ G Sbjct: 121 DVHHFFRKDHLEGWRRAIEDPEASDNDRYVATTLLKNACIAAGRVLPSCQDTGTAIVLGK 180 Query: 126 RGDQVFVPGNDEEALSRGVYDIFQKRNFRYSQNVPLSMYDEKNTGTNLPAQIDLYASKGM 185 RG+ + G DE+ LS+G+++ ++ N RYSQ L M+ E NTG NLPAQ+DL A G Sbjct: 181 RGELCWTGGEDEKYLSKGIWNAYRYHNLRYSQTAALDMFKECNTGDNLPAQLDLLAVPGS 240 Query: 186 EYSFMFVAKGGGSANKSFLLQETKSVLNPKSLRNFLKEKLAMFGTSACPPYHVAVVIGGT 245 +Y F+F+AKGGGSANK++L QETK++LNPKSLR F++EKL GT+ACPPYH+A+VIGGT Sbjct: 241 DYEFLFIAKGGGSANKAYLYQETKALLNPKSLRAFIEEKLKTLGTAACPPYHIALVIGGT 300 Query: 246 SAEMTMKVLKYASCHYYDDLITKPDMKTGYTFRDLELEEEVLKVCQNIGMGAQFGGKYYA 305 SAEMTMK +K ASC YYD L T D K G FRD E E+ V++V Q G+GAQFGGKY+A Sbjct: 301 SAEMTMKTVKLASCRYYDSLPTTGD-KYGRAFRDPEWEKIVMEVAQKSGIGAQFGGKYFA 359 Query: 306 HDVRVIRMPRHGASCPIGIGVSCSADRQALGKINKDGVWLEELEMEPSQYLPDLKEDELL 365 H RVIR+PRHGASCP+G+ VSCSADRQ L INK G+++E+LE P+QYLPD+ E L Sbjct: 360 HQARVIRLPRHGASCPVGLAVSCSADRQILAHINKSGIYIEQLEQNPAQYLPDIPEVH-L 418 Query: 366 KTPAVMVNLNRPMPEVLQELSKHPVRTRLSLTGTIIVARDSAHARMREMLEAGKPLPQYM 425 T +V V+L RP+ +V Q+LS++PV TR+ L GT+IVARD AHA+++EM++ G+PLP+YM Sbjct: 419 STTSVKVDLKRPIDKVRQQLSQYPVGTRVMLNGTLIVARDIAHAKIKEMMDNGEPLPEYM 478 Query: 426 KEHPVYYAGPAKQPDGLPSGSFGPTTAGRMDPFVDLFQSHGGSMVMLAKGNRSKQVTKAC 485 K P+YYAGPAK P+G SGSFGPTTAGRMD +VDLFQSHGGS + LAKGNRSKQVT AC Sbjct: 479 KTSPIYYAGPAKTPEGYASGSFGPTTAGRMDSYVDLFQSHGGSYITLAKGNRSKQVTDAC 538 Query: 486 HKYGGFYLGSIGGPAAVLAQNAIKKVECLDMKDLGMEAVWRIEVENFPAFIVVDDKGNDF 545 K+GGFYLGSIGGPAA+LA+++IK+V CL +LGMEAVW+IEVE+FPAFIVVDDKGND Sbjct: 539 KKHGGFYLGSIGGPAAILAKDSIKQVTCLAFPELGMEAVWKIEVEDFPAFIVVDDKGNDM 598 Query: 546 FEQ 548 + + Sbjct: 599 YSK 601 >2ISB-A nrPDB Length = 192 Score = 252 bits (644), Expect = 3e-67, Method: Composition-based stats. Identities = 65/173 (37%), Positives = 92/173 (53%), Gaps = 5/173 (2%) Query: 379 PEVLQELSKHPVRTRLSLTGTIIVARDSAHARMREMLEAGKPLPQYMKEHPVYYAGP-AK 437 P V ++ K V + +TG I ARD AHAR E +E GK LP + VY+ GP K Sbjct: 22 PLVKDQILKLKVGDVVYITGEIFTARDEAHARALEWMEEGKELPFSFDKGVVYHCGPLVK 81 Query: 438 QPDGLPSGSFGPTTAGRMDPFVDLFQSHGGSMVMLAKGNRSKQVTKACHKYGGFYLGSIG 497 + D S GPTT+ RM+PF M ++ KG S++V +A ++ + Sbjct: 82 KNDEWRVVSAGPTTSARMNPFTPKILEKVECMGIIGKGGMSEEVVEAMRGKAAYF--AFT 139 Query: 498 GPAAVLAQNAIKKVECLDMKDLGM-EAVWRIEVENF-PAFIVVDDKGNDFFEQ 548 G A LA +IKKV+ + +DLGM EAVW +EVE F P + +D GN + + Sbjct: 140 GGAGALAAMSIKKVKGVVWEDLGMPEAVWLLEVERFGPCIVAIDAHGNSLYRR 192 >5DNI-A nrPDB Length = 179 Score = 241 bits (614), Expect = 8e-64, Method: Composition-based stats. Identities = 64/173 (36%), Positives = 94/173 (54%), Gaps = 6/173 (3%) Query: 380 EVLQELSKHPVRTRLSLTGTIIVARDSAHARMREMLEAGKPLPQYMKEHPVYYAGP--AK 437 +++ K V + L G I ARD AH ++ EML++ + LP + E +Y+AGP K Sbjct: 8 LTKKDVKKLKVGDIVYLNGKIYTARDEAHLKIIEMLKSNEKLPFDLNESIIYHAGPIMKK 67 Query: 438 QPDGLPSGSFGPTTAGRMDPFVDLFQSHGGSMVMLAKGNRSKQVTKACHKYGGFYLGSIG 497 D S GPTT+ RM+ + F ++ KG K++ K YG YL + G Sbjct: 68 VNDSWVCVSIGPTTSARMNDVEEEFIKLTNISAIVGKGGMKKELLKTFEDYGVVYLAAPG 127 Query: 498 GPAAVLAQNAIKKVECLDMKD-LGM-EAVWRIEVENF-PAFIVVDDKGNDFFE 547 G AA+LA N++K+V+ + D LGM EAVW +EV NF P + +D GN +E Sbjct: 128 GCAALLA-NSVKRVDNVYFLDELGMPEAVWELEVNNFGPLIVAMDSHGNSIYE 179 >3ICS-A nrPDB Length = 588 Score = 33.8 bits (76), Expect = 0.18, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 3/67 (4%) Query: 355 YLPDLKEDELLKTPAVMVNLNRPMPEVLQELSKHPVRTRLSLTGTIIVARDSAHARMREM 414 YL D++E LK + ++N P+ E+ L + PV + +T + + + R + Sbjct: 505 YLIDVREPNELKQGMIKGSINIPLDELRDRLEEVPVDKDIYITCQLGM---RGYVAARML 561 Query: 415 LEAGKPL 421 +E G + Sbjct: 562 MEKGYKV 568 >5ES8-A nrPDB Length = 776 Score = 31.1 bits (69), Expect = 1.1, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 2/52 (3%) Query: 374 LNRPMPEVLQELSKHPVRTRLSLTGTIIVARDSAHARMREMLEAGKPLPQYM 425 +N P+ E+ L+K R L G + + H +RE L G LP YM Sbjct: 605 MNHPLIELTTVLAKEQADGRKYLVGYYVAPEEIPHGELREWL--GNDLPDYM 654 >5ES6-A nrPDB Length = 685 Score = 31.1 bits (69), Expect = 1.1, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 2/52 (3%) Query: 374 LNRPMPEVLQELSKHPVRTRLSLTGTIIVARDSAHARMREMLEAGKPLPQYM 425 +N P+ E+ L+K R L G + + H +RE L G LP YM Sbjct: 605 MNHPLIELTTVLAKEQADGRKYLVGYYVAPEEIPHGELREWL--GNDLPDYM 654 >3IMN-A nrPDB Length = 378 Score = 30.8 bits (68), Expect = 1.5, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 5/69 (7%) Query: 384 ELSKHPVRTRLSLTGTIIVARDSAHARMREMLEAGKPLPQYMKEHPVYYAGPAK----QP 439 E+ K V + L T +++ H ++ + + G P+ + PVY AG + Sbjct: 165 EVKKLTVDEFVELEKTTFFKKNAGHEKVVRLDKQGNPM-KDKNGKPVYKAGKLNGWLVEQ 223 Query: 440 DGLPSGSFG 448 G P +FG Sbjct: 224 GGYPPLAFG 232 >4AD7-A nrPDB Length = 528 Score = 30.8 bits (68), Expect = 1.5, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 7/71 (9%) Query: 325 GVSCSADRQALGKINKDGVWLEELEMEPSQYLPDLKEDEL---LKTPAVMVNLNRPMPEV 381 G CS ++ AL + D W M +YLP++ D L + P V V++ +P + Sbjct: 397 GTLCS-EKMALSTASDDRCWNG---MARGRYLPEVMGDGLANQINNPEVEVDITKPDMTI 452 Query: 382 LQELSKHPVRT 392 Q++ + + T Sbjct: 453 RQQIMQLKIMT 463 >5LSM-A nrPDB Length = 359 Score = 30.4 bits (67), Expect = 1.9, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 18/40 (45%) Query: 2 LRRLAPLLAEFNFVPLVSKVSHKETKYRLLTKDYVSVVQP 41 L +LAP AEFN P + T Y + ++ +P Sbjct: 87 LEQLAPYFAEFNLDPNAQPAGAQRTPYSKAQAEVLAKFKP 126 >2Q7V-A nrPDB Length = 325 Score = 30.0 bits (66), Expect = 2.5, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 6/56 (10%) Query: 484 ACHKYGGFYLGSIGGPAAVLAQNAIKKVE-CLDMKDLGM---EAVWRIEVENFPAF 535 H Y +G GGPA + A + + + + GM + W EVENFP F Sbjct: 5 TAHDYDVVIIG--GGPAGLTAAIYTGRAQLSTLILEKGMPGGQIAWSEEVENFPGF 58 >2MYF-A nrPDB Length = 89 Score = 29.2 bits (64), Expect = 4.3, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 23/43 (53%) Query: 128 DQVFVPGNDEEALSRGVYDIFQKRNFRYSQNVPLSMYDEKNTG 170 D +FV G DE + +YDIF + VPL+M +KN G Sbjct: 11 DILFVGGIDETIDEKSLYDIFSSFGDIRNIEVPLNMTTKKNRG 53 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.314 0.138 0.387 Lambda K H 0.267 0.0416 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 22,538,158 Number of Sequences: 36641 Number of extensions: 945200 Number of successful extensions: 2293 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 12 Number of HSP's that attempted gapping in prelim test: 2259 Number of HSP's gapped (non-prelim): 27 length of query: 549 length of database: 10,336,785 effective HSP length: 102 effective length of query: 447 effective length of database: 6,599,403 effective search space: 2949933141 effective search space used: 2949933141 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 62 (28.5 bits)