BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q46948 (196 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5SY4-A nrPDB 397 e-111 4E08-A nrPDB 147 4e-36 3OT1-B nrPDB 145 8e-36 1PDW-A nrPDB 116 7e-27 4GE0-A nrPDB 85 2e-17 4K2H-A nrPDB 73 7e-14 3L18-A nrPDB 49 1e-06 1G2I-A nrPDB 46 1e-05 2VRN-A nrPDB 45 2e-05 1OI4-A nrPDB 45 2e-05 4OFW-A nrPDB 43 7e-05 3MGK-A nrPDB 34 0.038 1N57-A nrPDB 34 0.050 1OY1-A nrPDB 32 0.17 5GZJ-A nrPDB 30 0.61 5VJ7-A nrPDB 30 0.87 5JFC-L nrPDB 30 0.88 1JGT-A nrPDB 29 1.3 4XF7-A nrPDB 28 2.7 2K5I-A nrPDB 28 3.0 5JZM-A nrPDB 27 5.0 4CZ1-A nrPDB 27 5.7 >5SY4-A nrPDB Length = 199 Score = 397 bits (1020), Expect = e-111, Method: Compositional matrix adjust. Identities = 196/196 (100%), Positives = 196/196 (100%) Query: 1 MSASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLV 60 MSASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLV Sbjct: 4 MSASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLV 63 Query: 61 EVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFP 120 EVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFP Sbjct: 64 EVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFP 123 Query: 121 IGNMTGFPTLKDKIPAEQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLLVGREKAHE 180 IGNMTGFPTLKDKIPAEQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLLVGREKAHE Sbjct: 124 IGNMTGFPTLKDKIPAEQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLLVGREKAHE 183 Query: 181 VASQLVMAAGIYNYYE 196 VASQLVMAAGIYNYYE Sbjct: 184 VASQLVMAAGIYNYYE 199 >4E08-A nrPDB Length = 190 Score = 147 bits (370), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 86/195 (44%), Positives = 123/195 (63%), Gaps = 10/195 (5%) Query: 1 MSASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLV 60 MS SALV LAPG+EE E + D+L R GIKVT A + +G A+ CSR V++L D L Sbjct: 4 MSKSALVILAPGAEEMEFIIAADVLRRAGIKVTVAGL--NGGEAVKCSRDVQILPDTSLA 61 Query: 61 EVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFP 120 +VA ++DV+VLPGG+ G+ +S+L+ + ++ G ++AAICAAP TVL H + Sbjct: 62 QVASDKFDVVVLPGGLGGSNAMGESSLVGDLLRSQESGGGLIAAICAAP-TVLAKHGVAS 120 Query: 121 IGNMTGFPTLKDKIPAEQWL--DKRVVWDARVKLLTSQGPGTAIDFGLKIIDLLVGREKA 178 ++T +P++K ++ DK VV D L+TS+GPGTA +F LKI + L G+EK Sbjct: 121 GKSLTSYPSMKPQLVNNYSYVDDKTVVKDGN--LITSRGPGTAYEFALKIAEELAGKEKV 178 Query: 179 HEVASQLVMAAGIYN 193 EVA L++A YN Sbjct: 179 QEVAKGLLVA---YN 190 >3OT1-B nrPDB Length = 208 Score = 145 bits (367), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 83/187 (44%), Positives = 109/187 (58%), Gaps = 2/187 (1%) Query: 1 MSASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLV 60 MS LV +A GSEE E V +D LVR G +VT A+V L + SRGV L A+ L Sbjct: 8 MSKRILVPVAHGSEEMETVIIVDTLVRAGFQVTMAAVGD--KLQVQGSRGVWLTAEQTLE 65 Query: 61 EVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFP 120 + +D + LPGG+ GA+ F DST L+ + F + G++VAAICA PA V F Sbjct: 66 ACSAEAFDALALPGGVGGAQAFADSTALLALIDAFSQQGKLVAAICATPALVFAKQQKFV 125 Query: 121 IGNMTGFPTLKDKIPAEQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLLVGREKAHE 180 MT P D IP+E+ +RV + A LLTSQGPGTA++F L +I LL G E A Sbjct: 126 GARMTCHPNFFDHIPSERLSRQRVCYYATQHLLTSQGPGTALEFALAMIALLAGVELAQH 185 Query: 181 VASQLVM 187 VA+ +V+ Sbjct: 186 VAAPMVL 192 >1PDW-A nrPDB Length = 197 Score = 116 bits (290), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 77/190 (40%), Positives = 110/190 (57%), Gaps = 9/190 (4%) Query: 2 SASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLVE 61 S ALV LA G+EE E V +D++ R GIKVT A +A G + CSR V + DA L + Sbjct: 3 SKRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLA--GKDPVQCSRDVVICPDASLED 60 Query: 62 VA-DGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFP 120 +G YDV+VLPGG GA+ +S + E +K+ ++AAICA P T L+ H+I Sbjct: 61 AKKEGPYDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIAAICAGP-TALLAHEIGF 119 Query: 121 IGNMTGFPTLKDKI---PAEQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLLVGREK 177 +T P KDK+ + + RV D + LTS+GPGT+ +F L I++ L G+E Sbjct: 120 GSKVTTHPLAKDKMMNGGHYTYSENRVEKDGLI--LTSRGPGTSFEFALAIVEALNGKEV 177 Query: 178 AHEVASQLVM 187 A +V + LV+ Sbjct: 178 AAQVKAPLVL 187 >4GE0-A nrPDB Length = 194 Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 55/191 (28%), Positives = 99/191 (51%), Gaps = 14/191 (7%) Query: 7 VCL--APGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLVEVAD 64 VCL A G++E E + R I + + V + + + SR V++ A+ E+ Sbjct: 7 VCLFVADGTDEIEFSAPWGIFKRAEIPIDSVYVGENKDRLVKMSRDVEMYANRSYKEIPS 66 Query: 65 G-----EYDVIVLPGGIKGAECFRDSTLLVETVKQFHRS-GRIVAAICAAPATVLVPHDI 118 +YD+ ++PGG GA+ + + + VK+F++ + + ICA P T Sbjct: 67 ADDFAKQYDIAIIPGGGLGAKTLSTTPFVQQVVKEFYKKPNKWIGMICAGPLTAKTSG-- 124 Query: 119 FPIGNMTGFPTLKDKIP--AEQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLLVGRE 176 P +TG P+++ ++ ++LD+ VV + L+TSQGPGTA+ FGLK+++ + ++ Sbjct: 125 LPNKQITGHPSVRGQLEEGGYKYLDQPVVLEEN--LITSQGPGTAMLFGLKLLEQVASKD 182 Query: 177 KAHEVASQLVM 187 K + V L M Sbjct: 183 KYNAVYKSLSM 193 >4K2H-A nrPDB Length = 188 Score = 73.2 bits (178), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 54/180 (30%), Positives = 88/180 (48%), Gaps = 9/180 (5%) Query: 7 VCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLVEVADGE 66 V LAPG EE EA+ T+D+L R I V T + A + A+ + ++AD+ L E Sbjct: 9 VLLAPGFEEAEAIVTLDILRRLHIDVETLACAE--SRAVVSYHDIPMVADSTLSERQQAL 66 Query: 67 YDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFPIGNMTG 126 +D +VLPGG +G+ + ++ V + +G+++ I +A A VL H + Sbjct: 67 FDAVVLPGGPQGSANLAANPAVIAFVARHDAAGKLICPIASAAARVLGAHGLLKGRRYVC 126 Query: 127 FPTLKDKIPAEQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLLVG-----REKAHEV 181 L +P ++D VV D L++ +G G DF L + L+G RE+A + Sbjct: 127 SGDLWKAVPEGVYVDAPVVEDG--NLISGKGLGHVFDFALTLSARLLGDDAPVREQAEHI 184 >3L18-A nrPDB Length = 168 Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 9/173 (5%) Query: 2 SASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLVE 61 S L A G E+ E + + + G +V AS IT G + D E Sbjct: 2 SMKVLFLSADGFEDLELIYPLHRIKEEGHEVYVASFQRG---KITGKHGYSVNVDLTFEE 58 Query: 62 VADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFPI 121 V E+D +VLPGG K E R + V ++ + VA+IC P +L+ + Sbjct: 59 VDPDEFDALVLPGG-KAPEIVRLNEKAVMITRRMFEDDKPVASICHGP-QILISAKVLKG 116 Query: 122 GNMTGFPTLKDKI--PAEQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLL 172 T T++D + +W+D VV D ++S+ PG + + + LL Sbjct: 117 RRGTSTITIRDDVINAGAEWIDAEVVVDG--NWVSSRHPGDLYAWMREFVKLL 167 >1G2I-A nrPDB Length = 166 Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 44/169 (26%), Positives = 71/169 (42%), Gaps = 9/169 (5%) Query: 6 LVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLVEVADG 65 L A E+ E + L G +V AS IT G + D +V Sbjct: 4 LFLTANEFEDVELIYPYHRLKEEGHEVYIASFERG---TITGKHGYSVKVDLTFDKVNPE 60 Query: 66 EYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFPIGNMT 125 E+D +VLPGG + E R + V ++ G+ VA+IC P +L+ + T Sbjct: 61 EFDALVLPGG-RAPERVRLNEKAVSIARKMFSEGKPVASICHGP-QILISAGVLRGRKGT 118 Query: 126 GFPTLKDKI--PAEQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLL 172 +P +KD + +W+D VV D ++S+ P + + + LL Sbjct: 119 SYPGIKDDMINAGVEWVDAEVVVDG--NWVSSRVPADLYAWMREFVKLL 165 >2VRN-A nrPDB Length = 190 Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 5/121 (4%) Query: 52 KLLADAPLVEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPAT 111 K D + EV +YD ++LPGG + R ++ V+ + +G+ +AAIC P + Sbjct: 61 KYRVDHVVSEVQVSDYDGLLLPGGTVNPDKLRLEEGAMKFVRDMYDAGKPIAAICHGPWS 120 Query: 112 VLVPHDIFPIGNMTGFPTLKDK--IPAEQWLDKRVVWDARVKLLTSQGPGTAIDFGLKII 169 L I MT + +LK + + QW+D+ V D V +TS+ P F KI+ Sbjct: 121 -LSETGIAQGLKMTSWSSLKRELTLAGAQWVDEECVTDKGV--VTSRKPDDLPAFNKKIV 177 Query: 170 D 170 + Sbjct: 178 E 178 >1OI4-A nrPDB Length = 193 Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 8/175 (4%) Query: 1 MSASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRG-VKLLADAPL 59 +S V + E++E + D + G +V T + + +G + D + Sbjct: 22 LSKKIAVLITDEFEDSEFTSPADEFRKAGHEVIT--IEKQAGKTVKGKKGEASVTIDKSI 79 Query: 60 VEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIF 119 EV E+D ++LPGG + R V + F SG+ V AIC P +L+ D+ Sbjct: 80 DEVTPAEFDALLLPGG-HSPDYLRGDNRFVTFTRDFVNSGKPVFAICHGP-QLLISADVI 137 Query: 120 PIGNMTGF-PTLKD-KIPAEQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLL 172 +T P + D K ++ D+ VV D + +L+TS+ P F + + LL Sbjct: 138 RGRKLTAVKPIIIDVKNAGAEFYDQEVVVD-KDQLVTSRTPDDLPAFNREALRLL 191 >4OFW-A nrPDB Length = 387 Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 1/59 (1%) Query: 48 SRGVKLLADAPLVEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAIC 106 SRG +A EV +YD +V+PGG + E + +VE VK+F RSG+ +A+IC Sbjct: 61 SRGHNFTLNATFDEVDLSKYDGLVIPGG-RAPEYLALTASVVELVKEFSRSGKPIASIC 118 Score = 30.4 bits (67), Expect = 0.56, Method: Compositional matrix adjust. Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 2/105 (1%) Query: 27 RGGIKVTTASVASDGNLAITCSRGVKLLADAPLVEVADGEYDVIVLPGGIKGAECFRDST 86 + G + TA +G+ + G ++ YD +V+PGG + E + Sbjct: 233 KAGERCPTAIHDFEGDQTYSEKPGHTFALTTNFDDLVSSSYDALVIPGG-RAPEYLALNE 291 Query: 87 LLVETVKQFHRSGRIVAAICAAPATVLVPHDIFPIGNMTGFPTLK 131 ++ VK+F S + VA+IC +L + T +P +K Sbjct: 292 HVLNIVKEFMNSEKPVASICHG-QQILAAAGVLKGRKCTAYPAVK 335 >3MGK-A nrPDB Length = 211 Score = 34.3 bits (77), Expect = 0.038, Method: Compositional matrix adjust. Identities = 31/152 (20%), Positives = 61/152 (40%), Gaps = 8/152 (5%) Query: 37 VASDGNLAITCSRGVKLLADAPLVEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFH 96 ++SDG L + K+ + L + ++ +PGG E D + + Sbjct: 39 ISSDGGLVESSQ---KVRVETSLYTRDENIEKILFVPGGSGTREKVNDDNF-INFIGNMV 94 Query: 97 RSGRIVAAICAAPATVL---VPHDIFPIGNMTGFPTLKDKIPAEQWLDKRVVWDARVKLL 153 + + + ++C A + + + N F + ++ W+ K W + Sbjct: 95 KESKYIISVCTGSALLSKAGILNGKRATTNKRSFKWVTEQNEDVLWV-KEARWVKDGNIY 153 Query: 154 TSQGPGTAIDFGLKIIDLLVGREKAHEVASQL 185 TS G ID L I+ L+G+EKA E++ + Sbjct: 154 TSSGVSAGIDMTLGFIEDLIGKEKALEISRSI 185 >1N57-A nrPDB Length = 291 Score = 33.9 bits (76), Expect = 0.050, Method: Compositional matrix adjust. Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 4/102 (3%) Query: 49 RGVKLLADAPLVEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAA 108 R K LAD AD EY I +PGG +S + ++ ++ R V ++C Sbjct: 128 RNPKKLADVVASLNADSEYAAIFVPGGHGALIGLPESQDVAAALQWAIKNDRFVISLCHG 187 Query: 109 PATVL-VPHDIFPIGNMT--GFPTLKDK-IPAEQWLDKRVVW 146 PA L + H P+ + FP DK P ++ + W Sbjct: 188 PAAFLALRHGDNPLNGYSICAFPDAADKQTPEIGYMPGHLTW 229 >1OY1-A nrPDB Length = 228 Score = 32.0 bits (71), Expect = 0.17, Method: Compositional matrix adjust. Identities = 30/131 (22%), Positives = 54/131 (41%), Gaps = 24/131 (18%) Query: 2 SASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLVE 61 S + VC AP ++ + + +T ++ N+ I +R + PL + Sbjct: 35 SGAQAVCFAPDKQQVDVIN----------HLTGEAMTETRNVLIEAAR-ITRGEIRPLAQ 83 Query: 62 VADGEYDVIVLPGGIK-----------GAECFRDSTLLVETVKQFHRSGRIVAAICAAPA 110 E D +++PGG G+EC D L + H++G+ + +C APA Sbjct: 84 ADAAELDALIVPGGFGAAKNLSNFASLGSECTVDRELKA-LAQAMHQAGKPLGFMCIAPA 142 Query: 111 TVLVPHDIFPI 121 + D FP+ Sbjct: 143 MLPKIFD-FPL 152 >5GZJ-A nrPDB Length = 359 Score = 30.0 bits (66), Expect = 0.61, Method: Compositional matrix adjust. Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 97 RSGRIVAAICAAPATVLVPHDIFPIGNMTGFPTLKDKIPAEQWLDKRVVWDARVKLLTSQ 156 R G +A +CA PA D + + TGF +D + E +L+ D +++ Sbjct: 278 RLGPQLAHLCADPAAAAGRQDTLSVFDSTGF-AFEDALAMEVFLEAAAERDLGIRVGIEH 336 Query: 157 GPGTAID 163 PG A+D Sbjct: 337 HPGDALD 343 >5VJ7-A nrPDB Length = 476 Score = 29.6 bits (65), Expect = 0.87, Method: Compositional matrix adjust. Identities = 15/39 (38%), Positives = 22/39 (56%) Query: 84 DSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFPIG 122 D LL+E +K R+G+ VA I A PA + D+ +G Sbjct: 139 DDELLLEEIKGIKRNGKKVAIIGAGPAGLTCAADLAKMG 177 >5JFC-L nrPDB Length = 474 Score = 29.6 bits (65), Expect = 0.88, Method: Compositional matrix adjust. Identities = 15/39 (38%), Positives = 22/39 (56%) Query: 84 DSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFPIG 122 D LL+E +K R+G+ VA I A PA + D+ +G Sbjct: 139 DDELLLEEIKGIKRNGKKVAIIGAGPAGLTCAADLAKMG 177 >1JGT-A nrPDB Length = 513 Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust. Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 7/64 (10%) Query: 130 LKDKIPAEQWLDKRVVWDA-------RVKLLTSQGPGTAIDFGLKIIDLLVGREKAHEVA 182 LK + ++W+ + + DA R KL +G GT F ++D V ++ HE Sbjct: 415 LKRRHGRDKWVLRAAMADALPAETVNRPKLGVHEGSGTTSSFSRLLLDHGVAEDRVHEAK 474 Query: 183 SQLV 186 Q+V Sbjct: 475 RQVV 478 >4XF7-A nrPDB Length = 273 Score = 28.1 bits (61), Expect = 2.7, Method: Compositional matrix adjust. Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 6/34 (17%) Query: 40 DGNLAITCSRGVKLLADA-PLVEVADGEYDVIVL 72 DGN R +KLL A P+ E+ DGEYDV+++ Sbjct: 81 DGN-----RRRLKLLERASPIEELPDGEYDVLLM 109 >2K5I-A nrPDB Length = 162 Score = 27.7 bits (60), Expect = 3.0, Method: Compositional matrix adjust. Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%) Query: 55 ADAPLVEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGR 100 + PL+ DG Y++ L GG + FR L +E+ K+ SGR Sbjct: 76 GELPLILADDGTYEITKLNGGRRF--LFRMKNLGIESGKKIQVSGR 119 >5JZM-A nrPDB Length = 288 Score = 26.9 bits (58), Expect = 5.0, Method: Compositional matrix adjust. Identities = 18/86 (20%), Positives = 36/86 (41%), Gaps = 3/86 (3%) Query: 64 DGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHD--IFPI 121 D +Y + +PGG DS + ++ + + + ++C PA L D +F Sbjct: 148 DSDYIGVFIPGGHGALMGLPDSQEVKAVLQWAMKQNKFIISLCHGPAAFLAVGDDPLFAG 207 Query: 122 GNMTGFPTLKD-KIPAEQWLDKRVVW 146 + FP D + P+ ++ + W Sbjct: 208 YKIVAFPDEMDAQTPSIGYMPGHLTW 233 >4CZ1-A nrPDB Length = 209 Score = 26.9 bits (58), Expect = 5.7, Method: Compositional matrix adjust. Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 3/55 (5%) Query: 29 GIKVTTASVASDGNLAITCS---RGVKLLADAPLVEVADGEYDVIVLPGGIKGAE 80 G+ V + D LA + +L + L VADG+Y++I LP + A+ Sbjct: 144 GVDVPSVDPLDDKELAAHHQLFKHSIHILENVVLDHVADGDYELIALPLALSDAD 198 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5SY4-A nrPDB 260 3e-70 3OT1-B nrPDB 220 3e-58 4E08-A nrPDB 207 2e-54 3L18-A nrPDB 197 3e-51 1PDW-A nrPDB 196 4e-51 1G2I-A nrPDB 194 2e-50 4GE0-A nrPDB 194 2e-50 4K2H-A nrPDB 187 2e-48 1OI4-A nrPDB 176 4e-45 2VRN-A nrPDB 151 2e-37 4OFW-A nrPDB 115 1e-26 Sequences not found previously or not previously below threshold: 4D1Y-A nrPDB 53 1e-07 3F5D-A nrPDB 53 1e-07 3CNE-A nrPDB 52 1e-07 5JZM-A nrPDB 46 1e-05 1OY1-A nrPDB 45 3e-05 1SY7-A nrPDB 43 1e-04 3KKL-A nrPDB 40 5e-04 1N57-A nrPDB 40 7e-04 4LRU-A nrPDB 39 0.001 1QVW-A nrPDB 39 0.002 5XR3-A nrPDB 37 0.004 3D54-D nrPDB 37 0.006 2NV0-A nrPDB 36 0.008 1K9V-F nrPDB 35 0.021 1Q7R-A nrPDB 34 0.031 3L7N-A nrPDB 34 0.034 4WXY-B nrPDB 34 0.034 1KA9-H nrPDB 34 0.045 3R75-A nrPDB 32 0.13 6HGE-B nrPDB 32 0.17 2ISS-D nrPDB 32 0.26 1OX5-A nrPDB 31 0.26 2I5K-A nrPDB 30 0.60 1RY4-A nrPDB 30 0.69 3FIJ-A nrPDB 29 2.2 6QKI-A nrPDB 28 2.2 3TTT-A nrPDB 28 2.3 4NR0-A nrPDB 28 2.8 1XG3-A nrPDB 28 2.8 1O1Y-A nrPDB 28 2.9 4BIM-A nrPDB 28 3.2 2YWB-A nrPDB 27 5.0 5VC2-A nrPDB 27 6.3 4LCQ-A nrPDB 27 6.8 4ZJU-A nrPDB 27 7.9 >5SY4-A nrPDB Length = 199 Score = 260 bits (664), Expect = 3e-70, Method: Composition-based stats. Identities = 196/196 (100%), Positives = 196/196 (100%) Query: 1 MSASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLV 60 MSASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLV Sbjct: 4 MSASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLV 63 Query: 61 EVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFP 120 EVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFP Sbjct: 64 EVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFP 123 Query: 121 IGNMTGFPTLKDKIPAEQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLLVGREKAHE 180 IGNMTGFPTLKDKIPAEQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLLVGREKAHE Sbjct: 124 IGNMTGFPTLKDKIPAEQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLLVGREKAHE 183 Query: 181 VASQLVMAAGIYNYYE 196 VASQLVMAAGIYNYYE Sbjct: 184 VASQLVMAAGIYNYYE 199 >3OT1-B nrPDB Length = 208 Score = 220 bits (561), Expect = 3e-58, Method: Composition-based stats. Identities = 83/187 (44%), Positives = 109/187 (58%), Gaps = 2/187 (1%) Query: 1 MSASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLV 60 MS LV +A GSEE E V +D LVR G +VT A+V L + SRGV L A+ L Sbjct: 8 MSKRILVPVAHGSEEMETVIIVDTLVRAGFQVTMAAVGD--KLQVQGSRGVWLTAEQTLE 65 Query: 61 EVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFP 120 + +D + LPGG+ GA+ F DST L+ + F + G++VAAICA PA V F Sbjct: 66 ACSAEAFDALALPGGVGGAQAFADSTALLALIDAFSQQGKLVAAICATPALVFAKQQKFV 125 Query: 121 IGNMTGFPTLKDKIPAEQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLLVGREKAHE 180 MT P D IP+E+ +RV + A LLTSQGPGTA++F L +I LL G E A Sbjct: 126 GARMTCHPNFFDHIPSERLSRQRVCYYATQHLLTSQGPGTALEFALAMIALLAGVELAQH 185 Query: 181 VASQLVM 187 VA+ +V+ Sbjct: 186 VAAPMVL 192 >4E08-A nrPDB Length = 190 Score = 207 bits (527), Expect = 2e-54, Method: Composition-based stats. Identities = 84/190 (44%), Positives = 121/190 (63%), Gaps = 7/190 (3%) Query: 1 MSASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLV 60 MS SALV LAPG+EE E + D+L R GIKVT A + +G A+ CSR V++L D L Sbjct: 4 MSKSALVILAPGAEEMEFIIAADVLRRAGIKVTVAGL--NGGEAVKCSRDVQILPDTSLA 61 Query: 61 EVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFP 120 +VA ++DV+VLPGG+ G+ +S+L+ + ++ G ++AAICAAP TVL H + Sbjct: 62 QVASDKFDVVVLPGGLGGSNAMGESSLVGDLLRSQESGGGLIAAICAAP-TVLAKHGVAS 120 Query: 121 IGNMTGFPTLKDKIPAEQWL--DKRVVWDARVKLLTSQGPGTAIDFGLKIIDLLVGREKA 178 ++T +P++K ++ DK VV D L+TS+GPGTA +F LKI + L G+EK Sbjct: 121 GKSLTSYPSMKPQLVNNYSYVDDKTVVKDG--NLITSRGPGTAYEFALKIAEELAGKEKV 178 Query: 179 HEVASQLVMA 188 EVA L++A Sbjct: 179 QEVAKGLLVA 188 >3L18-A nrPDB Length = 168 Score = 197 bits (500), Expect = 3e-51, Method: Composition-based stats. Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 9/173 (5%) Query: 2 SASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLVE 61 S L A G E+ E + + + G +V AS IT G + D E Sbjct: 2 SMKVLFLSADGFEDLELIYPLHRIKEEGHEVYVASFQRGK---ITGKHGYSVNVDLTFEE 58 Query: 62 VADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFPI 121 V E+D +VLPGG K E R + V ++ + VA+IC P +L+ + Sbjct: 59 VDPDEFDALVLPGG-KAPEIVRLNEKAVMITRRMFEDDKPVASICHGP-QILISAKVLKG 116 Query: 122 GNMTGFPTLKDKI--PAEQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLL 172 T T++D + +W+D VV D ++S+ PG + + + LL Sbjct: 117 RRGTSTITIRDDVINAGAEWIDAEVVVDG--NWVSSRHPGDLYAWMREFVKLL 167 >1PDW-A nrPDB Length = 197 Score = 196 bits (499), Expect = 4e-51, Method: Composition-based stats. Identities = 77/190 (40%), Positives = 110/190 (57%), Gaps = 9/190 (4%) Query: 2 SASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLVE 61 S ALV LA G+EE E V +D++ R GIKVT A +A G + CSR V + DA L + Sbjct: 3 SKRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLA--GKDPVQCSRDVVICPDASLED 60 Query: 62 VA-DGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFP 120 +G YDV+VLPGG GA+ +S + E +K+ ++AAICA P T L+ H+I Sbjct: 61 AKKEGPYDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIAAICAGP-TALLAHEIGF 119 Query: 121 IGNMTGFPTLKDKI---PAEQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLLVGREK 177 +T P KDK+ + + RV D + LTS+GPGT+ +F L I++ L G+E Sbjct: 120 GSKVTTHPLAKDKMMNGGHYTYSENRVEKDGLI--LTSRGPGTSFEFALAIVEALNGKEV 177 Query: 178 AHEVASQLVM 187 A +V + LV+ Sbjct: 178 AAQVKAPLVL 187 >1G2I-A nrPDB Length = 166 Score = 194 bits (493), Expect = 2e-50, Method: Composition-based stats. Identities = 44/172 (25%), Positives = 71/172 (41%), Gaps = 9/172 (5%) Query: 3 ASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLVEV 62 L A E+ E + L G +V AS IT G + D +V Sbjct: 1 MKVLFLTANEFEDVELIYPYHRLKEEGHEVYIASFERG---TITGKHGYSVKVDLTFDKV 57 Query: 63 ADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFPIG 122 E+D +VLPGG + E R + V ++ G+ VA+IC P +L+ + Sbjct: 58 NPEEFDALVLPGG-RAPERVRLNEKAVSIARKMFSEGKPVASICHGP-QILISAGVLRGR 115 Query: 123 NMTGFPTLKDKI--PAEQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLL 172 T +P +KD + +W+D VV D ++S+ P + + + LL Sbjct: 116 KGTSYPGIKDDMINAGVEWVDAEVVVDG--NWVSSRVPADLYAWMREFVKLL 165 >4GE0-A nrPDB Length = 194 Score = 194 bits (492), Expect = 2e-50, Method: Composition-based stats. Identities = 52/192 (27%), Positives = 98/192 (51%), Gaps = 12/192 (6%) Query: 4 SALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLVEVA 63 + +A G++E E + R I + + V + + + SR V++ A+ E+ Sbjct: 6 KVCLFVADGTDEIEFSAPWGIFKRAEIPIDSVYVGENKDRLVKMSRDVEMYANRSYKEIP 65 Query: 64 DG-----EYDVIVLPGGIKGAECFRDSTLLVETVKQFHRS-GRIVAAICAAPATVLVPHD 117 +YD+ ++PGG GA+ + + + VK+F++ + + ICA P T Sbjct: 66 SADDFAKQYDIAIIPGGGLGAKTLSTTPFVQQVVKEFYKKPNKWIGMICAGPLTAKTSG- 124 Query: 118 IFPIGNMTGFPTLKDKI--PAEQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLLVGR 175 P +TG P+++ ++ ++LD+ VV + L+TSQGPGTA+ FGLK+++ + + Sbjct: 125 -LPNKQITGHPSVRGQLEEGGYKYLDQPVVLEE--NLITSQGPGTAMLFGLKLLEQVASK 181 Query: 176 EKAHEVASQLVM 187 +K + V L M Sbjct: 182 DKYNAVYKSLSM 193 >4K2H-A nrPDB Length = 188 Score = 187 bits (475), Expect = 2e-48, Method: Composition-based stats. Identities = 54/187 (28%), Positives = 88/187 (47%), Gaps = 9/187 (4%) Query: 3 ASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLVEV 62 V LAPG EE EA+ T+D+L R I V T + A + A+ + ++AD+ L E Sbjct: 5 KKVAVLLAPGFEEAEAIVTLDILRRLHIDVETLACAE--SRAVVSYHDIPMVADSTLSER 62 Query: 63 ADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFPIG 122 +D +VLPGG +G+ + ++ V + +G+++ I +A A VL H + Sbjct: 63 QQALFDAVVLPGGPQGSANLAANPAVIAFVARHDAAGKLICPIASAAARVLGAHGLLKGR 122 Query: 123 NMTGFPTLKDKIPAEQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLLVG-----REK 177 L +P ++D VV D L++ +G G DF L + L+G RE+ Sbjct: 123 RYVCSGDLWKAVPEGVYVDAPVVEDG--NLISGKGLGHVFDFALTLSARLLGDDAPVREQ 180 Query: 178 AHEVASQ 184 A + Sbjct: 181 AEHIYYP 187 >1OI4-A nrPDB Length = 193 Score = 176 bits (447), Expect = 4e-45, Method: Composition-based stats. Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 8/175 (4%) Query: 1 MSASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRG-VKLLADAPL 59 +S V + E++E + D + G +V T + + +G + D + Sbjct: 22 LSKKIAVLITDEFEDSEFTSPADEFRKAGHEVIT--IEKQAGKTVKGKKGEASVTIDKSI 79 Query: 60 VEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIF 119 EV E+D ++LPGG + R V + F SG+ V AIC P +L+ D+ Sbjct: 80 DEVTPAEFDALLLPGG-HSPDYLRGDNRFVTFTRDFVNSGKPVFAICHGP-QLLISADVI 137 Query: 120 PIGNMTGF-PTLKD-KIPAEQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLL 172 +T P + D K ++ D+ VV D + +L+TS+ P F + + LL Sbjct: 138 RGRKLTAVKPIIIDVKNAGAEFYDQEVVVD-KDQLVTSRTPDDLPAFNREALRLL 191 >2VRN-A nrPDB Length = 190 Score = 151 bits (381), Expect = 2e-37, Method: Composition-based stats. Identities = 43/175 (24%), Positives = 72/175 (41%), Gaps = 7/175 (4%) Query: 3 ASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITC--SRGVKLLADAPLV 60 + A G EE E + + G S+ ++ K D + Sbjct: 10 KKIAILAADGVEEIELTSPRAAIEAAGGTTELISLEPGEIQSMKGDIEPQEKYRVDHVVS 69 Query: 61 EVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFP 120 EV +YD ++LPGG + R ++ V+ + +G+ +AAIC P + L I Sbjct: 70 EVQVSDYDGLLLPGGTVNPDKLRLEEGAMKFVRDMYDAGKPIAAICHGPWS-LSETGIAQ 128 Query: 121 IGNMTGFPTLKDK--IPAEQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLLV 173 MT + +LK + + QW+D+ V D V +TS+ P F KI++ Sbjct: 129 GLKMTSWSSLKRELTLAGAQWVDEECVTDKGV--VTSRKPDDLPAFNKKIVEEFA 181 >4OFW-A nrPDB Length = 387 Score = 115 bits (287), Expect = 1e-26, Method: Composition-based stats. Identities = 45/193 (23%), Positives = 73/193 (37%), Gaps = 23/193 (11%) Query: 2 SASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITC-------------S 48 S + L+ E+ E + L GI V T + S Sbjct: 2 SRTVLILCGDYMEDYEVMVPFQALQAFGITVHTVCPGKKAGDSCPTAVHDFCGHQTYFES 61 Query: 49 RGVKLLADAPLVEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAA 108 RG +A EV +YD +V+PGG + E + +VE VK+F RSG+ +A+IC Sbjct: 62 RGHNFTLNATFDEVDLSKYDGLVIPGG-RAPEYLALTASVVELVKEFSRSGKPIASICHG 120 Query: 109 PATVLVPHDIFPIGNMTGFPTLKDKI--PAEQWLD----KRVVWDARVKLLTSQGPGTAI 162 +L D T + T+ + +W++ V D L+T+ Sbjct: 121 -QLILAAADTVNGRKCTAYATVGPSLVAAGAKWVEPITPDVCVVDG--SLITAATYEGHP 177 Query: 163 DFGLKIIDLLVGR 175 +F + L G+ Sbjct: 178 EFIQLFVKALGGK 190 Score = 102 bits (255), Expect = 8e-23, Method: Composition-based stats. Identities = 38/191 (19%), Positives = 66/191 (34%), Gaps = 25/191 (13%) Query: 2 SASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVAS-------------DGNLAITCS 48 + L E+ E L G +V +G+ + Sbjct: 195 NKRILFLCGDYMEDYEVKVPFQSLQALGCQVDAVCPEKKAGERCPTAIHDFEGDQTYSEK 254 Query: 49 RGVKLLADAPLVEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAA 108 G ++ YD +V+PGG + E + ++ VK+F S + VA+IC Sbjct: 255 PGHTFALTTNFDDLVSSSYDALVIPGG-RAPEYLALNEHVLNIVKEFMNSEKPVASICHG 313 Query: 109 PATVLVPHDIFPIGNMTGFPTLKDK--IPAEQWLD----KRVVWDARVKLLTSQG-PGTA 161 +L + T +P +K + WL+ R D L+T PG Sbjct: 314 -QQILAAAGVLKGRKCTAYPAVKLNVVLGGGTWLEPDPIDRCFTDG--NLVTGAAWPGH- 369 Query: 162 IDFGLKIIDLL 172 +F +++ LL Sbjct: 370 PEFVSQLMALL 380 >4D1Y-A nrPDB Length = 200 Score = 52.8 bits (125), Expect = 1e-07, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 61/179 (34%), Gaps = 12/179 (6%) Query: 1 MSASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLV 60 M+ V ++ GI +V+ I + G+ L+ D + Sbjct: 26 MAKKVAVLAVNPVNGCGLFQYLEAFFENGISYKVFAVSDTKE--IKTNSGMVLIVDDVIA 83 Query: 61 EVA--DGEYDVIVLPGGIKGA--ECFRDSTL---LVETVKQFHRSGRIVAAICAAPATVL 113 + + E+D +V G + + + L+E +K F G+++ CA A + Sbjct: 84 NLKGHEDEFDALVFSCGDAVPVFQQYANQPYNVDLMEVIKTFGEKGKMMIGHCAG-AMMF 142 Query: 114 VPHDIFPIGNMTGFPTLKDKIPAEQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLL 172 I + P K I D++ D T+Q T K+I+ L Sbjct: 143 DFTGITKGKKVAVHPLAKPAIQNGIATDEKSEIDG--NFFTAQDENTIWTMLPKVIEAL 199 >3F5D-A nrPDB Length = 206 Score = 52.8 bits (125), Expect = 1e-07, Method: Composition-based stats. Identities = 40/199 (20%), Positives = 75/199 (37%), Gaps = 21/199 (10%) Query: 3 ASALVCLAPGSEETEAVTTIDLL-VRGGIKVTTASVASDGNLAITCSRGVKLLADAPLVE 61 AL + + E V L R V T S+ + ++ G K D + Sbjct: 4 KKALFLILDQYADWEGVYLASALNQREDWSVHTVSL----DPIVSSIGGFKTSVDYIIG- 58 Query: 62 VADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFPI 121 + ++++V+ GG + D+ L+ VK + +AAIC L + + Sbjct: 59 LEPANFNLLVMIGGDSWSN---DNKKLLHFVKTAFQKNIPIAAIC-GAVDFLAKNGLLNN 114 Query: 122 GNMTG-----FPTLKDKIPAEQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLLVGRE 176 + TG + K P +++K+ V D L+T+ GTA +I ++ + Sbjct: 115 HSHTGNFVYLWKDYKQYKPISSFVEKQAVRDK--NLVTAN--GTAPIEFTNLILEMIDFD 170 Query: 177 KAHEVASQLVMAAGIYNYY 195 + + M Y +Y Sbjct: 171 TPENIEKMMYM--NRYGFY 187 >3CNE-A nrPDB Length = 175 Score = 52.0 bits (123), Expect = 1e-07, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 59/179 (32%), Gaps = 12/179 (6%) Query: 1 MSASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLV 60 M+ V ++ GI +V+ I + G+ L+ D + Sbjct: 1 MAKKVAVLAVNPVNGCGLFQYLEAFFENGISYKVFAVSDTKE--IKTNSGMVLIVDDVIA 58 Query: 61 EVA--DGEYDVIVLPGGIKGA-----ECFRDSTLLVETVKQFHRSGRIVAAICAAPATVL 113 + + E+D +V G + L+E +K F G+++ CA A + Sbjct: 59 NLKGHEDEFDALVFSCGDAVPVFQQYANQPYNVDLMEVIKTFGEKGKMMIGHCAG-AMMF 117 Query: 114 VPHDIFPIGNMTGFPTLKDKIPAEQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLL 172 I + P K I D++ D T+Q T K+I+ L Sbjct: 118 DFTGITKGKKVAVHPLAKPAIQNGIATDEKSEIDG--NFFTAQDENTIWTMLPKVIEAL 174 >5JZM-A nrPDB Length = 288 Score = 45.8 bits (107), Expect = 1e-05, Method: Composition-based stats. Identities = 23/144 (15%), Positives = 44/144 (30%), Gaps = 22/144 (15%) Query: 12 GSEETEAVTTIDLLVRGGIKVTTASV--------------ASDGNLAITCSRGVKLLADA 57 G+ E + + L + G A++ + Sbjct: 76 GNHPVETLLPMYHLDKAGFSFDIATLSGNPVKFEWWAMPREDQEVNGLYSKYQSSFRQPL 135 Query: 58 PLVEV------ADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPAT 111 L +V D +Y + +PGG DS + ++ + + + ++C PA Sbjct: 136 KLSDVIETALGEDSDYIGVFIPGGHGALMGLPDSQEVKAVLQWAMKQNKFIISLCHGPAA 195 Query: 112 VLVPHD--IFPIGNMTGFPTLKDK 133 L D +F + FP D Sbjct: 196 FLAVGDDPLFAGYKIVAFPDEMDA 219 >1OY1-A nrPDB Length = 228 Score = 44.7 bits (104), Expect = 3e-05, Method: Composition-based stats. Identities = 31/140 (22%), Positives = 52/140 (37%), Gaps = 30/140 (21%) Query: 3 ASALVCLA-----PGSEETEAVTTIDLLVRGGIKVTTASVASDG--------NLAITCSR 49 V L+ GSE EAV T+ + R G + + A+T +R Sbjct: 5 KKIGVILSGCGVYDGSEIHEAVLTLLAISRSGAQAVCFAPDKQQVDVINHLTGEAMTETR 64 Query: 50 GVKLLADA-------PLVEVADGEYDVIVLPGGIKGAECFRD----------STLLVETV 92 V + A PL + E D +++PGG A+ + L Sbjct: 65 NVLIEAARITRGEIRPLAQADAAELDALIVPGGFGAAKNLSNFASLGSECTVDRELKALA 124 Query: 93 KQFHRSGRIVAAICAAPATV 112 + H++G+ + +C APA + Sbjct: 125 QAMHQAGKPLGFMCIAPAML 144 >1SY7-A nrPDB Length = 715 Score = 42.8 bits (99), Expect = 1e-04, Method: Composition-based stats. Identities = 15/103 (14%), Positives = 33/103 (32%), Gaps = 3/103 (2%) Query: 2 SASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLVE 61 S + +A G + + + + + +T + G + L Sbjct: 534 SRRVAIIIADGYDNVAYDAAYAAI--SANQAIPLVIGPRRSK-VTAANGSTVQPHHHLEG 590 Query: 62 VADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAA 104 D I +PGG K AE + + +++ + + A Sbjct: 591 FRSTMVDAIFIPGGAKAAETLSKNGRALHWIREAFGHLKAIGA 633 >3KKL-A nrPDB Length = 244 Score = 40.4 bits (93), Expect = 5e-04, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 28/78 (35%), Gaps = 6/78 (7%) Query: 57 APLVEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPAT----- 111 EV +Y V G + + L + + + +G ++AAIC P Sbjct: 89 KTANEVNASDYKVFFASAGHGALFDYPKAKNLQDIASKIYANGGVIAAICHGPLLFDGLI 148 Query: 112 -VLVPHDIFPIGNMTGFP 128 + + +TGFP Sbjct: 149 DIKTTRPLIEGKAITGFP 166 >1N57-A nrPDB Length = 291 Score = 40.1 bits (92), Expect = 7e-04, Method: Composition-based stats. Identities = 30/148 (20%), Positives = 52/148 (35%), Gaps = 22/148 (14%) Query: 8 CLAPGSEETEAVTTIDLLVRGGIKVTTASVA-----------SDGNLAI--------TCS 48 + G+ E + + L G + A+++ + + + Sbjct: 68 LFSTGNHPIETLLPLYHLHAAGFEFEVATISGLMTKFEYWAMPHKDEKVMPFFEQHKSLF 127 Query: 49 RGVKLLADAPLVEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAA 108 R K LAD AD EY I +PGG +S + ++ ++ R V ++C Sbjct: 128 RNPKKLADVVASLNADSEYAAIFVPGGHGALIGLPESQDVAAALQWAIKNDRFVISLCHG 187 Query: 109 PATVLV-PHD--IFPIGNMTGFPTLKDK 133 PA L H ++ FP DK Sbjct: 188 PAAFLALRHGDNPLNGYSICAFPDAADK 215 >4LRU-A nrPDB Length = 239 Score = 38.9 bits (89), Expect = 0.001, Method: Composition-based stats. Identities = 24/185 (12%), Positives = 51/185 (27%), Gaps = 43/185 (23%) Query: 16 TEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLAD------------------- 56 EA+ ++ + G ++ AS ++ D Sbjct: 30 VEALHPFEVFRKKGYEIQLAS-----ETGTFGWDDHSVVPDFLNGEDKEIFDNVNSEFNV 84 Query: 57 -----APLVEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPAT 111 ++ +YD+ G + ++ L + + G +V+A+C PA Sbjct: 85 ALKNLKKASDLDPNDYDIFFGSAGHGTLFDYPNAKDLQKIATTVYDKGGVVSAVCHGPAI 144 Query: 112 V------LVPHDIFPIGNMTGFPTLKDKIPAEQ--------WLDKRVVWDARVKLLTSQG 157 + +TGF + + I K+V + +G Sbjct: 145 FENLNDPKTGEPLIKGKKITGFTDIGEDILGVTDIMKKGNLLTIKQVAEKEGATYIEPEG 204 Query: 158 PGTAI 162 P Sbjct: 205 PWDNF 209 >1QVW-A nrPDB Length = 237 Score = 38.5 bits (88), Expect = 0.002, Method: Composition-based stats. Identities = 21/150 (14%), Positives = 46/150 (30%), Gaps = 25/150 (16%) Query: 16 TEAVTTIDLLVRGGIKVTTAS---------------VASDGNLAITCSRGVKLLAD---- 56 EA+ + + G +V S + + ++ Sbjct: 29 VEALHPFNTFRKEGFEVDFVSETGKFGWDEHSLAKDFLNGQDETDFKNKDSDFNKTLAKI 88 Query: 57 APLVEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATV---- 112 EV +Y + + G + + L + + + +G +VAA+C PA Sbjct: 89 KTPKEVNADDYQIFMASAGHGTLFDYPKAKDLQDIASEIYANGGVVAAVCHGPAMFDGLT 148 Query: 113 --LVPHDIFPIGNMTGFPTLKDKIPAEQWL 140 + ++TGF + + I + Sbjct: 149 DKKTGRPLIEGKSITGFTDVGETIMGVDSI 178 >5XR3-A nrPDB Length = 300 Score = 37.4 bits (85), Expect = 0.004, Method: Composition-based stats. Identities = 24/152 (15%), Positives = 49/152 (32%), Gaps = 25/152 (16%) Query: 12 GSEETEAVTTIDLLVRGGIKVTTASV--------------ASDGNLAITCSRGVKLLADA 57 G+ E + + L+ G V A++ + ++ KL Sbjct: 76 GNHPVEMLLPLHHLMEAGFDVDVATLSGYPVKLELWAMPTEDEAVISTYNKLKEKLKQPK 135 Query: 58 PLVEV------ADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPAT 111 L +V D +Y + +PGG +S + +T+ + R + + PA Sbjct: 136 KLADVIKNELGPDSDYLSVFIPGGHAAVVGISESEDVQQTLDWALDNDRFIVTLXHGPAA 195 Query: 112 VLVPH-----DIFPIGNMTGFPTLKDKIPAEQ 138 +L ++ FP D+ + Sbjct: 196 LLSAGLNREKSPLEGYSVCVFPDSLDEGANIE 227 >3D54-D nrPDB Length = 213 Score = 36.6 bits (83), Expect = 0.006, Method: Composition-based stats. Identities = 11/65 (16%), Positives = 25/65 (38%), Gaps = 6/65 (9%) Query: 63 ADGEYDVIVLPGGIKGAECFR-----DSTLLVETVKQFHRSGRIVAAICAAPATVLVPHD 117 +Y++I+LPGG + R + + + G+++ IC +L+ Sbjct: 38 KLDDYELIILPGGFSYGDYLRPGAVAAREKIAFEIAKAAERGKLIMGICNG-FQILIEMG 96 Query: 118 IFPIG 122 + Sbjct: 97 LLKGA 101 >2NV0-A nrPDB Length = 196 Score = 36.2 bits (82), Expect = 0.008, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 21/47 (44%), Gaps = 1/47 (2%) Query: 63 ADGEYDVIVLPGGIKGA-ECFRDSTLLVETVKQFHRSGRIVAAICAA 108 E D ++LPGG D+ +E +++F G+ + CA Sbjct: 35 QLNEVDGLILPGGESTTMRRLIDTYQFMEPLREFAAQGKPMFGTCAG 81 >1K9V-F nrPDB Length = 201 Score = 35.1 bits (79), Expect = 0.021, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 36/101 (35%), Gaps = 13/101 (12%) Query: 37 VASDGNLAITCSRGVKLLADAPLVEVA--------DGEYDVIVLPGGIK---GAECFRDS 85 ++ + RGVK A +V+ + YD++ +PG G R++ Sbjct: 6 ISVGPGNIMNLYRGVK-RASENFEDVSIELVESPRNDLYDLLFIPGVGHFGEGMRRLREN 64 Query: 86 TLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFPIGNMTG 126 L++ V++ R V +C + + P Sbjct: 65 D-LIDFVRKHVEDERYVVGVCLGMQLLFEESEEAPGVKGLS 104 >1Q7R-A nrPDB Length = 219 Score = 34.3 bits (77), Expect = 0.031, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 1/47 (2%) Query: 63 ADGEYDVIVLPGGIKGA-ECFRDSTLLVETVKQFHRSGRIVAAICAA 108 D +VLPGG D L+E +KQF +G+ + CA Sbjct: 57 QLEGLDGLVLPGGESTTMRRLIDRYGLMEPLKQFAAAGKPMFGTCAG 103 >3L7N-A nrPDB Length = 236 Score = 34.3 bits (77), Expect = 0.034, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 57/166 (34%), Gaps = 28/166 (16%) Query: 49 RGVKLLADAPLVEVADG--EYDVIVLPGGIKGAECFR------DSTLLVETVKQFHRSGR 100 V + ++ ++D+++L GG + + D+ V+ +++ +S + Sbjct: 26 HDVSMTKVYRYEKLPKDIDDFDMLILMGGPQSPSSTKKEFPYYDAQAEVKLIQKAAKSEK 85 Query: 101 IVAAICAAPATVLVPHD-----------------IFPIGNMTGF-PTLKDKIPAEQWL-D 141 I+ +C + V + + G M + D + W D Sbjct: 86 IIVGVCLGAQLMGVAYGADYLHSPKKEIGNYLISLTEAGKMDSYLSDFSDDLLVGHWHGD 145 Query: 142 KRVVWDARVKLLTSQG-PGTAIDFGLKIIDLLVGREKAHEVASQLV 186 + D L SQG P I FG K E E+ + L+ Sbjct: 146 MPGLPDKAQVLAISQGCPRQIIKFGPKQYAFQCHLEFTPELVAALI 191 >4WXY-B nrPDB Length = 228 Score = 34.3 bits (77), Expect = 0.034, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 1/47 (2%) Query: 63 ADGEYDVIVLPGGIKGA-ECFRDSTLLVETVKQFHRSGRIVAAICAA 108 D +VLPGG D L+E +KQF +G+ + CA Sbjct: 66 QLEGLDGLVLPGGESTTMRRLIDRYGLMEPLKQFAAAGKPMFGTCAG 112 >1KA9-H nrPDB Length = 200 Score = 33.9 bits (76), Expect = 0.045, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 23/64 (35%), Gaps = 2/64 (3%) Query: 65 GEYDVIVLPGGIKGAECFRD--STLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFPIG 122 E D++VLPG + R + VE V++ G IC + + P Sbjct: 39 EEADLLVLPGQGHFGQVMRAFQESGFVERVRRHLERGLPFLGICVGMQVLYEGSEEAPGV 98 Query: 123 NMTG 126 G Sbjct: 99 RGLG 102 >3R75-A nrPDB Length = 645 Score = 32.4 bits (72), Expect = 0.13, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 28/79 (35%), Gaps = 11/79 (13%) Query: 60 VEVADGEYDVIVLPGGIKGAECFRDS--TLLVETVKQFHRSGRIVAAICAAPATVLVPHD 117 V YDV+V+ G D L ++ G+ A+C + H Sbjct: 480 DAVDLARYDVVVMGPGPGDPSDAGDPRIARLYAWLRHLIDEGKPFMAVC-------LSHQ 532 Query: 118 IFPIGNMTGFPTLKDKIPA 136 I + G P ++ ++P Sbjct: 533 ILNA--ILGIPLVRREVPN 549 >6HGE-B nrPDB Length = 409 Score = 32.0 bits (71), Expect = 0.17, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 44/119 (36%), Gaps = 9/119 (7%) Query: 2 SASALVCLAPG--SEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVK---LLAD 56 +ASAL L EE EA+ + + L R G + + + SR +L Sbjct: 257 NASALFILPDQDKMEEVEAMLSRETLNRWGDSLEFREIGELYLPKFSISRDYNLNDILLQ 316 Query: 57 APLVEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVP 115 + E + D+ GI GA S ++ + V G +A A T+L Sbjct: 317 LGIEEAFTSKADL----SGITGARNLAVSQVVHKAVLDVFEEGTEASAATAVKITLLSA 371 >2ISS-D nrPDB Length = 208 Score = 31.6 bits (70), Expect = 0.26, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 37/106 (34%), Gaps = 13/106 (12%) Query: 26 VRGGIKVTTASVASDGNLAITCSRGVKLLADAPLVEVAD--GEYDVIVLPGGIKGAECFR 83 +K+ V D + KL + +V++ + D ++LPGG Sbjct: 17 RGSHMKIGVLGVQGDVREHVEALH--KLGVETLIVKLPEQLDMVDGLILPGG-------- 66 Query: 84 DSTLLVETVKQFHRSGRIVAAICAA-PATVLVPHDIFPIGNMTGFP 128 +ST ++ +K+ ++V I P I + + Sbjct: 67 ESTTMIRILKEMDMDEKLVERINNGLPVFATCAGVILLAKRIKNYS 112 >1OX5-A nrPDB Length = 555 Score = 31.2 bits (69), Expect = 0.26, Method: Composition-based stats. Identities = 22/156 (14%), Positives = 46/156 (29%), Gaps = 12/156 (7%) Query: 50 GVKLLADAPLVEVADGEYDVIVLPG-GIKG--AECFRDSTLLVETVKQFHRSGRIVAAIC 106 G ++ + ++LPG G G + + + ++++ SG+ + IC Sbjct: 28 GYEVQLVKSPKDFNISGTSRLILPGVGNYGHFVDNL-FNRGFEKPIREYIESGKPIMGIC 86 Query: 107 AAPATVLVPHDIFPIGNMTGFPTLKDKIPAEQWLDKRVVWDARVKLLTSQG------PGT 160 + P + K + +K V + S+ P Sbjct: 87 VGLQALFAGSVESPKSTGLNYIDFK--LSRFDDSEKPVPEIGWNSCIPSENLFFGLDPYK 144 Query: 161 AIDFGLKIIDLLVGREKAHEVASQLVMAAGIYNYYE 196 F +L +K + +A Y E Sbjct: 145 RYYFVHSFAAILNSEKKKNLENDGWKIAKAKYGSEE 180 >2I5K-A nrPDB Length = 488 Score = 30.0 bits (66), Expect = 0.60, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 54/162 (33%), Gaps = 25/162 (15%) Query: 15 ETEAVTTIDLLVRGGIKVTTASVASDGNLAIT---CSRGVKL-----LADAPLVEVADGE 66 E E + + R G ++ + + AI + GV + L ++ + Sbjct: 327 EMEIIPNQKTITRDGHEINVLQLETACGAAIRHFDGAHGVVVPRSRFLPVKTCSDLLLVK 386 Query: 67 YDVIVLPGGI--KGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPH-----DIF 119 D+ L G F + L++ F + A I P V + H ++F Sbjct: 387 SDLFRLEHGSLKLDPSRFGPNP-LIKLGSHFKKVSGFNARIPHIPKIVELDHLTITGNVF 445 Query: 120 PIGNMT--------GFPTLKDKIPAEQWLDKRVVWDARVKLL 153 ++T K IP L+ VV +++L Sbjct: 446 LGKDVTLRGTVIIVCSDGHKIDIPNGSILEN-VVVTGNLQIL 486 >1RY4-A nrPDB Length = 128 Score = 30.0 bits (66), Expect = 0.69, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 35/100 (35%), Gaps = 6/100 (6%) Query: 2 SASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLVE 61 + + + + + A+ +D++ +V SD L G + A +E Sbjct: 4 TKAPSISIPHDFRQVSAIIDVDIVPETHRRVRLLKHGSDKPLGFYIRDGTSVRVTASGLE 63 Query: 62 VADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRI 101 G + ++PGG +ST L+ + I Sbjct: 64 KQPGIFISRLVPGG------LAESTGLLAVNDEVIEVNGI 97 >3FIJ-A nrPDB Length = 254 Score = 28.5 bits (62), Expect = 2.2, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 31/106 (29%), Gaps = 19/106 (17%) Query: 29 GIKVTTASVASDGNLAITCSRGVKLLA---DAPLVEVADGEYDVIVLPGGI--------- 76 G +VT AI G + D A D ++L GG Sbjct: 23 GHRVT--YTQQRYVDAIQKVGGFPIALPIDDPSTAVQAISLVDGLLLTGGQDITPQLYLE 80 Query: 77 -----KGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHD 117 GA + + V+ +G+ + AIC V V Sbjct: 81 EPSQEIGAYFPPRDSYEIALVRAALDAGKPIFAICRGMQLVNVALG 126 >6QKI-A nrPDB Length = 437 Score = 28.1 bits (61), Expect = 2.2, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 34/101 (33%), Gaps = 3/101 (2%) Query: 62 VADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFPI 121 V +GE+ + GG + E S + + L H + P+ Sbjct: 241 VTNGEFLAFMADGGYRRPE-LWLSDGWAAVTARGWEAPLYWRQAADGTWETLTLHGVQPV 299 Query: 122 GNM--TGFPTLKDKIPAEQWLDKRVVWDARVKLLTSQGPGT 160 + + +W KR+ +A +++ ++ P T Sbjct: 300 APYEPVCHISFYEADAYARWAGKRLPTEAEWEVVAARLPVT 340 >3TTT-A nrPDB Length = 753 Score = 28.1 bits (61), Expect = 2.3, Method: Composition-based stats. Identities = 12/99 (12%), Positives = 28/99 (28%), Gaps = 5/99 (5%) Query: 5 ALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLVEVAD 64 + L + + + L G+ +T G L A Sbjct: 603 VAILLNDEVRSADLLAILKALKAKGVHAKLLYSRMGE---VTADDGTVLPIAATFAGAPS 659 Query: 65 GEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVA 103 D +++P G D+ + + ++ + +A Sbjct: 660 LTVDAVIVPCGNIA--DIADNGDANYYLMEAYKHLKPIA 696 >4NR0-A nrPDB Length = 273 Score = 28.1 bits (61), Expect = 2.8, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 23/89 (25%), Gaps = 7/89 (7%) Query: 36 SVASDGNLAITCSRGVKLLADAPLVEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQF 95 ++A G + G L E Y+V+ G + Sbjct: 128 ALAKAGREMMKGRNGSLLTLSYLGAERTMPNYNVM-------GMAKASLEAGVRYLAGSL 180 Query: 96 HRSGRIVAAICAAPATVLVPHDIFPIGNM 124 G V A+ A P L I M Sbjct: 181 GAEGTRVNAVSAGPIRTLAASGIKSFRKM 209 >1XG3-A nrPDB Length = 295 Score = 28.1 bits (61), Expect = 2.8, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 7/89 (7%) Query: 35 ASVASDGNLAITCSRGVKLLADAPLVEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQ 94 A++ + L I + + A+ L+ Y I L GG A L + T+ Sbjct: 11 AALTKENPLQIVGT----INANHALL-AQRAGYQAIYLSGGGVAAGSLGLPDLGISTLDD 65 Query: 95 FHRSGRIVAAICAAPATVLVPHDIFPIGN 123 R + +C+ P +LV DI + Sbjct: 66 VLTDIRRITDVCSLP--LLVDADIGFGSS 92 >1O1Y-A nrPDB Length = 239 Score = 27.7 bits (60), Expect = 2.9, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 32/102 (31%), Gaps = 7/102 (6%) Query: 29 GIKVTTASVASDGNLAITCSRGVKLLADAPLVEVADGEYDVIVLPGGIKGAECFRDSTLL 88 +++ + D S +E EY ++VL GG GA L Sbjct: 20 HVEIEDLGMMEDIFREKNWSFDYLDTPKGEKLERPLEEYSLVVLLGGYMGAYEEEKYPFL 79 Query: 89 V---ETVKQFHRSGRIVAAICAAPATVLVP---HDIFPIGNM 124 + +++ + IC + +L ++ N Sbjct: 80 KYEFQLIEEILKKEIPFLGICLG-SQMLAKVLGASVYRGKNG 120 >4BIM-A nrPDB Length = 746 Score = 27.7 bits (60), Expect = 3.2, Method: Composition-based stats. Identities = 10/61 (16%), Positives = 20/61 (32%), Gaps = 7/61 (11%) Query: 55 ADAPLVEVADGEYDVIVLP-------GGIKGAECFRDSTLLVETVKQFHRSGRIVAAICA 107 D +D +V+ G + + + +R G+ VAA+ + Sbjct: 637 VDQTYSAADATAFDAVVVAEGAERVFSGKGAMSPLFPAGRPSQILTDGYRWGKPVAAVGS 696 Query: 108 A 108 A Sbjct: 697 A 697 >2YWB-A nrPDB Length = 503 Score = 27.0 bits (58), Expect = 5.0, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 20/56 (35%), Gaps = 10/56 (17%) Query: 56 DAPLVEVADGEYDVIVLPGGIKG---AECFRDSTLLVETVKQFHRSGRIVAAICAA 108 DAPL EV ++L GG + + R L SG + IC Sbjct: 32 DAPLEEVLKHRPQALILSGGPRSVFDPDAPRPDPRL-------FSSGLPLLGICYG 80 >5VC2-A nrPDB Length = 424 Score = 27.0 bits (58), Expect = 6.3, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 33/107 (30%), Gaps = 4/107 (3%) Query: 37 VASDGNLAITCSRGVKLLADAPLVEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFH 96 V+S + + RG +L + E + D + PG G + V + Sbjct: 228 VSSTTHKTLRGPRGGIILTN---DEEIAAKIDKAIFPGTQGGPLMHVIAAKAVGFKENLK 284 Query: 97 RSGRIVAAICAAPATVLVPHDIFPIGNMTGFPTLKDKIPAEQWLDKR 143 + A + + VL + + + +LDK Sbjct: 285 PEFKAYAKLVKSNMQVLAKALKEKNHKLVS-GGTSNHLLLMDFLDKP 330 >4LCQ-A nrPDB Length = 520 Score = 26.6 bits (57), Expect = 6.8, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 53/158 (33%), Gaps = 20/158 (12%) Query: 23 DLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLV--EVADGEYDVIVLPGGIKGAE 80 ++L++GG KV + ++ I + V++ D + D +V+PGGI Sbjct: 26 EILIKGG-KVVNEDCSFFSDVHIRGGKIVEVGPDLRVPPGARVIDATDRLVIPGGIDTHT 84 Query: 81 CFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFPIGNMTGFPTLKDKIPAEQ-- 138 + + V FH + AA+ +L ++ L K + Sbjct: 85 HMELAFMGTRAVDDFHIGTK--AALAGGTTMILDFVMTQKGQSLLEAYDLWRKTADPKVC 142 Query: 139 -----------WLDKRVVWDARVKLLTSQGPGTAIDFG 165 W D+ V D L +G + F Sbjct: 143 CDYSLHVAVTWWSDE--VKDEMRTLAQERGVNSFKMFM 178 >4ZJU-A nrPDB Length = 275 Score = 26.6 bits (57), Expect = 7.9, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 30/109 (27%), Gaps = 14/109 (12%) Query: 23 DLLVRGGIKV-------TTASVASDGNLAITCSRGVKLLADAPLVEVADGEYDVIVLPGG 75 D+ R G K+ + ++A + +G L E Y+V+ Sbjct: 116 DVTDRDGFKIAHDISAYSFVAMARAAKPLLQARQGCLLTLTYQGSERVMPNYNVM----- 170 Query: 76 IKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFPIGNM 124 G + G V AI A P L I M Sbjct: 171 --GMAKASLEAGVRYLASSLGVDGIRVNAISAGPIRTLAASGIKSFRKM 217 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.311 0.133 0.325 Lambda K H 0.267 0.0404 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 6,484,695 Number of Sequences: 36641 Number of extensions: 220820 Number of successful extensions: 811 Number of sequences better than 10.0: 53 Number of HSP's better than 10.0 without gapping: 42 Number of HSP's successfully gapped in prelim test: 39 Number of HSP's that attempted gapping in prelim test: 714 Number of HSP's gapped (non-prelim): 83 length of query: 196 length of database: 10,336,785 effective HSP length: 92 effective length of query: 104 effective length of database: 6,965,813 effective search space: 724444552 effective search space used: 724444552 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 56 (26.2 bits)