BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= Q43866
(584 letters)
Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
36,641 sequences; 10,336,785 total letters
Searching..................................................done
Results from round 1
Score E
Sequences producing significant alignments: (bits) Value
2AC1-A nrPDB 1123 0.0
2ADD-A nrPDB 609 e-175
3UGH-A nrPDB 431 e-121
1UYP-A nrPDB 140 1e-33
1Y4W-A nrPDB 136 2e-32
3PIG-A nrPDB 132 6e-31
3SC7-X nrPDB 105 6e-23
3U14-A nrPDB 91 1e-18
4EQV-A nrPDB 90 3e-18
5FMB-A nrPDB 65 7e-11
4FFH-A nrPDB 60 2e-09
4IED-A nrPDB 31 1.3
2Z1Q-A nrPDB 30 2.9
2IO3-A nrPDB 29 5.1
2XI1-A nrPDB 29 6.0
6CA8-A nrPDB 29 7.0
>2AC1-A nrPDB
Length = 541
Score = 1123 bits (2905), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 541/541 (100%), Positives = 541/541 (100%)
Query: 44 SPSVNQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDL 103
SPSVNQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDL
Sbjct: 1 SPSVNQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDL 60
Query: 104 INWDPHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDP 163
INWDPHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDP
Sbjct: 61 INWDPHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDP 120
Query: 164 YLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTS 223
YLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTS
Sbjct: 121 YLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTS 180
Query: 224 KDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDD 283
KDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDD
Sbjct: 181 KDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDD 240
Query: 284 TKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNE 343
TKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNE
Sbjct: 241 TKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNE 300
Query: 344 SSSVEDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSR 403
SSSVEDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSR
Sbjct: 301 SSSVEDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSR 360
Query: 404 LEVYGVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGLGPFGLMVLAS 463
LEVYGVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGLGPFGLMVLAS
Sbjct: 361 LEVYGVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGLGPFGLMVLAS 420
Query: 464 KNLEEYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINPHQPLSLR 523
KNLEEYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINPHQPLSLR
Sbjct: 421 KNLEEYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINPHQPLSLR 480
Query: 524 ALIDHSVVESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSAQI 583
ALIDHSVVESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSAQI
Sbjct: 481 ALIDHSVVESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSAQI 540
Query: 584 S 584
S
Sbjct: 541 S 541
>2ADD-A nrPDB
Length = 543
Score = 609 bits (1571), Expect = e-175, Method: Compositional matrix adjust.
Identities = 281/541 (51%), Positives = 389/541 (71%), Gaps = 14/541 (2%)
Query: 47 VNQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGN-IVWAHSTSTDLIN 105
+ QPYRTG+HFQPP NWMNDPNGPM+Y+G+YH FYQ+NP A +G+ I+W H+ S DL+N
Sbjct: 3 IEQPYRTGYHFQPPSNWMNDPNGPMLYQGVYHFFYQYNPYAATFGDVIIWGHAVSYDLVN 62
Query: 106 WDPHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYL 165
W PAI+P+ D CWSGSATILP P +LYTG D K++QVQ++A PKNLSDP+L
Sbjct: 63 WIHLDPAIYPTQEADSKSCWSGSATILPGNIPAMLYTGSDSKSRQVQDLAWPKNLSDPFL 122
Query: 166 REWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKD 225
REW K P NPL+ P G+ FRDP+TAWLG D WR+++G G+A Y S D
Sbjct: 123 REWVKHPKNPLITPP--EGVKDDCFRDPSTAWLGPDGVWRIVVGGDRDNNGMAFLYQSTD 180
Query: 226 FLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTK 285
F+ W++ +PL D +G WECPDF+PV +NG++TS +G ++HV+K +
Sbjct: 181 FVNWKRYDQPLSSADATGTWECPDFYPVPLNSTNGLDTSVYGGS---VRHVMKAGFE--G 235
Query: 286 HDYYTIGTYDRVKDKFVPDNGFKMDGTAP--RYDYGKYYASKTFFDSAKNRRILWGWTNE 343
HD+YTIGTY ++ F+P NG + G+ RYDYG++YASK+FFD AKNRR+LW W E
Sbjct: 236 HDWYTIGTYSPDRENFLPQNGLSLTGSTLDLRYDYGQFYASKSFFDDAKNRRVLWAWVPE 295
Query: 344 SSSVEDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSR 403
+ S DD+EKGW+G+Q+ PR +W+DR+GKQLIQWPV E+E LR QV NL+NK LK GS
Sbjct: 296 TDSQADDIEKGWAGLQSFPRALWIDRNGKQLIQWPVEEIEELRQNQV-NLQNKNLKPGSV 354
Query: 404 LEVYGVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGLGPFGLMVLAS 463
LE++G+ A+QADV + FK+ L++A+V++ + DPQ +C++ S + LGPFGL+ +AS
Sbjct: 355 LEIHGIAASQADVTISFKLEGLKEAEVLDTTLVDPQALCNERGASSRGALGPFGLLAMAS 414
Query: 464 KNLEEYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINPH-QPLSL 522
K+L+E ++++FR+F+ + +Y VLMCSD SRS+++ + D T+YGAFVDI+P + +SL
Sbjct: 415 KDLKEQSAIFFRVFQNQL--GRYSVLMCSDLSRSTVRSNIDTTSYGAFVDIDPRSEEISL 472
Query: 523 RALIDHSVVESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSAQ 582
R LIDHS++ESFG G+ CITSR+YPK + +HLF FN G Q+V + ++AWSM +A+
Sbjct: 473 RNLIDHSIIESFGAGGKTCITSRIYPKFVNNEEAHLFVFNNGTQNVKISEMSAWSMKNAK 532
Query: 583 I 583
Sbjct: 533 F 533
>3UGH-A nrPDB
Length = 546
Score = 431 bits (1107), Expect = e-121, Method: Compositional matrix adjust.
Identities = 231/534 (43%), Positives = 319/534 (59%), Gaps = 13/534 (2%)
Query: 52 RTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWDPHPP 111
RT FHFQP ++WM+DP+GP+ YKG YH FYQ+NP VWGN W H+ S DLI+W P
Sbjct: 19 RTAFHFQPERSWMSDPDGPIFYKGWYHFFYQYNPDNPVWGNNTWGHTVSRDLIHWLYLPL 78
Query: 112 AIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKS 171
A+ +D+ G +SGSAT LP+G+ ++LYTG+ + ++ ++A P +LSDP L EW K
Sbjct: 79 ALAADQWYDMQGVFSGSATCLPDGRIMMLYTGVTKEMVEMLSLAYPADLSDPLLVEWVKY 138
Query: 172 PLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDFLKWEK 231
P NP+++ A G++ + FRD +T W + WR+ IG+K + G+A+ Y +KDF ++
Sbjct: 139 PGNPILS--APPGVSPTEFRDASTGWYVSNGTWRIAIGAKYNTTGIAMVYETKDFKSFKL 196
Query: 232 SPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKHDYYTI 291
E LH +G+WEC D +PV+ G G+ETS G +KHVLK S+D+ + DYY I
Sbjct: 197 LEELLHAVPDTGLWECVDLYPVSTTGEKGLETSVNGPK---VKHVLKASIDEQQRDYYAI 253
Query: 292 GTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSSVEDDV 351
GTYD +K+ PDN + G RYD+GKYYASKTF+D K RR++W WT E S D
Sbjct: 254 GTYDLGTNKWTPDNPEEDVGIGLRYDWGKYYASKTFYDPKKQRRVVWAWTKELDSEVADR 313
Query: 352 EKGWSGIQTIPRKIWLD-RSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSRLEVYGVT 410
EKGW+ +QTIPR + LD ++G ++ WPV EVE LR K +GS + + T
Sbjct: 314 EKGWANVQTIPRTVLLDQKTGTNVLLWPVEEVESLRLSS-KEFSKVKAGAGSVVPLDVGT 372
Query: 411 AAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSG-LGPFGLMVLASKNLEEY 469
A Q D+ F++ IE D C+ + + G LGPFGL+V A++NL E
Sbjct: 373 ATQLDIIAEFEIDKEALEGTIE---ADMGYNCTTSGGAAERGVLGPFGLLVSATENLSEQ 429
Query: 470 TSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINPHQPLSLRALIDHS 529
T VYF I A+ + C D+SRSS D K G V + + ++R L+DHS
Sbjct: 430 TPVYFYI--AKGTDGNFKTFFCLDESRSSKASDVSKQVKGFTVPVLDGEKFTMRLLVDHS 487
Query: 530 VVESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSAQI 583
+VESF GR+CITSRVYP AI ++ LF FN + +L W MNSA I
Sbjct: 488 IVESFAQGGRSCITSRVYPTEAIYGAAKLFLFNNATGASITASLKIWEMNSAFI 541
>1UYP-A nrPDB
Length = 432
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/344 (29%), Positives = 175/344 (50%), Gaps = 43/344 (12%)
Query: 51 YRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWDPHP 110
++ +HF P WMNDPNG + +KG YH+FYQ+NP+ WGNI W H+ S DL++W P
Sbjct: 2 FKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLP 61
Query: 111 PAIFPSAPFDINGCWSGSATILPNGKPVILYTGI-DPKNQQVQNIAEPKNLSDPYLREWK 169
A++P + +G +SGSA + +GK ++YT DP + + + + +S+ L ++
Sbjct: 62 VALYPDD--ETHGVFSGSA-VEKDGKMFLVYTYYRDPTHNKGEKETQCVVMSENGL-DFV 117
Query: 170 KSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGS-KIHRRGLAITYTSKDFLK 228
K NP+++ G +A FRDP + +WR+++GS K + G + YTS D
Sbjct: 118 KYDGNPVISKPPEEGTHA--FRDPKVN--RSNGEWRMVLGSGKDEKIGRVLLYTSDDLFH 173
Query: 229 WEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKHDY 288
W K + D+ + ECPD + R G K +L S+ T
Sbjct: 174 W-KYEGAIFEDETTKEIECPD---LVRIGE---------------KDILIYSITSTNSVL 214
Query: 289 YTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNE--SSS 346
+++G K V G GT +YA++TFF + +R ++ GW +
Sbjct: 215 FSMGELKEGKLN-VEKRGLLDHGT-------DFYAAQTFFGT--DRVVVIGWLQSWLRTG 264
Query: 347 VEDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVREVERLRTKQV 390
+ +GW+G+ ++PR+++++ + +L PV E+ LR ++V
Sbjct: 265 LYPTKREGWNGVMSLPRELYVENN--ELKVKPVDELLALRKRKV 306
>1Y4W-A nrPDB
Length = 518
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 138/533 (25%), Positives = 216/533 (40%), Gaps = 81/533 (15%)
Query: 48 NQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWD 107
+QPYR +HF P KNWMNDPNG + + G YHLF+Q+NP G WGNI W H+ S DL +W+
Sbjct: 4 DQPYRGQYHFSPQKNWMNDPNGLLYHNGTYHLFFQYNPGGIEWGNISWGHAISEDLTHWE 63
Query: 108 PHPPAIFPSA-PFDINGCW-SGSATILPN--------GKP--VILYTG------IDPKNQ 149
P A+ D+ + SGSA N GK V +YT P Q
Sbjct: 64 EKPVALLARGFGSDVTEMYFSGSAVADVNNTSGFGKDGKTPLVAMYTSYYPVAQTLPSGQ 123
Query: 150 QVQNIAEPKNLS---DPYLREWKKSPLNPLMA-PDAVNGINASSFRDPTTAWLGQDKKWR 205
VQ + ++++ D L NP++ P + +FRDP W + +KW
Sbjct: 124 TVQEDQQSQSIAYSLDDGLTWTTYDAANPVIPNPPSPYEAEYQNFRDPFVFWHDESQKWV 183
Query: 206 VIIG-SKIHRRGLAITYTSKDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNG---V 261
V+ +++H+ LAI YTS + W+ E Y+ G+WECP + N V
Sbjct: 184 VVTSIAELHK--LAI-YTSDNLKDWKLVSEFGPYNAQGGVWECPGLVKLPLDSGNSTKWV 240
Query: 262 ETSSF---GEPNEILKHVLKISLDDTKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDY 318
TS G P + Y +G +D D + + TA D+
Sbjct: 241 ITSGLNPGGPPGTVGSGTQ-----------YFVGEFDGTTFTPDADTVYPGNSTANWMDW 289
Query: 319 G-KYYASKTFFDSAKNRRILWGWTNESSSVEDDVEKGWSGIQTIPRKIWLDRSGKQ--LI 375
G +YA+ + + N + GW N + W IPR + L G + L+
Sbjct: 290 GPDFYAAAGYNGLSLNDHVHIGWMNNWQYGANIPTYPWRSAMAIPRHMALKTIGSKATLV 349
Query: 376 QWPVREVERLRTKQVKNLRNKVLKSGSRLEVYGVTAAQADVEVLFKVRDLEKADVIEPSW 435
Q P + K + + ++ K+ + + FKV
Sbjct: 350 QQPQEAWSSISNK--RPIYSRTFKT-----LSEGSTNTTTTGETFKV------------- 389
Query: 436 TDPQLICSKMNVSVKSGLGPFGLMVLASKNLEEYTSVYFRIFKARQNSNKYVVLMCSDQS 495
++ S KS F + + AS N E T V + K + + + S
Sbjct: 390 --------DLSFSAKSKASTFAIALRASANFTEQTLVGYDFAKQQ-------IFLDRTHS 434
Query: 496 RSSLKEDNDKTTYGAFVDINPHQPLSLRALIDHSVVESFGGKGRACITSRVYP 548
++ + Y + + + L +D S VE FGG+G +T++++P
Sbjct: 435 GDVSFDETFASVYHGPLTPDSTGVVKLSIFVDRSSVEVFGGQGETTLTAQIFP 487
>3PIG-A nrPDB
Length = 526
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 171/392 (43%), Gaps = 47/392 (11%)
Query: 55 FHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWDPHPPAIF 114
+H W+NDPNG YKG +H+FYQ +P G WG + W H +STD++NW P
Sbjct: 43 YHIASNGGWINDPNGLCFYKGRWHVFYQLHPYGTQWGPMHWGHVSSTDMLNWKREPIMFA 102
Query: 115 PSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQ--------QVQNIAEPKNLSDPYLR 166
PS + +G +SGSA I NG YTG N QVQ A P N
Sbjct: 103 PSLEQEKDGVFSGSAVIDDNGDLRFYYTGHRWANGHDNTGGDWQVQMTALPDN------- 155
Query: 167 EWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDF 226
+ S M D +RDP W D + S +RG ++SKD
Sbjct: 156 DELTSATKQGMIIDCPTDKVDHHYRDPKV-WKTGDTWYMTFGVSSADKRGQMWLFSSKDM 214
Query: 227 LKWE------KSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKIS 280
++WE + P+P + M ECPDF P+ N F + +
Sbjct: 215 VRWEYERVLFQHPDPDVF-----MLECPDFSPIKDKDGNEKWVIGFSAMGSKPSGFMNRN 269
Query: 281 LDDTKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYG-KYYASKTFFDSAKNRRILWG 339
+ + Y IGT++ +F P+ F++ +D G YYA ++F + R+I++G
Sbjct: 270 VSNAG---YMIGTWEP-GGEFKPETEFRL------WDCGHNYYAPQSF--NVDGRQIVYG 317
Query: 340 WTN---ESSSVEDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVREVERLRTKQVKNLRNK 396
W + + +EDD GW G T+PR+I L G ++ PV E+E LR + +
Sbjct: 318 WMSPFVQPIPMEDD---GWCGQLTLPREITLGDDG-DVVTAPVAEMEGLREDTLDHGSVT 373
Query: 397 VLKSGSRLEVYGVTAAQADVEVLFKVRDLEKA 428
+ G ++ A + ++ + E+A
Sbjct: 374 LDMDGEQIIADDAEAVEIEMTIDLAASTAERA 405
>3SC7-X nrPDB
Length = 516
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 142/558 (25%), Positives = 223/558 (39%), Gaps = 105/558 (18%)
Query: 51 YRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWDPHP 110
YR +HF P + WMN+PNG + +HLF+Q NP VWGNI W H+TSTDL++W P
Sbjct: 28 YRPSYHFTPDQYWMNEPNGLIKIGSTWHLFFQHNPTANVWGNICWGHATSTDLMHWAHKP 87
Query: 111 PAIFPSAPFDING--CWSGSATILPN--------GKPVIL--YTGIDPKNQ-QVQNIAEP 157
AI D NG ++G+A PN P L +TG +Q Q Q +A
Sbjct: 88 TAI-----ADENGVEAFTGTAYYDPNNTSGLGDSANPPYLAWFTGYTTSSQTQDQRLA-- 140
Query: 158 KNLSDPYLREWKKSPLNPLM-----APDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKI 212
S W K NP++ AP + G S RDP + Q W +++
Sbjct: 141 --FSVDNGATWTKFQGNPIISTSQEAPHDITGGLES--RDPKVFFHRQSGNWIMVLAHGG 196
Query: 213 HRRGLAITYTSKDFLKWE-----KSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFG 267
+ L+ +TS D + W KS WE PD F + G+
Sbjct: 197 QDK-LSF-WTSADTINWTWQSDLKSTSINGLSSDITGWEVPDMFELPVEGTEETTWVVMM 254
Query: 268 EPNEIL----KHVLKISLDDTKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYY- 322
P E VL I+ G++D F D +D + D G+ +
Sbjct: 255 TPAEGSPAGGNGVLAIT-----------GSFD--GKSFTAD---PVDASTMWLDNGRDFD 298
Query: 323 --ASKTFFDSAKNRRILWGWTNESSSVEDDVEKGWSGIQTIPRKIWLDRSGKQ--LIQWP 378
S ++ RRI+ N S + W G+ + PR + L + G Q +Q P
Sbjct: 299 GALSWVNVPASDGRRIIAAVMNSYGS--NPPTTTWKGMLSFPRTLSLKKVGTQQHFVQQP 356
Query: 379 VREVERLRTKQVKNLRNKVLKSGSRLEVYGVTAAQADVEVLFKVRDLEKADVIEPSWTDP 438
+ E++ + T ++ L N+ + G L + + DV V F
Sbjct: 357 ITELDTISTS-LQILANQTITPGQTL-LSSIRGTALDVRVAFYPD--------------- 399
Query: 439 QLICSKMNVSVKSGLGPFGLMVLASKNLEEYTSVYFRIFKARQNSNKYVVLMCSDQSRSS 498
S ++++V+ G + + + +YT + R S + ++
Sbjct: 400 --AGSVLSLAVRKG--------ASEQTVIKYTQSDATLSVDRTESGDISYDPAAGGVHTA 449
Query: 499 -LKEDNDKTTYGAFVDINPHQPLSLRALIDHSVVESFGGKGRACITSRVYPK-LAIGKSS 556
L+ED +S+R L+D VE FGG+G A I+ ++P + G +
Sbjct: 450 KLEEDGTGL-------------VSIRVLVDTCSVEVFGGQGEAVISDLIFPSDSSDGLAL 496
Query: 557 HLFAFNYGYQSVDVLNLN 574
+ N QSVDV +++
Sbjct: 497 EVTGGNAVLQSVDVRSVS 514
>3U14-A nrPDB
Length = 535
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 122/440 (27%), Positives = 185/440 (42%), Gaps = 89/440 (20%)
Query: 52 RTGFHFQPPKNWMNDPNGPMIYKG--IYHLFYQWNPKGAVWGN-IVWAHSTSTDLINWDP 108
R HF P K WMN PNG K ++HL++Q+NP WG + W H+TS DL++WD
Sbjct: 36 RPLIHFTPEKGWMNAPNGLFYDKTAKLWHLYFQYNPNATAWGQPLYWGHATSNDLVHWDE 95
Query: 109 HPPAIFPSAPFDINGCWSGS-------------ATILPNGKPVILYTGIDPKNQQVQNIA 155
H AI P D G +SGS ++I PN + V +YT P N Q Q+IA
Sbjct: 96 HEIAIGPEH--DNEGIFSGSIVVDHNNTSGFFNSSIDPNQRIVAIYTNNIPDN-QTQDIA 152
Query: 156 EPKNLSDPYLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRR 215
+L Y + K NP++ ++++ FRDP W +W +++ SK
Sbjct: 153 --FSLDGGY--TFTKYENNPVI------DVSSNQFRDPKVFWHEDSNQW-IMVVSKSQEY 201
Query: 216 GLAITYTSKDFLKWEKSPEPLHYDDGSG----MWECPDFFPVTRFGSNGVETSSF----- 266
+ I + S + W L+ + SG +ECP V S+ + F
Sbjct: 202 KIQI-FGSANLKNW-----VLNSNFSSGYYGNQYECPGLIEVPIENSDKSKWVMFLAINP 255
Query: 267 GEPNEILKHVLKISLDDTKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGK-YYASK 325
G P L S++ Y +G +D +FVPD D D GK +YA +
Sbjct: 256 GSP-------LGGSINQ-----YFVGDFDGF--QFVPD-----DSQTRFVDIGKDFYAFQ 296
Query: 326 TFFDSAKNRRILWGWTNESSSVEDDVEKGWSGIQTIPRKIWL-----DRSGKQ--LIQWP 378
T F ++ + W + + W ++ R L + KQ LIQ P
Sbjct: 297 T-FSEVEHGVLGLAWASNWQYADQVPTNPWRSSTSLARNYTLRYVHTNAETKQLTLIQNP 355
Query: 379 V-----REVERLRTKQVKNLRNKVLKSGSRLEVYGVTAAQADVEVLFKVRDLEKADVIEP 433
V V++L+ K VK K +K+ + + D + FKV +L + P
Sbjct: 356 VLPDSINVVDKLKKKNVKLTNKKPIKTN-----FKGSTGLFDFNITFKVLNLN----VSP 406
Query: 434 SWT--DPQLICSKMNVSVKS 451
T D + ++N SV S
Sbjct: 407 GKTHFDILINSQELNSSVDS 426
>4EQV-A nrPDB
Length = 512
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 132/296 (44%), Gaps = 53/296 (17%)
Query: 56 HFQPPKNWMNDPNGPMIYK---GIYHLFYQWNPKGAVWGN-IVWAHSTSTDLINWDPHPP 111
HF P K WMNDPNG + Y +HL++Q+NP VWG + W H+TS DL NW+ P
Sbjct: 12 HFTPNKGWMNDPNG-LWYDEKDAKWHLYFQYNPNDTVWGTPLFWGHATSDDLTNWEDQPI 70
Query: 112 AIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQ----NIAEPKNLSDPY--- 164
AI P + +G +SGS + N IDP+ + V N E + Y
Sbjct: 71 AIAPKR--NDSGAFSGSMVVDYNNTSGFFNDTIDPRQRCVAIWTYNTPESEEQYISYSLD 128
Query: 165 ----LREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAIT 220
E++K NP++A N++ FRDP W +KW ++ +K + I
Sbjct: 129 GGYTFTEYQK---NPVLA------ANSTQFRDPKVFWYEPSQKW-IMTAAKSQDYKIEI- 177
Query: 221 YTSKDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKIS 280
Y+S D W+ + +ECP +E + +P++ V+ IS
Sbjct: 178 YSSDDLKSWKLESAFANEGFLGYQYECPGL----------IEVPTEQDPSKSY-WVMFIS 226
Query: 281 LD-----DTKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGK-YYASKTFFDS 330
++ + Y +G+++ + D + D+GK YYA +TFF++
Sbjct: 227 INPGAPAGGSFNQYFVGSFNGTHFE-------AFDNQSRVVDFGKDYYALQTFFNT 275
>5FMB-A nrPDB
Length = 665
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 137/585 (23%), Positives = 216/585 (36%), Gaps = 110/585 (18%)
Query: 51 YRTGFHFQPPKNWMNDPNGPMIYK---GIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWD 107
+R F P+ WMN P G +Y+ G H YQ +PK WGNI + S+D +W
Sbjct: 65 FRPKARFIAPEGWMNAPMG--LYQRADGSIHAGYQSHPKHIQWGNISQGAAYSSDFTSWT 122
Query: 108 PHPPA-----IFPSAPFDINGCWSGSATILP---NGKPVILYTGI----------DPKNQ 149
+ I+PS +DI G + GS I+ +G P ILYT + +
Sbjct: 123 DFNGSEGYKTIWPSQIYDIRGVFDGS--IIKEGIDGYPTILYTSTSFGPLGATLNEAEGT 180
Query: 150 QVQNIAEPKNLSDPYLREWKKSPLNPLMA--PDAVNGINASSFRDP-------------- 193
+ Q++A + +++ + NP++ P+ N + FRDP
Sbjct: 181 ETQSLAYTTDDGASWIKLGYGAGQNPVIYEWPE----TNLTGFRDPYVFQSPRLEALLAN 236
Query: 194 TTAWLGQDKKWRVIIGSKIHRRG----LAITYTSKDFLKWEKSPEPL---HYDDGSGMWE 246
TT+ I +H G L +T+ +F+KW PL Y + G W
Sbjct: 237 TTSITNATGDHFATISGGVHGDGARLFLYRQHTTGEFIKWTY-LGPLVTTGYKESYGEWS 295
Query: 247 CPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKHDYYTIGTYD----------- 295
+G N ET+ N D T D+ T GT
Sbjct: 296 G-------NYGIN-FETAGVTRLNPA-GAAWDNGSDTTAVDFVTFGTEQGRADHQNHWPL 346
Query: 296 -RVKDKFVPDNGF--KMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSSVEDDV- 351
D V DNG + + D+G+ YA + F R++ GW E +D+V
Sbjct: 347 WAAVDYEVRDNGSIEAVIAYSGVQDWGRSYAYAS-FPVEGYRQVSVGWIYED---DDNVI 402
Query: 352 ---EKGWSGIQTIPRKIW------LDRSGKQLIQ---WPVREVERLRTKQVKNLRNKVLK 399
+ G+ G T+ R ++ + S L + W + + V L +V+
Sbjct: 403 LAKQFGYQGAFTLFRDLFVKVVENVSPSTPGLFEQASWSTKNSTDGMSVTVTTLGQRVVP 462
Query: 400 SGSRLEVYGVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGL---GPF 456
E + V L V E A P + P + S + GL
Sbjct: 463 -----ETLAAYKGNSTVSTLAPVMLNESAAAYTPFSSQPTDRFYALTGSFEFGLNTTAKA 517
Query: 457 GLMVLASKNLEEYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINP 516
G VLAS+ EEYT ++F S V+ + S D + + +
Sbjct: 518 GFRVLASE--EEYTDIWF-----DPASENLTVVRTASSLIKSFGNDTELAKVKLYEIVGA 570
Query: 517 H-QPLSLRALIDHSVVESFGGKGRACITSRVYPKLAIGKSSHLFA 560
+ L+L +D SV+E + +++R YP LA + L A
Sbjct: 571 ESKTLNLTVFVDGSVIEIYAND-EVALSTRAYPWLANSTGAGLLA 614
>4FFH-A nrPDB
Length = 492
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 136/346 (39%), Gaps = 68/346 (19%)
Query: 55 FHFQPPKNWMNDPNGPMIYKGIYHLFY----QWNPKGAVWGNIVWAHSTSTDLINWDPHP 110
+H PP W+ +P P+ G Y L+Y Q N G W H+++TD + + H
Sbjct: 4 YHMTPPSGWLCNPQRPVTTHGAYQLYYLHSDQNNGPGG------WDHASTTDGVAFTHHG 57
Query: 111 PAIFPSAP-FDINGCWSGSATI-------LPNGKPVILYT----GIDPKNQQVQNIAEPK 158
+ P P F + WSGSA + G V L T G+ +Q +
Sbjct: 58 -TVMPLRPDFPV---WSGSAVVDTANTAGFGAGAVVALATQPTDGVRKYQEQYLYWSTDG 113
Query: 159 NLSDPYLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLA 218
+ L + + A NA FRDP W +W +IG R A
Sbjct: 114 GFTFTALPDPVIVNTDGRAATTPAEIENAEWFRDPKIHWDTARGEWVCVIG----RLRYA 169
Query: 219 ITYTSKDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKH-VL 277
YTS + W + + G ECPD F +T ++ +H VL
Sbjct: 170 AFYTSPNLRDWTLRRNFDYPNHALGGIECPDLFEITA--------------DDGTRHWVL 215
Query: 278 KISLDD------TKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRY-DYG-KYYASKTF-- 327
S+D + Y+T GT+D + F D P++ D+G +YA+ T+
Sbjct: 216 AASMDAYGIGLPMTYAYWT-GTWDGEQ--------FHADDLTPQWLDWGWDWYAAVTWPS 266
Query: 328 FDSAKNRRILWGWTN----ESSSVEDDVEKGWSGIQTIPRKIWLDR 369
D+ + +R+ W N + V D G++G +I R++ L R
Sbjct: 267 IDAPETKRLAIAWMNNWKYAARDVPTDASDGYNGQNSIVRELRLAR 312
>4IED-A nrPDB
Length = 254
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 23/86 (26%)
Query: 265 SFGEPNEILKHVLK----------ISLDDTKHDYYTIGTYDRVKDKFVPDNGFKM----- 309
SFG N+ +K + + L + K DYY + DR ++F P + FK+
Sbjct: 10 SFGNENQFMKEIFERKGLNGTFVVYDLKNDKIDYYNL---DRANERFYPASSFKIFNTLI 66
Query: 310 ---DGTAPRYDYGKYY--ASKTFFDS 330
+G D YY SK F DS
Sbjct: 67 GLENGIVKNVDEMFYYYDGSKVFLDS 92
>2Z1Q-A nrPDB
Length = 577
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 11/129 (8%)
Query: 301 FVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSSVEDD---VEKGWSG 357
+V D G ++ G Y Y + Y + + A+ RI G TNE + + + + G
Sbjct: 364 YVVDEGVQIHGG---YGYSQEYPIERAYRDARINRIFEG-TNEINRLLIPGMLLRRALKG 419
Query: 358 IQTIPRKIWLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLK-SGSRLEVYGVTAAQADV 416
+P R K+L++ E E L QV+NL+ L +G ++ YG + +
Sbjct: 420 --QLPLMQAAQRLQKELLEPSFEEPEDLELHQVQNLKKLALMVAGLAVQKYG-QGVEEEQ 476
Query: 417 EVLFKVRDL 425
EVL V D+
Sbjct: 477 EVLGAVADI 485
>2IO3-A nrPDB
Length = 232
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 26/54 (48%)
Query: 149 QQVQNIAEPKNLSDPYLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDK 202
Q +Q+ ++ K SD L EW + P P +NG ++ F ++ +DK
Sbjct: 153 QYLQDESKTKRNSDLNLLEWTHHSMKPHEIPQQLNGSDSGMFTCKYADYISRDK 206
>2XI1-A nrPDB
Length = 208
Score = 28.9 bits (63), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 6/77 (7%)
Query: 39 STNTKSPSVNQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHS 98
S+NT + + ++ GF +P P PM YKG L + KG + G +V++
Sbjct: 54 SSNTDTTNADEEEEVGFPVRP-----QVPLRPMTYKGAVDLSFFLKEKGGLEG-LVYSQR 107
Query: 99 TSTDLINWDPHPPAIFP 115
L W H FP
Sbjct: 108 EKEILDLWVYHTQGYFP 124
>6CA8-A nrPDB
Length = 751
Score = 28.9 bits (63), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 51/106 (48%), Gaps = 14/106 (13%)
Query: 267 GEPNEILKHVLKISLDDTKHDYYTIGTYDRVKDKFVPDNGFKMD-----GTAPRYDYGKY 321
G +E + ++K+ ++ ++TI Y++ K+ G+K+ GT+ ++
Sbjct: 138 GFLSEFVTPIVKVQKGSQEYSFFTIAEYEQWKEN-TNLLGWKIKYYKGLGTSTDREF--- 193
Query: 322 YASKTFFDSAKNRRILWGWTNESSSVEDDVEKGWSGIQTIPRKIWL 367
K +F KN +I++ WT + D ++ +S + RK+WL
Sbjct: 194 ---KQYFSDIKNHKIMFLWTGDRDG--DSIDMAFSKKRIEDRKLWL 234
Searching..................................................done
Results from round 2
Score E
Sequences producing significant alignments: (bits) Value
Sequences used in model and found again:
2AC1-A nrPDB 754 0.0
2ADD-A nrPDB 651 0.0
3UGH-A nrPDB 600 e-172
1Y4W-A nrPDB 417 e-117
3SC7-X nrPDB 384 e-107
3PIG-A nrPDB 380 e-105
5FMB-A nrPDB 357 1e-98
1UYP-A nrPDB 333 2e-91
3U14-A nrPDB 321 4e-88
4EQV-A nrPDB 285 4e-77
4FFH-A nrPDB 258 6e-69
Sequences not found previously or not previously below threshold:
5XH8-A nrPDB 115 4e-26
3LFI-A nrPDB 97 2e-20
3R4Z-A nrPDB 40 0.005
5A7V-A nrPDB 38 0.014
3P2N-A nrPDB 38 0.015
2YFT-A nrPDB 37 0.027
3LV4-A nrPDB 36 0.040
4AK7-A nrPDB 35 0.12
2UYT-A nrPDB 34 0.15
3QEF-A nrPDB 34 0.17
3GHG-A nrPDB 34 0.23
3ZXJ-A nrPDB 33 0.27
4B2O-A nrPDB 33 0.30
2WLX-A nrPDB 33 0.31
3C7F-A nrPDB 33 0.33
3IB3-A nrPDB 33 0.41
6EUG-A nrPDB 33 0.44
6FRW-A nrPDB 33 0.45
4D47-A nrPDB 33 0.50
5TA9-A nrPDB 32 0.62
3R67-A nrPDB 32 0.64
5A8D-A nrPDB 32 0.75
4NOV-A nrPDB 32 0.82
4KCA-A nrPDB 32 0.89
5HX2-G nrPDB 31 1.4
3OM6-A nrPDB 31 1.8
3KST-A nrPDB 31 1.8
3BYN-A nrPDB 30 2.2
6A8I-A nrPDB 30 2.6
5JOY-A nrPDB 30 2.8
3MUN-A nrPDB 30 2.9
4KC7-A nrPDB 30 3.1
4YHG-A nrPDB 29 5.4
3WPZ-A nrPDB 29 5.6
4N4B-A nrPDB 28 10.0
>2AC1-A nrPDB
Length = 541
Score = 754 bits (1946), Expect = 0.0, Method: Composition-based stats.
Identities = 541/541 (100%), Positives = 541/541 (100%)
Query: 44 SPSVNQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDL 103
SPSVNQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDL
Sbjct: 1 SPSVNQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDL 60
Query: 104 INWDPHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDP 163
INWDPHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDP
Sbjct: 61 INWDPHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDP 120
Query: 164 YLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTS 223
YLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTS
Sbjct: 121 YLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTS 180
Query: 224 KDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDD 283
KDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDD
Sbjct: 181 KDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDD 240
Query: 284 TKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNE 343
TKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNE
Sbjct: 241 TKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNE 300
Query: 344 SSSVEDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSR 403
SSSVEDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSR
Sbjct: 301 SSSVEDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSR 360
Query: 404 LEVYGVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGLGPFGLMVLAS 463
LEVYGVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGLGPFGLMVLAS
Sbjct: 361 LEVYGVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGLGPFGLMVLAS 420
Query: 464 KNLEEYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINPHQPLSLR 523
KNLEEYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINPHQPLSLR
Sbjct: 421 KNLEEYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINPHQPLSLR 480
Query: 524 ALIDHSVVESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSAQI 583
ALIDHSVVESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSAQI
Sbjct: 481 ALIDHSVVESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSAQI 540
Query: 584 S 584
S
Sbjct: 541 S 541
>2ADD-A nrPDB
Length = 543
Score = 651 bits (1678), Expect = 0.0, Method: Composition-based stats.
Identities = 281/541 (51%), Positives = 389/541 (71%), Gaps = 14/541 (2%)
Query: 47 VNQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGN-IVWAHSTSTDLIN 105
+ QPYRTG+HFQPP NWMNDPNGPM+Y+G+YH FYQ+NP A +G+ I+W H+ S DL+N
Sbjct: 3 IEQPYRTGYHFQPPSNWMNDPNGPMLYQGVYHFFYQYNPYAATFGDVIIWGHAVSYDLVN 62
Query: 106 WDPHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYL 165
W PAI+P+ D CWSGSATILP P +LYTG D K++QVQ++A PKNLSDP+L
Sbjct: 63 WIHLDPAIYPTQEADSKSCWSGSATILPGNIPAMLYTGSDSKSRQVQDLAWPKNLSDPFL 122
Query: 166 REWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKD 225
REW K P NPL+ P G+ FRDP+TAWLG D WR+++G G+A Y S D
Sbjct: 123 REWVKHPKNPLITP--PEGVKDDCFRDPSTAWLGPDGVWRIVVGGDRDNNGMAFLYQSTD 180
Query: 226 FLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTK 285
F+ W++ +PL D +G WECPDF+PV +NG++TS +G ++HV+K +
Sbjct: 181 FVNWKRYDQPLSSADATGTWECPDFYPVPLNSTNGLDTSVYGG---SVRHVMKAGFE--G 235
Query: 286 HDYYTIGTYDRVKDKFVPDNGFKMDGTA--PRYDYGKYYASKTFFDSAKNRRILWGWTNE 343
HD+YTIGTY ++ F+P NG + G+ RYDYG++YASK+FFD AKNRR+LW W E
Sbjct: 236 HDWYTIGTYSPDRENFLPQNGLSLTGSTLDLRYDYGQFYASKSFFDDAKNRRVLWAWVPE 295
Query: 344 SSSVEDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSR 403
+ S DD+EKGW+G+Q+ PR +W+DR+GKQLIQWPV E+E LR QV NL+NK LK GS
Sbjct: 296 TDSQADDIEKGWAGLQSFPRALWIDRNGKQLIQWPVEEIEELRQNQV-NLQNKNLKPGSV 354
Query: 404 LEVYGVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGLGPFGLMVLAS 463
LE++G+ A+QADV + FK+ L++A+V++ + DPQ +C++ S + LGPFGL+ +AS
Sbjct: 355 LEIHGIAASQADVTISFKLEGLKEAEVLDTTLVDPQALCNERGASSRGALGPFGLLAMAS 414
Query: 464 KNLEEYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINPH-QPLSL 522
K+L+E ++++FR+F+ + +Y VLMCSD SRS+++ + D T+YGAFVDI+P + +SL
Sbjct: 415 KDLKEQSAIFFRVFQNQL--GRYSVLMCSDLSRSTVRSNIDTTSYGAFVDIDPRSEEISL 472
Query: 523 RALIDHSVVESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSAQ 582
R LIDHS++ESFG G+ CITSR+YPK + +HLF FN G Q+V + ++AWSM +A+
Sbjct: 473 RNLIDHSIIESFGAGGKTCITSRIYPKFVNNEEAHLFVFNNGTQNVKISEMSAWSMKNAK 532
Query: 583 I 583
Sbjct: 533 F 533
>3UGH-A nrPDB
Length = 546
Score = 600 bits (1545), Expect = e-172, Method: Composition-based stats.
Identities = 231/534 (43%), Positives = 319/534 (59%), Gaps = 13/534 (2%)
Query: 52 RTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWDPHPP 111
RT FHFQP ++WM+DP+GP+ YKG YH FYQ+NP VWGN W H+ S DLI+W P
Sbjct: 19 RTAFHFQPERSWMSDPDGPIFYKGWYHFFYQYNPDNPVWGNNTWGHTVSRDLIHWLYLPL 78
Query: 112 AIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKS 171
A+ +D+ G +SGSAT LP+G+ ++LYTG+ + ++ ++A P +LSDP L EW K
Sbjct: 79 ALAADQWYDMQGVFSGSATCLPDGRIMMLYTGVTKEMVEMLSLAYPADLSDPLLVEWVKY 138
Query: 172 PLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDFLKWEK 231
P NP+++ A G++ + FRD +T W + WR+ IG+K + G+A+ Y +KDF ++
Sbjct: 139 PGNPILS--APPGVSPTEFRDASTGWYVSNGTWRIAIGAKYNTTGIAMVYETKDFKSFKL 196
Query: 232 SPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKHDYYTI 291
E LH +G+WEC D +PV+ G G+ETS G +KHVLK S+D+ + DYY I
Sbjct: 197 LEELLHAVPDTGLWECVDLYPVSTTGEKGLETSVNGP---KVKHVLKASIDEQQRDYYAI 253
Query: 292 GTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSSVEDDV 351
GTYD +K+ PDN + G RYD+GKYYASKTF+D K RR++W WT E S D
Sbjct: 254 GTYDLGTNKWTPDNPEEDVGIGLRYDWGKYYASKTFYDPKKQRRVVWAWTKELDSEVADR 313
Query: 352 EKGWSGIQTIPRKIWLD-RSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSRLEVYGVT 410
EKGW+ +QTIPR + LD ++G ++ WPV EVE LR K +GS + + T
Sbjct: 314 EKGWANVQTIPRTVLLDQKTGTNVLLWPVEEVESLRLSS-KEFSKVKAGAGSVVPLDVGT 372
Query: 411 AAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSG-LGPFGLMVLASKNLEEY 469
A Q D+ F++ IE D C+ + + G LGPFGL+V A++NL E
Sbjct: 373 ATQLDIIAEFEIDKEALEGTIE---ADMGYNCTTSGGAAERGVLGPFGLLVSATENLSEQ 429
Query: 470 TSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINPHQPLSLRALIDHS 529
T VYF I A+ + C D+SRSS D K G V + + ++R L+DHS
Sbjct: 430 TPVYFYI--AKGTDGNFKTFFCLDESRSSKASDVSKQVKGFTVPVLDGEKFTMRLLVDHS 487
Query: 530 VVESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSAQI 583
+VESF GR+CITSRVYP AI ++ LF FN + +L W MNSA I
Sbjct: 488 IVESFAQGGRSCITSRVYPTEAIYGAAKLFLFNNATGASITASLKIWEMNSAFI 541
>1Y4W-A nrPDB
Length = 518
Score = 417 bits (1072), Expect = e-117, Method: Composition-based stats.
Identities = 129/529 (24%), Positives = 208/529 (39%), Gaps = 69/529 (13%)
Query: 48 NQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWD 107
+QPYR +HF P KNWMNDPNG + + G YHLF+Q+NP G WGNI W H+ S DL +W+
Sbjct: 4 DQPYRGQYHFSPQKNWMNDPNGLLYHNGTYHLFFQYNPGGIEWGNISWGHAISEDLTHWE 63
Query: 108 PHPPAIFPSA-PFDINGC-WSGSATILPNGK----------PVILYTGI------DPKNQ 149
P A+ D+ +SGSA N V +YT P Q
Sbjct: 64 EKPVALLARGFGSDVTEMYFSGSAVADVNNTSGFGKDGKTPLVAMYTSYYPVAQTLPSGQ 123
Query: 150 QVQNIAEPKNLS---DPYLREWKKSPLNPLMA-PDAVNGINASSFRDPTTAWLGQDKKWR 205
VQ + ++++ D L NP++ P + +FRDP W + +KW
Sbjct: 124 TVQEDQQSQSIAYSLDDGLTWTTYDAANPVIPNPPSPYEAEYQNFRDPFVFWHDESQKWV 183
Query: 206 VIIG-SKIHRRGLAITYTSKDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETS 264
V+ +++H+ + YTS + W+ E Y+ G+WECP + N +
Sbjct: 184 VVTSIAELHKLAI---YTSDNLKDWKLVSEFGPYNAQGGVWECPGLVKLPLDSGNSTKWV 240
Query: 265 SFGEPNEILKHVLKISLDDTKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYG-KYYA 323
N Y +G +D D + + TA D+G +YA
Sbjct: 241 ITSGLNPGGP-----PGTVGSGTQYFVGEFDGTTFTPDADTVYPGNSTANWMDWGPDFYA 295
Query: 324 SKTFFDSAKNRRILWGWTNESSSVEDDVEKGWSGIQTIPRKIWLDRSGKQ--LIQWPVRE 381
+ + + N + GW N + W IPR + L G + L+Q P
Sbjct: 296 AAGYNGLSLNDHVHIGWMNNWQYGANIPTYPWRSAMAIPRHMALKTIGSKATLVQQPQEA 355
Query: 382 VERLRTKQVKNLRNKVLKSGSRLEVYGVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLI 441
+ K + + ++ K+ + + FKV
Sbjct: 356 WSSISNK--RPIYSRTFKT-----LSEGSTNTTTTGETFKVD------------------ 390
Query: 442 CSKMNVSVKSGLGPFGLMVLASKNLEEYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKE 501
++ S KS F + + AS N E T V + K + + + S +
Sbjct: 391 ---LSFSAKSKASTFAIALRASANFTEQTLVGYDFAKQQ-------IFLDRTHSGDVSFD 440
Query: 502 DNDKTTYGAFVDINPHQPLSLRALIDHSVVESFGGKGRACITSRVYPKL 550
+ + Y + + + L +D S VE FGG+G +T++++P
Sbjct: 441 ETFASVYHGPLTPDSTGVVKLSIFVDRSSVEVFGGQGETTLTAQIFPSS 489
>3SC7-X nrPDB
Length = 516
Score = 384 bits (985), Expect = e-107, Method: Composition-based stats.
Identities = 133/551 (24%), Positives = 214/551 (38%), Gaps = 91/551 (16%)
Query: 51 YRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWDPHP 110
YR +HF P + WMN+PNG + +HLF+Q NP VWGNI W H+TSTDL++W P
Sbjct: 28 YRPSYHFTPDQYWMNEPNGLIKIGSTWHLFFQHNPTANVWGNICWGHATSTDLMHWAHKP 87
Query: 111 PAIFPSAPFDINGCWSGSATILPNG--------KPVIL--YTGIDPKNQ-QVQNIAEPKN 159
AI + ++G+A PN P L +TG +Q Q Q +A
Sbjct: 88 TAIADENGVE---AFTGTAYYDPNNTSGLGDSANPPYLAWFTGYTTSSQTQDQRLA---- 140
Query: 160 LSDPYLREWKKSPLNPLM-----APDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHR 214
S W K NP++ AP + G S RDP + Q W +++
Sbjct: 141 FSVDNGATWTKFQGNPIISTSQEAPHDITGGLES--RDPKVFFHRQSGNWIMVLAHGGQD 198
Query: 215 RGLAITYTSKDFLKWE-----KSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEP 269
+ +TS D + W KS WE PD F + G+ P
Sbjct: 199 K--LSFWTSADTINWTWQSDLKSTSINGLSSDITGWEVPDMFELPVEGTEETTWVVMMTP 256
Query: 270 NEILKHVLKISLDDTKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYY---ASKT 326
E S G++D P +D + D G+ + S
Sbjct: 257 AEG-------SPAGGNGVLAITGSFDGKSFTADP-----VDASTMWLDNGRDFDGALSWV 304
Query: 327 FFDSAKNRRILWGWTNESSSVEDDVEKGWSGIQTIPRKIWLDRSGKQ--LIQWPVREVER 384
++ RRI+ N S + W G+ + PR + L + G Q +Q P+ E++
Sbjct: 305 NVPASDGRRIIAAVMNSYGS--NPPTTTWKGMLSFPRTLSLKKVGTQQHFVQQPITELDT 362
Query: 385 LRTKQVKNLRNKVLKSGSRLEVYGVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSK 444
+ T ++ L N+ + G L + + DV V F S
Sbjct: 363 ISTS-LQILANQTITPGQTL-LSSIRGTALDVRVAFYPD-----------------AGSV 403
Query: 445 MNVSVKSGLGPFGLMVLASKNLEEYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDND 504
++++V+ G + + + +YT + R S + ++ E+
Sbjct: 404 LSLAVRKG--------ASEQTVIKYTQSDATLSVDRTESGDISYDPAAGGVHTAKLEE-- 453
Query: 505 KTTYGAFVDINPHQPLSLRALIDHSVVESFGGKGRACITSRVYPK-LAIGKSSHLFAFNY 563
+ +S+R L+D VE FGG+G A I+ ++P + G + + N
Sbjct: 454 ----------DGTGLVSIRVLVDTCSVEVFGGQGEAVISDLIFPSDSSDGLALEVTGGNA 503
Query: 564 GYQSVDVLNLN 574
QSVDV +++
Sbjct: 504 VLQSVDVRSVS 514
>3PIG-A nrPDB
Length = 526
Score = 380 bits (974), Expect = e-105, Method: Composition-based stats.
Identities = 133/543 (24%), Positives = 208/543 (38%), Gaps = 74/543 (13%)
Query: 48 NQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWD 107
N + +H W+NDPNG YKG +H+FYQ +P G WG + W H +STD++NW
Sbjct: 36 NNRWYPKYHIASNGGWINDPNGLCFYKGRWHVFYQLHPYGTQWGPMHWGHVSSTDMLNWK 95
Query: 108 PHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQ--------QVQNIAEPKN 159
P PS + +G +SGSA I NG YTG N QVQ A P N
Sbjct: 96 REPIMFAPSLEQEKDGVFSGSAVIDDNGDLRFYYTGHRWANGHDNTGGDWQVQMTALPDN 155
Query: 160 LSDPYLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAI 219
+ S M D +RDP W D + S +RG
Sbjct: 156 -------DELTSATKQGMIIDCPTDKVDHHYRDPKV-WKTGDTWYMTFGVSSADKRGQMW 207
Query: 220 TYTSKDFLKWEKSPE-PLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLK 278
++SKD ++WE H D M ECPDF P+ N F +
Sbjct: 208 LFSSKDMVRWEYERVLFQHPDPDVFMLECPDFSPIKDKDGNEKWVIGFSAMGSKPSGFMN 267
Query: 279 ISLDDTKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYG-KYYASKTFFDSAKNRRIL 337
++ + Y IGT++ +F P+ F++ +D G YYA ++F + R+I+
Sbjct: 268 RNVSNAG---YMIGTWEPGG-EFKPETEFRL------WDCGHNYYAPQSF--NVDGRQIV 315
Query: 338 WGWTNESSSVEDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVREVERLRTKQVKNLRNKV 397
+GW + + GW G T+PR+I L G ++ PV E+E LR + + +
Sbjct: 316 YGWMSPFVQPIPMEDDGWCGQLTLPREITLGDDG-DVVTAPVAEMEGLREDTLDHGSVTL 374
Query: 398 LKSGSRLEVYGVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGLGPFG 457
G ++ A + ++ + E+A G
Sbjct: 375 DMDGEQIIADDAEAVEIEMTIDLAASTAERA----------------------------G 406
Query: 458 LMVLASKNLEEYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINPH 517
L + A+++ YT V + R ++ + R++ D + +
Sbjct: 407 LKIHATEDGA-YTYVAYDGQIGRVVVDRQAMANGDRGYRAAPLTDAELAS---------- 455
Query: 518 QPLSLRALIDHSVVESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWS 577
L LR +D VE + G ++S Y + S+ V +L
Sbjct: 456 GKLDLRVFVDRGSVEVYVNGGHQVLSSYSYAS----EGPRAIKLVAESGSLKVDSLKLHH 511
Query: 578 MNS 580
M S
Sbjct: 512 MKS 514
>5FMB-A nrPDB
Length = 665
Score = 357 bits (915), Expect = 1e-98, Method: Composition-based stats.
Identities = 135/594 (22%), Positives = 207/594 (34%), Gaps = 93/594 (15%)
Query: 51 YRTGFHFQPPKNWMNDPNGPM-IYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWDPH 109
+R F P+ WMN P G G H YQ +PK WGNI + S+D +W
Sbjct: 65 FRPKARFIAPEGWMNAPMGLYQRADGSIHAGYQSHPKHIQWGNISQGAAYSSDFTSWTDF 124
Query: 110 PPA-----IFPSAPFDINGCWSGSATILP-NGKPVILYTGI----------DPKNQQVQN 153
+ I+PS +DI G + GS +G P ILYT + + + Q+
Sbjct: 125 NGSEGYKTIWPSQIYDIRGVFDGSIIKEGIDGYPTILYTSTSFGPLGATLNEAEGTETQS 184
Query: 154 IAEPKNLSDPYLREWKKSPLNPLMAPDAVNGINASSFRDPTTA--------------WLG 199
+A + +++ + NP++ N + FRDP
Sbjct: 185 LAYTTDDGASWIKLGYGAGQNPVIYEWP--ETNLTGFRDPYVFQSPRLEALLANTTSITN 242
Query: 200 QDKKWRVIIGSKIHRRG----LAITYTSKDFLKWEKSPEPL---HYDDGSGMWECPDFFP 252
I +H G L +T+ +F+KW PL Y + G W
Sbjct: 243 ATGDHFATISGGVHGDGARLFLYRQHTTGEFIKWT-YLGPLVTTGYKESYGEWSG----- 296
Query: 253 VTRFGSNGVETSSFGEPNEILKHVLKISLDDTKHDYYTIGTYDR------------VKDK 300
+G N ET+ N D T D+ T GT D
Sbjct: 297 --NYGIN-FETAGVTRLNPA-GAAWDNGSDTTAVDFVTFGTEQGRADHQNHWPLWAAVDY 352
Query: 301 FVPDNGF--KMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSS-VEDDVEKGWSG 357
V DNG + + D+G+ YA +F R++ GW E V + G+ G
Sbjct: 353 EVRDNGSIEAVIAYSGVQDWGRSYAYASF-PVEGYRQVSVGWIYEDDDNVILAKQFGYQG 411
Query: 358 IQTIPRKIWLD------RSGKQLIQ---WPVREVERLRTKQVKNLRNKVLKSGSRLEVYG 408
T+ R +++ S L + W + + V L +V+ E
Sbjct: 412 AFTLFRDLFVKVVENVSPSTPGLFEQASWSTKNSTDGMSVTVTTLGQRVVP-----ETLA 466
Query: 409 VTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGL---GPFGLMVLASKN 465
+ V L V E A P + P + S + GL G VLAS+
Sbjct: 467 AYKGNSTVSTLAPVMLNESAAAYTPFSSQPTDRFYALTGSFEFGLNTTAKAGFRVLASE- 525
Query: 466 LEEYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINPH-QPLSLRA 524
EEYT ++F S V+ + S D + + + + L+L
Sbjct: 526 -EEYTDIWF-----DPASENLTVVRTASSLIKSFGNDTELAKVKLYEIVGAESKTLNLTV 579
Query: 525 LIDHSVVESFGGKGRACITSRVYPKLAIGKSSHLFA-FNYGYQSVDVLNLNAWS 577
+D SV+E + +++R YP LA + L A V V L W
Sbjct: 580 FVDGSVIEIYAND-EVALSTRAYPWLANSTGAGLLADGTTAGDVVGVSGLELWD 632
>1UYP-A nrPDB
Length = 432
Score = 333 bits (852), Expect = 2e-91, Method: Composition-based stats.
Identities = 106/406 (26%), Positives = 188/406 (46%), Gaps = 54/406 (13%)
Query: 51 YRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWDPHP 110
++ +HF P WMNDPNG + +KG YH+FYQ+NP+ WGNI W H+ S DL++W P
Sbjct: 2 FKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLP 61
Query: 111 PAIFPSAPFDINGCWSGSATILPNGKPVILYTGI-DPKNQQVQNIAEPKNLSDPYLREWK 169
A++P + +G +SGSA + +GK ++YT DP + + + + +S+ L ++
Sbjct: 62 VALYPDD--ETHGVFSGSA-VEKDGKMFLVYTYYRDPTHNKGEKETQCVVMSENGL-DFV 117
Query: 170 KSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGS-KIHRRGLAITYTSKDFLK 228
K NP+++ G +A FRDP + +WR+++GS K + G + YTS D
Sbjct: 118 KYDGNPVISKPPEEGTHA--FRDPKVN--RSNGEWRMVLGSGKDEKIGRVLLYTSDDLFH 173
Query: 229 WEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKHDY 288
W+ + D+ + ECPD + K +L S+ T
Sbjct: 174 WK-YEGAIFEDETTKEIECPDLVRI------------------GEKDILIYSITSTNSVL 214
Query: 289 YTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNES--SS 346
+++G K V G GT +YA++TFF + +R ++ GW +
Sbjct: 215 FSMGELKEGKLN-VEKRGLLDHGT-------DFYAAQTFFGT--DRVVVIGWLQSWLRTG 264
Query: 347 VEDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSRLEV 406
+ +GW+G+ ++PR+++++ + +L PV E+ LR ++V S +
Sbjct: 265 LYPTKREGWNGVMSLPRELYVENN--ELKVKPVDELLALRKRKVFETAK------SGTFL 316
Query: 407 YGVTAAQADVEVLFK-----VRDLEKADVIEPSWTDPQLICSKMNV 447
V ++ F E +V+ D ++ + +
Sbjct: 317 LDVKENSYEIVCEFSGEIELRMGNESEEVVITKSRDELIVDTTRSG 362
>3U14-A nrPDB
Length = 535
Score = 321 bits (823), Expect = 4e-88, Method: Composition-based stats.
Identities = 125/525 (23%), Positives = 197/525 (37%), Gaps = 87/525 (16%)
Query: 52 RTGFHFQPPKNWMNDPNGPMIYKGI--YHLFYQWNPKGAVWG-NIVWAHSTSTDLINWDP 108
R HF P K WMN PNG K +HL++Q+NP WG + W H+TS DL++WD
Sbjct: 36 RPLIHFTPEKGWMNAPNGLFYDKTAKLWHLYFQYNPNATAWGQPLYWGHATSNDLVHWDE 95
Query: 109 HPPAIFPSAPFDINGCWSGS-------------ATILPNGKPVILYTGIDPKNQQVQNIA 155
H AI P D G +SGS ++I PN + V +YT P N Q Q+IA
Sbjct: 96 HEIAIGPEH--DNEGIFSGSIVVDHNNTSGFFNSSIDPNQRIVAIYTNNIPDN-QTQDIA 152
Query: 156 EPKNLSDPYLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRR 215
S + K NP++ ++++ FRDP W +W +++ SK
Sbjct: 153 ----FSLDGGYTFTKYENNPVI------DVSSNQFRDPKVFWHEDSNQWIMVV-SKSQEY 201
Query: 216 GLAITYTSKDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKH 275
+ I + S + W + +ECP V S+ + F N
Sbjct: 202 KIQI-FGSANLKNWVLNSNF-SSGYYGNQYECPGLIEVPIENSDKSKWVMFLAINPG--- 256
Query: 276 VLKISLDDTKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYG-KYYASKTFFDSAKNR 334
S + Y +G +D +FVPD D D G +YA +TF ++
Sbjct: 257 ----SPLGGSINQYFVGDFDG--FQFVPD-----DSQTRFVDIGKDFYAFQTF-SEVEHG 304
Query: 335 RILWGWTNESSSVEDDVEKGWSGIQTIPRKIWL-----DRSGKQ--LIQWPV-----REV 382
+ W + + W ++ R L + KQ LIQ PV V
Sbjct: 305 VLGLAWASNWQYADQVPTNPWRSSTSLARNYTLRYVHTNAETKQLTLIQNPVLPDSINVV 364
Query: 383 ERLRTKQVKNLRNKVLKSGSRLEVYGVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLIC 442
++L+ K VK K +K+ + + D + FKV +L + D +
Sbjct: 365 DKLKKKNVKLTNKKPIKTN-----FKGSTGLFDFNITFKVLNLNVSPGKTHF--DILINS 417
Query: 443 SKMNVSVKSGLGPFGLMVLASKNLEEYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKED 502
++N SV S F + + F I + N R D
Sbjct: 418 QELNSSVDSIKIGF-----------DSSQSSFYIDRHIPNVE---------FPRKQFFTD 457
Query: 503 NDKTTYGAFVDINPHQPLSLRALIDHSVVESFGGKGRACITSRVY 547
+ SL ++D +++E + G +T+ +
Sbjct: 458 KLAAYLEPLDYDQDLRVFSLYGIVDKNIIELYFNDGTVAMTNTFF 502
>4EQV-A nrPDB
Length = 512
Score = 285 bits (728), Expect = 4e-77, Method: Composition-based stats.
Identities = 110/526 (20%), Positives = 183/526 (34%), Gaps = 64/526 (12%)
Query: 52 RTGFHFQPPKNWMNDPNGPMIY--KGIYHLFYQWNPKGAVWG-NIVWAHSTSTDLINWDP 108
R HF P K WMNDPNG +HL++Q+NP VWG + W H+TS DL NW+
Sbjct: 8 RPLVHFTPNKGWMNDPNGLWYDEKDAKWHLYFQYNPNDTVWGTPLFWGHATSDDLTNWED 67
Query: 109 HPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPK--------NL 160
P AI P + +G +SGS + N IDP+ + V +
Sbjct: 68 QPIAIAPKR--NDSGAFSGSMVVDYNNTSGFFNDTIDPRQRCVAIWTYNTPESEEQYISY 125
Query: 161 SDPYLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAIT 220
S + + NP++A N++ FRDP W +KW ++ +K + I
Sbjct: 126 SLDGGYTFTEYQKNPVLA------ANSTQFRDPKVFWYEPSQKW-IMTAAKSQDYKIEI- 177
Query: 221 YTSKDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRF-GSNGVETSSFGEPNEILKHVLKI 279
Y+S D W+ + +ECP V + F N
Sbjct: 178 YSSDDLKSWKLESAFANEGFLGYQYECPGLIEVPTEQDPSKSYWVMFISINPGAPA---- 233
Query: 280 SLDDTKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYG-KYYASKTFF--DSAKNRRI 336
+ Y +G+++ + D + D+G YYA +TFF D +
Sbjct: 234 ---GGSFNQYFVGSFNGTHFE-------AFDNQSRVVDFGKDYYALQTFFNTDPTYGSAL 283
Query: 337 LWGWTNESSSVEDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVREVERLRTKQVKNLRNK 396
W + W ++ RK L+ + P E+ L+ + + N+ N
Sbjct: 284 GIAWASNWEYSAFVPTNPWRSSMSLVRKFSLN---TEYQANPETELINLKAEPILNISN- 339
Query: 397 VLKSGSRLEVYGVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGLGPF 456
SR T + V +E ++ SV
Sbjct: 340 -AGPWSRF----ATNTTLTKANSYNVDLSNSTGTLEFELVYAVNTTQTISKSV---FADL 391
Query: 457 GLMVLASKNLEEYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINP 516
L ++ EEY + F + + + S+ ++N T V+ P
Sbjct: 392 SLWFKGLEDPEEYLRMGFEVSAS-------SFFLDRGNSKVKFVKENPYFTNRMSVNNQP 444
Query: 517 HQP------LSLRALIDHSVVESFGGKGRACITSRVYPKLAIGKSS 556
+ + L+D +++E + G T+ + S
Sbjct: 445 FKSENDLSYYKVYGLLDQNILELYFNDGDVVSTNTYFMTTGNALGS 490
>4FFH-A nrPDB
Length = 492
Score = 258 bits (658), Expect = 6e-69, Method: Composition-based stats.
Identities = 110/527 (20%), Positives = 182/527 (34%), Gaps = 99/527 (18%)
Query: 55 FHFQPPKNWMNDPNGPMIYKGIYHLFY----QWNPKGAVWGNIVWAHSTSTDLINWDPHP 110
+H PP W+ +P P+ G Y L+Y Q N G W H+++TD + + H
Sbjct: 4 YHMTPPSGWLCNPQRPVTTHGAYQLYYLHSDQNNGPGG------WDHASTTDGVAFTHHG 57
Query: 111 PAIFPSAPFDINGCWSGSATIL-------PNGKPVILYT----GIDPKNQQVQNIAEPKN 159
+ P P WSGSA + G V L T G+ +Q +
Sbjct: 58 -TVMPLRP--DFPVWSGSAVVDTANTAGFGAGAVVALATQPTDGVRKYQEQYLYWSTDGG 114
Query: 160 LSDPYLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAI 219
+ L + + A NA FRDP W +W +IG R A
Sbjct: 115 FTFTALPDPVIVNTDGRAATTPAEIENAEWFRDPKIHWDTARGEWVCVIG----RLRYAA 170
Query: 220 TYTSKDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKI 279
YTS + W + + G ECPD F +T + + +
Sbjct: 171 FYTSPNLRDWTLRRNFDYPNHALGGIECPDLFEITADDGTRHWVLAASMDAYGIGLPM-- 228
Query: 280 SLDDTKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRY-DYG-KYYASKTF--FDSAKNRR 335
+ Y+T GT+D + F D P++ D+G +YA+ T+ D+ + +R
Sbjct: 229 -----TYAYWT-GTWDGEQ--------FHADDLTPQWLDWGWDWYAAVTWPSIDAPETKR 274
Query: 336 ILWGWTNESSS----VEDDVEKGWSGIQTIPRKIWLDRSGKQ---LIQWPVREVERLRTK 388
+ W N V D G++G +I R++ L R L+ PV + T
Sbjct: 275 LAIAWMNNWKYAARDVPTDASDGYNGQNSIVRELRLARQPGGWYTLLSTPVAALTNYVTA 334
Query: 389 QVKNLRNKVLKSGSRLEVYGVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVS 448
V GS + + A + ++++ +
Sbjct: 335 TTTLPDRTV--DGSAVLPWNGRAYEIELDIAWDTATN----------------------- 369
Query: 449 VKSGLGPFGLMVLASKNLEEYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTY 508
G+ V S + +T++ KY + D+ S L +
Sbjct: 370 -------VGISVGRSPDGTRHTNI-----------GKYGADLYVDRGPSDLAGYSLAPYS 411
Query: 509 GAFVDINPH-QPLSLRALIDHSVVESFGGKGRACITSRVYPKLAIGK 554
A I+P + + LR L+D VE F G ++ +V+
Sbjct: 412 RAAAPIDPGARSVHLRILVDTQSVEVFVNAGHTVLSQQVHFAEGDTG 458
>5XH8-A nrPDB
Length = 605
Score = 115 bits (288), Expect = 4e-26, Method: Composition-based stats.
Identities = 105/602 (17%), Positives = 199/602 (33%), Gaps = 102/602 (16%)
Query: 46 SVNQPYRTGFHFQPPKNWMNDPNGPMIY-----KGIYHLFYQWNPKGAVWGNIVWAHSTS 100
S+ + +R H PP + DP ++ G++H+ + + G +T+
Sbjct: 21 SLFETWRPRAHVLPPNGQIGDP---CLHYTDPATGLFHVGFLHDGSGIS-------SATT 70
Query: 101 TDLINWDPHPP---AIFPSAPFDINGCWSGSATILP-NGKPVILYTGID----------P 146
DL + I P D + GS NG P +LYT +
Sbjct: 71 DDLATYQDLNQGNQVIVPGGINDPVAVFDGSVIPNGINGLPTLLYTSVSYLPIHWSIPYT 130
Query: 147 KNQQVQNIAEPKNLSDPYLREWKKSPLNPLMAPDAVNGINASSFRDPTTA--------WL 198
+ + Q++A +S + K P++ P N ++FRDP
Sbjct: 131 RGSETQSLA----VSSDGGSNFTKLDQGPVI-PGPPFAYNVTAFRDPYVFQNPTLDSLLH 185
Query: 199 GQDKKWRVIIGSKIHRRG----LAITYTSKDFLKWEKS----PEPLHYDDGSGMW----- 245
++ W +I +H +G L Y S DF WE EP + G+G W
Sbjct: 186 SKNNTWYTVISGGLHEKGPAQFLYRQYDS-DFQYWEYLGQWWHEPTNSTWGNGTWAGRWA 244
Query: 246 ---ECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKHDYYTIGTYDRVKD-KF 301
E + F + +G N E + L + GT R F
Sbjct: 245 FNFETGNVFSLDEYGYNPHGQIFTTIGTEGSDLPVVPQLTSIHDMLWVSGTVSRNGSVSF 304
Query: 302 VPDNGFKMDGTAPRYDYG-KYYASKTFF----------DSAKNRRILWGWTN----ESSS 346
P A D+G YA+ A +R I + W + E +
Sbjct: 305 NP-------NMAGFLDWGFSSYAAAGKVLPSTSLPSTKSGAPDRFISYVWLSGDLFEQAE 357
Query: 347 VEDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSRLEV 406
++ W+G +PR++ + ++ + + V + + L +
Sbjct: 358 GFPTNQQNWTGTLLLPRELRVLYI-PNVVDNALARESGASWQVVSSDGSAGTVELQTLGI 416
Query: 407 YGVTAAQADV--EVLFKVRDLEK-ADVIEPSWTDPQLICSKMNV------SVKSGLGPFG 457
+A + F + + P P ++ S + G
Sbjct: 417 SIARETKAALLSGTSFTESGRTLNSSGVVPFKRSPSEKFFVLSAQLSFPASARGSGLKSG 476
Query: 458 LMVLASKNLEEYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINPH 517
+L+S++ E T+VY++ ++ + ++ + + F +N
Sbjct: 477 FQILSSEH--ESTTVYYQFSNESIIVDRSNT-SAAARTTDGIDSSAEAGKLRLFDVLNGG 533
Query: 518 Q----PLSLRALIDHSVVESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNL 573
+ L L ++D+SV+E + GR +++ V A ++ F+ G V +
Sbjct: 534 EQAIETLDLTLVVDNSVLEVYAN-GRFALSTWVRSWYANST--NISFFHNGVGGVAFSKV 590
Query: 574 NA 575
Sbjct: 591 TV 592
>3LFI-A nrPDB
Length = 634
Score = 96.9 bits (239), Expect = 2e-20, Method: Composition-based stats.
Identities = 97/621 (15%), Positives = 190/621 (30%), Gaps = 119/621 (19%)
Query: 51 YRTGFHFQPPKNWMNDPNGPMIY--KGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWDP 108
+R H P + + DP G++H+ + + G G +T TD D
Sbjct: 26 WRPRAHILPAEGQIGDPCAHYTDPSTGLFHVGFLHDGDGIA-GATTANLATYTDTS--DN 82
Query: 109 HPPAIFPSAPFDINGCWSGSAT-ILPNGKPVILYTGID----------PKNQQVQNIAEP 157
I P D + G+ + N P +LYT + + + Q++A
Sbjct: 83 GSFLIQPGGKNDPVAVFDGAVIPVGVNNTPTLLYTSVSFLPIHWSIPYTRGSETQSLA-- 140
Query: 158 KNLSDPYLREWKKSPLNPLMAPDAVNGINASSFRDPTTA--------------------- 196
++ R + K P++A ++ ++FRDP
Sbjct: 141 --VARDGGRRFDKLDQGPVIADH-PFAVDVTAFRDPFVFRSARLDVLLSLDEEVARNETA 197
Query: 197 -------WLGQDKKWRVIIGSKIHRRGLA-ITY-----TSKDFLKWEK-----SPEPLHY 238
W ++ W V + +H G A Y + +F WE
Sbjct: 198 VQQAVDGWTEKNAPWYVAVSGGVHGVGPAQFLYRQNGGNASEFQYWEYLGEWWQEATNSS 257
Query: 239 DDGSGMW--------ECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKHD-YY 289
G W E + +T G + F + + + HD +
Sbjct: 258 WGDEGTWAGRWGFNFETGNVLFLTEEGHDPQTGEVFVTLGTEGSGLPIVPQVSSIHDMLW 317
Query: 290 TIGTYDRVKDKFVPDNGFKMDGTAPRYDYG-KYYASKTFF-----------DSAKNRRIL 337
G ++ F A D+G YA+ +R +
Sbjct: 318 AAGEVGVGSEQEGAKVEFS-PSMAGFLDWGFSAYAAAGKVLPASSAVSKTSGVEVDRYVS 376
Query: 338 WGWTNESSSVEDD----VEKGWSGIQTIPRKIWLDRSGKQL---------IQWPVREVER 384
+ W + D ++GW+G +PR++ + + + W V E +
Sbjct: 377 FVWLTGDQYEQADGFPTAQQGWTGSLLLPRELKVQTVENVVDNELVREEGVSWVVGESDN 436
Query: 385 LRTKQVKNLRNKVLKSGSRLEVYGVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSK 444
+T ++ L + + + + V + + + P P
Sbjct: 437 -QTATLRTLGITIARETKAALLANGS-------VTAEEDRTLQTAAVVPFAQSPSSKFFV 488
Query: 445 MN------VSVKSGLGPFGLMVLASKNLEEYTSVYFRIFKARQNSNKYVVLMCSDQSRSS 498
+ S +S G +LAS+ E T++Y++ ++ + +
Sbjct: 489 LTAQLEFPASARSSPLQSGFEILASE--LERTAIYYQFSNESLVVDRSQT-SAAAPTNPG 545
Query: 499 LKEDNDKTTYGAFVDINPH----QPLSLRALIDHSVVESFGGKGRACITSRVYPKLAIGK 554
L + F I + L L ++D++VVE + GR +++
Sbjct: 546 LDSFTESGKLRLFDVIENGQEQVETLDLTVVVDNAVVEVYAN-GRFALSTWARSWYDNST 604
Query: 555 SSHLFAFNYGYQSVDVLNLNA 575
F+ G V N++
Sbjct: 605 QIRF--FHNGEGEVQFRNVSV 623
>3R4Z-A nrPDB
Length = 374
Score = 39.5 bits (90), Expect = 0.005, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 47/130 (36%), Gaps = 17/130 (13%)
Query: 66 DPNGPMIYKGIYHLFY-----------QWNPKGAV--WGNIVWAHSTSTDLINWDPHPPA 112
DP+ + YH++Y NP+ V W H+TS D I W PA
Sbjct: 52 DPSAVLKVDDEYHVWYTKGEGETVGFGSDNPEDKVFPWDKTEVWHATSKDKITWKEIGPA 111
Query: 113 I--FPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLREWKK 170
I + +D ++ + NG ++Y + SD W K
Sbjct: 112 IQRGAAGAYDDRAVFT-PEVLRHNGTYYLVYQTVKAPYLNRSLEHIAIAYSDSPFGPWTK 170
Query: 171 SPLNPLMAPD 180
S P+++P+
Sbjct: 171 SDA-PILSPE 179
>5A7V-A nrPDB
Length = 388
Score = 37.6 bits (85), Expect = 0.014, Method: Composition-based stats.
Identities = 31/232 (13%), Positives = 59/232 (25%), Gaps = 32/232 (13%)
Query: 96 AHSTSTDLINWD-PHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNI 154
++TS+D I++ P +P W G P + Q ++I
Sbjct: 110 GYATSSDGIHFKREKTPVFYPDNDTQKKLEWPGGCE-DPRIAVTAEGLYVMTYTQWNRHI 168
Query: 155 AEPKNLSDPYLREWKKSPLNPLMAPD---------AVNGINASSFRDPTTAWLGQDKKWR 205
+ L++W K P A +G + + D K+
Sbjct: 169 PRLAIATSRNLKDWTKHG--PAFAKAYDGKFFNLGCKSGSILTEVVNGKQVIKKIDGKYF 226
Query: 206 VIIGSKIHRRGLAITYTSKDFLKWEKSPEPLHY----------DDGSGMWECPDFFPVTR 255
+ G + TS+D + W S + EC
Sbjct: 227 MYWGEEH-----VFAATSEDLVNWTPYVNTDGSLRKLFSPRDGHFDSQLTEC----GPPA 277
Query: 256 FGSNGVETSSFGEPNEILKHVLKISLDDTKHDYYTIGTYDRVKDKFVPDNGF 307
+ + N + + + + D + D F
Sbjct: 278 IYTPKGIVLLYNGKNSASRGDKRYTANVYAAGQALFDANDPTRFITRLDEPF 329
Score = 30.3 bits (66), Expect = 2.5, Method: Composition-based stats.
Identities = 32/164 (19%), Positives = 53/164 (32%), Gaps = 27/164 (16%)
Query: 73 YKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWDPHPPAIFPSAP--FDINGCWSGS-- 128
G Y ++ WG +TS DL+NW P+ +G +
Sbjct: 221 IDGKYFMY---------WGEEHVFAATSEDLVNWTPYVNTDGSLRKLFSPRDGHFDSQLT 271
Query: 129 -----ATILPNGKPVILYTGIDPKNQQVQN-----IAEPKNLSDPYLREWKKSPLNPLMA 178
A P G V+LY G + ++ + A + L D + L+
Sbjct: 272 ECGPPAIYTPKG-IVLLYNGKNSASRGDKRYTANVYAAGQALFDANDPTRFITRLDEPFF 330
Query: 179 PDAVNGINASSFRDPTTAWLGQ---DKKWRVIIGSKIHRRGLAI 219
+ + + D T G KW + G + G+AI
Sbjct: 331 RPMDSFEKSGQYVDGTVFIEGMVYYKDKWYLYYGCADSKVGMAI 374
>3P2N-A nrPDB
Length = 408
Score = 37.6 bits (85), Expect = 0.015, Method: Composition-based stats.
Identities = 55/321 (17%), Positives = 98/321 (30%), Gaps = 52/321 (16%)
Query: 66 DPNGPMIYKGIYHLFYQWN--PKGAVWGNIV------WA-----HSTSTDLINWDPHPPA 112
DP+ + G Y+++Y + P G+I W ++TS D W PA
Sbjct: 97 DPSAIIKENGKYYVWYSKSTGPTQGFGGDIEKDKVFPWDRCDIWYATSEDGWTWKEEGPA 156
Query: 113 I--FPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQN---IAEPKNLSDPYLR- 166
+ +D ++ + + T P N +V+N +A + P+ +
Sbjct: 157 VTRGEKGAYDDRSVFTVEIMKWEDKYYLCYQTVKSPYNVRVKNQVGLAWADSPDGPWTKS 216
Query: 167 -EWKKSPLNPLMAPDAVNGI---------NASSFRDPTT------AWLGQDKKWR---VI 207
E SP + + ++ DP +L + +
Sbjct: 217 EEPILSPADNGVWKGEEQDRFAVIKKGDFDSHKVHDPCIIPYKGKFYLYYKGEQMGEAIT 276
Query: 208 IGSKIHRRGLAITYTSKDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFG 267
G + R G+AI D K P + SG C G ++ G
Sbjct: 277 FGGRQIRHGVAI----ADNPKGPYVKSPYNPISNSGHEICV----WPYNGGIASLITTDG 328
Query: 268 EPNEILKHV-----LKISLDDTKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYY 322
++ +I + + IG +R D G Y+ G Y
Sbjct: 329 PEKNTIQWAPDGINFEIKSVIPGVNAHAIG-LNRTADVEKEPTEILRWGLTHIYNNGDYQ 387
Query: 323 ASKTFFDSAKNRRILWGWTNE 343
+ F K R + G +
Sbjct: 388 SIMRFSSERKTRHVAKGVKKQ 408
>2YFT-A nrPDB
Length = 571
Score = 36.8 bits (83), Expect = 0.027, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 26/74 (35%), Gaps = 14/74 (18%)
Query: 78 HLFYQWNPKGAVWGNIVWAHSTSTDLINWDPHPPAIFPSAPFDINGCWSGSATILPNGKP 137
H++ +N G D +W P + WSGSAT+ +G
Sbjct: 163 HIYLLYNKYG------------DNDFNHWKNAGPIFG--LGTPVIQQWSGSATLNKDGSI 208
Query: 138 VILYTGIDPKNQQV 151
+ YT +D +
Sbjct: 209 QLYYTKVDTSDNNT 222
>3LV4-A nrPDB
Length = 456
Score = 36.1 bits (81), Expect = 0.040, Method: Composition-based stats.
Identities = 28/148 (18%), Positives = 51/148 (34%), Gaps = 20/148 (13%)
Query: 84 NPKGAVWGNIVWAHSTSTDLINWD------PHPPAIFPS---------APFDINGCWSGS 128
N V+G+ A + STDL+NW + P+ + + W+
Sbjct: 22 NGTYYVFGS-HLASAKSTDLMNWTQISSSVHDGNPLIPNVYEELKETFEWAESDTLWAPD 80
Query: 129 ATILPNGKPVILYTGIDPKN-QQVQNIAEPKNLSDPYLRE--WKKSPLNPLMAPDAVNGI 185
T L +GK + Y + + +A ++ PY + + KS ++ +
Sbjct: 81 VTQLEDGKFYMYYNACRGDSPRSALGLAVADDIEGPYKNKGIFLKSGMDGISNDGTPYDA 140
Query: 186 NAS-SFRDPTTAWLGQDKKWRVIIGSKI 212
+ DP T + K W V
Sbjct: 141 TKHPNVVDPHTFFDQNGKLWMVYGSYSG 168
>4AK7-A nrPDB
Length = 404
Score = 34.5 bits (77), Expect = 0.12, Method: Composition-based stats.
Identities = 24/144 (16%), Positives = 47/144 (32%), Gaps = 20/144 (13%)
Query: 66 DPNGPMIYKGIYHLFYQ--WNPKGAVWGNIV------WA-----HSTSTDLINWDPHPPA 112
DP+ + Y+++Y + P G+I W ++TS D + W A
Sbjct: 92 DPSAMLKIGDTYYVWYSKSYGPTQGFAGDIEKDKVFPWDRCDIWYATSKDGLTWKEQGIA 151
Query: 113 I--FPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLREWKK 170
+ +D ++ + GK + Y + +D W K
Sbjct: 152 VKRGEKGAYDDRSVFT-PEVMEWKGKYYLCYQAVKSPYTVRVKNTIGMACADSPEGLWTK 210
Query: 171 SPLNPLMAPDAV---NGINASSFR 191
+ P++ P G + F+
Sbjct: 211 TD-KPVLEPSDTGEWEGDEDNRFK 233
>2UYT-A nrPDB
Length = 489
Score = 34.1 bits (76), Expect = 0.15, Method: Composition-based stats.
Identities = 23/148 (15%), Positives = 44/148 (29%), Gaps = 15/148 (10%)
Query: 194 TTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDFLKWEKSPEPLHYDDGSGMWECPDFFPV 253
W + ++ ++ S W P H + G W CP +
Sbjct: 171 KMNWEYTNATTTQLVNINSDDWDESLLAWSGANKAW--FGRPTHPGNVIGHWICPQGNEI 228
Query: 254 TRFGSNGVETSSFGEPNEILKHVLKISLDDTKHDYYTIGTYDRVKDK----FVPDNGFKM 309
+T+ V+ L+ ++ Y + GT+ + + F D
Sbjct: 229 PVVAVASHDTA---------SAVIASPLNGSRAAYLSSGTWSLMGFESQTPFTNDTALAA 279
Query: 310 DGTAPRYDYGKYYASKTFFDSAKNRRIL 337
+ T G+Y K +R+L
Sbjct: 280 NITNEGGAEGRYRVLKNIMGLWLLQRVL 307
>3QEF-A nrPDB
Length = 307
Score = 34.1 bits (76), Expect = 0.17, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 48/138 (34%), Gaps = 6/138 (4%)
Query: 71 MIYKGIYHLFYQWN--PKGAVWGNIV-WAHSTSTDLINWDPHPPAIFPSAPFDINGCWSG 127
+++KG +L+ + P + + W +S D+ NW+ H P + G
Sbjct: 18 LVHKGRVYLYAGRDEAPDNTTFFVMNEWLVYSSDDMANWEAHGPGLRAKDFTWAKGDAWA 77
Query: 128 SATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKSPLNPLMAPDAVNGINA 187
S I NGK Y + + + A + D + +K + L+ D
Sbjct: 78 SQVIERNGK-FYWYVTVRHDDTK-PGFAIGVAVGDSPIGPFKDALGKALITNDMTTDTPI 135
Query: 188 SSFR-DPTTAWLGQDKKW 204
DP+ + +
Sbjct: 136 DWDDIDPSVFIDDDGQAY 153
>3GHG-A nrPDB
Length = 562
Score = 33.8 bits (75), Expect = 0.23, Method: Composition-based stats.
Identities = 12/68 (17%), Positives = 20/68 (29%), Gaps = 6/68 (8%)
Query: 254 TRFGSNGVETSSFGEPNEILKHVLKISLDDTKHDYYTIGTYDRVKDKFVPDNGFKMDGTA 313
R GS G E + S+ + G + F PD+ +
Sbjct: 333 PRPGSTGTWNPGSSERGSAGHWTSESSVSGST------GQWHSESGSFRPDSPGSGNARP 386
Query: 314 PRYDYGKY 321
D+G +
Sbjct: 387 NNPDWGTF 394
>3ZXJ-A nrPDB
Length = 542
Score = 33.4 bits (74), Expect = 0.27, Method: Composition-based stats.
Identities = 81/524 (15%), Positives = 147/524 (28%), Gaps = 80/524 (15%)
Query: 52 RTGFHFQPPKNWMNDPNGPMIYKGIYHLF----YQWNPKGAVWGNIVWAHSTSTDLINWD 107
R F P W + P+ + G + + ++P V S DL++W
Sbjct: 3 RQASTFTNPVLWEDHPDLEVFRVGSVFYYSSSTFAYSPGAPV--------LKSYDLVHWT 54
Query: 108 PHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIA---EPKNLSDPY 164
P ++ P F GS LP+G P GI + + +
Sbjct: 55 PVTHSV-PRLNF-------GSNYDLPSGTPGAYVKGIWASTLRYRRSNDRFYWYGCVEGR 106
Query: 165 LREWKKSPLNPLM----APDAV-----NGINASSFRDPTTAWLGQDKKWRVIIGSKIHRR 215
W N L P + + + D D + I+
Sbjct: 107 TYLWTSPGGNALANNGEVPPSAWNWQHTATIDNCYYDAGLLIDDDDTMYIAYGNPTINVA 166
Query: 216 GLAITYTSKDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKH 275
L S D + + + ++ E + + G P +
Sbjct: 167 QL-----SPDGTRQVRVQQRVYAHPQGQTVEGARMYKI-----RGNYYILVTRPADA--E 214
Query: 276 VLKISLDDTKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRR 335
+ S + Y T + + GF G G ++ F D+ R
Sbjct: 215 YVLRSTTGSPFGPYEARTLVSRIQGPLANAGFAHQGGIVDAPDGTWH-YVAFMDAYPGGR 273
Query: 336 ILWG----WTNE-SSSVEDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVREVERLRTKQV 390
I WT + V D + W IP ++ E L + +
Sbjct: 274 IPVVAPLRWTADGWPEVVTDSQGRWGTSYPIP------------VRGAKNATEGLASTDL 321
Query: 391 KNLRNKVLKSGSRLEVYGVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVK 450
R G+R + D F + + +I + T + + N +
Sbjct: 322 DEFR------GTRFSEHWEWNHNPDTS-KFTLLGGNEGGLILRTATVTGDLFAARNTLTR 374
Query: 451 SGLGP-----FGLMVLASKNLEEYTSVYFRIFKA------RQNSNKYVVLMCSDQSRSSL 499
GP F L V ++ + +V FR A + N + V++ +
Sbjct: 375 RIAGPKASGIFRLDVRGMRDGDRAGAVLFRDRAAYIGVWKQGNEARIVMVDDLRLNEDGW 434
Query: 500 KEDNDKTTYGAFVDINPHQPLSLRALIDHSVVESFGGKGRACIT 543
+ + I+ + + ID + +FG T
Sbjct: 435 RTASTGRVAANGPVIDTNAQQDIWLRIDADITPAFGTNTERTTT 478
>4B2O-A nrPDB
Length = 286
Score = 33.4 bits (74), Expect = 0.30, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 33/96 (34%), Gaps = 6/96 (6%)
Query: 45 PSVNQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLI 104
P + Y+ HF N +G + + IYH Q GN W D I
Sbjct: 23 PKLKTKYKP--HFTIING-ENAAHGKGLTEKIYHSLIQSGADAITMGNHTWDKKEIFDFI 79
Query: 105 NWDPHPPAIFPSAPFDINGCWSGSATILPNGKPVIL 140
D P + P+ F G + NGK + +
Sbjct: 80 --DDVPNLVRPAN-FPEGTPGKGITYVKANGKELAV 112
>2WLX-A nrPDB
Length = 423
Score = 33.4 bits (74), Expect = 0.31, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 36/113 (31%), Gaps = 9/113 (7%)
Query: 80 FYQWNPKGAVWGNIVWAHSTSTDLINWDP-HPPAIFPSAPFDINGCWSGSATILPNGKPV 138
Y + W H+ S D + + H P + DI W A + + V
Sbjct: 305 GYSYIKPKGEIAGARWGHAGS-DSTHMEDFHNPDGTMRSADDITAMWK--AWNIKPEQQV 361
Query: 139 ILYTGIDPKNQQVQNIA-----EPKNLSDPYLREWKKSPLNPLMAPDAVNGIN 186
Y G + + A + ++ D EW P NP+ + +
Sbjct: 362 SFYCGTGWRASETFMYARAMGWKNVSVYDGGWYEWSSDPKNPVATGERGPDSS 414
>3C7F-A nrPDB
Length = 487
Score = 33.0 bits (73), Expect = 0.33, Method: Composition-based stats.
Identities = 37/241 (15%), Positives = 58/241 (24%), Gaps = 51/241 (21%)
Query: 71 MIYKGIYHLF-----YQWNPKGAVWGNIVWA-----HSTSTDLINWDPHP----PAIFPS 116
+ Y G +++ Y++N G + N +S D++NW H +
Sbjct: 28 LTYNGRVYIYMSSDDYEYNSNGTIKDNSFANLNRVFVISSADMVNWTDHGAIPVAGANGA 87
Query: 117 APFDINGCWSGS------ATILPNGK-PVILYTGIDPKNQQVQNIAEPKNLSDPYLREWK 169
W+G+ A NGK LY V +D + W
Sbjct: 88 NGGRGIAKWAGASWAPSIAVKKINGKDKFFLYFANSGGGIGVLT-------ADSPIGPWT 140
Query: 170 KSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDFLKW 229
PL+ P DP + G
Sbjct: 141 DPIGKPLVTPSTPGMSGVVWLFDPAVFVDDDGTGYLYAGGG------------------- 181
Query: 230 EKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKHDYY 289
P + G W P V + G + + L YY
Sbjct: 182 ----VPGVSNPTQGQWANPKTARVIKLGPDMTSVVGSASTIDAPFMFEDSGLHKYNGTYY 237
Query: 290 T 290
Sbjct: 238 Y 238
>3IB3-A nrPDB
Length = 560
Score = 33.0 bits (73), Expect = 0.41, Method: Composition-based stats.
Identities = 25/205 (12%), Positives = 56/205 (27%), Gaps = 21/205 (10%)
Query: 140 LYTGIDPKNQQVQNIAEPKNLSDPYLR---EWKKSPLNPLMAPDAVNGINASSFRDPTTA 196
Y I+ Q + YL W S P + +R+ A
Sbjct: 146 YYEVIEWAANQSWSNGNIGTNGVSYLAVTQWWVASLNPPHLKAMIPWEGLNDMYRE--VA 203
Query: 197 WLGQDKKWRVIIGSKIHRRGLAITYTSKDFLKWEKSPEPLHYDDGSGMWECP---DFFPV 253
+ I G +T F +W P D E P DF+
Sbjct: 204 FH-----------GGIPDTGFYRFWTQGIFARWT--DNPNIEDLIQAQQEHPLFDDFWKQ 250
Query: 254 TRFGSNGVETSSFGEPNEILKHVLKISLDDTKHDYYTIGTYDRVKDKFVPDNGFKMDGTA 313
+ + ++T + + + + + + V + ++ + +
Sbjct: 251 RQVPLSQIKTPLLTCASWSTQGLHNRGSFEGFKQAASEEKWLYVHGRKEWESYYARENLE 310
Query: 314 PRYDYGKYYASKTFFDSAKNRRILW 338
+ + +Y + D +++
Sbjct: 311 RQKSFFDFYLKEENNDWKDTPHVIY 335
>6EUG-A nrPDB
Length = 374
Score = 32.6 bits (72), Expect = 0.44, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 6/53 (11%)
Query: 69 GPMIYKGIYHLFYQWNPKG---AVWGNIVWAHSTSTDLINWDPHPPAIFPSAP 118
G + ++G Y+ F + P G + +STDL NW A+ S
Sbjct: 49 GILFHEGKYYWFGEHRPASGFVTEKGINCY---SSTDLYNWKSEGIALAVSEE 98
>6FRW-A nrPDB
Length = 411
Score = 32.6 bits (72), Expect = 0.45, Method: Composition-based stats.
Identities = 22/170 (12%), Positives = 46/170 (27%), Gaps = 10/170 (5%)
Query: 99 TSTDLINWDPHPPAIFPSAPFDINGCWSGSATILPN-GKPVILYTGIDP----KNQQVQN 153
S +W + W+G+ +L + G + YT + P + +
Sbjct: 102 YSRTGKDWI-FGGRVMAEGVSPTTREWAGTPILLNDEGDIDLYYTCVTPGATIAKVRGKI 160
Query: 154 IAEPKNLSDPYLREWKK-SPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKI 212
+ + +S + K + + +FRDP+ D K ++ +
Sbjct: 161 VTSDEGVSLEGFQHVKSLFSADGKIYQTEEQNA-YWNFRDPSPFIDKNDGKLYMLFEGNV 219
Query: 213 HRRGLAITYTSKDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVE 262
T +D P + C + E
Sbjct: 220 AGSRGTHEITQEDMGS--VPPGYENVGGARYQVGCIGLAVAKDLSGDEWE 267
>4D47-A nrPDB
Length = 415
Score = 32.6 bits (72), Expect = 0.50, Method: Composition-based stats.
Identities = 22/181 (12%), Positives = 50/181 (27%), Gaps = 10/181 (5%)
Query: 99 TSTDLINWDPHPPAIFPSAPFDINGCWSGSATILPN-GKPVILYTGIDP----KNQQVQN 153
S +W + W+G+ +L + G + YT + P + +
Sbjct: 106 YSRTGKDWI-FGGRVMAEGVSPTTREWAGTPILLNDRGDIDLYYTCVTPGATIAKVRGKI 164
Query: 154 IAEPKNLSDPYLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIH 213
+ +++S ++ +FRDP+ D K ++ +
Sbjct: 165 VTSDQSVSLEGFQQVTSLFSADGTIYQTEEQNAFWNFRDPSPFIDRNDGKLYMLFEGNVA 224
Query: 214 RRGLAITYTSKDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEIL 273
+ T + P + D G ++ +G E +
Sbjct: 225 GPRGSHEITQAEMGN----VPPGYEDVGGAKYQAGCVGLAVAKDLSGSEWQILPPLITAV 280
Query: 274 K 274
Sbjct: 281 G 281
>5TA9-A nrPDB
Length = 400
Score = 32.2 bits (71), Expect = 0.62, Method: Composition-based stats.
Identities = 38/241 (15%), Positives = 75/241 (31%), Gaps = 50/241 (20%)
Query: 66 DPNGPMIYKGIYHLFYQ--WNPKGAVWGNIV------WA-----HSTSTDLINWDPHPPA 112
DP+ + Y+++Y + G++ W ++TS D I W A
Sbjct: 88 DPSAMIKVGDKYYVWYSKSYGETQGFAGDVENEKVFPWDRCDIWYATSKDGITWKEEGVA 147
Query: 113 I--FPSAPFDINGCWSGSATILPNGKPVILY-TGIDPKNQQVQN---IAEPKNLSDPYLR 166
+ +D ++ + NGK + Y T P +V+ +A + P+ +
Sbjct: 148 VKRGEKGAYDDRSVFT-PEVMQWNGKYYLCYQTVKSPYTVRVKENVAMAWADSPDGPWEK 206
Query: 167 EWKKSPLNPLMAPDAV---NGINASSFR-------------DPTTAWLGQDKKWRVIIGS 210
P++ P G + F+ DP + +
Sbjct: 207 T-----DKPVLTPSDNGVWEGEEDNRFKVKAKGDFDSHKVHDPCIIPYNG----KFYLYY 257
Query: 211 KIHRRGLAITYTSKDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPN 270
K R G IT+ ++ D+ G + ++ P++ G G
Sbjct: 258 KGERMGEEITWGGREIKH-----GVAIADNPLGPYTKSEYNPISNSGHEICVWPYKGGIA 312
Query: 271 E 271
Sbjct: 313 S 313
>3R67-A nrPDB
Length = 356
Score = 32.2 bits (71), Expect = 0.64, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 51/147 (34%), Gaps = 17/147 (11%)
Query: 90 WGNIVWAHSTSTDLINWD-------PHPPAIFPSAP-FDINGCWSGSATILPNGKPVILY 141
WG +TSTDLINW+ I P FD + G I+ + ++LY
Sbjct: 204 WGEKFVNVATSTDLINWEPMLDEKGDFLKVITPREGKFDSDLTECGPPAIMTDKGILLLY 263
Query: 142 TGIDPKNQQVQNI----AEPKNLSDPYLREWKK--SPLNPLMAPDAVNGINASSFRDPTT 195
G + + + + + ++ K L+ + + + T
Sbjct: 264 NGKNKSGAEGDTLYTANSYCAGQALFDAKDPTKLIDRLDKPFYIPESDFEKSGQYPAGTV 323
Query: 196 AWLG---QDKKWRVIIGSKIHRRGLAI 219
G ++KW + G R +A+
Sbjct: 324 FIEGLVFHNQKWYLYYGCADSRVAVAV 350
Score = 31.4 bits (69), Expect = 1.0, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 47/130 (36%), Gaps = 10/130 (7%)
Query: 119 FDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKSP--LNPL 176
++ + ++ +ATI +GK V+LY D N V + L Y + P+
Sbjct: 46 WESSDTFNPAATI-YDGKVVVLYRAED--NSAVGIGSRTSRLGYAYSDDGLHFNRMTVPV 102
Query: 177 MAPDAVNGINASS---FRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDFLKWEKSP 233
P N DP A + +D + ++ ++ TS+D WEK
Sbjct: 103 FYPADDNQKELEWPGGCEDPRVA-VTEDGLYVMLYTQWNRKQARLAVATSRDLQIWEKY- 160
Query: 234 EPLHYDDGSG 243
P G
Sbjct: 161 GPAFAKAYGG 170
>5A8D-A nrPDB
Length = 326
Score = 31.8 bits (70), Expect = 0.75, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 30/119 (25%), Gaps = 6/119 (5%)
Query: 99 TSTDLINWDPHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPK 158
++ DL NW H S + +I+ LY G V P
Sbjct: 75 STDDLKNWTDHGEVFNAKRDSRWASV-SWAPSIVYRNNKFYLYYGNGGNGIGVAVSDSPT 133
Query: 159 NLSDPYLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGL 217
L S P + P DP + + G+ + +
Sbjct: 134 GPFKDPLPGPLVSWNTPGVQP-----AQNMWLFDPGVFVDDDGQAYMYFGGNGQNNIRV 187
>4NOV-A nrPDB
Length = 345
Score = 31.8 bits (70), Expect = 0.82, Method: Composition-based stats.
Identities = 41/209 (19%), Positives = 68/209 (32%), Gaps = 33/209 (15%)
Query: 66 DPNGPMIYKGIYHLFYQWNPKGAV---WGNIVWAHSTSTDLINWDPHPPAIFPSA--PFD 120
DP PM+Y +L+ + V + W ++ D++NW H D
Sbjct: 56 DP-APMVYGDTLYLYTTHDEDELVNDFYTMNDWRCFSTKDMVNWTDHGAIFSLDDIGWAD 114
Query: 121 INGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKSPLNPLMAPD 180
W+ A + NGK LY + +N + A +SD K PL+
Sbjct: 115 AR-AWAPQA-VERNGK-FYLYCPVHKRNGGM---AIAVGISDS-PTGPFKDLGYPLVDEG 167
Query: 181 AVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDFLKWEKSPEPLHYDD 240
N I DPT + + + + + + + + YD
Sbjct: 168 DWNDI------DPTVFIDDDGQAY--------------LYFGNPELRYVLLNENMITYDK 207
Query: 241 GSGMWECPDFFPVTRFGSNGVETSSFGEP 269
G+ + P GS+ TS P
Sbjct: 208 EVGIVKVPMTEEAFAKGSHDTGTSYGEGP 236
>4KCA-A nrPDB
Length = 692
Score = 31.8 bits (70), Expect = 0.89, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 41/131 (31%), Gaps = 13/131 (9%)
Query: 158 KNLSDPYLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGL 217
LS L+E+ + L + + + S DP+ W K + + + +
Sbjct: 93 GALSKGQLKEFLDANLAGSGSGPSTYELKRVSVHDPSIVWDPSSKTYYIFGSHRAAAK-- 150
Query: 218 AITYTSKDFLKWEKSPEP-----LHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEI 272
+ D + W P + + +E P V G V+ +F
Sbjct: 151 -----TTDLMSWTAFTAPWKTATSNNAANNVAFETPAVKKVK-KGGVDVDFPAFSATKWS 204
Query: 273 LKHVLKISLDD 283
K S+D
Sbjct: 205 AKGGSGYSVDG 215
>5HX2-G nrPDB
Length = 602
Score = 31.1 bits (68), Expect = 1.4, Method: Composition-based stats.
Identities = 26/181 (14%), Positives = 54/181 (29%), Gaps = 17/181 (9%)
Query: 288 YYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKT----------------FFDSA 331
YY +G D G ++GK YA T +
Sbjct: 34 YYELGDGDVPYSAGAWKTYNASSGQTLTAEWGKSYAINTSSGRVTINLPKGTVNDYNKVI 93
Query: 332 KNRRILWGWTNESSSVEDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVREVERLRTKQVK 391
+ R + W ++ G +P +I + S +L+ E ++ KQ+
Sbjct: 94 RARDVFATWNVNPVTLVAASGDTIKGS-AVPVEINVRFSDLELVYCAPGRWEYVKNKQID 152
Query: 392 NLRNKVLKSGSRLEVYGVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKS 451
+ + + + +R E Q D +F+ ++ + + +
Sbjct: 153 KITSSDISNVARKEFLVEVQGQTDFLDVFRGTSYNVNNIRVKHRGNELYYGDVFSENSDF 212
Query: 452 G 452
G
Sbjct: 213 G 213
>3OM6-A nrPDB
Length = 456
Score = 30.7 bits (67), Expect = 1.8, Method: Composition-based stats.
Identities = 19/113 (16%), Positives = 37/113 (32%), Gaps = 21/113 (18%)
Query: 125 WSGSATILPNGKPVILYTGI--DPKNQQVQNIAE-------PKNLSDPYLREWK-KSPLN 174
WSGS T+ +GK + YT +Q A+ L + ++K +
Sbjct: 144 WSGSGTLTKDGKVRLFYTDYSGKQYGKQTLTTAQVNMSQPNDNTLKVDGVEDYKSIFDGD 203
Query: 175 PLMAPD--------AVNGINASSFRDPTTAWLGQDK-KWRVIIGSKIHRRGLA 218
+ + + + RDP ++ + K+ V + G
Sbjct: 204 GKIYQTVQQFIDEGGADTGDNHTLRDP--HYIEDNGHKYLVFEANTGTEDGYQ 254
>3KST-A nrPDB
Length = 306
Score = 30.7 bits (67), Expect = 1.8, Method: Composition-based stats.
Identities = 7/25 (28%), Positives = 12/25 (48%)
Query: 221 YTSKDFLKWEKSPEPLHYDDGSGMW 245
++S D W++ + L D G W
Sbjct: 53 FSSDDLKNWKREGQALSATDSYGTW 77
Score = 30.3 bits (66), Expect = 2.2, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 25/69 (36%), Gaps = 10/69 (14%)
Query: 99 TSTDLINWDPHPPAIFPSAPFDINGCWSGSATILPNGKPVILY----------TGIDPKN 148
+S DL NW A+ + + G W+ + + K L+ T P+
Sbjct: 54 SSDDLKNWKREGQALSATDSYGTWGFWAPEVYYVESKKKFYLFYSAEEHICVATSTTPEG 113
Query: 149 QQVQNIAEP 157
Q + +P
Sbjct: 114 PFRQEVKQP 122
Score = 29.5 bits (64), Expect = 3.8, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 46/118 (38%), Gaps = 10/118 (8%)
Query: 91 GNIVWAHSTSTDLINW--DPHPPAIFPSAPFDI--NGCWSGSATILPNGKPVILYTGIDP 146
GN++W + DL++ + I +++ G + + NG ++Y+
Sbjct: 151 GNVIWVAQMTDDLMSIKTETLNQCIKAEVSWELLQGKVAEGPSLLKKNGVYYLIYSANHY 210
Query: 147 KNQQVQNIAEPKNLSDPYLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKW 204
+N+ SD + W K NPL+ DA G+ + P + +D W
Sbjct: 211 ENKGY---GVGYATSDTPMGPWVKYSKNPLLQGDAATGLVGTGHGAP---FQCKDGSW 262
>3BYN-A nrPDB
Length = 473
Score = 30.3 bits (66), Expect = 2.2, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 39/117 (33%), Gaps = 20/117 (17%)
Query: 120 DINGCWSGSATILPNGKPVILYTGIDPKN--------QQVQNIAEPKNLSDPYLREW--- 168
D WSGSAT +GK + YT K+ QV A +L+ + ++
Sbjct: 158 DQTQEWSGSATFTSDGKIRLFYTDFSGKHYGKQTLTTAQVNVSASDSSLNINGVEDYKSI 217
Query: 169 ------KKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDK-KWRVIIGSKIHRRGLA 218
+ + + + + RDP ++ K+ V + G
Sbjct: 218 FDGDGKTYQNVQQFIDEGNYSSGDNHTLRDP--HYVEDKGHKYLVFEANTGTEDGYQ 272
>6A8I-A nrPDB
Length = 321
Score = 30.3 bits (66), Expect = 2.6, Method: Composition-based stats.
Identities = 31/157 (19%), Positives = 56/157 (35%), Gaps = 26/157 (16%)
Query: 63 WMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWDPHPPAIFPSAP---- 118
W +DP +++F G TS D ++W+ +FPS P
Sbjct: 24 WAHDPV-IAKEGSRWYVF--HTGSGIQI-------KTSEDGVHWENMG-RVFPSLPDWCK 72
Query: 119 -----FDINGCWSGSATILPNGKPVILYT-GIDPKNQQVQNIAEPKNLSDPYLREWKKSP 172
D + W+ NG + Y+ KN V +A + L DP +++
Sbjct: 73 QYVPEKDEDHLWA-PDICFYNGIYYLYYSVSTFGKNTSVIGLATNRTL-DPRDPDYEWKD 130
Query: 173 LNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIG 209
+ P++ A + NA + P + + + W
Sbjct: 131 MGPVIHSTASDNYNAIN---PNVVFDQEGQPWLSFGS 164
>5JOY-A nrPDB
Length = 516
Score = 29.9 bits (65), Expect = 2.8, Method: Composition-based stats.
Identities = 26/192 (13%), Positives = 52/192 (27%), Gaps = 42/192 (21%)
Query: 81 YQWNPKGAVWGNIVWAHSTSTDLINWDPHPPAIFPSAPFDINGCWSGSATILP-----NG 135
+Q+ P ++ S DL++W+ + + D+ SGS P +G
Sbjct: 41 FQYFPGVPLF--------HSKDLVHWEQIGNCLTRPSQLDLTNANSGSGIFAPTIRYNDG 92
Query: 136 KPVILYTGIDPKNQQV-------QNIAEPKNLSDPYLREWKKSPLNPLMAPDAVNGINAS 188
++ T + K + +EP L + +G
Sbjct: 93 VFYMITTNVSGKGNFLVHTTDPRSEWSEPVWLEQGGIDPSLYFEDGKCFMVSNPDGYINL 152
Query: 189 SFRDPTT----------------------AWLGQDKKWRVIIGSKIHRRGLAITYTSKDF 226
DP T +D + ++I G +T +
Sbjct: 153 CEIDPMTGKQLSSSKRIWNGTGGRYAEGPHIYKKDGWYYLLISEGGTELGHKVTIARSRY 212
Query: 227 LKWEKSPEPLHY 238
+ P +
Sbjct: 213 IDGPYQGNPANP 224
>3MUN-A nrPDB
Length = 693
Score = 29.9 bits (65), Expect = 2.9, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 23/58 (39%), Gaps = 2/58 (3%)
Query: 38 QSTNTKSPSVNQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVW 95
Q+ T+ PYR + +W G + G YH F++ + N++W
Sbjct: 51 QNAVTQDYLAQIPYRAAIKEKLAASWNYAKEGAPFWWGRYHYFFKNDGLQNQ--NVLW 106
>4KC7-A nrPDB
Length = 474
Score = 29.9 bits (65), Expect = 3.1, Method: Composition-based stats.
Identities = 24/157 (15%), Positives = 46/157 (29%), Gaps = 30/157 (19%)
Query: 83 WNPKGAVWGNIVW---AH---STSTDLINWDPHPPA------IFPSAPFDING------- 123
+P GN+ + H + S DL++W+ + I P+ ++
Sbjct: 34 HDPSIIKVGNMYYVFGTHLQVAKSKDLMHWEQINTSAHDKNPIIPNINEELKETLSWART 93
Query: 124 ---CWSGSATILPNGKPVILY-TGIDPKNQQVQNIAEPKNLSDPYLREWKKSPLNPLMAP 179
W+ L +G+ + Y + IA ++ PY + +
Sbjct: 94 RNDIWAPQVIQLSDGRYYMYYCASTFGSPRSAIGIAVSDDIEGPYKHYAVIVKSGQVYSV 153
Query: 180 DAV-NGINASSFR------DPTTAWLGQDKKWRVIIG 209
D R DP + + W V
Sbjct: 154 DGPSEDGTPYDSRKHPNALDPGVFYDKEGNLWMVYGS 190
>4YHG-A nrPDB
Length = 389
Score = 29.1 bits (63), Expect = 5.4, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 27/74 (36%), Gaps = 1/74 (1%)
Query: 454 GPFGLMVLASKNLEEYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVD 513
G FG + ASK EE+ YFR + L D S D A
Sbjct: 294 GEFGAVRRASKADEEFRLYYFRYICKAMRDRRISALY-WDNGNSKAGNDGFGVIDHATGR 352
Query: 514 INPHQPLSLRALID 527
+ ++RA+ID
Sbjct: 353 FIGNGEQAVRAMID 366
>3WPZ-A nrPDB
Length = 542
Score = 29.1 bits (63), Expect = 5.6, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 30/100 (30%), Gaps = 16/100 (16%)
Query: 113 IFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKSP 172
IF F W+GSA + NG+ + +T + +P + K+
Sbjct: 151 IFEDQSFSHQTQWTGSARVSKNGEIKLFFTDVAFYRNSDGTNIKPYDPRIALSVGKVKAN 210
Query: 173 LNPLMAPD--------AVNGINAS--------SFRDPTTA 196
+ +G +FRDP T
Sbjct: 211 KKGVTLTGFNKVTDLLQADGTYYQTGAQNEFFNFRDPFTF 250
>4N4B-A nrPDB
Length = 360
Score = 28.4 bits (61), Expect = 10.0, Method: Composition-based stats.
Identities = 37/277 (13%), Positives = 63/277 (22%), Gaps = 38/277 (13%)
Query: 106 WDPHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYL 165
W P + P IL NG + + + P
Sbjct: 28 WTSTGPLVGPKNDGRGIAGIKDPTIILINGTHHVFASTAQSAGYNLVYFTFADWADAPN- 86
Query: 166 REWKKSPLNPLMAPDAVNGINASSFRD-PTTAWLGQDKKWRVIIGSKIHRRGLAITYTSK 224
+ PL + +R P W K W ++ ++ G A T+
Sbjct: 87 ATFYYLDQAPL----------GTGYRAAPQVFWFAPHKLWYLV-----YQNGNAAYSTNP 131
Query: 225 DFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDD- 283
D + P + + + L S D+
Sbjct: 132 DINNPKGWTAPKVFYPD-------GMPKIIEQNIGEGYWVDMWVICDSASCHLFSSDDNG 184
Query: 284 ------TKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRIL 337
T + + G V N GKY + +R
Sbjct: 185 QLYRSETSLEQFPNGMSQPVIAMQDNRNDLFEAACVYSLPDGKYLLLVEAIGTDGHR--- 241
Query: 338 WGWTNESSSVEDDVEKGWSGIQTIPRKIWLDRSGKQL 374
W + D + W G+ + W + Q
Sbjct: 242 --WFRSWT--ADSIRGPWQGLANTEQNPWARSNNVQF 274
Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
Posted date: Jan 3, 2023 9:05 PM
Number of letters in database: 10,336,785
Number of sequences in database: 36,641
Lambda K H
0.305 0.112 0.293
Lambda K H
0.267 0.0346 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,155,067
Number of Sequences: 36641
Number of extensions: 813064
Number of successful extensions: 2351
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 2175
Number of HSP's gapped (non-prelim): 92
length of query: 584
length of database: 10,336,785
effective HSP length: 102
effective length of query: 482
effective length of database: 6,599,403
effective search space: 3180912246
effective search space used: 3180912246
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.2 bits)
S2: 61 (28.4 bits)