BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q41931 (320 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5GJA-A nrPDB 632 0.0 1W9Y-A nrPDB 484 e-137 5O9W-A nrPDB 152 2e-37 1GP4-A nrPDB 143 8e-35 4XAE-A nrPDB 134 5e-32 6JYV-A nrPDB 113 1e-25 5C3R-A nrPDB 65 5e-11 3ON7-A nrPDB 58 7e-09 2VAU-A nrPDB 49 4e-06 5LSQ-A nrPDB 42 3e-04 5HDM-A nrPDB 33 0.12 6ED1-A nrPDB 31 0.68 1W2A-X nrPDB 29 2.9 3RST-A nrPDB 29 3.4 4KWB-A nrPDB 28 3.7 3VIB-A nrPDB 28 7.6 2WW2-A nrPDB 28 7.7 6FFL-A nrPDB 27 9.2 3H93-A nrPDB 27 9.6 3CTZ-A nrPDB 27 9.6 >5GJA-A nrPDB Length = 303 Score = 632 bits (1630), Expect = 0.0, Method: Compositional matrix adjust. Identities = 303/303 (100%), Positives = 303/303 (100%) Query: 1 MEKNMKFPVVDLSKLNGEERDQTMALINEACENWGFFEIVNHGLPHDLMDKIEKMTKDHY 60 MEKNMKFPVVDLSKLNGEERDQTMALINEACENWGFFEIVNHGLPHDLMDKIEKMTKDHY Sbjct: 1 MEKNMKFPVVDLSKLNGEERDQTMALINEACENWGFFEIVNHGLPHDLMDKIEKMTKDHY 60 Query: 61 KTCQEQKFNDMLKSKGLDNLETEVEDVDWESTFYVRHLPQSNLNDISDVSDEYRTAMKDF 120 KTCQEQKFNDMLKSKGLDNLETEVEDVDWESTFYVRHLPQSNLNDISDVSDEYRTAMKDF Sbjct: 61 KTCQEQKFNDMLKSKGLDNLETEVEDVDWESTFYVRHLPQSNLNDISDVSDEYRTAMKDF 120 Query: 121 GKRLENLAEDLLDLLCENLGLEKGYLKKVFHGTKGPTFGTKVSNYPPCPKPEMIKGLRAH 180 GKRLENLAEDLLDLLCENLGLEKGYLKKVFHGTKGPTFGTKVSNYPPCPKPEMIKGLRAH Sbjct: 121 GKRLENLAEDLLDLLCENLGLEKGYLKKVFHGTKGPTFGTKVSNYPPCPKPEMIKGLRAH 180 Query: 181 TDAGGIILLFQDDKVSGLQLLKDGDWIDVPPLNHSIVINLGDQLEVITNGKYKSVLHRVV 240 TDAGGIILLFQDDKVSGLQLLKDGDWIDVPPLNHSIVINLGDQLEVITNGKYKSVLHRVV Sbjct: 181 TDAGGIILLFQDDKVSGLQLLKDGDWIDVPPLNHSIVINLGDQLEVITNGKYKSVLHRVV 240 Query: 241 TQQEGNRMSVASFYNPGSDAEISPATSLVEKDSEYPSFVFDDYMKLYAGVKFQPKEPRFA 300 TQQEGNRMSVASFYNPGSDAEISPATSLVEKDSEYPSFVFDDYMKLYAGVKFQPKEPRFA Sbjct: 241 TQQEGNRMSVASFYNPGSDAEISPATSLVEKDSEYPSFVFDDYMKLYAGVKFQPKEPRFA 300 Query: 301 AMK 303 AMK Sbjct: 301 AMK 303 >1W9Y-A nrPDB Length = 319 Score = 484 bits (1245), Expect = e-137, Method: Compositional matrix adjust. Identities = 218/316 (68%), Positives = 265/316 (83%), Gaps = 5/316 (1%) Query: 7 FPVVDLSKLNGEERDQTMALINEACENWGFFEIVNHGLPHDLMDKIEKMTKDHYKTCQEQ 66 FP++ L K+NG ER TM +I +ACENWGFFE+VNHG+P ++MD +EKMTK HYK C EQ Sbjct: 4 FPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQ 63 Query: 67 KFNDMLKSKGLDNLETEVEDVDWESTFYVRHLPQSNLNDISDVSDEYRTAMKDFGKRLEN 126 +F +++ SK L+ ++ EV D+DWESTF+++HLP SN++++ D+ +EYR M+DF KRLE Sbjct: 64 RFKELVASKALEGVQAEVTDMDWESTFFLKHLPISNISEVPDLDEEYREVMRDFAKRLEK 123 Query: 127 LAEDLLDLLCENLGLEKGYLKKVFHGTKGPTFGTKVSNYPPCPKPEMIKGLRAHTDAGGI 186 LAE+LLDLLCENLGLEKGYLK F+G+KGP FGTKVSNYPPCPKP++IKGLRAHTDAGGI Sbjct: 124 LAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGI 183 Query: 187 ILLFQDDKVSGLQLLKDGDWIDVPPLNHSIVINLGDQLEVITNGKYKSVLHRVVTQQEGN 246 ILLFQDDKVSGLQLLKDG WIDVPP+ HSIV+NLGDQLEVITNGKYKSV+HRV+ Q++G Sbjct: 184 ILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGA 243 Query: 247 RMSVASFYNPGSDAEISPATSLVEKDSE-----YPSFVFDDYMKLYAGVKFQPKEPRFAA 301 RMS+ASFYNPGSDA I PA +LVEK++E YP FVFDDYMKLYAG+KFQ KEPRF A Sbjct: 244 RMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAKEPRFEA 303 Query: 302 MKNASAVTELNPTAAV 317 MK +++P A V Sbjct: 304 MKAMETDVKMDPIATV 319 >5O9W-A nrPDB Length = 367 Score = 152 bits (384), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 85/278 (30%), Positives = 153/278 (55%), Gaps = 12/278 (4%) Query: 7 FPVVDLSKLNGEE---RDQTMALINEACENWGFFEIVNHGLPHDLMDKIEKMTKDHY--- 60 PV+D+ L E + ++ AC+ WGFF++VNHG+ L+D ++ + + Sbjct: 58 IPVIDIENLLSPEPIIGKLELDRLHFACKEWGFFQVVNHGVDASLVDSVKSEIQGFFNLS 117 Query: 61 ---KTCQEQKFNDMLKSKGLDNLETEVEDVDWESTFYVRHLPQ--SNLNDISDVSDEYRT 115 KT EQ+ D ++ G +E+E + +DW F + LP + S + R Sbjct: 118 MDEKTKYEQEDGD-VEGFGQGFIESEDQTLDWADIFMMFTLPLHLRKPHLFSKLPVPLRE 176 Query: 116 AMKDFGKRLENLAEDLLDLLCENLGLEKGYLKKVFHGTKGPTFGTKVSNYPPCPKPEMIK 175 ++ + ++ L+ L + + + L ++ +K + T +++ YPPCP+P + Sbjct: 177 TIESYSSEMKKLSMVLFNKMEKALQVQAAEIKGMSEVFIDGTQAMRMNYYPPCPQPNLAI 236 Query: 176 GLRAHTDAGGIILLFQDDKVSGLQLLKDGDWIDVPPLNHSIVINLGDQLEVITNGKYKSV 235 GL +H+D GG+ +L Q ++V GLQ+ ++G WI V PL ++ V+N+GD LE++TNG Y SV Sbjct: 237 GLTSHSDFGGLTILLQINEVEGLQIKREGTWISVKPLPNAFVVNVGDILEIMTNGIYHSV 296 Query: 236 LHRVVTQQEGNRMSVASFYNPGSDAEISPATSLVEKDS 273 HR V R+S+A+F++P ++ I P +SL+ ++ Sbjct: 297 DHRAVVNSTNERLSIATFHDPSLESVIGPISSLITPET 334 >1GP4-A nrPDB Length = 356 Score = 143 bits (361), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 87/295 (29%), Positives = 148/295 (50%), Gaps = 16/295 (5%) Query: 6 KFPVVDLSKLNGEE---RDQTMALINEACENWGFFEIVNHGLPHDLMDKIEKMTKDHYKT 62 + P +DL + ++ R+ + + +A +WG ++NHG+P DLM++++K ++ + Sbjct: 46 QVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSL 105 Query: 63 CQEQK---FNDMLKSK----GLDNLETEVEDVDWESTFYVRHLPQS--NLNDISDVSDEY 113 E+K ND K G ++WE F+ P+ +L+ +Y Sbjct: 106 SVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDY 165 Query: 114 RTAMKDFGKRLENLAEDLLDLLCENLGLEKGYLKKVFHGTKGPTFGTKVSNYPPCPKPEM 173 A ++ K L LA + L LGLE L+K G + K++ YP CP+PE+ Sbjct: 166 IEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPEL 225 Query: 174 IKGLRAHTDAGGIILLFQDDKVSGLQLLKDGDWIDVPPLNHSIVINLGDQLEVITNGKYK 233 G+ AHTD + + + V GLQL +G W+ + SIV+++GD LE+++NGKYK Sbjct: 226 ALGVEAHTDVSALTFILHN-MVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYK 284 Query: 234 SVLHRVVTQQEGNRMSVASFYNPGSDAEI---SPATSLVEKDSEYPSFVFDDYMK 285 S+LHR + +E R+S A F P D + P VE +++P F +++ Sbjct: 285 SILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIE 339 >4XAE-A nrPDB Length = 373 Score = 134 bits (337), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 85/303 (28%), Positives = 149/303 (49%), Gaps = 31/303 (10%) Query: 2 EKNMKFPVVDLSKLNGEERDQTMALINEACENWGFFEIVNHGLPHDLMDKIEKMTKDHYK 61 E + PV+D+S + D+ + +A E WGFF+++NHG+P +++D ++ T + Sbjct: 69 ETDEAIPVIDMSN---PDEDRVAEAVCDAAEKWGFFQVINHGVPLEVLDDVKAATHKFFN 125 Query: 62 TCQEQKFNDMLKSKGLDNL-----------ETEVEDVDWESTFYVRHLPQSNLNDISDVS 110 E+K K L E +E D+ S F+V Sbjct: 126 LPVEEK-RKFTKENSLSTTVRFGTSFSPLAEQALEWKDYLSLFFVSEAEAEQF-----WP 179 Query: 111 DEYRTAMKDFGKRLENLAEDLLDLLCENLGLEK--GYLKKVFHGTKGPTFGTKVSNYPPC 168 D R ++ + + + LL+ L +NL +++ + +F G+ ++ YP C Sbjct: 180 DICRNETLEYINKSKKMVRRLLEYLGKNLNVKELDETKESLFMGS----IRVNLNYYPIC 235 Query: 169 PKPEMIKGLRAHTDAGGIILLFQDDKVSGLQL--LKDGDWIDVPPLNHSIVINLGDQLEV 226 P P++ G+ H+D + +L QD ++ GL + L G+W+ VPP+ S VIN+GD +++ Sbjct: 236 PNPDLTVGVGRHSDVSSLTILLQD-QIGGLHVRSLASGNWVHVPPVAGSFVINIGDAMQI 294 Query: 227 ITNGKYKSVLHRVVTQQEGNRMSVASFYNPGSDAEISPATSLVEKDSE--YPSFVFDDYM 284 ++NG YKSV HRV+ NR+SV F NP ++ I P ++ E Y ++ DY+ Sbjct: 295 MSNGLYKSVEHRVLANGYNNRISVPIFVNPKPESVIGPLPEVIANGEEPIYRDVLYSDYV 354 Query: 285 KLY 287 K + Sbjct: 355 KYF 357 >6JYV-A nrPDB Length = 339 Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 80/291 (27%), Positives = 129/291 (44%), Gaps = 30/291 (10%) Query: 6 KFPVVDLSKLNGEE---RDQTMALINEACENWGFFEIVNHGLPHDLMDKIEKMTKDHYKT 62 P++D++ L G + R I+ AC GFF +V HG+ L++++E++ + + Sbjct: 10 SLPIIDIAALAGSDPAARRSVAVRIDRACREQGFFYVVGHGVEAQLVERLERLARQFFAL 69 Query: 63 CQEQKFNDMLK-----SKGLDNLETEVED--VDWESTFYV------------RHLPQSNL 103 + K ++ +G L E+ DW+ Y+ P Sbjct: 70 DETSKLRWRMELGGRAWRGYFPLGGELTSNRPDWKEGLYLGSELDAEHPEVRAGTPLHGA 129 Query: 104 NDISDVSDEYRTAMKDFGKRLENLAEDLLDLLCENLGLEKGYLKKVFHGTKGPTFGTKVS 163 N +V R + ++ + L++ + LGLE Y + G P ++ Sbjct: 130 NLFPEVPG-LRETLLEYLDATTRVGHRLMEGIALGLGLEADYFAARYTGD--PLILFRLF 186 Query: 164 NYPPCPKPEMIK---GLRAHTDAGGIILLFQDDKVSGLQLLKDGDWIDVPPLNHSIVINL 220 NYP P PE + G+ HTD G + LL QD + GLQ+ W++ PP+ S V NL Sbjct: 187 NYPSQPVPEGLDVQWGVGEHTDYGLLTLLHQD-AIGGLQVRTPQGWLEAPPIPGSFVCNL 245 Query: 221 GDQLEVITNGKYKSVLHRVVTQQEG-NRMSVASFYNPGSDAEISPATSLVE 270 GD LE +T G Y+S HRV G +R+S F++P A + P L E Sbjct: 246 GDMLERMTGGLYRSTPHRVARNTSGRDRLSFPLFFDPNFHARVQPIEGLPE 296 >5C3R-A nrPDB Length = 343 Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 80/314 (25%), Positives = 139/314 (44%), Gaps = 45/314 (14%) Query: 2 EKNMKFPVVDLSK-LNGEE--RDQTMALINEACENWGFFEIVNHGLPHDLMDKIEKMTKD 58 E + P++D SK L G+E + +T I + GF + N + D + + + Sbjct: 10 EDGLVIPLIDFSKFLEGDETLKLETAKAILHGFQTAGFIYLKNIPIQPDFREHVFNTSAK 69 Query: 59 HYKTCQEQKF---------NDMLKSKGLDNLE-----TEVEDV-----DWESTFYV-RHL 98 +K +E+K N + G + + E+E + D + ++ + R Sbjct: 70 FFKLPKEKKLEVGWTTPEANRGYSAPGREKVTQLTDPAEIEKIRSAAPDIKESYEIGRED 129 Query: 99 PQSNLNDISDVSDE---YRTAMKDFGKRLENLAEDLLDLLCENLGLEKGYLKKVFHGTKG 155 + N D+ +++ M +F + + L +++ + +G++ Y Sbjct: 130 EPGHPNPWPAEQDDLVGFKSTMNNFFDQCKALHIEVMRAIAVGMGIDANYFDSFVDVGDN 189 Query: 156 PTFGTKVSNYPPCPKPEMIK----GLRA--HTDAGGIILLFQDDKVSGLQLLK-DGDWID 208 ++ +YP K E+ K +RA HTD G I LLFQD + GLQ+ +G +ID Sbjct: 190 IL---RLLHYPAV-KSEVFKINPGQVRAGEHTDYGSITLLFQDSR-GGLQVKSPNGQFID 244 Query: 209 VPPLNHSIVINLGDQLEVITNGKYKSVLHRVV--TQQEG---NRMSVASFYNPG--SDAE 261 P+ +++V+N GD L +N KS +HRVV +QE R S+A F NP S E Sbjct: 245 ATPIENTVVVNAGDLLARWSNDTIKSTVHRVVEPPKQEDVHPPRYSIAYFCNPNHKSYIE 304 Query: 262 ISPATSLVEKDSEY 275 P T E + +Y Sbjct: 305 AIPGTYAAESERKY 318 >3ON7-A nrPDB Length = 280 Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 37/110 (33%), Positives = 61/110 (55%), Gaps = 8/110 (7%) Query: 161 KVSNYPPCPKPEMIKGLRA--HTDAGGIILLFQDDKVSGLQL-LKDGDWIDVPPLNHSIV 217 ++ +YPP E + +RA H D I +L ++ GLQ+ KDG W+DVP +I+ Sbjct: 153 RILHYPPMTGDEEMGAIRAAAHEDINLITVLPTANE-PGLQVKAKDGSWLDVPSDFGNII 211 Query: 218 INLGDQLEVITNGKYKSVLHRVV----TQQEGNRMSVASFYNPGSDAEIS 263 IN+GD L+ ++G + S HRV+ T + +R+S+ F +P +S Sbjct: 212 INIGDMLQEASDGYFPSTSHRVINPEGTDKTKSRISLPLFLHPHPSVVLS 261 >2VAU-A nrPDB Length = 331 Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 69/294 (23%), Positives = 125/294 (42%), Gaps = 44/294 (14%) Query: 8 PVVDLSKLNGEERDQTMAL---INEACENWGFFEIVNHGLPHDLMDKIEKMTKD-HYKTC 63 P +D+S L G+++ M + I+ A + GFF VNHG+ + ++ + TK+ H Sbjct: 10 PKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGIN---VQRLSQKTKEFHMSIT 66 Query: 64 QEQKFNDMLKSKGLDNLET-------------EVEDVDWESTFYVRHLPQ----SNLNDI 106 E+K++ +++ ++ + VE + + + P+ + +++ Sbjct: 67 PEEKWDLAIRAYNKEHQDQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEV 126 Query: 107 SDVSDEYR-TAMKDFGKR----LENLAEDLLDLLCENLGLEKGYLKKVFHGTKGPTFGTK 161 + DE + +DF ++ + L+ LL LG E+ + + H T + Sbjct: 127 NVWPDETKHPGFQDFAEQYYWDVFGLSSALLKGYALALGKEENFFAR--HFKPDDTLASV 184 Query: 162 V-SNYPPC-PKPEMIKGLRA---------HTDAGGIILLFQDDKVSGLQLLKDGDWIDVP 210 V YP P PE A H D I +L+Q + V LQ+ + D+ Sbjct: 185 VLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQSN-VQNLQVETAAGYQDIE 243 Query: 211 PLNHSIVINLGDQLEVITNGKYKSVLHRVVTQQEGNRMSVASFYNPGSDAEISP 264 + +IN G + +TN YK+ +HR V R S+ F N G D+ I P Sbjct: 244 ADDTGYLINCGSYMAHLTNNYYKAPIHR-VKWVNAERQSLPFFVNLGYDSVIDP 296 >5LSQ-A nrPDB Length = 359 Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 44/178 (24%), Positives = 68/178 (38%), Gaps = 29/178 (16%) Query: 110 SDEYRTAMKDFGKRLENLAEDLLDLLCENLGLEKGYLKKVFHGTKGPTFGTKVSNYPPCP 169 ++ Y+ +MK F + L E LL L L + T+ +V +PP Sbjct: 132 NNTYQKSMKTFMEELGLAGERLLKLTALGFELPINTFTDL---TRDGWHHMRVLRFPP-Q 187 Query: 170 KPEMIKGLRAHTDAGGIILLFQDDKVSGLQLL-----------------------KDGDW 206 + +G+ AHTD G +++ QDD V GL + D W Sbjct: 188 TSTLSRGIGAHTDYGLLVIAAQDD-VGGLYIRPPVEGEKRNRNWLPGESSAGMFEHDEPW 246 Query: 207 IDVPPLNHSIVINLGDQLEVITNGKYKSVLHRVVTQQEGNRMSVASFYNPGSDAEISP 264 V P + GD L+ +T G+ S H+V R + A F+ P +A P Sbjct: 247 TFVTPTPGVWTVFPGDILQFMTGGQLLSTPHKVKLNTR-ERFACAYFHEPNFEASAYP 303 >5HDM-A nrPDB Length = 434 Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 4/80 (5%) Query: 163 SNYPPCPKPEMIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG--DWIDVPPLNHSIVINL 220 S + P P PE I GLR T G++L+F D+ ++G +L G ++ + P ++ + Sbjct: 219 SGFIP-PTPEFINGLRQLTKDNGVLLIF-DEVMTGFRLAYGGAQEYFGITPDLTTLGKII 276 Query: 221 GDQLEVITNGKYKSVLHRVV 240 G L V G + ++ V Sbjct: 277 GGGLPVGAYGGRRDIMEMVA 296 >6ED1-A nrPDB Length = 879 Score = 31.2 bits (69), Expect = 0.68, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 3/64 (4%) Query: 85 EDVDWESTFYVRHLPQSNLNDISD--VSDEYRTAMKDFGKRLENLAEDLLDLLCENLGLE 142 E V+ E+ F V + NL D +SD + MK RL + ++ LLD LC NLG E Sbjct: 650 EVVNGEAVFAVPFINGENLLDARSGALSDRLKIQMKLLSSRLTD-SDVLLDGLCINLGQE 708 Query: 143 KGYL 146 Y Sbjct: 709 HCYF 712 >1W2A-X nrPDB Length = 331 Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust. Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 8/92 (8%) Query: 180 HTDAGGIILLFQDDKVSG---LQLLKDGDWIDVPPLNHSIVINLGDQLEVITNGKYKSVL 236 H D + L+ Q +G LQ G + D+P ++++ G ++T G+ K+ Sbjct: 203 HYDLSMVTLIQQTPCANGFVSLQAEVGGAFTDLPYRPDAVLVFCGAIATLVTGGQVKAPR 262 Query: 237 HRVVTQQE-----GNRMSVASFYNPGSDAEIS 263 H V + +R S F P +D S Sbjct: 263 HHVAAPRRDQIAGSSRTSSVFFLRPNADFTFS 294 >3RST-A nrPDB Length = 240 Score = 28.9 bits (63), Expect = 3.4, Method: Compositional matrix adjust. Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 7/98 (7%) Query: 37 FEIVNHGLPHDLMDKIEKMTKDHYKTCQE------QKFNDMLKSKGLDNLETEVEDVDWE 90 FE + G D+M +MTK+ Q + F D++ SKG + EV+ + Sbjct: 135 FETIKSGAHADIMSPSREMTKEEKNIMQSMVDNSYEGFVDVI-SKGRGMPKAEVKKIADG 193 Query: 91 STFYVRHLPQSNLNDISDVSDEYRTAMKDFGKRLENLA 128 + R + NL D D+ TAMK K L+N + Sbjct: 194 RVYDGRQAKKLNLVDELGFYDDTITAMKKDHKDLKNAS 231 >4KWB-A nrPDB Length = 273 Score = 28.5 bits (62), Expect = 3.7, Method: Compositional matrix adjust. Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 7/98 (7%) Query: 37 FEIVNHGLPHDLMDKIEKMTKDHYKTCQE------QKFNDMLKSKGLDNLETEVEDVDWE 90 FE + G D+M +MTK+ Q + F D++ SKG + EV+ + Sbjct: 140 FETIKSGAHADIMSPSREMTKEEKNIMQSMVDNSYEGFVDVI-SKGRGMPKAEVKKIADG 198 Query: 91 STFYVRHLPQSNLNDISDVSDEYRTAMKDFGKRLENLA 128 + R + NL D D+ TAMK K L+N + Sbjct: 199 RVYDGRQAKKLNLVDELGFYDDTITAMKKDHKDLKNAS 236 >3VIB-A nrPDB Length = 210 Score = 27.7 bits (60), Expect = 7.6, Method: Compositional matrix adjust. Identities = 13/48 (27%), Positives = 28/48 (58%) Query: 92 TFYVRHLPQSNLNDISDVSDEYRTAMKDFGKRLENLAEDLLDLLCENL 139 TFY + + +++LN+I+ + R A+ K E+L + L +C+++ Sbjct: 22 TFYRKGIARTSLNEIAQAAGVTRDALYWHFKNKEDLFDALFQRICDDI 69 >2WW2-A nrPDB Length = 737 Score = 27.7 bits (60), Expect = 7.7, Method: Compositional matrix adjust. Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 2/65 (3%) Query: 211 PLNHSIVINLGDQLEVITNGKYKSVLHRVVTQQEGNRMSVASFYNPGSDAEISPATSLVE 270 P N+S+ N G L+ + + + V ++ ++ V YN GS I P LV+ Sbjct: 109 PYNYSVTFNNG--LQTSLSATSRGAVFEVSFPEKEDQYVVVDAYNGGSSITIEPEKRLVK 166 Query: 271 KDSEY 275 + Y Sbjct: 167 GATRY 171 >6FFL-A nrPDB Length = 388 Score = 27.3 bits (59), Expect = 9.2, Method: Compositional matrix adjust. Identities = 14/33 (42%), Positives = 19/33 (57%) Query: 198 LQLLKDGDWIDVPPLNHSIVINLGDQLEVITNG 230 L LL + +I PP N +I LG ++ V TNG Sbjct: 116 LMLLYNKKFITTPPKNSQELIELGKKMTVDTNG 148 >3H93-A nrPDB Length = 192 Score = 27.3 bits (59), Expect = 9.6, Method: Compositional matrix adjust. Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Query: 36 FFEIVNHGLPHDLMDKI-EKMTKDHYKTCQEQKFNDMLKSKGLDN 79 F + + G+ HD+ + + E + K+H K ++ D L KG+D Sbjct: 78 FLTLESMGVEHDVHNAVFEAIHKEHKKLATPEEMADFLAGKGVDK 122 >3CTZ-A nrPDB Length = 623 Score = 27.3 bits (59), Expect = 9.6, Method: Compositional matrix adjust. Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%) Query: 198 LQLLKDGDWIDVPPLNHSIVINLGDQLEV-ITNGKYKSVL 236 + L DGD ID P + ++++LG + E I YKS+L Sbjct: 233 IMLFIDGDRIDAPSVKEHLLLDLGLEAEYRIQVHPYKSIL 272 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5GJA-A nrPDB 438 e-123 1W9Y-A nrPDB 436 e-123 1GP4-A nrPDB 324 5e-89 5O9W-A nrPDB 321 2e-88 4XAE-A nrPDB 306 9e-84 6JYV-A nrPDB 300 7e-82 2VAU-A nrPDB 251 3e-67 5C3R-A nrPDB 248 3e-66 5LSQ-A nrPDB 184 4e-47 3ON7-A nrPDB 158 4e-39 Sequences not found previously or not previously below threshold: 1W2A-X nrPDB 74 6e-14 3J0A-A nrPDB 31 0.91 4KVK-A nrPDB 30 1.9 >5GJA-A nrPDB Length = 303 Score = 438 bits (1127), Expect = e-123, Method: Composition-based stats. Identities = 303/303 (100%), Positives = 303/303 (100%) Query: 1 MEKNMKFPVVDLSKLNGEERDQTMALINEACENWGFFEIVNHGLPHDLMDKIEKMTKDHY 60 MEKNMKFPVVDLSKLNGEERDQTMALINEACENWGFFEIVNHGLPHDLMDKIEKMTKDHY Sbjct: 1 MEKNMKFPVVDLSKLNGEERDQTMALINEACENWGFFEIVNHGLPHDLMDKIEKMTKDHY 60 Query: 61 KTCQEQKFNDMLKSKGLDNLETEVEDVDWESTFYVRHLPQSNLNDISDVSDEYRTAMKDF 120 KTCQEQKFNDMLKSKGLDNLETEVEDVDWESTFYVRHLPQSNLNDISDVSDEYRTAMKDF Sbjct: 61 KTCQEQKFNDMLKSKGLDNLETEVEDVDWESTFYVRHLPQSNLNDISDVSDEYRTAMKDF 120 Query: 121 GKRLENLAEDLLDLLCENLGLEKGYLKKVFHGTKGPTFGTKVSNYPPCPKPEMIKGLRAH 180 GKRLENLAEDLLDLLCENLGLEKGYLKKVFHGTKGPTFGTKVSNYPPCPKPEMIKGLRAH Sbjct: 121 GKRLENLAEDLLDLLCENLGLEKGYLKKVFHGTKGPTFGTKVSNYPPCPKPEMIKGLRAH 180 Query: 181 TDAGGIILLFQDDKVSGLQLLKDGDWIDVPPLNHSIVINLGDQLEVITNGKYKSVLHRVV 240 TDAGGIILLFQDDKVSGLQLLKDGDWIDVPPLNHSIVINLGDQLEVITNGKYKSVLHRVV Sbjct: 181 TDAGGIILLFQDDKVSGLQLLKDGDWIDVPPLNHSIVINLGDQLEVITNGKYKSVLHRVV 240 Query: 241 TQQEGNRMSVASFYNPGSDAEISPATSLVEKDSEYPSFVFDDYMKLYAGVKFQPKEPRFA 300 TQQEGNRMSVASFYNPGSDAEISPATSLVEKDSEYPSFVFDDYMKLYAGVKFQPKEPRFA Sbjct: 241 TQQEGNRMSVASFYNPGSDAEISPATSLVEKDSEYPSFVFDDYMKLYAGVKFQPKEPRFA 300 Query: 301 AMK 303 AMK Sbjct: 301 AMK 303 >1W9Y-A nrPDB Length = 319 Score = 436 bits (1122), Expect = e-123, Method: Composition-based stats. Identities = 218/318 (68%), Positives = 265/318 (83%), Gaps = 5/318 (1%) Query: 5 MKFPVVDLSKLNGEERDQTMALINEACENWGFFEIVNHGLPHDLMDKIEKMTKDHYKTCQ 64 FP++ L K+NG ER TM +I +ACENWGFFE+VNHG+P ++MD +EKMTK HYK C Sbjct: 2 ENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCM 61 Query: 65 EQKFNDMLKSKGLDNLETEVEDVDWESTFYVRHLPQSNLNDISDVSDEYRTAMKDFGKRL 124 EQ+F +++ SK L+ ++ EV D+DWESTF+++HLP SN++++ D+ +EYR M+DF KRL Sbjct: 62 EQRFKELVASKALEGVQAEVTDMDWESTFFLKHLPISNISEVPDLDEEYREVMRDFAKRL 121 Query: 125 ENLAEDLLDLLCENLGLEKGYLKKVFHGTKGPTFGTKVSNYPPCPKPEMIKGLRAHTDAG 184 E LAE+LLDLLCENLGLEKGYLK F+G+KGP FGTKVSNYPPCPKP++IKGLRAHTDAG Sbjct: 122 EKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAG 181 Query: 185 GIILLFQDDKVSGLQLLKDGDWIDVPPLNHSIVINLGDQLEVITNGKYKSVLHRVVTQQE 244 GIILLFQDDKVSGLQLLKDG WIDVPP+ HSIV+NLGDQLEVITNGKYKSV+HRV+ Q++ Sbjct: 182 GIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKD 241 Query: 245 GNRMSVASFYNPGSDAEISPATSLVEKDSE-----YPSFVFDDYMKLYAGVKFQPKEPRF 299 G RMS+ASFYNPGSDA I PA +LVEK++E YP FVFDDYMKLYAG+KFQ KEPRF Sbjct: 242 GARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAKEPRF 301 Query: 300 AAMKNASAVTELNPTAAV 317 AMK +++P A V Sbjct: 302 EAMKAMETDVKMDPIATV 319 >1GP4-A nrPDB Length = 356 Score = 324 bits (829), Expect = 5e-89, Method: Composition-based stats. Identities = 85/299 (28%), Positives = 148/299 (49%), Gaps = 16/299 (5%) Query: 2 EKNMKFPVVDLSKLNGEE---RDQTMALINEACENWGFFEIVNHGLPHDLMDKIEKMTKD 58 E + P +DL + ++ R+ + + +A +WG ++NHG+P DLM++++K ++ Sbjct: 42 EDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEE 101 Query: 59 HYKTCQEQKFNDM-------LKSKGLDNLETEVEDVDWESTFYVRHLPQS--NLNDISDV 109 + E+K ++ G ++WE F+ P+ +L+ Sbjct: 102 FFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKT 161 Query: 110 SDEYRTAMKDFGKRLENLAEDLLDLLCENLGLEKGYLKKVFHGTKGPTFGTKVSNYPPCP 169 +Y A ++ K L LA + L LGLE L+K G + K++ YP CP Sbjct: 162 PSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCP 221 Query: 170 KPEMIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGDWIDVPPLNHSIVINLGDQLEVITN 229 +PE+ G+ AHTD + + + V GLQL +G W+ + SIV+++GD LE+++N Sbjct: 222 QPELALGVEAHTDVSALTFILH-NMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSN 280 Query: 230 GKYKSVLHRVVTQQEGNRMSVASFYNPGSDAEI---SPATSLVEKDSEYPSFVFDDYMK 285 GKYKS+LHR + +E R+S A F P D + P VE +++P F +++ Sbjct: 281 GKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIE 339 >5O9W-A nrPDB Length = 367 Score = 321 bits (823), Expect = 2e-88, Method: Composition-based stats. Identities = 81/283 (28%), Positives = 152/283 (53%), Gaps = 10/283 (3%) Query: 1 MEKNMKFPVVDLSKLNGEE---RDQTMALINEACENWGFFEIVNHGLPHDLMDKIEKMTK 57 + + PV+D+ L E + ++ AC+ WGFF++VNHG+ L+D ++ + Sbjct: 52 INDHETIPVIDIENLLSPEPIIGKLELDRLHFACKEWGFFQVVNHGVDASLVDSVKSEIQ 111 Query: 58 DHYKTCQEQKFNDM-----LKSKGLDNLETEVEDVDWESTFYVRHLPQS--NLNDISDVS 110 + ++K ++ G +E+E + +DW F + LP + S + Sbjct: 112 GFFNLSMDEKTKYEQEDGDVEGFGQGFIESEDQTLDWADIFMMFTLPLHLRKPHLFSKLP 171 Query: 111 DEYRTAMKDFGKRLENLAEDLLDLLCENLGLEKGYLKKVFHGTKGPTFGTKVSNYPPCPK 170 R ++ + ++ L+ L + + + L ++ +K + T +++ YPPCP+ Sbjct: 172 VPLRETIESYSSEMKKLSMVLFNKMEKALQVQAAEIKGMSEVFIDGTQAMRMNYYPPCPQ 231 Query: 171 PEMIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGDWIDVPPLNHSIVINLGDQLEVITNG 230 P + GL +H+D GG+ +L Q ++V GLQ+ ++G WI V PL ++ V+N+GD LE++TNG Sbjct: 232 PNLAIGLTSHSDFGGLTILLQINEVEGLQIKREGTWISVKPLPNAFVVNVGDILEIMTNG 291 Query: 231 KYKSVLHRVVTQQEGNRMSVASFYNPGSDAEISPATSLVEKDS 273 Y SV HR V R+S+A+F++P ++ I P +SL+ ++ Sbjct: 292 IYHSVDHRAVVNSTNERLSIATFHDPSLESVIGPISSLITPET 334 >4XAE-A nrPDB Length = 373 Score = 306 bits (783), Expect = 9e-84, Method: Composition-based stats. Identities = 84/303 (27%), Positives = 148/303 (48%), Gaps = 31/303 (10%) Query: 2 EKNMKFPVVDLSKLNGEERDQTMALINEACENWGFFEIVNHGLPHDLMDKIEKMTKDHYK 61 E + PV+D+S + D+ + +A E WGFF+++NHG+P +++D ++ T + Sbjct: 69 ETDEAIPVIDMSN---PDEDRVAEAVCDAAEKWGFFQVINHGVPLEVLDDVKAATHKFFN 125 Query: 62 TCQEQKFNDMLKSKGLDNL-----------ETEVEDVDWESTFYVRHLPQSNLNDISDVS 110 E+K K L E +E D+ S F+V Sbjct: 126 LPVEEK-RKFTKENSLSTTVRFGTSFSPLAEQALEWKDYLSLFFVSEAEAEQF-----WP 179 Query: 111 DEYRTAMKDFGKRLENLAEDLLDLLCENLGLEK--GYLKKVFHGTKGPTFGTKVSNYPPC 168 D R ++ + + + LL+ L +NL +++ + +F G+ ++ YP C Sbjct: 180 DICRNETLEYINKSKKMVRRLLEYLGKNLNVKELDETKESLFMGS----IRVNLNYYPIC 235 Query: 169 PKPEMIKGLRAHTDAGGIILLFQDDKVSGLQLLK--DGDWIDVPPLNHSIVINLGDQLEV 226 P P++ G+ H+D + +L QD ++ GL + G+W+ VPP+ S VIN+GD +++ Sbjct: 236 PNPDLTVGVGRHSDVSSLTILLQD-QIGGLHVRSLASGNWVHVPPVAGSFVINIGDAMQI 294 Query: 227 ITNGKYKSVLHRVVTQQEGNRMSVASFYNPGSDAEISPATSLVEKDSE--YPSFVFDDYM 284 ++NG YKSV HRV+ NR+SV F NP ++ I P ++ E Y ++ DY+ Sbjct: 295 MSNGLYKSVEHRVLANGYNNRISVPIFVNPKPESVIGPLPEVIANGEEPIYRDVLYSDYV 354 Query: 285 KLY 287 K + Sbjct: 355 KYF 357 >6JYV-A nrPDB Length = 339 Score = 300 bits (767), Expect = 7e-82, Method: Composition-based stats. Identities = 80/295 (27%), Positives = 130/295 (44%), Gaps = 30/295 (10%) Query: 6 KFPVVDLSKLNGEE---RDQTMALINEACENWGFFEIVNHGLPHDLMDKIEKMTKDHYKT 62 P++D++ L G + R I+ AC GFF +V HG+ L++++E++ + + Sbjct: 10 SLPIIDIAALAGSDPAARRSVAVRIDRACREQGFFYVVGHGVEAQLVERLERLARQFFAL 69 Query: 63 CQEQKFNDMLK-----SKGLDNLETEVED--VDWESTFYV------------RHLPQSNL 103 + K ++ +G L E+ DW+ Y+ P Sbjct: 70 DETSKLRWRMELGGRAWRGYFPLGGELTSNRPDWKEGLYLGSELDAEHPEVRAGTPLHGA 129 Query: 104 NDISDVSDEYRTAMKDFGKRLENLAEDLLDLLCENLGLEKGYLKKVFHGTKGPTFGTKVS 163 N +V R + ++ + L++ + LGLE Y + G P ++ Sbjct: 130 NLFPEVPG-LRETLLEYLDATTRVGHRLMEGIALGLGLEADYFAARYTG--DPLILFRLF 186 Query: 164 NYPPCPKPEMIK---GLRAHTDAGGIILLFQDDKVSGLQLLKDGDWIDVPPLNHSIVINL 220 NYP P PE + G+ HTD G + LL QD + GLQ+ W++ PP+ S V NL Sbjct: 187 NYPSQPVPEGLDVQWGVGEHTDYGLLTLLHQD-AIGGLQVRTPQGWLEAPPIPGSFVCNL 245 Query: 221 GDQLEVITNGKYKSVLHRVVTQQEG-NRMSVASFYNPGSDAEISPATSLVEKDSE 274 GD LE +T G Y+S HRV G +R+S F++P A + P L E + Sbjct: 246 GDMLERMTGGLYRSTPHRVARNTSGRDRLSFPLFFDPNFHARVQPIEGLPEVPEQ 300 >2VAU-A nrPDB Length = 331 Score = 251 bits (641), Expect = 3e-67, Method: Composition-based stats. Identities = 71/317 (22%), Positives = 131/317 (41%), Gaps = 45/317 (14%) Query: 7 FPVVDLSKLNGEERDQTMAL---INEACENWGFFEIVNHGLPHDLMDKIEKMTKDH-YKT 62 P +D+S L G+++ M + I+ A + GFF VNHG+ + ++ + TK+ Sbjct: 9 VPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGIN---VQRLSQKTKEFHMSI 65 Query: 63 CQEQKFNDMLKSKGLDNLET-------------EVEDVDWESTFYVRHLPQ----SNLND 105 E+K++ +++ ++ + VE + + + P+ + ++ Sbjct: 66 TPEEKWDLAIRAYNKEHQDQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHE 125 Query: 106 ISDVSDEYR-TAMKDFGKR----LENLAEDLLDLLCENLGLEKGYLKKVFHGTKGPTFGT 160 ++ DE + +DF ++ + L+ LL LG E+ + + H T + Sbjct: 126 VNVWPDETKHPGFQDFAEQYYWDVFGLSSALLKGYALALGKEENFFAR--HFKPDDTLAS 183 Query: 161 KVS-NYPPC-PKPEMIKGLRA---------HTDAGGIILLFQDDKVSGLQLLKDGDWIDV 209 V YP P PE A H D I +L+Q + V LQ+ + D+ Sbjct: 184 VVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQSN-VQNLQVETAAGYQDI 242 Query: 210 PPLNHSIVINLGDQLEVITNGKYKSVLHRVVTQQEGNRMSVASFYNPGSDAEISPA-TSL 268 + +IN G + +TN YK+ +HRV R S+ F N G D+ I P Sbjct: 243 EADDTGYLINCGSYMAHLTNNYYKAPIHRV-KWVNAERQSLPFFVNLGYDSVIDPFDPRE 301 Query: 269 VEKDSEYPSFVFDDYMK 285 S+ + DY++ Sbjct: 302 PNGKSDREPLSYGDYLQ 318 >5C3R-A nrPDB Length = 343 Score = 248 bits (632), Expect = 3e-66, Method: Composition-based stats. Identities = 77/323 (23%), Positives = 134/323 (41%), Gaps = 45/323 (13%) Query: 2 EKNMKFPVVDLSK-LNGEE--RDQTMALINEACENWGFFEIVNHGLPHDLMDKIEKMTKD 58 E + P++D SK L G+E + +T I + GF + N + D + + + Sbjct: 10 EDGLVIPLIDFSKFLEGDETLKLETAKAILHGFQTAGFIYLKNIPIQPDFREHVFNTSAK 69 Query: 59 HYKTCQEQKF---------NDMLKSKGLDNLET-----EVED-----VDWESTFYV-RHL 98 +K +E+K N + G + + E+E D + ++ + R Sbjct: 70 FFKLPKEKKLEVGWTTPEANRGYSAPGREKVTQLTDPAEIEKIRSAAPDIKESYEIGRED 129 Query: 99 PQSNLNDISDVSDE---YRTAMKDFGKRLENLAEDLLDLLCENLGLEKGYLKKVFHGTKG 155 + N D+ +++ M +F + + L +++ + +G++ Y Sbjct: 130 EPGHPNPWPAEQDDLVGFKSTMNNFFDQCKALHIEVMRAIAVGMGIDANYFDSFVDVGDN 189 Query: 156 PTFGTKVSNYPPCPKPEMIK------GLRAHTDAGGIILLFQDDKVSGLQLLK-DGDWID 208 ++ +YP K E+ K HTD G I LLFQD + GLQ+ +G +ID Sbjct: 190 IL---RLLHYPAV-KSEVFKINPGQVRAGEHTDYGSITLLFQDSR-GGLQVKSPNGQFID 244 Query: 209 VPPLNHSIVINLGDQLEVITNGKYKSVLHRVV-----TQQEGNRMSVASFYNPG--SDAE 261 P+ +++V+N GD L +N KS +HRVV R S+A F NP S E Sbjct: 245 ATPIENTVVVNAGDLLARWSNDTIKSTVHRVVEPPKQEDVHPPRYSIAYFCNPNHKSYIE 304 Query: 262 ISPATSLVEKDSEYPSFVFDDYM 284 P T E + +Y Y+ Sbjct: 305 AIPGTYAAESERKYEGINSGKYL 327 >5LSQ-A nrPDB Length = 359 Score = 184 bits (467), Expect = 4e-47, Method: Composition-based stats. Identities = 56/288 (19%), Positives = 89/288 (30%), Gaps = 47/288 (16%) Query: 25 ALINEACENWGFFEIVNHGLPHDLMDKIEKMTKDHYKTCQEQKF----NDMLKSKGLDNL 80 + +A + G F+I + +K K K + Sbjct: 33 RALIQAWQKDGIFQIKTDSEQDRKTQEAMAASKQFCKEPLTFKSSCVSDLTYSGYVASGE 92 Query: 81 ETEVEDVDWESTFYV------------RHLPQSNLNDISDVSDEYRTAMKDFGKRLENLA 128 E D+ F V P ++ Y+ +MK F + L Sbjct: 93 EVTAGKPDFPEIFTVCKDLSVGDQRVKAGWPCHGPVPWP--NNTYQKSMKTFMEELGLAG 150 Query: 129 EDLLDLLCENLGLEKGYLKKVFHGTKGPTFGTKVSNYPPCPKPEMIKGLRAHTDAGGIIL 188 E LL L L + T+ +V +PP + +G+ AHTD G +++ Sbjct: 151 ERLLKLTALGFELPINTFTDL---TRDGWHHMRVLRFPP-QTSTLSRGIGAHTDYGLLVI 206 Query: 189 LFQDDKVSGLQLL-----------------------KDGDWIDVPPLNHSIVINLGDQLE 225 QDD V GL + D W V P + GD L+ Sbjct: 207 AAQDD-VGGLYIRPPVEGEKRNRNWLPGESSAGMFEHDEPWTFVTPTPGVWTVFPGDILQ 265 Query: 226 VITNGKYKSVLHRVVTQQEGNRMSVASFYNPGSDAEISPATSLVEKDS 273 +T G+ S H+V R + A F+ P +A P + Sbjct: 266 FMTGGQLLSTPHKVKLNTR-ERFACAYFHEPNFEASAYPLFEPSANER 312 >3ON7-A nrPDB Length = 280 Score = 158 bits (398), Expect = 4e-39, Method: Composition-based stats. Identities = 58/279 (20%), Positives = 112/279 (40%), Gaps = 37/279 (13%) Query: 4 NMKFPVVDLSKLNGEERDQTMALINEACENWGFFEIVNHGLPHDLMDKIEKMTKDHYKTC 63 MK +D + E+ GF + NH + +L+++I + + + Sbjct: 1 GMKLETIDYRA------ADSAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNSE 54 Query: 64 QEQKFNDMLKSKGLDNLETEVED------VDWESTFYVRHLPQSNLNDISDVSDEYRTAM 117 + +F ++ + E D + + ++ + D R + Sbjct: 55 AKNEFMFNRETHDGFFPASISETAKGHTVKDIKEYY--------HVYPWGRIPDSLRANI 106 Query: 118 KDFGKRLENLAEDLLDLLCENLGLEKGYLKKVFHGTKGPTFG------TKVSNYPPCPKP 171 + ++ LA +LL+ + +K F ++ +YPP Sbjct: 107 LAYYEKANTLASELLEWIET---YSPDEIKAKFSIPLPEMIANSHKTLLRILHYPPMTGD 163 Query: 172 EMIKGLRA--HTDAGGIILLFQDDKVSGLQLL-KDGDWIDVPPLNHSIVINLGDQLEVIT 228 E + +RA H D I +L ++ GLQ+ KDG W+DVP +I+IN+GD L+ + Sbjct: 164 EEMGAIRAAAHEDINLITVLPTANE-PGLQVKAKDGSWLDVPSDFGNIIINIGDMLQEAS 222 Query: 229 NGKYKSVLHRVV----TQQEGNRMSVASFYNPGSDAEIS 263 +G + S HRV+ T + +R+S+ F +P +S Sbjct: 223 DGYFPSTSHRVINPEGTDKTKSRISLPLFLHPHPSVVLS 261 >1W2A-X nrPDB Length = 331 Score = 74.4 bits (181), Expect = 6e-14, Method: Composition-based stats. Identities = 38/278 (13%), Positives = 84/278 (30%), Gaps = 31/278 (11%) Query: 4 NMKFPVVDLSKLNGEERDQTMALINEACENWGFFEIVNHGLPHDLMDKIEKMTKDHYKTC 63 + P L++L ++ + G F + + GL + + + D ++ Sbjct: 22 DTTVPTFSLAEL---QQGLHQDEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHG 78 Query: 64 QEQK----------FNDMLKSKGLDNLETEVEDVDWESTFYVRHLPQSNLNDISDVSDEY 113 E + ++ + + ++ N S ++ Sbjct: 79 SEAEKRAVTSPVPTMRRGFTGLESESTAQITNTGSYSDYSMCYSMGTAD-NLFP--SGDF 135 Query: 114 RTAMKDFGKRLENLAEDLLDLLCENLGLEKGYLKKVFHGTKGPTFGTKVSNYPPCPK--- 170 + R + + + G E + +P P+ Sbjct: 136 ERIWTQYFDRQYTASRAVAREVLRATGTEPD---GGVEAFLDCEPLLRFRYFPQVPEHRS 192 Query: 171 -PEMIKGLRAHTDAGGIILLFQDDKVSG---LQLLKDGDWIDVPPLNHSIVINLGDQLEV 226 E + H D + L+ Q +G LQ G + D+P ++++ G + Sbjct: 193 AEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEVGGAFTDLPYRPDAVLVFCGAIATL 252 Query: 227 ITNGKYKSVLHRVVTQQEG-----NRMSVASFYNPGSD 259 +T G+ K+ H V + +R S F P +D Sbjct: 253 VTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNAD 290 >3J0A-A nrPDB Length = 844 Score = 30.5 bits (67), Expect = 0.91, Method: Composition-based stats. Identities = 23/142 (16%), Positives = 51/142 (35%), Gaps = 9/142 (6%) Query: 81 ETEVEDVDWESTFYVRHLP-----QSNLNDISDVSDEYRTAMKDFGKRLENLAEDLLDLL 135 E +E++D +++ +P N N S S + + ++L L E++L L Sbjct: 410 ENRLENLDIL--YFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLF-LGENMLQ-L 465 Query: 136 CENLGLEKGYLKKVFHGTKGPTFGTKVSNYPPCPKPEMIKGLRAHTDAGGIILLFQDDKV 195 L + + H +++ PP + ++ + +L +D Sbjct: 466 AWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP 525 Query: 196 SGLQLLKDGDWIDVPPLNHSIV 217 + L++L + P V Sbjct: 526 ANLEILDISRNQLLAPNPDVFV 547 >4KVK-A nrPDB Length = 621 Score = 29.7 bits (65), Expect = 1.9, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 24/60 (40%) Query: 41 NHGLPHDLMDKIEKMTKDHYKTCQEQKFNDMLKSKGLDNLETEVEDVDWESTFYVRHLPQ 100 NHG+P+ L ++ + + H K D +N +ED+D ++ Q Sbjct: 367 NHGVPYSLTEEFTSVYRMHSLIPSTLKLRDPTGQPDANNSPPCLEDIDIGEMIGLKGEEQ 426 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.305 0.126 0.318 Lambda K H 0.267 0.0387 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 11,266,712 Number of Sequences: 36641 Number of extensions: 434955 Number of successful extensions: 1352 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 25 Number of HSP's successfully gapped in prelim test: 17 Number of HSP's that attempted gapping in prelim test: 1265 Number of HSP's gapped (non-prelim): 44 length of query: 320 length of database: 10,336,785 effective HSP length: 97 effective length of query: 223 effective length of database: 6,782,608 effective search space: 1512521584 effective search space used: 1512521584 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 59 (27.4 bits)