BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q38BX0 (461 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 6DFT-A nrPDB 957 0.0 1ROZ-A nrPDB 175 3e-44 4P63-A nrPDB 142 3e-34 6DFT-B nrPDB 72 7e-13 5VXY-A nrPDB 30 2.2 4XJR-A nrPDB 29 3.3 1X6R-A nrPDB 29 3.4 5ZZ8-r nrPDB 29 3.5 6CGR-l nrPDB 29 3.8 1RZO-A nrPDB 29 3.9 2F5U-A nrPDB 29 4.6 5DDZ-A nrPDB 29 5.2 3JUK-A nrPDB 28 6.9 5SV3-B nrPDB 28 7.9 >6DFT-A nrPDB Length = 461 Score = 957 bits (2474), Expect = 0.0, Method: Compositional matrix adjust. Identities = 461/461 (100%), Positives = 461/461 (100%) Query: 1 MAELAKSAVLVSSCTDDLLGDAKQVVVGPNQEDLHSAEAVLNRYSTVGFQASNLARAFSI 60 MAELAKSAVLVSSCTDDLLGDAKQVVVGPNQEDLHSAEAVLNRYSTVGFQASNLARAFSI Sbjct: 1 MAELAKSAVLVSSCTDDLLGDAKQVVVGPNQEDLHSAEAVLNRYSTVGFQASNLARAFSI 60 Query: 61 CEMMLTPQSPSPSLMPTEGDQASESPVMVQPTLFVGVTANLFGTGCREAIRFLCTECVPL 120 CEMMLTPQSPSPSLMPTEGDQASESPVMVQPTLFVGVTANLFGTGCREAIRFLCTECVPL Sbjct: 61 CEMMLTPQSPSPSLMPTEGDQASESPVMVQPTLFVGVTANLFGTGCREAIRFLCTECVPL 120 Query: 121 PNGVEPATPLDDMAGISCDGTGALKPSPCDSRALIHVLVVSGGAMEHDIRRACESYKLSR 180 PNGVEPATPLDDMAGISCDGTGALKPSPCDSRALIHVLVVSGGAMEHDIRRACESYKLSR Sbjct: 121 PNGVEPATPLDDMAGISCDGTGALKPSPCDSRALIHVLVVSGGAMEHDIRRACESYKLSR 180 Query: 181 DGAEEEGEQFHHPVERDRSRSKGTDCHFGNVRYNSSGVASRNLFSCVMRCLVKRLAEAQR 240 DGAEEEGEQFHHPVERDRSRSKGTDCHFGNVRYNSSGVASRNLFSCVMRCLVKRLAEAQR Sbjct: 181 DGAEEEGEQFHHPVERDRSRSKGTDCHFGNVRYNSSGVASRNLFSCVMRCLVKRLAEAQR 240 Query: 241 KEKANREAAPIPEAYYDVCSWAITPSTLWYMAGLWMADIFTEALQETGEVTDEKVASEEG 300 KEKANREAAPIPEAYYDVCSWAITPSTLWYMAGLWMADIFTEALQETGEVTDEKVASEEG Sbjct: 241 KEKANREAAPIPEAYYDVCSWAITPSTLWYMAGLWMADIFTEALQETGEVTDEKVASEEG 300 Query: 301 LKRAKSTVLYWAARNGVPIFSPSLTDGDIMEFILTAGDTGVPLLQLDLVADIHRLNRLAM 360 LKRAKSTVLYWAARNGVPIFSPSLTDGDIMEFILTAGDTGVPLLQLDLVADIHRLNRLAM Sbjct: 301 LKRAKSTVLYWAARNGVPIFSPSLTDGDIMEFILTAGDTGVPLLQLDLVADIHRLNRLAM 360 Query: 361 RSRRTGMMILGGGVVKHHVCNANLMRNGADYAVFLNNAQEFDGSDAGARPGEAVSWGKLR 420 RSRRTGMMILGGGVVKHHVCNANLMRNGADYAVFLNNAQEFDGSDAGARPGEAVSWGKLR Sbjct: 361 RSRRTGMMILGGGVVKHHVCNANLMRNGADYAVFLNNAQEFDGSDAGARPGEAVSWGKLR 420 Query: 421 LDSTAVKVYSEVTIVFPLIVVHVFVAWVRMMRSKGKENIRS 461 LDSTAVKVYSEVTIVFPLIVVHVFVAWVRMMRSKGKENIRS Sbjct: 421 LDSTAVKVYSEVTIVFPLIVVHVFVAWVRMMRSKGKENIRS 461 >1ROZ-A nrPDB Length = 369 Score = 175 bits (444), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 80/138 (57%), Positives = 106/138 (76%), Gaps = 1/138 (0%) Query: 307 TVLYWAARNGVPIFSPSLTDGDIMEFILTAGDTGVPLLQLDLVADIHRLNRLAMRSRRTG 366 +V YWA +N +P+FSP+LTDG + + I P L LD+V D+ +N A+ ++ TG Sbjct: 219 SVYYWAQKNHIPVFSPALTDGSLGDMIFFHSYKN-PGLVLDIVEDLRLINTQAIFAKCTG 277 Query: 367 MMILGGGVVKHHVCNANLMRNGADYAVFLNNAQEFDGSDAGARPGEAVSWGKLRLDSTAV 426 M+ILGGGVVKHH+ NANLMRNGADYAV++N AQEFDGSD+GARP EAVSWGK+R+D+ V Sbjct: 278 MIILGGGVVKHHIANANLMRNGADYAVYINTAQEFDGSDSGARPDEAVSWGKIRVDAQPV 337 Query: 427 KVYSEVTIVFPLIVVHVF 444 KVY++ ++VFPL+V F Sbjct: 338 KVYADASLVFPLLVAETF 355 Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 1/77 (1%) Query: 39 AVLNRYSTVGFQASNLARAFSICEMMLTPQ-SPSPSLMPTEGDQASESPVMVQPTLFVGV 97 A+L + T GFQA+N RA M+ + P D + T+F+G Sbjct: 44 ALLEAFGTTGFQATNFGRAVQQVNAMIEKKLEPLSQDEDQHADLTQSRRPLTSCTIFLGY 103 Query: 98 TANLFGTGCREAIRFLC 114 T+NL +G RE IR+L Sbjct: 104 TSNLISSGIRETIRYLV 120 >4P63-A nrPDB Length = 342 Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 110/422 (26%), Positives = 180/422 (42%), Gaps = 106/422 (25%) Query: 26 VVGPNQEDLHSAEAVLNRYSTVGFQASNLARAFSICEMMLTPQSPSPSLMPTEGDQASES 85 V GP +D S E V++ Y +GFQA++L RA I + + + Sbjct: 19 VKGPWLDDAQSLEEVVSYYYRIGFQATHLGRAIEIWRKVEEKRERGEEI----------- 67 Query: 86 PVMVQPTLFVGVTANLFGTGCREAIRFLCTECVPLPNGVEPATPLDDMAGISCDGTGALK 145 +F+G T+N+ +G RE I +L E Sbjct: 68 ------RVFLGYTSNIISSGLREIIAWLVKE----------------------------- 92 Query: 146 PSPCDSRALIHVLVVSGGAMEHDIRRACESYKLSRDGAEEEGEQFHHPVERDRSRSKGTD 205 + V+V + G +E D ++ + + L V+ R KG + Sbjct: 93 -------KKVDVIVTTAGGVEEDFIKSLKPFILG-----------DWEVDDAELRKKGVN 134 Query: 206 CHFGNVRYNSSGVASRNLFSCVMRCLVKRLAEAQRKEKANREAAPIPEAYYDVCSWAITP 265 GN+ + F M +R+ + + K S +T Sbjct: 135 -RIGNIFVPNDRYIE---FEKYMIPFFERVLKIEEK-----------------LSRPLTA 173 Query: 266 STLWYMAGLWMADIFTEALQETGEVTDEKVASEEGLKRAKSTVLYWAARNGVPIFSPSLT 325 S Y G +M DEK+ E+ + +V+YWA +N +PIF P++T Sbjct: 174 SEFIYEMGRYM---------------DEKLGKEK-----EKSVIYWAYKNNIPIFCPAIT 213 Query: 326 DGDIMEFI-LTAGDTGVPLLQLDLVADIHRLNRLAMRSRRTGMMILGGGVVKHHVCNANL 384 DG I + + + L +D+ DI +LN LA+ ++ T +ILGG + KH + NANL Sbjct: 214 DGSIGDMLYFFKEERRDSRLIIDIANDIVKLNNLAITAKETASIILGGSLPKHAIINANL 273 Query: 385 MRNGADYAVFLNNAQEFDGSDAGARPGEAVSWGKLRLDSTAVKVYSEVTIVFPLIVVHVF 444 R G DYA++++ A +DGS +GA P E VSWGK++ + V+V+ + T++FP++V V Sbjct: 274 FRGGTDYAIYISTAVPWDGSLSGAPPREGVSWGKIKAKADYVEVWGDATLIFPILVWMVM 333 Query: 445 VA 446 A Sbjct: 334 KA 335 >6DFT-B nrPDB Length = 342 Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 19/158 (12%) Query: 306 STVLYWAARNGVPIFSPSLTDGDIMEFILTAGDTGVPLLQLDLVADIHRLNRLAMRSRRT 365 S+++YW RN +P+FSP+ TDG + + I + L+ +D V D+ RL +L +S Sbjct: 193 SSLIYWCYRNDIPVFSPAFTDGSMGDMIYFYNYSRKGLV-VDPVPDVRRLRQLGCKSTNV 251 Query: 366 GM---MILGGGVVKHHVCNANLMRN-GADYAVFLNNAQEFDGSDAGARPGEAVSWGKLRL 421 G ++LG G+ KHH L+RN AD V++ + DG ++ + G L Sbjct: 252 GRITCIVLGAGLPKHH-----LLRNVQADAVVYVTTGSDADGCESSCNVMADRANGLLSP 306 Query: 422 DSTAVKVYSEVTIVFPLIVVHVFVAWVRMMRSKGKENI 459 + V+V+ + TI+ PL++ + S GKE + Sbjct: 307 NCDVVRVHGDATIISPLLL---------LRSSDGKEKV 335 >5VXY-A nrPDB Length = 144 Score = 30.0 bits (66), Expect = 2.2, Method: Composition-based stats. Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 8/76 (10%) Query: 123 GVEPATPLDDMAGISCD----GTGALKPSPCDSRALIHVLVVSGGAMEHDIRRACESYKL 178 G E AT + G++ D GT ALKP P D A I + GGA + + + Sbjct: 62 GTEDATKKEVPLGVAADANKLGTIALKPDPADGTADITLTFTMGGAGPKNKGKIITLTRT 121 Query: 179 SRDG----AEEEGEQF 190 + DG ++ EQF Sbjct: 122 AADGLWKCTSDQDEQF 137 >4XJR-A nrPDB Length = 454 Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust. Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 5/51 (9%) Query: 63 MMLTPQ---SPSPSL--MPTEGDQASESPVMVQPTLFVGVTANLFGTGCRE 108 +M TP+ P P L MPT D +P +V L T+NL GC++ Sbjct: 42 LMKTPKIRLMPGPGLLAMPTTVDGCVRTPSLVINDLIYAYTSNLITRGCQD 92 >1X6R-A nrPDB Length = 123 Score = 29.3 bits (64), Expect = 3.4, Method: Composition-based stats. Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 8/76 (10%) Query: 123 GVEPATPLDDMAGISCD----GTGALKPSPCDSRALIHVLVVSGGAMEHDIRRACESYKL 178 G E AT + G++ D GT ALKP P D A I + GGA + + + Sbjct: 41 GTEDATKKEVPLGVAADANKLGTIALKPDPADGTADITLTFTMGGAGPKNKGKIITLTRT 100 Query: 179 SRDG----AEEEGEQF 190 + DG ++ EQF Sbjct: 101 AADGLWKCTSDQDEQF 116 >5ZZ8-r nrPDB Length = 585 Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust. Identities = 18/44 (40%), Positives = 24/44 (54%) Query: 384 LMRNGADYAVFLNNAQEFDGSDAGARPGEAVSWGKLRLDSTAVK 427 L+ NG YA L+N + GA P EA++ G LDS A+K Sbjct: 396 LLANGNVYADRLDNRLQLGMLIPGAVPAEAIARGASGLDSGAIK 439 >6CGR-l nrPDB Length = 580 Score = 29.3 bits (64), Expect = 3.8, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 6/65 (9%) Query: 363 RRTGMMILGGGVVKHHVCNANLMRNGADYAVFLNNAQEFDGSDAGARPGEAVSWGKLRLD 422 R T I GV++ L+ NG YA LNN + GA P EA++ G D Sbjct: 376 RATANTITALGVIQ------RLLANGNVYADRLNNRLQLGMLIPGAVPSEAIARGASGSD 429 Query: 423 STAVK 427 S A+K Sbjct: 430 SGAIK 434 >1RZO-A nrPDB Length = 262 Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust. Identities = 14/33 (42%), Positives = 19/33 (57%) Query: 34 LHSAEAVLNRYSTVGFQASNLARAFSICEMMLT 66 L A + L YST G Q LAR+F +C M++ Sbjct: 143 LEDAISALYYYSTCGTQIPTLARSFMVCIQMIS 175 >2F5U-A nrPDB Length = 447 Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 6/65 (9%) Query: 363 RRTGMMILGGGVVKHHVCNANLMRNGADYAVFLNNAQEFDGSDAGARPGEAVSWGKLRLD 422 R T I GV++ L+ NG YA LNN + GA P EA++ G D Sbjct: 243 RATANTITALGVIQ------RLLANGNVYADRLNNRLQLGMLIPGAVPSEAIARGASGSD 296 Query: 423 STAVK 427 S A+K Sbjct: 297 SGAIK 301 >5DDZ-A nrPDB Length = 275 Score = 28.9 bits (63), Expect = 5.2, Method: Compositional matrix adjust. Identities = 15/33 (45%), Positives = 19/33 (57%) Query: 34 LHSAEAVLNRYSTVGFQASNLARAFSICEMMLT 66 L A + L YST G Q LAR+F IC M++ Sbjct: 152 LEEAISALYYYSTGGTQLPTLARSFIICIQMIS 184 >3JUK-A nrPDB Length = 281 Score = 28.5 bits (62), Expect = 6.9, Method: Compositional matrix adjust. Identities = 15/44 (34%), Positives = 25/44 (56%) Query: 1 MAELAKSAVLVSSCTDDLLGDAKQVVVGPNQEDLHSAEAVLNRY 44 + E++K V+ ++ + + K +V PNQED S AV+ RY Sbjct: 164 LEEVSKYGVIRGEWLEEGVYEIKDMVEKPNQEDAPSNLAVIGRY 207 >5SV3-B nrPDB Length = 190 Score = 28.1 bits (61), Expect = 7.9, Method: Compositional matrix adjust. Identities = 15/33 (45%), Positives = 19/33 (57%) Query: 34 LHSAEAVLNRYSTVGFQASNLARAFSICEMMLT 66 L A + L YST G Q LAR+F IC M++ Sbjct: 136 LEEAISALYYYSTGGTQLPTLARSFIICIQMIS 168 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 6DFT-A nrPDB 772 0.0 4P63-A nrPDB 450 e-127 1ROZ-A nrPDB 356 1e-98 6DFT-B nrPDB 262 3e-70 Sequences not found previously or not previously below threshold: 5E70-A nrPDB 36 0.041 3U5Z-B nrPDB 32 0.70 5VXY-A nrPDB 31 1.4 4XJR-A nrPDB 30 1.8 1X6R-A nrPDB 30 2.0 5AOO-B nrPDB 29 3.1 5GKA-B nrPDB 29 3.2 CONVERGED! >6DFT-A nrPDB Length = 461 Score = 772 bits (1992), Expect = 0.0, Method: Composition-based stats. Identities = 461/461 (100%), Positives = 461/461 (100%) Query: 1 MAELAKSAVLVSSCTDDLLGDAKQVVVGPNQEDLHSAEAVLNRYSTVGFQASNLARAFSI 60 MAELAKSAVLVSSCTDDLLGDAKQVVVGPNQEDLHSAEAVLNRYSTVGFQASNLARAFSI Sbjct: 1 MAELAKSAVLVSSCTDDLLGDAKQVVVGPNQEDLHSAEAVLNRYSTVGFQASNLARAFSI 60 Query: 61 CEMMLTPQSPSPSLMPTEGDQASESPVMVQPTLFVGVTANLFGTGCREAIRFLCTECVPL 120 CEMMLTPQSPSPSLMPTEGDQASESPVMVQPTLFVGVTANLFGTGCREAIRFLCTECVPL Sbjct: 61 CEMMLTPQSPSPSLMPTEGDQASESPVMVQPTLFVGVTANLFGTGCREAIRFLCTECVPL 120 Query: 121 PNGVEPATPLDDMAGISCDGTGALKPSPCDSRALIHVLVVSGGAMEHDIRRACESYKLSR 180 PNGVEPATPLDDMAGISCDGTGALKPSPCDSRALIHVLVVSGGAMEHDIRRACESYKLSR Sbjct: 121 PNGVEPATPLDDMAGISCDGTGALKPSPCDSRALIHVLVVSGGAMEHDIRRACESYKLSR 180 Query: 181 DGAEEEGEQFHHPVERDRSRSKGTDCHFGNVRYNSSGVASRNLFSCVMRCLVKRLAEAQR 240 DGAEEEGEQFHHPVERDRSRSKGTDCHFGNVRYNSSGVASRNLFSCVMRCLVKRLAEAQR Sbjct: 181 DGAEEEGEQFHHPVERDRSRSKGTDCHFGNVRYNSSGVASRNLFSCVMRCLVKRLAEAQR 240 Query: 241 KEKANREAAPIPEAYYDVCSWAITPSTLWYMAGLWMADIFTEALQETGEVTDEKVASEEG 300 KEKANREAAPIPEAYYDVCSWAITPSTLWYMAGLWMADIFTEALQETGEVTDEKVASEEG Sbjct: 241 KEKANREAAPIPEAYYDVCSWAITPSTLWYMAGLWMADIFTEALQETGEVTDEKVASEEG 300 Query: 301 LKRAKSTVLYWAARNGVPIFSPSLTDGDIMEFILTAGDTGVPLLQLDLVADIHRLNRLAM 360 LKRAKSTVLYWAARNGVPIFSPSLTDGDIMEFILTAGDTGVPLLQLDLVADIHRLNRLAM Sbjct: 301 LKRAKSTVLYWAARNGVPIFSPSLTDGDIMEFILTAGDTGVPLLQLDLVADIHRLNRLAM 360 Query: 361 RSRRTGMMILGGGVVKHHVCNANLMRNGADYAVFLNNAQEFDGSDAGARPGEAVSWGKLR 420 RSRRTGMMILGGGVVKHHVCNANLMRNGADYAVFLNNAQEFDGSDAGARPGEAVSWGKLR Sbjct: 361 RSRRTGMMILGGGVVKHHVCNANLMRNGADYAVFLNNAQEFDGSDAGARPGEAVSWGKLR 420 Query: 421 LDSTAVKVYSEVTIVFPLIVVHVFVAWVRMMRSKGKENIRS 461 LDSTAVKVYSEVTIVFPLIVVHVFVAWVRMMRSKGKENIRS Sbjct: 421 LDSTAVKVYSEVTIVFPLIVVHVFVAWVRMMRSKGKENIRS 461 >4P63-A nrPDB Length = 342 Score = 450 bits (1157), Expect = e-127, Method: Composition-based stats. Identities = 110/422 (26%), Positives = 180/422 (42%), Gaps = 106/422 (25%) Query: 26 VVGPNQEDLHSAEAVLNRYSTVGFQASNLARAFSICEMMLTPQSPSPSLMPTEGDQASES 85 V GP +D S E V++ Y +GFQA++L RA I + + + Sbjct: 19 VKGPWLDDAQSLEEVVSYYYRIGFQATHLGRAIEIWRKVEEKRERGEEI----------- 67 Query: 86 PVMVQPTLFVGVTANLFGTGCREAIRFLCTECVPLPNGVEPATPLDDMAGISCDGTGALK 145 +F+G T+N+ +G RE I +L E Sbjct: 68 ------RVFLGYTSNIISSGLREIIAWLVKE----------------------------- 92 Query: 146 PSPCDSRALIHVLVVSGGAMEHDIRRACESYKLSRDGAEEEGEQFHHPVERDRSRSKGTD 205 + V+V + G +E D ++ + + L V+ R KG + Sbjct: 93 -------KKVDVIVTTAGGVEEDFIKSLKPFILG-----------DWEVDDAELRKKGVN 134 Query: 206 CHFGNVRYNSSGVASRNLFSCVMRCLVKRLAEAQRKEKANREAAPIPEAYYDVCSWAITP 265 GN+ + F M +R+ + + K S +T Sbjct: 135 -RIGNIFVPNDRYIE---FEKYMIPFFERVLKIEEK-----------------LSRPLTA 173 Query: 266 STLWYMAGLWMADIFTEALQETGEVTDEKVASEEGLKRAKSTVLYWAARNGVPIFSPSLT 325 S Y G +M DEK+ E+ + +V+YWA +N +PIF P++T Sbjct: 174 SEFIYEMGRYM---------------DEKLGKEK-----EKSVIYWAYKNNIPIFCPAIT 213 Query: 326 DGDIMEFI-LTAGDTGVPLLQLDLVADIHRLNRLAMRSRRTGMMILGGGVVKHHVCNANL 384 DG I + + + L +D+ DI +LN LA+ ++ T +ILGG + KH + NANL Sbjct: 214 DGSIGDMLYFFKEERRDSRLIIDIANDIVKLNNLAITAKETASIILGGSLPKHAIINANL 273 Query: 385 MRNGADYAVFLNNAQEFDGSDAGARPGEAVSWGKLRLDSTAVKVYSEVTIVFPLIVVHVF 444 R G DYA++++ A +DGS +GA P E VSWGK++ + V+V+ + T++FP++V V Sbjct: 274 FRGGTDYAIYISTAVPWDGSLSGAPPREGVSWGKIKAKADYVEVWGDATLIFPILVWMVM 333 Query: 445 VA 446 A Sbjct: 334 KA 335 >1ROZ-A nrPDB Length = 369 Score = 356 bits (913), Expect = 1e-98, Method: Composition-based stats. Identities = 132/441 (29%), Positives = 190/441 (43%), Gaps = 99/441 (22%) Query: 5 AKSAVLVSSCTDDLLGDAKQVVVGPNQEDLHSAEAVLNRYSTVGFQASNLARAFSICEMM 64 A +AVL S T L V G + + A+L + T GFQA+N RA M Sbjct: 13 ALAAVLKHSST---LPPESTQVRGYDFNRGVNYRALLEAFGTTGFQATNFGRAVQQVNAM 69 Query: 65 LTPQ-SPSPSLMPTEGDQASESPVMVQPTLFVGVTANLFGTGCREAIRFLCTECVPLPNG 123 + + P D + T+F+G T+NL +G RE IR+L Sbjct: 70 IEKKLEPLSQDEDQHADLTQSRRPLTSCTIFLGYTSNLISSGIRETIRYLVQH------- 122 Query: 124 VEPATPLDDMAGISCDGTGALKPSPCDSRALIHVLVVSGGAMEHDIRRACESYKLSRDGA 183 ++ VLV + G +E D+ + L Sbjct: 123 -----------------------------NMVDVLVTTAGGVEEDLIKCLAPTYLG---- 149 Query: 184 EEEGEQFHHPVERDRSRSKGTDCHFGNVRYNSSGVASRNLFSCVMRCLVKRLAEAQRKEK 243 + R G + GN+ + F + ++ ++ Q E Sbjct: 150 -------EFSLRGKELRENGIN-RIGNLLVPNENYCK---FEDWLMPILDQMVMEQNTEG 198 Query: 244 ANREAAPIPEAYYDVCSWAITPSTLWYMAGLWMADIFTEALQETGEVTDEKVASEEGLKR 303 TPS + ++ E Sbjct: 199 VKW-----------------TPSKMI-----------------------ARLGKE---IN 215 Query: 304 AKSTVLYWAARNGVPIFSPSLTDGDIMEFILTAGDTGVPLLQLDLVADIHRLNRLAMRSR 363 +V YWA +N +P+FSP+LTDG + + I P L LD+V D+ +N A+ ++ Sbjct: 216 NPESVYYWAQKNHIPVFSPALTDGSLGDMIFFHSYKN-PGLVLDIVEDLRLINTQAIFAK 274 Query: 364 RTGMMILGGGVVKHHVCNANLMRNGADYAVFLNNAQEFDGSDAGARPGEAVSWGKLRLDS 423 TGM+ILGGGVVKHH+ NANLMRNGADYAV++N AQEFDGSD+GARP EAVSWGK+R+D+ Sbjct: 275 CTGMIILGGGVVKHHIANANLMRNGADYAVYINTAQEFDGSDSGARPDEAVSWGKIRVDA 334 Query: 424 TAVKVYSEVTIVFPLIVVHVF 444 VKVY++ ++VFPL+V F Sbjct: 335 QPVKVYADASLVFPLLVAETF 355 >6DFT-B nrPDB Length = 342 Score = 262 bits (669), Expect = 3e-70, Method: Composition-based stats. Identities = 92/434 (21%), Positives = 151/434 (34%), Gaps = 123/434 (28%) Query: 30 NQEDLHSAEAVLNRYSTVGFQASNLARAFSICEMMLTPQSPSPSLMPTEGDQASESPVMV 89 N + VLN Y +G +A+NL RA I + L M Sbjct: 21 NIGQEEAIRCVLNAYPNIGLEATNLGRARRIVQRAL------------------NDNGMD 62 Query: 90 QPTLFVGVTANLFGTGCREAIRFLCTECVPLPNGVEPATPLDDMAGISCDGTGALKPSPC 149 + + T+NL +G R+ L E Sbjct: 63 GNKVMLAYTSNLISSGLRDTFACLARE--------------------------------- 89 Query: 150 DSRALIHVLVVSGGAMEHDIRRACESYKLSRDGAEEEGEQFHHPVERDRSRSKGTDCHFG 209 I +V + G +E D+ + + + R+ G + G Sbjct: 90 ---NRIGAVVTTAGGVEEDVIKCLGDTLVG-----------DFALNDHALRNNGLN-RVG 134 Query: 210 NVRYNSSGVASRNLFSCVMRCLVKRLAEAQRKEKANREAAPIPEAYYDVCSWAITPSTLW 269 N+ + F L++RL E QR + + TPS + Sbjct: 135 NLLVPNDNY---RNFEDFFVPLLRRLHEQQRDSRWTTKT---------------TPSQII 176 Query: 270 YMAGLWMADIFTEALQETGEVTDEKVASEEGLKRAKSTVLYWAARNGVPIFSPSLTDGDI 329 G A E+ D S+++YW RN +P+FSP+ TDG + Sbjct: 177 AEIG---------AALESVRPND-----------CGSSLIYWCYRNDIPVFSPAFTDGSM 216 Query: 330 MEFILTAGDTGVPLLQLDLVADIHRLNRLAMRSRRTGMM---ILGGGVVKHHVCNANLMR 386 + I + L +D V D+ RL +L +S G + +LG G+ KHH L+R Sbjct: 217 GDMIYFYNYSRKG-LVVDPVPDVRRLRQLGCKSTNVGRITCIVLGAGLPKHH-----LLR 270 Query: 387 N-GADYAVFLNNAQEFDGSDAGARPGEAVSWGKLRLDSTAVKVYSEVTIVFPLIVVHVFV 445 N AD V++ + DG ++ + G L + V+V+ + TI+ PL++ Sbjct: 271 NVQADAVVYVTTGSDADGCESSCNVMADRANGLLSPNCDVVRVHGDATIISPLLL----- 325 Query: 446 AWVRMMRSKGKENI 459 + S GKE + Sbjct: 326 ----LRSSDGKEKV 335 >5E70-A nrPDB Length = 612 Score = 35.6 bits (80), Expect = 0.041, Method: Composition-based stats. Identities = 30/152 (19%), Positives = 53/152 (34%), Gaps = 20/152 (13%) Query: 209 GNVRYNSSGVASRNLFSCVMRC--------LVKRLAEAQRKEKANREAAPIPEAYYDVCS 260 GN+R S A F MR L +++ + + ++KAN+ API + S Sbjct: 81 GNLRLKSDPYA----FEAQMRPETASLICGLPEKVVQTEERKKANQFDAPISIYEVHLGS 136 Query: 261 WAITPSTLWYMAGLWMADIFTEALQETGEVTDEKVASEEGLKRAKSTVLYWAARNGVPIF 320 W ++++ +AD + G E + E W + ++ Sbjct: 137 WRRHTDNNFWLSYRELADQLVPYAKWMGFTHLELLPINEHPFDGS-----WGYQ-PTGLY 190 Query: 321 SPSLTDGDIMEFILTAGDTGVPLL--QLDLVA 350 +P+ G +F L LD V Sbjct: 191 APTRRFGTRDDFRYFIDAAHAAGLNVILDWVP 222 >3U5Z-B nrPDB Length = 324 Score = 31.8 bits (70), Expect = 0.70, Method: Composition-based stats. Identities = 43/226 (19%), Positives = 74/226 (32%), Gaps = 32/226 (14%) Query: 159 VVSGGAMEHDIRRACESYKLSRDGAEEEGEQFHHPVERDRSRSKGTDCHFGNVRYNSSGV 218 + S G + H I + G + H V D G+DC VR + Sbjct: 41 ITSKGKIPHIILHSPSP----GTGKTTVAKALCHDVNADMMFVNGSDCKIDFVRGPLTNF 96 Query: 219 ASRNLFSCVMRCLVKRLAEAQRKEKANREAAPIPEAYYDVCSWAITPSTLWYMAGLWMAD 278 AS F + +V + ++ R EAY CS IT + + G+ Sbjct: 97 ASAASFDGRQKVIVIDEFDRSGLAESQRHLRSFMEAYSSNCSIIITANNI---DGIIKPL 153 Query: 279 IFTEALQETGEVTDE--------------KVASEEGLKRAKSTVLYWAARNGVPIFSP-- 322 + G+ TDE ++ EG+ A V+ + P F Sbjct: 154 QSRCRVITFGQPTDEDKIEMMKQMIRRLTEICKHEGIAIADMKVVAALVKKNFPDFRKTI 213 Query: 323 ----SLTDGDIMEFILTAGDTGVPLLQLDLVA-----DIHRLNRLA 359 S + +++ + + T D++ D+ +L LA Sbjct: 214 GELDSYSSKGVLDAGILSLVTNDRGAIDDVLESLKNKDVKQLRALA 259 >5VXY-A nrPDB Length = 144 Score = 30.6 bits (67), Expect = 1.4, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 27/69 (39%), Gaps = 2/69 (2%) Query: 98 TANLFGTGCREAIR--FLCTECVPLPNGVEPATPLDDMAGISCDGTGALKPSPCDSRALI 155 + N T EA+ + + + PL A + GT ALKP P D A I Sbjct: 39 SVNPLKTTVEEALSRGWSVKSGTGTEDATKKEVPLGVAADANKLGTIALKPDPADGTADI 98 Query: 156 HVLVVSGGA 164 + GGA Sbjct: 99 TLTFTMGGA 107 >4XJR-A nrPDB Length = 454 Score = 30.2 bits (66), Expect = 1.8, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 2/42 (4%) Query: 70 PSPSL--MPTEGDQASESPVMVQPTLFVGVTANLFGTGCREA 109 P P L MPT D +P +V L T+NL GC++ Sbjct: 52 PGPGLLAMPTTVDGCVRTPSLVINDLIYAYTSNLITRGCQDI 93 >1X6R-A nrPDB Length = 123 Score = 30.2 bits (66), Expect = 2.0, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 27/69 (39%), Gaps = 2/69 (2%) Query: 98 TANLFGTGCREAIR--FLCTECVPLPNGVEPATPLDDMAGISCDGTGALKPSPCDSRALI 155 + N T EA+ + + + PL A + GT ALKP P D A I Sbjct: 18 SVNPLKTTVEEALSRGWSVKSGTGTEDATKKEVPLGVAADANKLGTIALKPDPADGTADI 77 Query: 156 HVLVVSGGA 164 + GGA Sbjct: 78 TLTFTMGGA 86 >5AOO-B nrPDB Length = 370 Score = 29.5 bits (64), Expect = 3.1, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 34/100 (34%), Gaps = 5/100 (5%) Query: 30 NQEDLHSAEAVLNRYSTVGFQASNLARAFSICEMMLTPQSPSPSLMPTEGDQASESPVMV 89 + A + G A+ A + +I + P +PS + P A Sbjct: 73 WEPAAARASESATDSAIEGIDAAGKAASKAITRKLDRPAAPSSTANPQPSLIALNPSATQ 132 Query: 90 QPTLFVGVTANLFGTGCREAIRFLCTECVPLPNGVEPATP 129 G + L G+ + + VPLPN EP+ P Sbjct: 133 S-----GNASILTGSTAPSLLAYPTATPVPLPNPDEPSQP 167 >5GKA-B nrPDB Length = 367 Score = 29.5 bits (64), Expect = 3.2, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 34/100 (34%), Gaps = 5/100 (5%) Query: 30 NQEDLHSAEAVLNRYSTVGFQASNLARAFSICEMMLTPQSPSPSLMPTEGDQASESPVMV 89 + A + G A+ A + +I + P +PS + P A Sbjct: 70 WEPAAARASESATDSAIEGIDAAGKAASKAITRKLDRPAAPSSTANPQPSLIALNPSATQ 129 Query: 90 QPTLFVGVTANLFGTGCREAIRFLCTECVPLPNGVEPATP 129 G + L G+ + + VPLPN EP+ P Sbjct: 130 S-----GNASILTGSTAPSLLAYPTATPVPLPNPDEPSQP 164 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.310 0.117 0.297 Lambda K H 0.267 0.0349 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 14,713,471 Number of Sequences: 36641 Number of extensions: 524683 Number of successful extensions: 1252 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 17 Number of HSP's successfully gapped in prelim test: 11 Number of HSP's that attempted gapping in prelim test: 1207 Number of HSP's gapped (non-prelim): 35 length of query: 461 length of database: 10,336,785 effective HSP length: 100 effective length of query: 361 effective length of database: 6,672,685 effective search space: 2408839285 effective search space used: 2408839285 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 60 (28.0 bits)