BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= Q38BX0
         (461 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

6DFT-A nrPDB                                                          957   0.0  
1ROZ-A nrPDB                                                          175   3e-44
4P63-A nrPDB                                                          142   3e-34
6DFT-B nrPDB                                                           72   7e-13
5VXY-A nrPDB                                                           30   2.2  
4XJR-A nrPDB                                                           29   3.3  
1X6R-A nrPDB                                                           29   3.4  
5ZZ8-r nrPDB                                                           29   3.5  
6CGR-l nrPDB                                                           29   3.8  
1RZO-A nrPDB                                                           29   3.9  
2F5U-A nrPDB                                                           29   4.6  
5DDZ-A nrPDB                                                           29   5.2  
3JUK-A nrPDB                                                           28   6.9  
5SV3-B nrPDB                                                           28   7.9  

>6DFT-A nrPDB
          Length = 461

 Score =  957 bits (2474), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 461/461 (100%), Positives = 461/461 (100%)

Query: 1   MAELAKSAVLVSSCTDDLLGDAKQVVVGPNQEDLHSAEAVLNRYSTVGFQASNLARAFSI 60
           MAELAKSAVLVSSCTDDLLGDAKQVVVGPNQEDLHSAEAVLNRYSTVGFQASNLARAFSI
Sbjct: 1   MAELAKSAVLVSSCTDDLLGDAKQVVVGPNQEDLHSAEAVLNRYSTVGFQASNLARAFSI 60

Query: 61  CEMMLTPQSPSPSLMPTEGDQASESPVMVQPTLFVGVTANLFGTGCREAIRFLCTECVPL 120
           CEMMLTPQSPSPSLMPTEGDQASESPVMVQPTLFVGVTANLFGTGCREAIRFLCTECVPL
Sbjct: 61  CEMMLTPQSPSPSLMPTEGDQASESPVMVQPTLFVGVTANLFGTGCREAIRFLCTECVPL 120

Query: 121 PNGVEPATPLDDMAGISCDGTGALKPSPCDSRALIHVLVVSGGAMEHDIRRACESYKLSR 180
           PNGVEPATPLDDMAGISCDGTGALKPSPCDSRALIHVLVVSGGAMEHDIRRACESYKLSR
Sbjct: 121 PNGVEPATPLDDMAGISCDGTGALKPSPCDSRALIHVLVVSGGAMEHDIRRACESYKLSR 180

Query: 181 DGAEEEGEQFHHPVERDRSRSKGTDCHFGNVRYNSSGVASRNLFSCVMRCLVKRLAEAQR 240
           DGAEEEGEQFHHPVERDRSRSKGTDCHFGNVRYNSSGVASRNLFSCVMRCLVKRLAEAQR
Sbjct: 181 DGAEEEGEQFHHPVERDRSRSKGTDCHFGNVRYNSSGVASRNLFSCVMRCLVKRLAEAQR 240

Query: 241 KEKANREAAPIPEAYYDVCSWAITPSTLWYMAGLWMADIFTEALQETGEVTDEKVASEEG 300
           KEKANREAAPIPEAYYDVCSWAITPSTLWYMAGLWMADIFTEALQETGEVTDEKVASEEG
Sbjct: 241 KEKANREAAPIPEAYYDVCSWAITPSTLWYMAGLWMADIFTEALQETGEVTDEKVASEEG 300

Query: 301 LKRAKSTVLYWAARNGVPIFSPSLTDGDIMEFILTAGDTGVPLLQLDLVADIHRLNRLAM 360
           LKRAKSTVLYWAARNGVPIFSPSLTDGDIMEFILTAGDTGVPLLQLDLVADIHRLNRLAM
Sbjct: 301 LKRAKSTVLYWAARNGVPIFSPSLTDGDIMEFILTAGDTGVPLLQLDLVADIHRLNRLAM 360

Query: 361 RSRRTGMMILGGGVVKHHVCNANLMRNGADYAVFLNNAQEFDGSDAGARPGEAVSWGKLR 420
           RSRRTGMMILGGGVVKHHVCNANLMRNGADYAVFLNNAQEFDGSDAGARPGEAVSWGKLR
Sbjct: 361 RSRRTGMMILGGGVVKHHVCNANLMRNGADYAVFLNNAQEFDGSDAGARPGEAVSWGKLR 420

Query: 421 LDSTAVKVYSEVTIVFPLIVVHVFVAWVRMMRSKGKENIRS 461
           LDSTAVKVYSEVTIVFPLIVVHVFVAWVRMMRSKGKENIRS
Sbjct: 421 LDSTAVKVYSEVTIVFPLIVVHVFVAWVRMMRSKGKENIRS 461


>1ROZ-A nrPDB
          Length = 369

 Score =  175 bits (444), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 80/138 (57%), Positives = 106/138 (76%), Gaps = 1/138 (0%)

Query: 307 TVLYWAARNGVPIFSPSLTDGDIMEFILTAGDTGVPLLQLDLVADIHRLNRLAMRSRRTG 366
           +V YWA +N +P+FSP+LTDG + + I        P L LD+V D+  +N  A+ ++ TG
Sbjct: 219 SVYYWAQKNHIPVFSPALTDGSLGDMIFFHSYKN-PGLVLDIVEDLRLINTQAIFAKCTG 277

Query: 367 MMILGGGVVKHHVCNANLMRNGADYAVFLNNAQEFDGSDAGARPGEAVSWGKLRLDSTAV 426
           M+ILGGGVVKHH+ NANLMRNGADYAV++N AQEFDGSD+GARP EAVSWGK+R+D+  V
Sbjct: 278 MIILGGGVVKHHIANANLMRNGADYAVYINTAQEFDGSDSGARPDEAVSWGKIRVDAQPV 337

Query: 427 KVYSEVTIVFPLIVVHVF 444
           KVY++ ++VFPL+V   F
Sbjct: 338 KVYADASLVFPLLVAETF 355



 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 1/77 (1%)

Query: 39  AVLNRYSTVGFQASNLARAFSICEMMLTPQ-SPSPSLMPTEGDQASESPVMVQPTLFVGV 97
           A+L  + T GFQA+N  RA      M+  +  P         D       +   T+F+G 
Sbjct: 44  ALLEAFGTTGFQATNFGRAVQQVNAMIEKKLEPLSQDEDQHADLTQSRRPLTSCTIFLGY 103

Query: 98  TANLFGTGCREAIRFLC 114
           T+NL  +G RE IR+L 
Sbjct: 104 TSNLISSGIRETIRYLV 120


>4P63-A nrPDB
          Length = 342

 Score =  142 bits (358), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 110/422 (26%), Positives = 180/422 (42%), Gaps = 106/422 (25%)

Query: 26  VVGPNQEDLHSAEAVLNRYSTVGFQASNLARAFSICEMMLTPQSPSPSLMPTEGDQASES 85
           V GP  +D  S E V++ Y  +GFQA++L RA  I   +   +     +           
Sbjct: 19  VKGPWLDDAQSLEEVVSYYYRIGFQATHLGRAIEIWRKVEEKRERGEEI----------- 67

Query: 86  PVMVQPTLFVGVTANLFGTGCREAIRFLCTECVPLPNGVEPATPLDDMAGISCDGTGALK 145
                  +F+G T+N+  +G RE I +L  E                             
Sbjct: 68  ------RVFLGYTSNIISSGLREIIAWLVKE----------------------------- 92

Query: 146 PSPCDSRALIHVLVVSGGAMEHDIRRACESYKLSRDGAEEEGEQFHHPVERDRSRSKGTD 205
                    + V+V + G +E D  ++ + + L               V+    R KG +
Sbjct: 93  -------KKVDVIVTTAGGVEEDFIKSLKPFILG-----------DWEVDDAELRKKGVN 134

Query: 206 CHFGNVRYNSSGVASRNLFSCVMRCLVKRLAEAQRKEKANREAAPIPEAYYDVCSWAITP 265
              GN+   +        F   M    +R+ + + K                  S  +T 
Sbjct: 135 -RIGNIFVPNDRYIE---FEKYMIPFFERVLKIEEK-----------------LSRPLTA 173

Query: 266 STLWYMAGLWMADIFTEALQETGEVTDEKVASEEGLKRAKSTVLYWAARNGVPIFSPSLT 325
           S   Y  G +M               DEK+  E+     + +V+YWA +N +PIF P++T
Sbjct: 174 SEFIYEMGRYM---------------DEKLGKEK-----EKSVIYWAYKNNIPIFCPAIT 213

Query: 326 DGDIMEFI-LTAGDTGVPLLQLDLVADIHRLNRLAMRSRRTGMMILGGGVVKHHVCNANL 384
           DG I + +     +     L +D+  DI +LN LA+ ++ T  +ILGG + KH + NANL
Sbjct: 214 DGSIGDMLYFFKEERRDSRLIIDIANDIVKLNNLAITAKETASIILGGSLPKHAIINANL 273

Query: 385 MRNGADYAVFLNNAQEFDGSDAGARPGEAVSWGKLRLDSTAVKVYSEVTIVFPLIVVHVF 444
            R G DYA++++ A  +DGS +GA P E VSWGK++  +  V+V+ + T++FP++V  V 
Sbjct: 274 FRGGTDYAIYISTAVPWDGSLSGAPPREGVSWGKIKAKADYVEVWGDATLIFPILVWMVM 333

Query: 445 VA 446
            A
Sbjct: 334 KA 335


>6DFT-B nrPDB
          Length = 342

 Score = 71.6 bits (174), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 19/158 (12%)

Query: 306 STVLYWAARNGVPIFSPSLTDGDIMEFILTAGDTGVPLLQLDLVADIHRLNRLAMRSRRT 365
           S+++YW  RN +P+FSP+ TDG + + I     +   L+ +D V D+ RL +L  +S   
Sbjct: 193 SSLIYWCYRNDIPVFSPAFTDGSMGDMIYFYNYSRKGLV-VDPVPDVRRLRQLGCKSTNV 251

Query: 366 GM---MILGGGVVKHHVCNANLMRN-GADYAVFLNNAQEFDGSDAGARPGEAVSWGKLRL 421
           G    ++LG G+ KHH     L+RN  AD  V++    + DG ++        + G L  
Sbjct: 252 GRITCIVLGAGLPKHH-----LLRNVQADAVVYVTTGSDADGCESSCNVMADRANGLLSP 306

Query: 422 DSTAVKVYSEVTIVFPLIVVHVFVAWVRMMRSKGKENI 459
           +   V+V+ + TI+ PL++         +  S GKE +
Sbjct: 307 NCDVVRVHGDATIISPLLL---------LRSSDGKEKV 335


>5VXY-A nrPDB
          Length = 144

 Score = 30.0 bits (66), Expect = 2.2,   Method: Composition-based stats.
 Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 8/76 (10%)

Query: 123 GVEPATPLDDMAGISCD----GTGALKPSPCDSRALIHVLVVSGGAMEHDIRRACESYKL 178
           G E AT  +   G++ D    GT ALKP P D  A I +    GGA   +  +     + 
Sbjct: 62  GTEDATKKEVPLGVAADANKLGTIALKPDPADGTADITLTFTMGGAGPKNKGKIITLTRT 121

Query: 179 SRDG----AEEEGEQF 190
           + DG      ++ EQF
Sbjct: 122 AADGLWKCTSDQDEQF 137


>4XJR-A nrPDB
          Length = 454

 Score = 29.3 bits (64), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 5/51 (9%)

Query: 63  MMLTPQ---SPSPSL--MPTEGDQASESPVMVQPTLFVGVTANLFGTGCRE 108
           +M TP+    P P L  MPT  D    +P +V   L    T+NL   GC++
Sbjct: 42  LMKTPKIRLMPGPGLLAMPTTVDGCVRTPSLVINDLIYAYTSNLITRGCQD 92


>1X6R-A nrPDB
          Length = 123

 Score = 29.3 bits (64), Expect = 3.4,   Method: Composition-based stats.
 Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 8/76 (10%)

Query: 123 GVEPATPLDDMAGISCD----GTGALKPSPCDSRALIHVLVVSGGAMEHDIRRACESYKL 178
           G E AT  +   G++ D    GT ALKP P D  A I +    GGA   +  +     + 
Sbjct: 41  GTEDATKKEVPLGVAADANKLGTIALKPDPADGTADITLTFTMGGAGPKNKGKIITLTRT 100

Query: 179 SRDG----AEEEGEQF 190
           + DG      ++ EQF
Sbjct: 101 AADGLWKCTSDQDEQF 116


>5ZZ8-r nrPDB
          Length = 585

 Score = 29.3 bits (64), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 18/44 (40%), Positives = 24/44 (54%)

Query: 384 LMRNGADYAVFLNNAQEFDGSDAGARPGEAVSWGKLRLDSTAVK 427
           L+ NG  YA  L+N  +      GA P EA++ G   LDS A+K
Sbjct: 396 LLANGNVYADRLDNRLQLGMLIPGAVPAEAIARGASGLDSGAIK 439


>6CGR-l nrPDB
          Length = 580

 Score = 29.3 bits (64), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 6/65 (9%)

Query: 363 RRTGMMILGGGVVKHHVCNANLMRNGADYAVFLNNAQEFDGSDAGARPGEAVSWGKLRLD 422
           R T   I   GV++       L+ NG  YA  LNN  +      GA P EA++ G    D
Sbjct: 376 RATANTITALGVIQ------RLLANGNVYADRLNNRLQLGMLIPGAVPSEAIARGASGSD 429

Query: 423 STAVK 427
           S A+K
Sbjct: 430 SGAIK 434


>1RZO-A nrPDB
          Length = 262

 Score = 29.3 bits (64), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 14/33 (42%), Positives = 19/33 (57%)

Query: 34  LHSAEAVLNRYSTVGFQASNLARAFSICEMMLT 66
           L  A + L  YST G Q   LAR+F +C  M++
Sbjct: 143 LEDAISALYYYSTCGTQIPTLARSFMVCIQMIS 175


>2F5U-A nrPDB
          Length = 447

 Score = 28.9 bits (63), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 6/65 (9%)

Query: 363 RRTGMMILGGGVVKHHVCNANLMRNGADYAVFLNNAQEFDGSDAGARPGEAVSWGKLRLD 422
           R T   I   GV++       L+ NG  YA  LNN  +      GA P EA++ G    D
Sbjct: 243 RATANTITALGVIQ------RLLANGNVYADRLNNRLQLGMLIPGAVPSEAIARGASGSD 296

Query: 423 STAVK 427
           S A+K
Sbjct: 297 SGAIK 301


>5DDZ-A nrPDB
          Length = 275

 Score = 28.9 bits (63), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 15/33 (45%), Positives = 19/33 (57%)

Query: 34  LHSAEAVLNRYSTVGFQASNLARAFSICEMMLT 66
           L  A + L  YST G Q   LAR+F IC  M++
Sbjct: 152 LEEAISALYYYSTGGTQLPTLARSFIICIQMIS 184


>3JUK-A nrPDB
          Length = 281

 Score = 28.5 bits (62), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 15/44 (34%), Positives = 25/44 (56%)

Query: 1   MAELAKSAVLVSSCTDDLLGDAKQVVVGPNQEDLHSAEAVLNRY 44
           + E++K  V+     ++ + + K +V  PNQED  S  AV+ RY
Sbjct: 164 LEEVSKYGVIRGEWLEEGVYEIKDMVEKPNQEDAPSNLAVIGRY 207


>5SV3-B nrPDB
          Length = 190

 Score = 28.1 bits (61), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 15/33 (45%), Positives = 19/33 (57%)

Query: 34  LHSAEAVLNRYSTVGFQASNLARAFSICEMMLT 66
           L  A + L  YST G Q   LAR+F IC  M++
Sbjct: 136 LEEAISALYYYSTGGTQLPTLARSFIICIQMIS 168


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

6DFT-A nrPDB                                                          772   0.0  
4P63-A nrPDB                                                          450   e-127
1ROZ-A nrPDB                                                          356   1e-98
6DFT-B nrPDB                                                          262   3e-70

Sequences not found previously or not previously below threshold:

5E70-A nrPDB                                                           36   0.041
3U5Z-B nrPDB                                                           32   0.70 
5VXY-A nrPDB                                                           31   1.4  
4XJR-A nrPDB                                                           30   1.8  
1X6R-A nrPDB                                                           30   2.0  
5AOO-B nrPDB                                                           29   3.1  
5GKA-B nrPDB                                                           29   3.2  


CONVERGED!
>6DFT-A nrPDB
          Length = 461

 Score =  772 bits (1992), Expect = 0.0,   Method: Composition-based stats.
 Identities = 461/461 (100%), Positives = 461/461 (100%)

Query: 1   MAELAKSAVLVSSCTDDLLGDAKQVVVGPNQEDLHSAEAVLNRYSTVGFQASNLARAFSI 60
           MAELAKSAVLVSSCTDDLLGDAKQVVVGPNQEDLHSAEAVLNRYSTVGFQASNLARAFSI
Sbjct: 1   MAELAKSAVLVSSCTDDLLGDAKQVVVGPNQEDLHSAEAVLNRYSTVGFQASNLARAFSI 60

Query: 61  CEMMLTPQSPSPSLMPTEGDQASESPVMVQPTLFVGVTANLFGTGCREAIRFLCTECVPL 120
           CEMMLTPQSPSPSLMPTEGDQASESPVMVQPTLFVGVTANLFGTGCREAIRFLCTECVPL
Sbjct: 61  CEMMLTPQSPSPSLMPTEGDQASESPVMVQPTLFVGVTANLFGTGCREAIRFLCTECVPL 120

Query: 121 PNGVEPATPLDDMAGISCDGTGALKPSPCDSRALIHVLVVSGGAMEHDIRRACESYKLSR 180
           PNGVEPATPLDDMAGISCDGTGALKPSPCDSRALIHVLVVSGGAMEHDIRRACESYKLSR
Sbjct: 121 PNGVEPATPLDDMAGISCDGTGALKPSPCDSRALIHVLVVSGGAMEHDIRRACESYKLSR 180

Query: 181 DGAEEEGEQFHHPVERDRSRSKGTDCHFGNVRYNSSGVASRNLFSCVMRCLVKRLAEAQR 240
           DGAEEEGEQFHHPVERDRSRSKGTDCHFGNVRYNSSGVASRNLFSCVMRCLVKRLAEAQR
Sbjct: 181 DGAEEEGEQFHHPVERDRSRSKGTDCHFGNVRYNSSGVASRNLFSCVMRCLVKRLAEAQR 240

Query: 241 KEKANREAAPIPEAYYDVCSWAITPSTLWYMAGLWMADIFTEALQETGEVTDEKVASEEG 300
           KEKANREAAPIPEAYYDVCSWAITPSTLWYMAGLWMADIFTEALQETGEVTDEKVASEEG
Sbjct: 241 KEKANREAAPIPEAYYDVCSWAITPSTLWYMAGLWMADIFTEALQETGEVTDEKVASEEG 300

Query: 301 LKRAKSTVLYWAARNGVPIFSPSLTDGDIMEFILTAGDTGVPLLQLDLVADIHRLNRLAM 360
           LKRAKSTVLYWAARNGVPIFSPSLTDGDIMEFILTAGDTGVPLLQLDLVADIHRLNRLAM
Sbjct: 301 LKRAKSTVLYWAARNGVPIFSPSLTDGDIMEFILTAGDTGVPLLQLDLVADIHRLNRLAM 360

Query: 361 RSRRTGMMILGGGVVKHHVCNANLMRNGADYAVFLNNAQEFDGSDAGARPGEAVSWGKLR 420
           RSRRTGMMILGGGVVKHHVCNANLMRNGADYAVFLNNAQEFDGSDAGARPGEAVSWGKLR
Sbjct: 361 RSRRTGMMILGGGVVKHHVCNANLMRNGADYAVFLNNAQEFDGSDAGARPGEAVSWGKLR 420

Query: 421 LDSTAVKVYSEVTIVFPLIVVHVFVAWVRMMRSKGKENIRS 461
           LDSTAVKVYSEVTIVFPLIVVHVFVAWVRMMRSKGKENIRS
Sbjct: 421 LDSTAVKVYSEVTIVFPLIVVHVFVAWVRMMRSKGKENIRS 461


>4P63-A nrPDB
          Length = 342

 Score =  450 bits (1157), Expect = e-127,   Method: Composition-based stats.
 Identities = 110/422 (26%), Positives = 180/422 (42%), Gaps = 106/422 (25%)

Query: 26  VVGPNQEDLHSAEAVLNRYSTVGFQASNLARAFSICEMMLTPQSPSPSLMPTEGDQASES 85
           V GP  +D  S E V++ Y  +GFQA++L RA  I   +   +     +           
Sbjct: 19  VKGPWLDDAQSLEEVVSYYYRIGFQATHLGRAIEIWRKVEEKRERGEEI----------- 67

Query: 86  PVMVQPTLFVGVTANLFGTGCREAIRFLCTECVPLPNGVEPATPLDDMAGISCDGTGALK 145
                  +F+G T+N+  +G RE I +L  E                             
Sbjct: 68  ------RVFLGYTSNIISSGLREIIAWLVKE----------------------------- 92

Query: 146 PSPCDSRALIHVLVVSGGAMEHDIRRACESYKLSRDGAEEEGEQFHHPVERDRSRSKGTD 205
                    + V+V + G +E D  ++ + + L               V+    R KG +
Sbjct: 93  -------KKVDVIVTTAGGVEEDFIKSLKPFILG-----------DWEVDDAELRKKGVN 134

Query: 206 CHFGNVRYNSSGVASRNLFSCVMRCLVKRLAEAQRKEKANREAAPIPEAYYDVCSWAITP 265
              GN+   +        F   M    +R+ + + K                  S  +T 
Sbjct: 135 -RIGNIFVPNDRYIE---FEKYMIPFFERVLKIEEK-----------------LSRPLTA 173

Query: 266 STLWYMAGLWMADIFTEALQETGEVTDEKVASEEGLKRAKSTVLYWAARNGVPIFSPSLT 325
           S   Y  G +M               DEK+  E+     + +V+YWA +N +PIF P++T
Sbjct: 174 SEFIYEMGRYM---------------DEKLGKEK-----EKSVIYWAYKNNIPIFCPAIT 213

Query: 326 DGDIMEFI-LTAGDTGVPLLQLDLVADIHRLNRLAMRSRRTGMMILGGGVVKHHVCNANL 384
           DG I + +     +     L +D+  DI +LN LA+ ++ T  +ILGG + KH + NANL
Sbjct: 214 DGSIGDMLYFFKEERRDSRLIIDIANDIVKLNNLAITAKETASIILGGSLPKHAIINANL 273

Query: 385 MRNGADYAVFLNNAQEFDGSDAGARPGEAVSWGKLRLDSTAVKVYSEVTIVFPLIVVHVF 444
            R G DYA++++ A  +DGS +GA P E VSWGK++  +  V+V+ + T++FP++V  V 
Sbjct: 274 FRGGTDYAIYISTAVPWDGSLSGAPPREGVSWGKIKAKADYVEVWGDATLIFPILVWMVM 333

Query: 445 VA 446
            A
Sbjct: 334 KA 335


>1ROZ-A nrPDB
          Length = 369

 Score =  356 bits (913), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 132/441 (29%), Positives = 190/441 (43%), Gaps = 99/441 (22%)

Query: 5   AKSAVLVSSCTDDLLGDAKQVVVGPNQEDLHSAEAVLNRYSTVGFQASNLARAFSICEMM 64
           A +AVL  S T   L      V G +     +  A+L  + T GFQA+N  RA      M
Sbjct: 13  ALAAVLKHSST---LPPESTQVRGYDFNRGVNYRALLEAFGTTGFQATNFGRAVQQVNAM 69

Query: 65  LTPQ-SPSPSLMPTEGDQASESPVMVQPTLFVGVTANLFGTGCREAIRFLCTECVPLPNG 123
           +  +  P         D       +   T+F+G T+NL  +G RE IR+L          
Sbjct: 70  IEKKLEPLSQDEDQHADLTQSRRPLTSCTIFLGYTSNLISSGIRETIRYLVQH------- 122

Query: 124 VEPATPLDDMAGISCDGTGALKPSPCDSRALIHVLVVSGGAMEHDIRRACESYKLSRDGA 183
                                         ++ VLV + G +E D+ +      L     
Sbjct: 123 -----------------------------NMVDVLVTTAGGVEEDLIKCLAPTYLG---- 149

Query: 184 EEEGEQFHHPVERDRSRSKGTDCHFGNVRYNSSGVASRNLFSCVMRCLVKRLAEAQRKEK 243
                     +     R  G +   GN+   +        F   +  ++ ++   Q  E 
Sbjct: 150 -------EFSLRGKELRENGIN-RIGNLLVPNENYCK---FEDWLMPILDQMVMEQNTEG 198

Query: 244 ANREAAPIPEAYYDVCSWAITPSTLWYMAGLWMADIFTEALQETGEVTDEKVASEEGLKR 303
                               TPS +                         ++  E     
Sbjct: 199 VKW-----------------TPSKMI-----------------------ARLGKE---IN 215

Query: 304 AKSTVLYWAARNGVPIFSPSLTDGDIMEFILTAGDTGVPLLQLDLVADIHRLNRLAMRSR 363
              +V YWA +N +P+FSP+LTDG + + I        P L LD+V D+  +N  A+ ++
Sbjct: 216 NPESVYYWAQKNHIPVFSPALTDGSLGDMIFFHSYKN-PGLVLDIVEDLRLINTQAIFAK 274

Query: 364 RTGMMILGGGVVKHHVCNANLMRNGADYAVFLNNAQEFDGSDAGARPGEAVSWGKLRLDS 423
            TGM+ILGGGVVKHH+ NANLMRNGADYAV++N AQEFDGSD+GARP EAVSWGK+R+D+
Sbjct: 275 CTGMIILGGGVVKHHIANANLMRNGADYAVYINTAQEFDGSDSGARPDEAVSWGKIRVDA 334

Query: 424 TAVKVYSEVTIVFPLIVVHVF 444
             VKVY++ ++VFPL+V   F
Sbjct: 335 QPVKVYADASLVFPLLVAETF 355


>6DFT-B nrPDB
          Length = 342

 Score =  262 bits (669), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 92/434 (21%), Positives = 151/434 (34%), Gaps = 123/434 (28%)

Query: 30  NQEDLHSAEAVLNRYSTVGFQASNLARAFSICEMMLTPQSPSPSLMPTEGDQASESPVMV 89
           N     +   VLN Y  +G +A+NL RA  I +  L                      M 
Sbjct: 21  NIGQEEAIRCVLNAYPNIGLEATNLGRARRIVQRAL------------------NDNGMD 62

Query: 90  QPTLFVGVTANLFGTGCREAIRFLCTECVPLPNGVEPATPLDDMAGISCDGTGALKPSPC 149
              + +  T+NL  +G R+    L  E                                 
Sbjct: 63  GNKVMLAYTSNLISSGLRDTFACLARE--------------------------------- 89

Query: 150 DSRALIHVLVVSGGAMEHDIRRACESYKLSRDGAEEEGEQFHHPVERDRSRSKGTDCHFG 209
                I  +V + G +E D+ +      +               +     R+ G +   G
Sbjct: 90  ---NRIGAVVTTAGGVEEDVIKCLGDTLVG-----------DFALNDHALRNNGLN-RVG 134

Query: 210 NVRYNSSGVASRNLFSCVMRCLVKRLAEAQRKEKANREAAPIPEAYYDVCSWAITPSTLW 269
           N+   +        F      L++RL E QR  +   +                TPS + 
Sbjct: 135 NLLVPNDNY---RNFEDFFVPLLRRLHEQQRDSRWTTKT---------------TPSQII 176

Query: 270 YMAGLWMADIFTEALQETGEVTDEKVASEEGLKRAKSTVLYWAARNGVPIFSPSLTDGDI 329
              G         A  E+    D             S+++YW  RN +P+FSP+ TDG +
Sbjct: 177 AEIG---------AALESVRPND-----------CGSSLIYWCYRNDIPVFSPAFTDGSM 216

Query: 330 MEFILTAGDTGVPLLQLDLVADIHRLNRLAMRSRRTGMM---ILGGGVVKHHVCNANLMR 386
            + I     +    L +D V D+ RL +L  +S   G +   +LG G+ KHH     L+R
Sbjct: 217 GDMIYFYNYSRKG-LVVDPVPDVRRLRQLGCKSTNVGRITCIVLGAGLPKHH-----LLR 270

Query: 387 N-GADYAVFLNNAQEFDGSDAGARPGEAVSWGKLRLDSTAVKVYSEVTIVFPLIVVHVFV 445
           N  AD  V++    + DG ++        + G L  +   V+V+ + TI+ PL++     
Sbjct: 271 NVQADAVVYVTTGSDADGCESSCNVMADRANGLLSPNCDVVRVHGDATIISPLLL----- 325

Query: 446 AWVRMMRSKGKENI 459
               +  S GKE +
Sbjct: 326 ----LRSSDGKEKV 335


>5E70-A nrPDB
          Length = 612

 Score = 35.6 bits (80), Expect = 0.041,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 53/152 (34%), Gaps = 20/152 (13%)

Query: 209 GNVRYNSSGVASRNLFSCVMRC--------LVKRLAEAQRKEKANREAAPIPEAYYDVCS 260
           GN+R  S   A    F   MR         L +++ + + ++KAN+  API      + S
Sbjct: 81  GNLRLKSDPYA----FEAQMRPETASLICGLPEKVVQTEERKKANQFDAPISIYEVHLGS 136

Query: 261 WAITPSTLWYMAGLWMADIFTEALQETGEVTDEKVASEEGLKRAKSTVLYWAARNGVPIF 320
           W       ++++   +AD      +  G    E +   E           W  +    ++
Sbjct: 137 WRRHTDNNFWLSYRELADQLVPYAKWMGFTHLELLPINEHPFDGS-----WGYQ-PTGLY 190

Query: 321 SPSLTDGDIMEFILTAGDTGVPLL--QLDLVA 350
           +P+   G   +F           L   LD V 
Sbjct: 191 APTRRFGTRDDFRYFIDAAHAAGLNVILDWVP 222


>3U5Z-B nrPDB
          Length = 324

 Score = 31.8 bits (70), Expect = 0.70,   Method: Composition-based stats.
 Identities = 43/226 (19%), Positives = 74/226 (32%), Gaps = 32/226 (14%)

Query: 159 VVSGGAMEHDIRRACESYKLSRDGAEEEGEQFHHPVERDRSRSKGTDCHFGNVRYNSSGV 218
           + S G + H I  +         G     +   H V  D     G+DC    VR   +  
Sbjct: 41  ITSKGKIPHIILHSPSP----GTGKTTVAKALCHDVNADMMFVNGSDCKIDFVRGPLTNF 96

Query: 219 ASRNLFSCVMRCLVKRLAEAQRKEKANREAAPIPEAYYDVCSWAITPSTLWYMAGLWMAD 278
           AS   F    + +V    +     ++ R      EAY   CS  IT + +    G+    
Sbjct: 97  ASAASFDGRQKVIVIDEFDRSGLAESQRHLRSFMEAYSSNCSIIITANNI---DGIIKPL 153

Query: 279 IFTEALQETGEVTDE--------------KVASEEGLKRAKSTVLYWAARNGVPIFSP-- 322
                +   G+ TDE              ++   EG+  A   V+    +   P F    
Sbjct: 154 QSRCRVITFGQPTDEDKIEMMKQMIRRLTEICKHEGIAIADMKVVAALVKKNFPDFRKTI 213

Query: 323 ----SLTDGDIMEFILTAGDTGVPLLQLDLVA-----DIHRLNRLA 359
               S +   +++  + +  T       D++      D+ +L  LA
Sbjct: 214 GELDSYSSKGVLDAGILSLVTNDRGAIDDVLESLKNKDVKQLRALA 259


>5VXY-A nrPDB
          Length = 144

 Score = 30.6 bits (67), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 27/69 (39%), Gaps = 2/69 (2%)

Query: 98  TANLFGTGCREAIR--FLCTECVPLPNGVEPATPLDDMAGISCDGTGALKPSPCDSRALI 155
           + N   T   EA+   +         +  +   PL   A  +  GT ALKP P D  A I
Sbjct: 39  SVNPLKTTVEEALSRGWSVKSGTGTEDATKKEVPLGVAADANKLGTIALKPDPADGTADI 98

Query: 156 HVLVVSGGA 164
            +    GGA
Sbjct: 99  TLTFTMGGA 107


>4XJR-A nrPDB
          Length = 454

 Score = 30.2 bits (66), Expect = 1.8,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 2/42 (4%)

Query: 70  PSPSL--MPTEGDQASESPVMVQPTLFVGVTANLFGTGCREA 109
           P P L  MPT  D    +P +V   L    T+NL   GC++ 
Sbjct: 52  PGPGLLAMPTTVDGCVRTPSLVINDLIYAYTSNLITRGCQDI 93


>1X6R-A nrPDB
          Length = 123

 Score = 30.2 bits (66), Expect = 2.0,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 27/69 (39%), Gaps = 2/69 (2%)

Query: 98  TANLFGTGCREAIR--FLCTECVPLPNGVEPATPLDDMAGISCDGTGALKPSPCDSRALI 155
           + N   T   EA+   +         +  +   PL   A  +  GT ALKP P D  A I
Sbjct: 18  SVNPLKTTVEEALSRGWSVKSGTGTEDATKKEVPLGVAADANKLGTIALKPDPADGTADI 77

Query: 156 HVLVVSGGA 164
            +    GGA
Sbjct: 78  TLTFTMGGA 86


>5AOO-B nrPDB
          Length = 370

 Score = 29.5 bits (64), Expect = 3.1,   Method: Composition-based stats.
 Identities = 21/100 (21%), Positives = 34/100 (34%), Gaps = 5/100 (5%)

Query: 30  NQEDLHSAEAVLNRYSTVGFQASNLARAFSICEMMLTPQSPSPSLMPTEGDQASESPVMV 89
            +     A       +  G  A+  A + +I   +  P +PS +  P     A       
Sbjct: 73  WEPAAARASESATDSAIEGIDAAGKAASKAITRKLDRPAAPSSTANPQPSLIALNPSATQ 132

Query: 90  QPTLFVGVTANLFGTGCREAIRFLCTECVPLPNGVEPATP 129
                 G  + L G+     + +     VPLPN  EP+ P
Sbjct: 133 S-----GNASILTGSTAPSLLAYPTATPVPLPNPDEPSQP 167


>5GKA-B nrPDB
          Length = 367

 Score = 29.5 bits (64), Expect = 3.2,   Method: Composition-based stats.
 Identities = 21/100 (21%), Positives = 34/100 (34%), Gaps = 5/100 (5%)

Query: 30  NQEDLHSAEAVLNRYSTVGFQASNLARAFSICEMMLTPQSPSPSLMPTEGDQASESPVMV 89
            +     A       +  G  A+  A + +I   +  P +PS +  P     A       
Sbjct: 70  WEPAAARASESATDSAIEGIDAAGKAASKAITRKLDRPAAPSSTANPQPSLIALNPSATQ 129

Query: 90  QPTLFVGVTANLFGTGCREAIRFLCTECVPLPNGVEPATP 129
                 G  + L G+     + +     VPLPN  EP+ P
Sbjct: 130 S-----GNASILTGSTAPSLLAYPTATPVPLPNPDEPSQP 164


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.310    0.117    0.297 

Lambda     K      H
   0.267   0.0349    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,713,471
Number of Sequences: 36641
Number of extensions: 524683
Number of successful extensions: 1252
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1207
Number of HSP's gapped (non-prelim): 35
length of query: 461
length of database: 10,336,785
effective HSP length: 100
effective length of query: 361
effective length of database: 6,672,685
effective search space: 2408839285
effective search space used: 2408839285
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.4 bits)
S2: 60 (28.0 bits)